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Issue 46774: Remove Ruminex package references from Luminex transform script #578

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merged 16 commits into from
Feb 9, 2023

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@cnathe cnathe commented Feb 8, 2023

Rationale

https://www.labkey.org/home/Developer/issues/issues-details.view?issueId=46774

The Ruminex package is no longer maintained and the EC50 5PL generated curve fits have never actually been used by the clients, so we are removing support for this package in our standard labkey_luminex_transform.R assay transform script. This PR also updates the Levey-Jennings report so that it checks if curve fit data exists for 4PL and 5PL curve types, and if not, hides the data columns and UI elements related to those EC50 values.

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Changes

  • Remove Ruminex package usage and calculations from labkey_luminex_transform.R
  • Remove Ruminex related props from Luminex test assay configurations and validation checks
  • Hide EC50 4PL/5PL related columns and guide set inputs for Levey-Jennings report if curve fit data not present

@cnathe cnathe merged commit 12c121b into develop Feb 9, 2023
@cnathe cnathe deleted the fb_removeRuminex branch February 9, 2023 21:38
@cnathe cnathe linked an issue Feb 13, 2023 that may be closed by this pull request
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labkey-tchad pushed a commit that referenced this pull request Feb 24, 2023
… script (#578)

- Remove Ruminex package usage and calculations from labkey_luminex_transform.R
- Remove Ruminex related props from Luminex test assay configurations and validation checks
- Hide EC50 4PL/5PL related columns and guide set inputs for Levey-Jennings report if curve fit data not present
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Issue 47237: Reenable support for the Luminex module on SQL Server
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