missing dependencies

[dwr-psandhu]

• schimpy version: 1.4.3
• Python version: 3.9
• Operating System: windows

Description

Dependencies not specified fully in setup.py

What I Did

pip install schimpy

then

import schimpy
from schimpy import schism_mesh

[dwr-psandhu]

So far
rtree and gdal are missing.

These show up with the above imports

[kjnam]

It is a known issue, and it will be resolved while we are upgrading dependencies. The current dependencies settings are outdated.

[water-e]

We've re-done the depenencies. I do see direct imports of rtree. Could that have slipped through the cracks, perhaps because it is included with other packages indirectly (I think we shouldn't rely on that for our own direct imports). I'd like to close out the issue unless there is a complication. Any issue with just adding rtree to setup.py?

[kjnam]

@water-e I need to look into it. We are moving a similar RTree that Shapely v2 uses, so it is removed from the dependency list.

[dwr-psandhu]

one more missing dependency while we are at it.
dms-datastore is imported in batch_metrics.py but is not listed in setup.py