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[package ]
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name = " fastq_set"
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- version = " 0.5.3"
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- authors = [
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- " Patrick Marks <patrick@10xgenomics.com>" ,
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- " Sreenath Krishnan <sreenath.krishnan@10xgenomics.com>" ,
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- ]
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- edition = " 2021"
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- license = " MIT"
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+ authors = [" 10x Genomics" ]
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description = " Utilities for reading groups of FASTQ files from different sequencing reads of the same library molecule. Encodes filename conventions used by `bcl2fastq` from Illumina"
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- repository = " https://github.com/10XGenomics/fastq_set"
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+ edition = " 2021"
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+ include = [" src/**/*" , " LICENSE.txt" , " README.md" ]
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keywords = [" bioinformatics" , " DNA" , " sequencing" ]
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+ license = " MIT"
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readme = " README.md"
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- include = [" src/**/*" , " LICENSE.txt" , " README.md" ]
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-
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+ repository = " https://github.com/10XGenomics/fastq_set"
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resolver = " 2"
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+ version = " 0.5.3"
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[dependencies ]
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- flate2 = { version = " ^1.0" , features = [" zlib" ], default-features = false }
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- serde_derive = " *"
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- serde = " *"
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- bytes = { version = " >=0.5, <2" , features = [" serde" ] }
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anyhow = { version = " 1" , features = [" backtrace" ] }
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- regex = { version = " 1 " , default-features = false , features = [ " std " , " perf " ] }
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- lazy_static = " 1"
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- rand = " >=0.7, <2 "
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- rand_xorshift = " >=0.2 "
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+ bio = " 2 "
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+ bytes = { version = " 1" , features = [ " serde " ] }
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+ fastq = " 0.6 "
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+ flate2 = { version = " 1 " , features = [ " zlib " ], default-features = false }
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itertools = " >=0.10,<0.13"
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- lz4 = " *"
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- fastq = " ^0.6"
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- bio = " >=0.33.0, <3"
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+ lazy_static = " 1"
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+ lz4 = " 1"
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+ rand = " >=0.7,<1"
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+ rand_xorshift = " >=0.2,<1"
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+ regex = { version = " 1" , default-features = false , features = [" std" , " perf" ] }
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+ serde = " 1"
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+ serde_derive = " 1"
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thiserror = " 1"
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[dev-dependencies ]
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- file_diff = " 1.0 "
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+ bincode = " 1"
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criterion = " 0.5"
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- bincode = " * "
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- libc = " >= 0.2"
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+ file_diff = " 1.0 "
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+ libc = " 0.2"
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pretty_assertions = " 1"
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- serde_json = " *"
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+ proptest = { version = " 1" , default-features = false , features = [" std" ] }
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+ serde_json = " 1"
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[[bench ]]
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name = " benchmarks"
@@ -46,8 +43,3 @@ harness = false
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[[bench ]]
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name = " array_bench"
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harness = false
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-
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- [dev-dependencies .proptest ]
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- version = " 1"
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- default-features = false
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- features = [" std" ]
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