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@DigitalSlideArchive

Digital Slide Archive

Tools for the management, visualization, and analysis of digital pathology data.

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  1. digital_slide_archive digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    Python 112 52

  2. HistomicsTK HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    Python 410 117

  3. HistomicsUI HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    JavaScript 64 22

Repositories

Showing 10 of 36 repositories
  • digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    DigitalSlideArchive/digital_slide_archive’s past year of commit activity
    Python 112 Apache-2.0 52 29 0 Updated Feb 25, 2025
  • ImageDePHI Public
    DigitalSlideArchive/ImageDePHI’s past year of commit activity
    Python 8 Apache-2.0 0 17 1 Updated Feb 25, 2025
  • HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    DigitalSlideArchive/HistomicsTK’s past year of commit activity
    Python 410 Apache-2.0 117 22 1 Updated Feb 25, 2025
  • dive-dsa Public

    DIVE for Digital Slide Archive

    DigitalSlideArchive/dive-dsa’s past year of commit activity
    Vue 1 Apache-2.0 0 8 3 Updated Feb 20, 2025
  • girder_assetstore Public

    A Girder plugin for connecting remote Girder instances as Assetstores

    DigitalSlideArchive/girder_assetstore’s past year of commit activity
    Python 0 0 4 0 Updated Feb 19, 2025
  • DSA-WSI-DeID Public

    A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.

    DigitalSlideArchive/DSA-WSI-DeID’s past year of commit activity
    Python 15 Apache-2.0 8 15 0 Updated Feb 19, 2025
  • wsi-superpixel-guided-labeling Public
    DigitalSlideArchive/wsi-superpixel-guided-labeling’s past year of commit activity
    Vue 3 6 30 1 Updated Feb 18, 2025
  • girder_volview Public
    DigitalSlideArchive/girder_volview’s past year of commit activity
    Python 3 2 5 0 Updated Feb 14, 2025
  • HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    DigitalSlideArchive/HistomicsUI’s past year of commit activity
    JavaScript 64 Apache-2.0 22 49 1 Updated Feb 13, 2025
  • large-image-utilities Public

    Experimental utilities for use with large_image

    DigitalSlideArchive/large-image-utilities’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Feb 4, 2025
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