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Phototransduction

Code to reproduce the simulations and figures for manuscript "A hybrid stochastic/deterministic model of single photon response and light adaptation in mouse rods." by C. Beelen, S. Asteriti, L. Cangiano, K.-W. Koch and D. Dell'Orco, Manuscript link

Requirements to run the simulations:

  • MATLAB (at least R2018A for the “lowpass” function)
  • Signal Processing Toolbox (Matlab)
  • Statistics and Machine Learning Toolbox (Matlab)
  • IQMtools

More details on the simulations and results can be found in my dissertation! Link to the PDF