From 6f61e242e53980651a4e03b4cbb3c395300f47c8 Mon Sep 17 00:00:00 2001 From: Alexandru Mahmoud Date: Wed, 31 Jul 2024 11:31:15 -0400 Subject: [PATCH] Add tinytex to Dockerfile --- Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Dockerfile b/Dockerfile index 5d2d439..32a1388 100644 --- a/Dockerfile +++ b/Dockerfile @@ -6,7 +6,7 @@ COPY --chown=shiny:shiny . /tmp/repo/ USER shiny -RUN cd /tmp/repo && Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); BiocManager::install(ask=FALSE)" && Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); devtools::install('.', dependencies=TRUE, build_vignettes=TRUE, repos = BiocManager::repositories())" && rm -rf /tmp/repo +RUN cd /tmp/repo && Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); BiocManager::install(ask=FALSE)" && Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); devtools::install('.', dependencies=TRUE, build_vignettes=TRUE, repos = BiocManager::repositories()); tinytex::install_tinytex()" && rm -rf /tmp/repo COPY --chown=shiny:shiny app.R /srv/shiny-server/biocshiny/app.R