From 81938535a79dc00a47a72e5705c6418f79ebec81 Mon Sep 17 00:00:00 2001 From: bbimber Date: Tue, 18 Feb 2025 10:20:51 -0800 Subject: [PATCH] Update argument name --- singlecell/resources/chunks/AppendNimble.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/singlecell/resources/chunks/AppendNimble.R b/singlecell/resources/chunks/AppendNimble.R index 9812f6896..d2fd17348 100644 --- a/singlecell/resources/chunks/AppendNimble.R +++ b/singlecell/resources/chunks/AppendNimble.R @@ -19,7 +19,7 @@ for (datasetId in names(seuratObjects)) { for (genomeId in names(nimbleGenomes)) { maxAmbiguityAllowed <- nimbleGenomeAmbiguousPreference[[genomeId]] replaceExistingAssayData <- replaceExistingAssayDataByGenome[[genomeId]] - seuratObj <- Rdiscvr::DownloadAndAppendNimble(seuratObject = seuratObj, allowableGenomes = genomeId, ensureSamplesShareAllGenomes = ensureSamplesShareAllGenomes, targetAssayName = nimbleGenomes[[genomeId]], enforceUniqueFeatureNames = TRUE, maxAmbiguityAllowed = maxAmbiguityAllowed, maxLibrarySizeRatio = maxLibrarySizeRatio, replaceExistingAssayData = replaceExistingAssayData) + seuratObj <- Rdiscvr::DownloadAndAppendNimble(seuratObj = seuratObj, allowableGenomes = genomeId, ensureSamplesShareAllGenomes = ensureSamplesShareAllGenomes, targetAssayName = nimbleGenomes[[genomeId]], enforceUniqueFeatureNames = TRUE, maxAmbiguityAllowed = maxAmbiguityAllowed, maxLibrarySizeRatio = maxLibrarySizeRatio, replaceExistingAssayData = replaceExistingAssayData) } saveData(seuratObj, datasetId)