Skip to content

Commit 3b3666f

Browse files
author
github-actions
committed
deploy: 00f1d8e
1 parent f84a17b commit 3b3666f

30 files changed

+908
-908
lines changed

.doctrees/environment.pickle

2.38 KB
Binary file not shown.

.doctrees/mdakits.doctree

-1 Bytes
Binary file not shown.

MDANCE.html

+22-22
Original file line numberDiff line numberDiff line change
@@ -41,8 +41,8 @@
4141
<link rel="author" title="About these documents" href="about.html" />
4242
<link rel="index" title="Index" href="genindex.html" />
4343
<link rel="search" title="Search" href="search.html" />
44-
<link rel="next" title="mdahole2" href="mdahole2.html" />
45-
<link rel="prev" title="transport-analysis" href="transport-analysis.html" />
44+
<link rel="next" title="domhmm" href="domhmm.html" />
45+
<link rel="prev" title="maicos" href="maicos.html" />
4646
</head>
4747

4848
<body class="wy-body-for-nav">
@@ -85,34 +85,34 @@
8585
<p class="caption" role="heading"><span class="caption-text">MDAKit Registry</span></p>
8686
<ul class="current">
8787
<li class="toctree-l1 current"><a class="reference internal" href="mdakits.html">Registry of MDAnalysis Toolkits (MDAKits)</a><ul class="current">
88+
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
89+
<li class="toctree-l2"><a class="reference internal" href="lipidorderkit.html">lipidorderkit</a></li>
90+
<li class="toctree-l2"><a class="reference internal" href="PathSimAnalysis.html">PathSimAnalysis</a></li>
91+
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
92+
<li class="toctree-l2"><a class="reference internal" href="mda-tui.html">mda-tui</a></li>
8893
<li class="toctree-l2"><a class="reference internal" href="mdaencore.html">mdaencore</a></li>
89-
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
90-
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
91-
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
92-
<li class="toctree-l2"><a class="reference internal" href="OpenMMDL.html">OpenMMDL</a></li>
93-
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
94-
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
95-
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
9694
<li class="toctree-l2"><a class="reference internal" href="membrane-curvature.html">membrane-curvature</a></li>
97-
<li class="toctree-l2"><a class="reference internal" href="lipidorderkit.html">lipidorderkit</a></li>
98-
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
95+
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
9996
<li class="toctree-l2"><a class="reference internal" href="transport-analysis.html">transport-analysis</a></li>
97+
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
98+
<li class="toctree-l2"><a class="reference internal" href="MDonatello.html">MDonatello</a></li>
99+
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
100+
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
101+
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
102+
<li class="toctree-l2"><a class="reference internal" href="pytim.html">pytim</a></li>
103+
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
100104
<li class="toctree-l2 current"><a class="current reference internal" href="#">MDANCE</a><ul>
101105
<li class="toctree-l3"><a class="reference internal" href="#installation-instructions">Installation instructions</a></li>
102106
</ul>
103107
</li>
104-
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
105-
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
106-
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
107108
<li class="toctree-l2"><a class="reference internal" href="domhmm.html">domhmm</a></li>
109+
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
108110
<li class="toctree-l2"><a class="reference internal" href="solvation-analysis.html">solvation-analysis</a></li>
111+
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
109112
<li class="toctree-l2"><a class="reference internal" href="ProLIF.html">ProLIF</a></li>
110-
<li class="toctree-l2"><a class="reference internal" href="PathSimAnalysis.html">PathSimAnalysis</a></li>
111-
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
112-
<li class="toctree-l2"><a class="reference internal" href="mda-tui.html">mda-tui</a></li>
113-
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
114-
<li class="toctree-l2"><a class="reference internal" href="MDonatello.html">MDonatello</a></li>
115-
<li class="toctree-l2"><a class="reference internal" href="pytim.html">pytim</a></li>
113+
<li class="toctree-l2"><a class="reference internal" href="OpenMMDL.html">OpenMMDL</a></li>
114+
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
115+
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
116116
</ul>
117117
</li>
118118
</ul>
@@ -194,8 +194,8 @@ <h2>Installation instructions<a class="headerlink" href="#installation-instructi
194194
</div>
195195
</div>
196196
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
197-
<a href="transport-analysis.html" class="btn btn-neutral float-left" title="transport-analysis" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
198-
<a href="mdahole2.html" class="btn btn-neutral float-right" title="mdahole2" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
197+
<a href="maicos.html" class="btn btn-neutral float-left" title="maicos" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
198+
<a href="domhmm.html" class="btn btn-neutral float-right" title="domhmm" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
199199
</div>
200200

201201
<hr/>

MDonatello.html

+24-24
Original file line numberDiff line numberDiff line change
@@ -41,8 +41,8 @@
4141
<link rel="author" title="About these documents" href="about.html" />
4242
<link rel="index" title="Index" href="genindex.html" />
4343
<link rel="search" title="Search" href="search.html" />
44-
<link rel="next" title="pytim" href="pytim.html" />
45-
<link rel="prev" title="openmm-mdanalysis-reporter" href="openmm-mdanalysis-reporter.html" />
44+
<link rel="next" title="lipyds" href="lipyds.html" />
45+
<link rel="prev" title="mdakit-sasa" href="mdakit-sasa.html" />
4646
</head>
4747

4848
<body class="wy-body-for-nav">
@@ -85,34 +85,34 @@
8585
<p class="caption" role="heading"><span class="caption-text">MDAKit Registry</span></p>
8686
<ul class="current">
8787
<li class="toctree-l1 current"><a class="reference internal" href="mdakits.html">Registry of MDAnalysis Toolkits (MDAKits)</a><ul class="current">
88-
<li class="toctree-l2"><a class="reference internal" href="mdaencore.html">mdaencore</a></li>
89-
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
90-
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
91-
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
92-
<li class="toctree-l2"><a class="reference internal" href="OpenMMDL.html">OpenMMDL</a></li>
93-
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
94-
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
95-
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
96-
<li class="toctree-l2"><a class="reference internal" href="membrane-curvature.html">membrane-curvature</a></li>
88+
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
9789
<li class="toctree-l2"><a class="reference internal" href="lipidorderkit.html">lipidorderkit</a></li>
98-
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
99-
<li class="toctree-l2"><a class="reference internal" href="transport-analysis.html">transport-analysis</a></li>
100-
<li class="toctree-l2"><a class="reference internal" href="MDANCE.html">MDANCE</a></li>
101-
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
102-
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
103-
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
104-
<li class="toctree-l2"><a class="reference internal" href="domhmm.html">domhmm</a></li>
105-
<li class="toctree-l2"><a class="reference internal" href="solvation-analysis.html">solvation-analysis</a></li>
106-
<li class="toctree-l2"><a class="reference internal" href="ProLIF.html">ProLIF</a></li>
10790
<li class="toctree-l2"><a class="reference internal" href="PathSimAnalysis.html">PathSimAnalysis</a></li>
108-
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
91+
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
10992
<li class="toctree-l2"><a class="reference internal" href="mda-tui.html">mda-tui</a></li>
110-
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
93+
<li class="toctree-l2"><a class="reference internal" href="mdaencore.html">mdaencore</a></li>
94+
<li class="toctree-l2"><a class="reference internal" href="membrane-curvature.html">membrane-curvature</a></li>
95+
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
96+
<li class="toctree-l2"><a class="reference internal" href="transport-analysis.html">transport-analysis</a></li>
97+
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
11198
<li class="toctree-l2 current"><a class="current reference internal" href="#">MDonatello</a><ul>
11299
<li class="toctree-l3"><a class="reference internal" href="#installation-instructions">Installation instructions</a></li>
113100
</ul>
114101
</li>
102+
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
103+
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
104+
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
115105
<li class="toctree-l2"><a class="reference internal" href="pytim.html">pytim</a></li>
106+
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
107+
<li class="toctree-l2"><a class="reference internal" href="MDANCE.html">MDANCE</a></li>
108+
<li class="toctree-l2"><a class="reference internal" href="domhmm.html">domhmm</a></li>
109+
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
110+
<li class="toctree-l2"><a class="reference internal" href="solvation-analysis.html">solvation-analysis</a></li>
111+
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
112+
<li class="toctree-l2"><a class="reference internal" href="ProLIF.html">ProLIF</a></li>
113+
<li class="toctree-l2"><a class="reference internal" href="OpenMMDL.html">OpenMMDL</a></li>
114+
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
115+
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
116116
</ul>
117117
</li>
118118
</ul>
@@ -190,8 +190,8 @@ <h2>Installation instructions<a class="headerlink" href="#installation-instructi
190190
</div>
191191
</div>
192192
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
193-
<a href="openmm-mdanalysis-reporter.html" class="btn btn-neutral float-left" title="openmm-mdanalysis-reporter" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
194-
<a href="pytim.html" class="btn btn-neutral float-right" title="pytim" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
193+
<a href="mdakit-sasa.html" class="btn btn-neutral float-left" title="mdakit-sasa" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
194+
<a href="lipyds.html" class="btn btn-neutral float-right" title="lipyds" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
195195
</div>
196196

197197
<hr/>

OpenMMDL.html

+25-25
Original file line numberDiff line numberDiff line change
@@ -41,8 +41,8 @@
4141
<link rel="author" title="About these documents" href="about.html" />
4242
<link rel="index" title="Index" href="genindex.html" />
4343
<link rel="search" title="Search" href="search.html" />
44-
<link rel="next" title="maicos" href="maicos.html" />
45-
<link rel="prev" title="mdakit-sasa" href="mdakit-sasa.html" />
44+
<link rel="next" title="mdacli" href="mdacli.html" />
45+
<link rel="prev" title="ProLIF" href="ProLIF.html" />
4646
</head>
4747

4848
<body class="wy-body-for-nav">
@@ -85,34 +85,34 @@
8585
<p class="caption" role="heading"><span class="caption-text">MDAKit Registry</span></p>
8686
<ul class="current">
8787
<li class="toctree-l1 current"><a class="reference internal" href="mdakits.html">Registry of MDAnalysis Toolkits (MDAKits)</a><ul class="current">
88+
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
89+
<li class="toctree-l2"><a class="reference internal" href="lipidorderkit.html">lipidorderkit</a></li>
90+
<li class="toctree-l2"><a class="reference internal" href="PathSimAnalysis.html">PathSimAnalysis</a></li>
91+
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
92+
<li class="toctree-l2"><a class="reference internal" href="mda-tui.html">mda-tui</a></li>
8893
<li class="toctree-l2"><a class="reference internal" href="mdaencore.html">mdaencore</a></li>
89-
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
90-
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
91-
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
92-
<li class="toctree-l2 current"><a class="current reference internal" href="#">OpenMMDL</a><ul>
93-
<li class="toctree-l3"><a class="reference internal" href="#installation-instructions">Installation instructions</a></li>
94-
</ul>
95-
</li>
96-
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
97-
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
98-
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
9994
<li class="toctree-l2"><a class="reference internal" href="membrane-curvature.html">membrane-curvature</a></li>
100-
<li class="toctree-l2"><a class="reference internal" href="lipidorderkit.html">lipidorderkit</a></li>
101-
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
95+
<li class="toctree-l2"><a class="reference internal" href="propkatraj.html">propkatraj</a></li>
10296
<li class="toctree-l2"><a class="reference internal" href="transport-analysis.html">transport-analysis</a></li>
97+
<li class="toctree-l2"><a class="reference internal" href="mdakit-sasa.html">mdakit-sasa</a></li>
98+
<li class="toctree-l2"><a class="reference internal" href="MDonatello.html">MDonatello</a></li>
99+
<li class="toctree-l2"><a class="reference internal" href="lipyds.html">lipyds</a></li>
100+
<li class="toctree-l2"><a class="reference internal" href="helanal.html">helanal</a></li>
101+
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
102+
<li class="toctree-l2"><a class="reference internal" href="pytim.html">pytim</a></li>
103+
<li class="toctree-l2"><a class="reference internal" href="maicos.html">maicos</a></li>
103104
<li class="toctree-l2"><a class="reference internal" href="MDANCE.html">MDANCE</a></li>
104-
<li class="toctree-l2"><a class="reference internal" href="mdahole2.html">mdahole2</a></li>
105-
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
106-
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
107105
<li class="toctree-l2"><a class="reference internal" href="domhmm.html">domhmm</a></li>
106+
<li class="toctree-l2"><a class="reference internal" href="zarrtraj.html">zarrtraj</a></li>
108107
<li class="toctree-l2"><a class="reference internal" href="solvation-analysis.html">solvation-analysis</a></li>
108+
<li class="toctree-l2"><a class="reference internal" href="mdachecker.html">mdachecker</a></li>
109109
<li class="toctree-l2"><a class="reference internal" href="ProLIF.html">ProLIF</a></li>
110-
<li class="toctree-l2"><a class="reference internal" href="PathSimAnalysis.html">PathSimAnalysis</a></li>
111-
<li class="toctree-l2"><a class="reference internal" href="waterdynamics.html">waterdynamics</a></li>
112-
<li class="toctree-l2"><a class="reference internal" href="mda-tui.html">mda-tui</a></li>
113-
<li class="toctree-l2"><a class="reference internal" href="openmm-mdanalysis-reporter.html">openmm-mdanalysis-reporter</a></li>
114-
<li class="toctree-l2"><a class="reference internal" href="MDonatello.html">MDonatello</a></li>
115-
<li class="toctree-l2"><a class="reference internal" href="pytim.html">pytim</a></li>
110+
<li class="toctree-l2 current"><a class="current reference internal" href="#">OpenMMDL</a><ul>
111+
<li class="toctree-l3"><a class="reference internal" href="#installation-instructions">Installation instructions</a></li>
112+
</ul>
113+
</li>
114+
<li class="toctree-l2"><a class="reference internal" href="mdacli.html">mdacli</a></li>
115+
<li class="toctree-l2"><a class="reference internal" href="spyrmsdkit.html">spyrmsdkit</a></li>
116116
</ul>
117117
</li>
118118
</ul>
@@ -210,8 +210,8 @@ <h2>Installation instructions<a class="headerlink" href="#installation-instructi
210210
</div>
211211
</div>
212212
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
213-
<a href="mdakit-sasa.html" class="btn btn-neutral float-left" title="mdakit-sasa" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
214-
<a href="maicos.html" class="btn btn-neutral float-right" title="maicos" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
213+
<a href="ProLIF.html" class="btn btn-neutral float-left" title="ProLIF" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
214+
<a href="mdacli.html" class="btn btn-neutral float-right" title="mdacli" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
215215
</div>
216216

217217
<hr/>

0 commit comments

Comments
 (0)