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  • St. Jude Children's Research Hospital

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Achievement: Pull Shark

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@stjude @abyzovlab

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  1. LongAGE Public

    LongAGE: a memory-efficient implementation of Alignment with Gap Excision (AGE)

    C++ 5 1

  2. Indel-Analysis Public

    Analysis of optimal alignments unfolds bias in existing variant profiles (BMC Bioinformatics 2016)

    Python

  3. Unknown-Bacteria-Hunter Public

    Using 16S rRNA Genes as Markers to Detect Unknown Bacteria in Microbial Communities (BMC Bioinformatics 2017)

    Python

  4. abyzovlab/CNVpytor Public

    a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

    Python 200 29

  5. wwylab/MuSE Public

    Somatic point mutation caller

    C++ 28 9

  6. stjude/SVIndelGenotyper Public

    Analysis of error profiles of Indels and structural variants in deep sequencing data

    Python