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Update argument name
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bbimber committed Feb 18, 2025
1 parent 8d06837 commit 8193853
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion singlecell/resources/chunks/AppendNimble.R
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ for (datasetId in names(seuratObjects)) {
for (genomeId in names(nimbleGenomes)) {
maxAmbiguityAllowed <- nimbleGenomeAmbiguousPreference[[genomeId]]
replaceExistingAssayData <- replaceExistingAssayDataByGenome[[genomeId]]
seuratObj <- Rdiscvr::DownloadAndAppendNimble(seuratObject = seuratObj, allowableGenomes = genomeId, ensureSamplesShareAllGenomes = ensureSamplesShareAllGenomes, targetAssayName = nimbleGenomes[[genomeId]], enforceUniqueFeatureNames = TRUE, maxAmbiguityAllowed = maxAmbiguityAllowed, maxLibrarySizeRatio = maxLibrarySizeRatio, replaceExistingAssayData = replaceExistingAssayData)
seuratObj <- Rdiscvr::DownloadAndAppendNimble(seuratObj = seuratObj, allowableGenomes = genomeId, ensureSamplesShareAllGenomes = ensureSamplesShareAllGenomes, targetAssayName = nimbleGenomes[[genomeId]], enforceUniqueFeatureNames = TRUE, maxAmbiguityAllowed = maxAmbiguityAllowed, maxLibrarySizeRatio = maxLibrarySizeRatio, replaceExistingAssayData = replaceExistingAssayData)
}

saveData(seuratObj, datasetId)
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