diff --git a/SequenceAnalysis/src/org/labkey/sequenceanalysis/pipeline/AlignmentAnalysisJob.java b/SequenceAnalysis/src/org/labkey/sequenceanalysis/pipeline/AlignmentAnalysisJob.java
index a26f9c1ca..82cd77df9 100644
--- a/SequenceAnalysis/src/org/labkey/sequenceanalysis/pipeline/AlignmentAnalysisJob.java
+++ b/SequenceAnalysis/src/org/labkey/sequenceanalysis/pipeline/AlignmentAnalysisJob.java
@@ -54,7 +54,7 @@ private AlignmentAnalysisJob(Container c, User u, String jobName, PipeRoot root,
         _readsetId = model.getReadset();
 
         getLogger().debug("caching analysis for use on remote server: " + model.getRowId());
-        getSequenceSupport().cacheAnalysis(model, this);
+        getSequenceSupport().cacheAnalysis(model, this, true);
         writeSupportToDisk();
     }