Skip to content
This repository has been archived by the owner on Mar 1, 2023. It is now read-only.

Commit

Permalink
Merge #518
Browse files Browse the repository at this point in the history 
518: Add direct column solves r=simonbyrne a=lcw



Co-authored-by: Jeremy E Kozdon <jekozdon@nps.edu>
Co-authored-by: Simon Byrne <simonbyrne@gmail.com>
Co-authored-by: Lucas C Wilcox <lucas@swirlee.com>
  • Loading branch information
@bors @simonbyrne @lcw
4 people authored Nov 16, 2019
2 parents c39a7f3 + c967fbd commit 5f2f29e
Show file tree
Hide file tree
Showing 19 changed files with 1,533 additions and 169 deletions.
2 changes: 2 additions & 0 deletions azure-pipelines.yml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -120,6 +120,8 @@ jobs:
- job: Documentation

timeoutInMinutes: 60

pool:
vmImage: 'ubuntu-16.04'

Expand Down
165 changes: 69 additions & 96 deletions docs/Manifest.toml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -26,9 +26,9 @@ version = "1.2.1"

[[BandedMatrices]]
deps = ["FillArrays", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "Random", "SparseArrays"]
git-tree-sha1 = "cdda54b29a1c52fa33defc0c61e3b8bb61f73d15"
git-tree-sha1 = "98412ac667364be42033ea60a760bceb158e8453"
uuid = "aae01518-5342-5314-be14-df237901396f"
version = "0.10.1"
version = "0.13.0"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
Expand All @@ -40,22 +40,10 @@ uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee"
version = "0.8.10"

[[BinaryProvider]]
deps = ["Libdl", "Logging", "SHA"]
git-tree-sha1 = "c7361ce8a2129f20b0e05a89f7070820cfed6648"
deps = ["Libdl", "SHA"]
git-tree-sha1 = "5b08ed6036d9d3f0ee6369410b830f8873d4024c"
uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
version = "0.5.6"

[[BlockArrays]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "a36887ddaaf66b8f5bd017871f239247aa6f459f"
uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e"
version = "0.9.1"

[[BlockBandedMatrices]]
deps = ["BandedMatrices", "BlockArrays", "Distributed", "FillArrays", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "Pkg", "Profile", "Random", "SharedArrays", "SparseArrays", "Statistics", "Test"]
git-tree-sha1 = "52a3f347579a93ca4131ec2f6fd298ffde0deccb"
uuid = "ffab5731-97b5-5995-9138-79e8c1846df0"
version = "0.4.6"
version = "0.5.8"

[[BoundaryValueDiffEq]]
deps = ["BandedMatrices", "DiffEqBase", "DiffEqDiffTools", "ForwardDiff", "LinearAlgebra", "NLsolve", "Reexport", "SparseArrays"]
Expand All @@ -69,12 +57,6 @@ path = ".."
uuid = "777c4786-024f-11e9-21a3-85d5d4106250"
version = "0.1.0"

[[CSTParser]]
deps = ["Tokenize"]
git-tree-sha1 = "c69698c3d4a7255bc1b4bc2afc09f59db910243b"
uuid = "00ebfdb7-1f24-5e51-bd34-a7502290713f"
version = "0.6.2"

[[Calculus]]
deps = ["Compat"]
git-tree-sha1 = "bd8bbd105ba583a42385bd6dc4a20dad8ab3dc11"
Expand Down Expand Up @@ -135,19 +117,19 @@ version = "1.1.0"

[[DataStructures]]
deps = ["InteractiveUtils", "OrderedCollections"]
git-tree-sha1 = "2103e504f427e54ffa19af9ada225733a21f951f"
git-tree-sha1 = "1fe8fad5fc84686dcbc674aa255bc867a64f8132"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.17.3"
version = "0.17.5"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DelayDiffEq]]
deps = ["DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Roots"]
git-tree-sha1 = "540fa7eb55057ffd8b6687584d2ab273aae4d189"
git-tree-sha1 = "afa98d9b36df419dbf9586e8f3aa0bf1f4f7cf1d"
uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb"
version = "5.16.0"
version = "5.18.0"

[[DelimitedFiles]]
deps = ["Mmap"]
Expand All @@ -161,21 +143,21 @@ version = "0.4.1"

[[DiffEqBase]]
deps = ["ArrayInterface", "Compat", "DiffEqDiffTools", "Distributed", "DocStringExtensions", "FunctionWrappers", "IterativeSolvers", "IteratorInterfaceExtensions", "LinearAlgebra", "MuladdMacro", "Parameters", "Printf", "RecipesBase", "RecursiveArrayTools", "RecursiveFactorization", "Requires", "Roots", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "TableTraits", "TreeViews"]
git-tree-sha1 = "a7ab2f4c083745d6ab0825180365cc1e424ec03e"
git-tree-sha1 = "05a10ee594cc6a810b3c0e337b6b61405f387ef3"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.4.1"
version = "6.4.2"

[[DiffEqCallbacks]]
deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "NLsolve", "OrdinaryDiffEq", "RecipesBase", "RecursiveArrayTools", "StaticArrays"]
git-tree-sha1 = "307eda7b109cf1f236fbbb19976562146af386e1"
deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "NLsolve", "OrdinaryDiffEq", "RecipesBase", "RecursiveArrayTools", "StaticArrays"]
git-tree-sha1 = "0cb6b3481df064100cf6a2f3c457e7e024edb9e9"
uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
version = "2.8.0"
version = "2.9.0"

[[DiffEqDiffTools]]
deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"]
git-tree-sha1 = "21b855cb29ec4594f9651e0e9bdc0cdcfdcd52c1"
git-tree-sha1 = "81edfb3a8b55154772bb6080b5db40868e1778ed"
uuid = "01453d9d-ee7c-5054-8395-0335cb756afa"
version = "1.3.0"
version = "1.4.0"

[[DiffEqFinancial]]
deps = ["DiffEqBase", "DiffEqNoiseProcess", "LinearAlgebra", "Markdown", "RandomNumbers"]
Expand Down Expand Up @@ -208,10 +190,10 @@ uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5"
version = "0.0.4"

[[DiffRules]]
deps = ["Random", "Test"]
git-tree-sha1 = "dc0869fb2f5b23466b32ea799bd82c76480167f7"
deps = ["NaNMath", "Random", "SpecialFunctions"]
git-tree-sha1 = "f734b5f6bc9c909027ef99f6d91d5d9e4b111eed"
uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
version = "0.0.10"
version = "0.1.0"

[[DifferentialEquations]]
deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqFinancial", "DiffEqJump", "DiffEqNoiseProcess", "DiffEqPhysics", "DimensionalPlotRecipes", "LinearAlgebra", "MultiScaleArrays", "OrdinaryDiffEq", "Random", "RecursiveArrayTools", "Reexport", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"]
Expand All @@ -237,9 +219,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]]
deps = ["LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"]
git-tree-sha1 = "b419fcf95ef9c8cf4d6610cd323890ad66d64240"
git-tree-sha1 = "ce189b71fac635d6ec9582dc0f208887db25e6d3"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.21.3"
version = "0.21.8"

[[DocStringExtensions]]
deps = ["LibGit2", "Markdown", "Pkg", "Test"]
Expand Down Expand Up @@ -279,20 +261,20 @@ version = "0.2.3"

[[FillArrays]]
deps = ["LinearAlgebra", "Random", "SparseArrays"]
git-tree-sha1 = "8fba6ddaf66b45dec830233cea0aae43eb1261ad"
git-tree-sha1 = "de38b0253ade98340fabaf220f368f6144541938"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "0.6.4"
version = "0.7.4"

[[FixedPointNumbers]]
git-tree-sha1 = "d14a6fa5890ea3a7e5dcab6811114f132fec2b4b"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.6.1"

[[ForwardDiff]]
deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "InteractiveUtils", "LinearAlgebra", "NaNMath", "Random", "SparseArrays", "SpecialFunctions", "StaticArrays", "Test"]
git-tree-sha1 = "4c4d727f1b7e0092134fabfab6396b8945c1ea5b"
deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "NaNMath", "Random", "SpecialFunctions", "StaticArrays"]
git-tree-sha1 = "4407e7b76999eca2646abdb68203bd4302476168"
uuid = "f6369f11-7733-5829-9624-2563aa707210"
version = "0.10.3"
version = "0.10.6"

[[FunctionWrappers]]
deps = ["Compat"]
Expand All @@ -308,9 +290,9 @@ version = "0.2.9"

[[GR]]
deps = ["Base64", "DelimitedFiles", "LinearAlgebra", "Pkg", "Printf", "Random", "Serialization", "Sockets", "Test"]
git-tree-sha1 = "b4c31b6377b6d51b6c69a3a9737d10c34d43974e"
git-tree-sha1 = "2b29ed254586324366e43f4283880978e6956d1f"
uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71"
version = "0.41.0"
version = "0.42.0"

[[GaussQuadrature]]
deps = ["LinearAlgebra", "Printf", "SpecialFunctions", "Test"]
Expand Down Expand Up @@ -338,9 +320,9 @@ version = "0.7.6"

[[HTTP]]
deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"]
git-tree-sha1 = "f1e1b417a34cf73a70cbed919915bf8f8bad1806"
git-tree-sha1 = "5c49dab19938b119fe204fd7d7e8e174f4e9c68b"
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
version = "0.8.6"
version = "0.8.8"

[[Inflate]]
deps = ["Pkg", "Printf", "Random", "Test"]
Expand Down Expand Up @@ -388,9 +370,9 @@ version = "1.0.3"

[[LazyArrays]]
deps = ["FillArrays", "LinearAlgebra", "MacroTools", "StaticArrays"]
git-tree-sha1 = "e71f611fec1329f0fd6c82e9b5d7da3fc9822b0d"
git-tree-sha1 = "01ec151cd0418fb05294b0230471765e0a65adb1"
uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02"
version = "0.10.0"
version = "0.12.3"

[[LibGit2]]
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
Expand Down Expand Up @@ -432,25 +414,25 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MPI]]
deps = ["Distributed", "Libdl", "Random", "Requires", "Serialization", "Sockets"]
git-tree-sha1 = "1493102ae15bdbb2f98a5c27fb659528865ec1ba"
git-tree-sha1 = "958dff41198353e1aa1092efa911c07cbd894193"
uuid = "da04e1cc-30fd-572f-bb4f-1f8673147195"
version = "0.10.0"
version = "0.10.1"

[[MacroTools]]
deps = ["CSTParser", "Compat", "DataStructures", "Test", "Tokenize"]
git-tree-sha1 = "d6e9dedb8c92c3465575442da456aec15a89ff76"
deps = ["Compat", "DataStructures", "Test"]
git-tree-sha1 = "82921f0e3bde6aebb8e524efc20f4042373c0c06"
uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
version = "0.5.1"
version = "0.5.2"

[[Markdown]]
deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[MatrixFactorizations]]
deps = ["LinearAlgebra", "Random", "Test"]
git-tree-sha1 = "95ed2db8197ef7eadce558dff0e9595169672aee"
git-tree-sha1 = "42f7931fac4068709a8412d3766e9a2bfc91e451"
uuid = "a3b82374-2e81-5b9e-98ce-41277c0e4c87"
version = "0.1.0"
version = "0.2.0"

[[MbedTLS]]
deps = ["BinaryProvider", "Dates", "Libdl", "Random", "Sockets"]
Expand Down Expand Up @@ -493,9 +475,9 @@ version = "7.5.0"

[[NLsolve]]
deps = ["DiffEqDiffTools", "Distances", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "Printf", "Reexport"]
git-tree-sha1 = "c9578878f56f425a2160f5b436c7f79a154d154c"
git-tree-sha1 = "be25a8486c7be4b075165315e201fa5d199073f1"
uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56"
version = "4.1.0"
version = "4.2.0"

[[NaNMath]]
deps = ["Compat"]
Expand All @@ -510,10 +492,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.1.0"

[[OrdinaryDiffEq]]
deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqDiffTools", "ExponentialUtilities", "ForwardDiff", "GenericSVD", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "NLsolve", "Parameters", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays"]
git-tree-sha1 = "edba563991b482ecd962cfe8a7c9b5a4fcf9b71a"
deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqDiffTools", "ExponentialUtilities", "ForwardDiff", "GenericSVD", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Parameters", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays"]
git-tree-sha1 = "d7be23057a7bc3cc7574633108dd4c744c94539a"
uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
version = "5.17.2"
version = "5.20.1"

[[PDMats]]
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"]
Expand All @@ -529,9 +511,9 @@ version = "0.12.0"

[[Parsers]]
deps = ["Dates", "Test"]
git-tree-sha1 = "ef0af6c8601db18c282d092ccbd2f01f3f0cd70b"
git-tree-sha1 = "c56ecb484f286639f161e712b8311f5ab77e8d32"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "0.3.7"
version = "0.3.8"

[[Pkg]]
deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
Expand All @@ -545,9 +527,9 @@ version = "0.4.0"

[[PlotUtils]]
deps = ["Colors", "Dates", "Printf", "Random", "Reexport"]
git-tree-sha1 = "259a8d3399ea7ba23553aa91eafdf0640f5199f1"
git-tree-sha1 = "7622cbde3200a9876a14ba85d66f25d7f4e7a6ca"
uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043"
version = "0.6.0"
version = "0.6.1"

[[Plots]]
deps = ["Base64", "Contour", "Dates", "FFMPEG", "FixedPointNumbers", "GR", "GeometryTypes", "JSON", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "Reexport", "Requires", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs"]
Expand All @@ -563,23 +545,19 @@ version = "0.4.0"

[[Polynomials]]
deps = ["LinearAlgebra", "RecipesBase"]
git-tree-sha1 = "f7c0c07e82798aef542d60a6e6e85e39f4590750"
git-tree-sha1 = "ae71c2329790af97b7682b11241b3609e4d48626"
uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
version = "0.5.3"
version = "0.6.0"

[[Printf]]
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[Profile]]
deps = ["Printf"]
uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79"

[[QuadGK]]
deps = ["DataStructures", "LinearAlgebra", "Test"]
git-tree-sha1 = "3ce467a8e76c6030d4c3786e7d3a73442017cdc0"
deps = ["DataStructures", "LinearAlgebra"]
git-tree-sha1 = "1af46bf083b9630a5b27d4fd94f496c5fca642a8"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.0.3"
version = "2.1.1"

[[Quadmath]]
deps = ["Printf", "Random", "Requires"]
Expand Down Expand Up @@ -637,10 +615,10 @@ uuid = "ae5879a3-cd67-5da8-be7f-38c6eb64a37b"
version = "0.6.0"

[[Rmath]]
deps = ["BinaryProvider", "Libdl", "Random", "Statistics", "Test"]
git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9"
deps = ["BinaryProvider", "Libdl", "Random", "Statistics"]
git-tree-sha1 = "9825383d3453f4606d77f0a5722495f38001c09e"
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
version = "0.5.0"
version = "0.5.1"

[[Roots]]
deps = ["Printf"]
Expand Down Expand Up @@ -684,16 +662,16 @@ deps = ["LinearAlgebra", "Random"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[SparseDiffTools]]
deps = ["Adapt", "ArrayInterface", "BandedMatrices", "BlockBandedMatrices", "DataStructures", "DiffEqDiffTools", "ForwardDiff", "LightGraphs", "LinearAlgebra", "Requires", "SparseArrays", "VertexSafeGraphs"]
git-tree-sha1 = "c1c5fee07ff2d640aa132c777e89d0fdd6c9e777"
deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqDiffTools", "ForwardDiff", "LightGraphs", "LinearAlgebra", "Requires", "SparseArrays", "VertexSafeGraphs"]
git-tree-sha1 = "77083200046ca5c56a6aca9a9b6f5af240a1b419"
uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804"
version = "0.9.1"
version = "0.10.3"

[[SpecialFunctions]]
deps = ["BinDeps", "BinaryProvider", "Libdl", "Test"]
git-tree-sha1 = "0b45dc2e45ed77f445617b99ff2adf0f5b0f23ea"
deps = ["BinDeps", "BinaryProvider", "Libdl"]
git-tree-sha1 = "3bdd374b6fd78faf0119b8c5d538788dbf910c6e"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "0.7.2"
version = "0.8.0"

[[StaticArrays]]
deps = ["LinearAlgebra", "Random", "Statistics"]
Expand All @@ -712,10 +690,10 @@ uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.32.0"

[[StatsFuns]]
deps = ["Rmath", "SpecialFunctions", "Test"]
git-tree-sha1 = "b3a4e86aa13c732b8a8c0ba0c3d3264f55e6bb3e"
deps = ["Rmath", "SpecialFunctions"]
git-tree-sha1 = "67745a79d8e83a83737a7e17a383c54720a97f41"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "0.8.0"
version = "0.9.0"

[[SteadyStateDiffEq]]
deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport"]
Expand All @@ -725,19 +703,19 @@ version = "1.5.0"

[[StochasticDiffEq]]
deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqDiffTools", "DiffEqNoiseProcess", "FillArrays", "ForwardDiff", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "Parameters", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays"]
git-tree-sha1 = "5c88268c5fc5d187d542ab07bd1a8966d1b4687b"
git-tree-sha1 = "241afdb61a9da201c70dd7a6d92a91f11140ba75"
uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0"
version = "6.11.2"
version = "6.12.0"

[[SuiteSparse]]
deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"]
uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"

[[Sundials]]
deps = ["BinaryProvider", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "e137390db0377d3b9ccd9d019b0c26da0631d8d5"
git-tree-sha1 = "b4e54716bc2af6cc6f55f5573f35add012bed529"
uuid = "c3572dad-4567-51f8-b174-8c6c989267f4"
version = "3.7.0"
version = "3.8.0"

[[TableTraits]]
deps = ["IteratorInterfaceExtensions"]
Expand All @@ -749,11 +727,6 @@ version = "1.0.0"
deps = ["Distributed", "InteractiveUtils", "Logging", "Random"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[Tokenize]]
git-tree-sha1 = "dfcdbbfb2d0370716c815cbd6f8a364efb6f42cf"
uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
version = "0.5.6"

[[TranscodingStreams]]
deps = ["Random", "Test"]
git-tree-sha1 = "7c53c35547de1c5b9d46a4797cf6d8253807108c"
Expand Down
Loading

0 comments on commit 5f2f29e

Please sign in to comment.