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<a href="base__fixel_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a id="l00001" name="l00001"></a><span class="lineno"> 1</span><span class="comment">/* Copyright (c) 2008-2022 the MRtrix3 contributors.</span></div>
<div class="line"><a id="l00002" name="l00002"></a><span class="lineno"> 2</span><span class="comment"> *</span></div>
<div class="line"><a id="l00003" name="l00003"></a><span class="lineno"> 3</span><span class="comment"> * This Source Code Form is subject to the terms of the Mozilla Public</span></div>
<div class="line"><a id="l00004" name="l00004"></a><span class="lineno"> 4</span><span class="comment"> * License, v. 2.0. If a copy of the MPL was not distributed with this</span></div>
<div class="line"><a id="l00005" name="l00005"></a><span class="lineno"> 5</span><span class="comment"> * file, You can obtain one at http://mozilla.org/MPL/2.0/.</span></div>
<div class="line"><a id="l00006" name="l00006"></a><span class="lineno"> 6</span><span class="comment"> *</span></div>
<div class="line"><a id="l00007" name="l00007"></a><span class="lineno"> 7</span><span class="comment"> * Covered Software is provided under this License on an "as is"</span></div>
<div class="line"><a id="l00008" name="l00008"></a><span class="lineno"> 8</span><span class="comment"> * basis, without warranty of any kind, either expressed, implied, or</span></div>
<div class="line"><a id="l00009" name="l00009"></a><span class="lineno"> 9</span><span class="comment"> * statutory, including, without limitation, warranties that the</span></div>
<div class="line"><a id="l00010" name="l00010"></a><span class="lineno"> 10</span><span class="comment"> * Covered Software is free of defects, merchantable, fit for a</span></div>
<div class="line"><a id="l00011" name="l00011"></a><span class="lineno"> 11</span><span class="comment"> * particular purpose or non-infringing.</span></div>
<div class="line"><a id="l00012" name="l00012"></a><span class="lineno"> 12</span><span class="comment"> * See the Mozilla Public License v. 2.0 for more details.</span></div>
<div class="line"><a id="l00013" name="l00013"></a><span class="lineno"> 13</span><span class="comment"> *</span></div>
<div class="line"><a id="l00014" name="l00014"></a><span class="lineno"> 14</span><span class="comment"> * For more details, see http://www.mrtrix.org/.</span></div>
<div class="line"><a id="l00015" name="l00015"></a><span class="lineno"> 15</span><span class="comment"> */</span></div>
<div class="line"><a id="l00016" name="l00016"></a><span class="lineno"> 16</span> </div>
<div class="line"><a id="l00017" name="l00017"></a><span class="lineno"> 17</span><span class="preprocessor">#ifndef __gui_mrview_tool_fixel_fixelimage_h__</span></div>
<div class="line"><a id="l00018" name="l00018"></a><span class="lineno"> 18</span><span class="preprocessor">#define __gui_mrview_tool_fixel_fixelimage_h__</span></div>
<div class="line"><a id="l00019" name="l00019"></a><span class="lineno"> 19</span> </div>
<div class="line"><a id="l00020" name="l00020"></a><span class="lineno"> 20</span><span class="preprocessor">#include <unordered_map></span></div>
<div class="line"><a id="l00021" name="l00021"></a><span class="lineno"> 21</span> </div>
<div class="line"><a id="l00022" name="l00022"></a><span class="lineno"> 22</span><span class="preprocessor">#include "<a class="code" href="header_8h.html">header.h</a>"</span></div>
<div class="line"><a id="l00023" name="l00023"></a><span class="lineno"> 23</span><span class="preprocessor">#include "<a class="code" href="image_8h.html">image.h</a>"</span></div>
<div class="line"><a id="l00024" name="l00024"></a><span class="lineno"> 24</span><span class="preprocessor">#include "transform.h"</span></div>
<div class="line"><a id="l00025" name="l00025"></a><span class="lineno"> 25</span> </div>
<div class="line"><a id="l00026" name="l00026"></a><span class="lineno"> 26</span><span class="preprocessor">#include "<a class="code" href="algo_2loop_8h.html">algo/loop.h</a>"</span></div>
<div class="line"><a id="l00027" name="l00027"></a><span class="lineno"> 27</span><span class="preprocessor">#include "<a class="code" href="fixel_2legacy_2image_8h.html">fixel/legacy/image.h</a>"</span></div>
<div class="line"><a id="l00028" name="l00028"></a><span class="lineno"> 28</span><span class="preprocessor">#include "<a class="code" href="fixel__metric_8h.html">fixel/legacy/fixel_metric.h</a>"</span></div>
<div class="line"><a id="l00029" name="l00029"></a><span class="lineno"> 29</span><span class="preprocessor">#include "<a class="code" href="core_2fixel_2helpers_8h.html">fixel/helpers.h</a>"</span></div>
<div class="line"><a id="l00030" name="l00030"></a><span class="lineno"> 30</span> </div>
<div class="line"><a id="l00031" name="l00031"></a><span class="lineno"> 31</span><span class="preprocessor">#include "<a class="code" href="displayable_8h.html">gui/mrview/displayable.h</a>"</span></div>
<div class="line"><a id="l00032" name="l00032"></a><span class="lineno"> 32</span><span class="preprocessor">#include "<a class="code" href="gui_2mrview_2tool_2fixel_2fixel_8h.html">gui/mrview/tool/fixel/fixel.h</a>"</span></div>
<div class="line"><a id="l00033" name="l00033"></a><span class="lineno"> 33</span><span class="preprocessor">#include "<a class="code" href="vector__structs_8h.html">gui/mrview/tool/fixel/vector_structs.h</a>"</span></div>
<div class="line"><a id="l00034" name="l00034"></a><span class="lineno"> 34</span> </div>
<div class="line"><a id="l00035" name="l00035"></a><span class="lineno"> 35</span> </div>
<div class="line"><a id="l00036" name="l00036"></a><span class="lineno"> 36</span><span class="keyword">namespace </span><a class="code hl_namespace" href="namespace_m_r.html">MR</a></div>
<div class="line"><a id="l00037" name="l00037"></a><span class="lineno"> 37</span>{</div>
<div class="line"><a id="l00038" name="l00038"></a><span class="lineno"> 38</span> <span class="keyword">namespace </span>GUI</div>
<div class="line"><a id="l00039" name="l00039"></a><span class="lineno"> 39</span> {</div>
<div class="line"><a id="l00040" name="l00040"></a><span class="lineno"> 40</span> <span class="keyword">namespace </span>MRView</div>
<div class="line"><a id="l00041" name="l00041"></a><span class="lineno"> 41</span> {</div>
<div class="line"><a id="l00042" name="l00042"></a><span class="lineno"> 42</span> <span class="keyword">namespace </span>Tool</div>
<div class="line"><a id="l00043" name="l00043"></a><span class="lineno"> 43</span> {</div>
<div class="line"><a id="l00044" name="l00044"></a><span class="lineno"> 44</span> </div>
<div class="line"><a id="l00045" name="l00045"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html"> 45</a></span> <span class="keyword">class </span><a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">BaseFixel</a> : <span class="keyword">public</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a> { <a class="code hl_define" href="src_2surface_2types_8h.html#a11d7eae3ab5178ebcf0e62cae9c26cd4">MEMALIGN</a> (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">BaseFixel</a>)</div>
<div class="line"><a id="l00046" name="l00046"></a><span class="lineno"> 46</span> <span class="keyword">public</span>:</div>
<div class="line"><a id="l00047" name="l00047"></a><span class="lineno"> 47</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">BaseFixel</a> (<span class="keyword">const</span> std::string&, <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel.html">Fixel</a>&);</div>
<div class="line"><a id="l00048" name="l00048"></a><span class="lineno"> 48</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">~BaseFixel</a>();</div>
<div class="line"><a id="l00049" name="l00049"></a><span class="lineno"> 49</span> </div>
<div class="line"><a id="l00050" name="l00050"></a><span class="lineno"> 50</span> <span class="keyword">class </span>Shader : <span class="keyword">public</span> Displayable::Shader { <a class="code hl_define" href="src_2surface_2types_8h.html#a11d7eae3ab5178ebcf0e62cae9c26cd4">MEMALIGN</a> (Shader)</div>
<div class="line"><a id="l00051" name="l00051"></a><span class="lineno"> 51</span> <span class="keyword">public</span>:</div>
<div class="line"><a id="l00052" name="l00052"></a><span class="lineno"> 52</span> Shader () : do_crop_to_slice (<span class="keyword">false</span>), bidirectional (<span class="keyword">false</span>), color_type (<a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a6abba1d41ef6f443ed72694191fd83ad">Direction</a>), <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09">scale_type</a> (<a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976aaa6bb5826104284c0529c5b7ad1ae0fc">Value</a>) { }</div>
<div class="line"><a id="l00053" name="l00053"></a><span class="lineno"> 53</span> std::string vertex_shader_source (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a>&) <span class="keyword">override</span>;</div>
<div class="line"><a id="l00054" name="l00054"></a><span class="lineno"> 54</span> std::string geometry_shader_source (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a>&) <span class="keyword">override</span>;</div>
<div class="line"><a id="l00055" name="l00055"></a><span class="lineno"> 55</span> std::string fragment_shader_source (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a>&) <span class="keyword">override</span>;</div>
<div class="line"><a id="l00056" name="l00056"></a><span class="lineno"> 56</span> <span class="keyword">virtual</span> <span class="keywordtype">bool</span> need_update (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a>&) <span class="keyword">const override</span>;</div>
<div class="line"><a id="l00057" name="l00057"></a><span class="lineno"> 57</span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> update (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">Displayable</a>&) <span class="keyword">override</span>;</div>
<div class="line"><a id="l00058" name="l00058"></a><span class="lineno"> 58</span> <span class="keyword">protected</span>:</div>
<div class="line"><a id="l00059" name="l00059"></a><span class="lineno"> 59</span> <span class="keywordtype">bool</span> do_crop_to_slice, bidirectional;</div>
<div class="line"><a id="l00060" name="l00060"></a><span class="lineno"> 60</span> <a class="code hl_enumeration" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80">FixelColourType</a> color_type;</div>
<div class="line"><a id="l00061" name="l00061"></a><span class="lineno"> 61</span> <a class="code hl_enumeration" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976">FixelScaleType</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09">scale_type</a>;</div>
<div class="line"><a id="l00062" name="l00062"></a><span class="lineno"> 62</span> } fixel_shader;</div>
<div class="line"><a id="l00063" name="l00063"></a><span class="lineno"> 63</span> </div>
<div class="line"><a id="l00064" name="l00064"></a><span class="lineno"> 64</span> </div>
<div class="line"><a id="l00065" name="l00065"></a><span class="lineno"> 65</span> <span class="keywordtype">void</span> render (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_projection.html">Projection</a>& projection);</div>
<div class="line"><a id="l00066" name="l00066"></a><span class="lineno"> 66</span> </div>
<div class="line"><a id="l00067" name="l00067"></a><span class="lineno"> 67</span> <span class="keywordtype">void</span> request_render_colourbar (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor.html">DisplayableVisitor</a>& visitor)<span class="keyword"> override </span>{</div>
<div class="line"><a id="l00068" name="l00068"></a><span class="lineno"> 68</span> <span class="keywordflow">if</span>(<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> == <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a> && show_colour_bar)</div>
<div class="line"><a id="l00069" name="l00069"></a><span class="lineno"> 69</span> visitor.<a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor.html#a5fb6bfe653fd50741bc6d82d61e10b89">render_fixel_colourbar</a>(*<span class="keyword">this</span>);</div>
<div class="line"><a id="l00070" name="l00070"></a><span class="lineno"> 70</span> }</div>
<div class="line"><a id="l00071" name="l00071"></a><span class="lineno"> 71</span> </div>
<div class="line"><a id="l00072" name="l00072"></a><span class="lineno"> 72</span> <span class="keywordtype">void</span> load_image (<span class="keyword">const</span> std::string &<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#ac975fb9af65b13ad36d12f8b900217da">filename</a>);</div>
<div class="line"><a id="l00073" name="l00073"></a><span class="lineno"> 73</span> </div>
<div class="line"><a id="l00074" name="l00074"></a><span class="lineno"> 74</span> <span class="keywordtype">void</span> reload_directions_buffer ();</div>
<div class="line"><a id="l00075" name="l00075"></a><span class="lineno"> 75</span> </div>
<div class="line"><a id="l00076" name="l00076"></a><span class="lineno"> 76</span> <span class="keywordtype">void</span> reload_colours_buffer ();</div>
<div class="line"><a id="l00077" name="l00077"></a><span class="lineno"> 77</span> </div>
<div class="line"><a id="l00078" name="l00078"></a><span class="lineno"> 78</span> <span class="keywordtype">void</span> reload_values_buffer ();</div>
<div class="line"><a id="l00079" name="l00079"></a><span class="lineno"> 79</span> </div>
<div class="line"><a id="l00080" name="l00080"></a><span class="lineno"> 80</span> <span class="keywordtype">void</span> reload_threshold_buffer ();</div>
<div class="line"><a id="l00081" name="l00081"></a><span class="lineno"> 81</span> </div>
<div class="line"><a id="l00082" name="l00082"></a><span class="lineno"> 82</span> <span class="keywordtype">void</span> set_line_length_multiplier (<span class="keywordtype">float</span> <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>) {</div>
<div class="line"><a id="l00083" name="l00083"></a><span class="lineno"> 83</span> user_line_length_multiplier = <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>;</div>
<div class="line"><a id="l00084" name="l00084"></a><span class="lineno"> 84</span> }</div>
<div class="line"><a id="l00085" name="l00085"></a><span class="lineno"> 85</span> </div>
<div class="line"><a id="l00086" name="l00086"></a><span class="lineno"> 86</span> <span class="keywordtype">float</span> get_line_length_multiplier ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00087" name="l00087"></a><span class="lineno"> 87</span> <span class="keywordflow">return</span> user_line_length_multiplier;</div>
<div class="line"><a id="l00088" name="l00088"></a><span class="lineno"> 88</span> }</div>
<div class="line"><a id="l00089" name="l00089"></a><span class="lineno"> 89</span> </div>
<div class="line"><a id="l00090" name="l00090"></a><span class="lineno"> 90</span> <span class="keywordtype">void</span> set_line_thickness (<span class="keywordtype">float</span> <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>) {</div>
<div class="line"><a id="l00091" name="l00091"></a><span class="lineno"> 91</span> line_thickness = <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>;</div>
<div class="line"><a id="l00092" name="l00092"></a><span class="lineno"> 92</span> }</div>
<div class="line"><a id="l00093" name="l00093"></a><span class="lineno"> 93</span> </div>
<div class="line"><a id="l00094" name="l00094"></a><span class="lineno"> 94</span> <span class="keywordtype">float</span> get_line_thickenss ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00095" name="l00095"></a><span class="lineno"> 95</span> <span class="keywordflow">return</span> line_thickness;</div>
<div class="line"><a id="l00096" name="l00096"></a><span class="lineno"> 96</span> }</div>
<div class="line"><a id="l00097" name="l00097"></a><span class="lineno"> 97</span> </div>
<div class="line"><a id="l00098" name="l00098"></a><span class="lineno"> 98</span> <span class="keywordtype">size_t</span> get_scale_type_index ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00099" name="l00099"></a><span class="lineno"> 99</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a>;</div>
<div class="line"><a id="l00100" name="l00100"></a><span class="lineno"> 100</span> }</div>
<div class="line"><a id="l00101" name="l00101"></a><span class="lineno"> 101</span> </div>
<div class="line"><a id="l00102" name="l00102"></a><span class="lineno"> 102</span> <span class="keywordtype">void</span> set_scale_type_index (<span class="keywordtype">size_t</span> <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>)</div>
<div class="line"><a id="l00103" name="l00103"></a><span class="lineno"> 103</span> {</div>
<div class="line"><a id="l00104" name="l00104"></a><span class="lineno"> 104</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a> != <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a>) {</div>
<div class="line"><a id="l00105" name="l00105"></a><span class="lineno"> 105</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a> = <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>;</div>
<div class="line"><a id="l00106" name="l00106"></a><span class="lineno"> 106</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09">scale_type</a> = <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a> == 0 ? <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976ad6bc906f68322d238ae91e4bad6b5fda">Unity</a> : <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976aaa6bb5826104284c0529c5b7ad1ae0fc">Value</a>;</div>
<div class="line"><a id="l00107" name="l00107"></a><span class="lineno"> 107</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3dbfe0d150cecf52181cba6c0c3ed027">value_buffer_dirty</a> = <span class="keyword">true</span>;</div>
<div class="line"><a id="l00108" name="l00108"></a><span class="lineno"> 108</span> }</div>
<div class="line"><a id="l00109" name="l00109"></a><span class="lineno"> 109</span> }</div>
<div class="line"><a id="l00110" name="l00110"></a><span class="lineno"> 110</span> </div>
<div class="line"><a id="l00111" name="l00111"></a><span class="lineno"> 111</span> <span class="keywordtype">size_t</span> get_threshold_type_index ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00112" name="l00112"></a><span class="lineno"> 112</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a>;</div>
<div class="line"><a id="l00113" name="l00113"></a><span class="lineno"> 113</span> }</div>
<div class="line"><a id="l00114" name="l00114"></a><span class="lineno"> 114</span> </div>
<div class="line"><a id="l00115" name="l00115"></a><span class="lineno"> 115</span> <span class="keywordtype">void</span> set_threshold_type_index (<span class="keywordtype">size_t</span> <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>)</div>
<div class="line"><a id="l00116" name="l00116"></a><span class="lineno"> 116</span> {</div>
<div class="line"><a id="l00117" name="l00117"></a><span class="lineno"> 117</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a> != <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a>) {</div>
<div class="line"><a id="l00118" name="l00118"></a><span class="lineno"> 118</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a> = <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>;</div>
<div class="line"><a id="l00119" name="l00119"></a><span class="lineno"> 119</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> == <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a>) {</div>
<div class="line"><a id="l00120" name="l00120"></a><span class="lineno"> 120</span> lessthan = get_threshold_lower ();</div>
<div class="line"><a id="l00121" name="l00121"></a><span class="lineno"> 121</span> greaterthan = get_threshold_upper ();</div>
<div class="line"><a id="l00122" name="l00122"></a><span class="lineno"> 122</span> }</div>
<div class="line"><a id="l00123" name="l00123"></a><span class="lineno"> 123</span> </div>
<div class="line"><a id="l00124" name="l00124"></a><span class="lineno"> 124</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac130490abce5b30355f4590c55238cc9">threshold_buffer_dirty</a> = <span class="keyword">true</span>;</div>
<div class="line"><a id="l00125" name="l00125"></a><span class="lineno"> 125</span> }</div>
<div class="line"><a id="l00126" name="l00126"></a><span class="lineno"> 126</span> }</div>
<div class="line"><a id="l00127" name="l00127"></a><span class="lineno"> 127</span> </div>
<div class="line"><a id="l00128" name="l00128"></a><span class="lineno"> 128</span> <span class="keywordtype">size_t</span> get_colour_type_index ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00129" name="l00129"></a><span class="lineno"> 129</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a>;</div>
<div class="line"><a id="l00130" name="l00130"></a><span class="lineno"> 130</span> }</div>
<div class="line"><a id="l00131" name="l00131"></a><span class="lineno"> 131</span> </div>
<div class="line"><a id="l00132" name="l00132"></a><span class="lineno"> 132</span> <span class="keywordtype">void</span> set_colour_type_index (<span class="keywordtype">size_t</span> <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>) {</div>
<div class="line"><a id="l00133" name="l00133"></a><span class="lineno"> 133</span> <span class="keyword">auto</span>& fixel_val = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">current_fixel_colour_state</a> ();</div>
<div class="line"><a id="l00134" name="l00134"></a><span class="lineno"> 134</span> fixel_val.current_min = std::isfinite (scaling_min ()) ? scaling_min () : fixel_val.current_min;</div>
<div class="line"><a id="l00135" name="l00135"></a><span class="lineno"> 135</span> fixel_val.current_max = std::isfinite (scaling_max ()) ? scaling_max () : fixel_val.current_max;</div>
<div class="line"><a id="l00136" name="l00136"></a><span class="lineno"> 136</span> </div>
<div class="line"><a id="l00137" name="l00137"></a><span class="lineno"> 137</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a> != <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a>) {</div>
<div class="line"><a id="l00138" name="l00138"></a><span class="lineno"> 138</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a> = <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a>;</div>
<div class="line"><a id="l00139" name="l00139"></a><span class="lineno"> 139</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> = <a class="code hl_variable" href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a> == 0 ? <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a6abba1d41ef6f443ed72694191fd83ad">Direction</a> : <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a>;</div>
<div class="line"><a id="l00140" name="l00140"></a><span class="lineno"> 140</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9c833b9a7fd2cb2f7dd4c764ead7f40d">colour_buffer_dirty</a> = <span class="keyword">true</span>;</div>
<div class="line"><a id="l00141" name="l00141"></a><span class="lineno"> 141</span> }</div>
<div class="line"><a id="l00142" name="l00142"></a><span class="lineno"> 142</span> </div>
<div class="line"><a id="l00143" name="l00143"></a><span class="lineno"> 143</span> <span class="keyword">auto</span>& new_fixel_val = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">current_fixel_colour_state</a> ();</div>
<div class="line"><a id="l00144" name="l00144"></a><span class="lineno"> 144</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#afc49cfff61f8c3109f61b9ad48727e55">value_min</a> = new_fixel_val.value_min;</div>
<div class="line"><a id="l00145" name="l00145"></a><span class="lineno"> 145</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#a29eaf9c18bad2115a062606f9fbbe202">value_max</a> = new_fixel_val.value_max;</div>
<div class="line"><a id="l00146" name="l00146"></a><span class="lineno"> 146</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> == <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a>) {</div>
<div class="line"><a id="l00147" name="l00147"></a><span class="lineno"> 147</span> lessthan = get_threshold_lower ();</div>
<div class="line"><a id="l00148" name="l00148"></a><span class="lineno"> 148</span> greaterthan = get_threshold_upper ();</div>
<div class="line"><a id="l00149" name="l00149"></a><span class="lineno"> 149</span> }</div>
<div class="line"><a id="l00150" name="l00150"></a><span class="lineno"> 150</span> set_windowing (new_fixel_val.current_min, new_fixel_val.current_max);</div>
<div class="line"><a id="l00151" name="l00151"></a><span class="lineno"> 151</span> }</div>
<div class="line"><a id="l00152" name="l00152"></a><span class="lineno"> 152</span> </div>
<div class="line"><a id="l00153" name="l00153"></a><span class="lineno"> 153</span> <a class="code hl_enumeration" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80">FixelColourType</a> get_colour_type ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00154" name="l00154"></a><span class="lineno"> 154</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a>;</div>
<div class="line"><a id="l00155" name="l00155"></a><span class="lineno"> 155</span> }</div>
<div class="line"><a id="l00156" name="l00156"></a><span class="lineno"> 156</span> </div>
<div class="line"><a id="l00157" name="l00157"></a><span class="lineno"> 157</span> <span class="keywordtype">float</span> get_threshold_lower ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00158" name="l00158"></a><span class="lineno"> 158</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_thresh = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ();</div>
<div class="line"><a id="l00159" name="l00159"></a><span class="lineno"> 159</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_val = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">current_fixel_colour_state</a> ();</div>
<div class="line"><a id="l00160" name="l00160"></a><span class="lineno"> 160</span> <span class="keywordflow">return</span> fixel_thresh.<a class="code hl_function" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a177a786f6f06fbccdb03d6860f0e3370">get_relative_threshold_lower</a> (fixel_val);</div>
<div class="line"><a id="l00161" name="l00161"></a><span class="lineno"> 161</span> }</div>
<div class="line"><a id="l00162" name="l00162"></a><span class="lineno"> 162</span> </div>
<div class="line"><a id="l00163" name="l00163"></a><span class="lineno"> 163</span> <span class="keywordtype">float</span> get_unscaled_threshold_lower ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00164" name="l00164"></a><span class="lineno"> 164</span> <span class="keywordflow">return</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ().<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a17c0671fca29b2c16f8ab17622a0005d">lessthan</a>;</div>
<div class="line"><a id="l00165" name="l00165"></a><span class="lineno"> 165</span> }</div>
<div class="line"><a id="l00166" name="l00166"></a><span class="lineno"> 166</span> </div>
<div class="line"><a id="l00167" name="l00167"></a><span class="lineno"> 167</span> <span class="keywordtype">void</span> set_threshold_lower (<span class="keywordtype">float</span> <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>) {</div>
<div class="line"><a id="l00168" name="l00168"></a><span class="lineno"> 168</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_threshold = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ();</div>
<div class="line"><a id="l00169" name="l00169"></a><span class="lineno"> 169</span> fixel_threshold.<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a17c0671fca29b2c16f8ab17622a0005d">lessthan</a> = <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>;</div>
<div class="line"><a id="l00170" name="l00170"></a><span class="lineno"> 170</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> == <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a>)</div>
<div class="line"><a id="l00171" name="l00171"></a><span class="lineno"> 171</span> lessthan = get_threshold_lower ();</div>
<div class="line"><a id="l00172" name="l00172"></a><span class="lineno"> 172</span> }</div>
<div class="line"><a id="l00173" name="l00173"></a><span class="lineno"> 173</span> </div>
<div class="line"><a id="l00174" name="l00174"></a><span class="lineno"> 174</span> <span class="keywordtype">float</span> get_threshold_upper ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00175" name="l00175"></a><span class="lineno"> 175</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_thresh = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ();</div>
<div class="line"><a id="l00176" name="l00176"></a><span class="lineno"> 176</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_val = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">current_fixel_colour_state</a> ();</div>
<div class="line"><a id="l00177" name="l00177"></a><span class="lineno"> 177</span> <span class="keywordflow">return</span> fixel_thresh.<a class="code hl_function" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a7f9fedb3d3e09e5311e3a516d411e66a">get_relative_threshold_upper</a> (fixel_val);</div>
<div class="line"><a id="l00178" name="l00178"></a><span class="lineno"> 178</span> }</div>
<div class="line"><a id="l00179" name="l00179"></a><span class="lineno"> 179</span> </div>
<div class="line"><a id="l00180" name="l00180"></a><span class="lineno"> 180</span> <span class="keywordtype">float</span> get_unscaled_threshold_upper ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00181" name="l00181"></a><span class="lineno"> 181</span> <span class="keywordflow">return</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ().<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a8ea745b77c40b57395ac9d4bb2af773c">greaterthan</a>;</div>
<div class="line"><a id="l00182" name="l00182"></a><span class="lineno"> 182</span> }</div>
<div class="line"><a id="l00183" name="l00183"></a><span class="lineno"> 183</span> </div>
<div class="line"><a id="l00184" name="l00184"></a><span class="lineno"> 184</span> <span class="keywordtype">void</span> set_threshold_upper (<span class="keywordtype">float</span> <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>) {</div>
<div class="line"><a id="l00185" name="l00185"></a><span class="lineno"> 185</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_threshold = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ();</div>
<div class="line"><a id="l00186" name="l00186"></a><span class="lineno"> 186</span> fixel_threshold.<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a8ea745b77c40b57395ac9d4bb2af773c">greaterthan</a> = <a class="code hl_function" href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">value</a>;</div>
<div class="line"><a id="l00187" name="l00187"></a><span class="lineno"> 187</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a> == <a class="code hl_enumvalue" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">CValue</a>)</div>
<div class="line"><a id="l00188" name="l00188"></a><span class="lineno"> 188</span> greaterthan = get_threshold_upper ();</div>
<div class="line"><a id="l00189" name="l00189"></a><span class="lineno"> 189</span> }</div>
<div class="line"><a id="l00190" name="l00190"></a><span class="lineno"> 190</span> </div>
<div class="line"><a id="l00191" name="l00191"></a><span class="lineno"> 191</span> <span class="keywordtype">float</span> get_unscaled_threshold_rate ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00192" name="l00192"></a><span class="lineno"> 192</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& fixel_threshold = <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ();</div>
<div class="line"><a id="l00193" name="l00193"></a><span class="lineno"> 193</span> <span class="keywordflow">return</span> 1<a class="code hl_variable" href="group__mathconstants.html#ga4bded66901b06bc4f71952e3cd3185ea">e</a>-3 * (fixel_threshold.<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a4f961e063a252f686c3436142b6b3c00">value_max</a> - fixel_threshold.<a class="code hl_variable" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#adeea3332612a9eb004ecd34fe829a879">value_min</a>);</div>
<div class="line"><a id="l00194" name="l00194"></a><span class="lineno"> 194</span> }</div>
<div class="line"><a id="l00195" name="l00195"></a><span class="lineno"> 195</span> </div>
<div class="line"><a id="l00196" name="l00196"></a><span class="lineno"> 196</span> <span class="keywordtype">void</span> load_colourby_combobox_options (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_combo_box_with_error_msg.html">ComboBoxWithErrorMsg</a>& combo_box)<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00197" name="l00197"></a><span class="lineno"> 197</span> combo_box.clear ();</div>
<div class="line"><a id="l00198" name="l00198"></a><span class="lineno"> 198</span> <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> i = 0, N = <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed">colour_types</a>.size (); i < N; ++i)</div>
<div class="line"><a id="l00199" name="l00199"></a><span class="lineno"> 199</span> combo_box.addItem (<a class="code hl_function" href="namespace_m_r_1_1_g_u_i.html#a9b1b77877b492d7a1638364a3a94fc1b">qstr</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed">colour_types</a>[i]));</div>
<div class="line"><a id="l00200" name="l00200"></a><span class="lineno"> 200</span> combo_box.setCurrentIndex (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a>);</div>
<div class="line"><a id="l00201" name="l00201"></a><span class="lineno"> 201</span> }</div>
<div class="line"><a id="l00202" name="l00202"></a><span class="lineno"> 202</span> </div>
<div class="line"><a id="l00203" name="l00203"></a><span class="lineno"> 203</span> <span class="keywordtype">void</span> load_scaleby_combobox_options (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_combo_box_with_error_msg.html">ComboBoxWithErrorMsg</a>& combo_box)<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00204" name="l00204"></a><span class="lineno"> 204</span> combo_box.clear ();</div>
<div class="line"><a id="l00205" name="l00205"></a><span class="lineno"> 205</span> <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span>& value_name: <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">value_types</a>)</div>
<div class="line"><a id="l00206" name="l00206"></a><span class="lineno"> 206</span> combo_box.addItem (<a class="code hl_function" href="namespace_m_r_1_1_g_u_i.html#a9b1b77877b492d7a1638364a3a94fc1b">qstr</a> (value_name));</div>
<div class="line"><a id="l00207" name="l00207"></a><span class="lineno"> 207</span> combo_box.setCurrentIndex (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a>);</div>
<div class="line"><a id="l00208" name="l00208"></a><span class="lineno"> 208</span> }</div>
<div class="line"><a id="l00209" name="l00209"></a><span class="lineno"> 209</span> </div>
<div class="line"><a id="l00210" name="l00210"></a><span class="lineno"> 210</span> <span class="keywordtype">void</span> load_threshold_combobox_options (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_combo_box_with_error_msg.html">ComboBoxWithErrorMsg</a>& combo_box)<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00211" name="l00211"></a><span class="lineno"> 211</span> combo_box.clear ();</div>
<div class="line"><a id="l00212" name="l00212"></a><span class="lineno"> 212</span> <span class="keywordflow">for</span> (<span class="keywordtype">size_t</span> i = 1, N = <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">value_types</a>.size (); i < N; ++i)</div>
<div class="line"><a id="l00213" name="l00213"></a><span class="lineno"> 213</span> combo_box.addItem (<a class="code hl_function" href="namespace_m_r_1_1_g_u_i.html#a9b1b77877b492d7a1638364a3a94fc1b">qstr</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">value_types</a>[i]));</div>
<div class="line"><a id="l00214" name="l00214"></a><span class="lineno"> 214</span> combo_box.setCurrentIndex (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a>);</div>
<div class="line"><a id="l00215" name="l00215"></a><span class="lineno"> 215</span> }</div>
<div class="line"><a id="l00216" name="l00216"></a><span class="lineno"> 216</span> </div>
<div class="line"><a id="l00217" name="l00217"></a><span class="lineno"> 217</span> <span class="keywordtype">bool</span> has_values ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00218" name="l00218"></a><span class="lineno"> 218</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abca3a72653dcc202d1eca3c538527c2e">fixel_values</a>.size();</div>
<div class="line"><a id="l00219" name="l00219"></a><span class="lineno"> 219</span> }</div>
<div class="line"><a id="l00220" name="l00220"></a><span class="lineno"> 220</span> </div>
<div class="line"><a id="l00221" name="l00221"></a><span class="lineno"> 221</span> <span class="keyword">protected</span>:</div>
<div class="line"><a id="l00222" name="l00222"></a><span class="lineno"><a class="line" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html"> 222</a></span> <span class="keyword">struct </span><a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html">IntPointHasher</a> { <a class="code hl_define" href="memory_8h.html#a5d1aa93e600a93cee8523d1d34c1ace5">NOMEMALIGN</a></div>
<div class="line"><a id="l00223" name="l00223"></a><span class="lineno"><a class="line" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html#a9588a6912c0336d3c94a1e5ba703dddb"> 223</a></span> <span class="keywordtype">size_t</span> <a class="code hl_function" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html#a9588a6912c0336d3c94a1e5ba703dddb">operator () </a>(<span class="keyword">const</span> std::array<int, 3>& v)<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00224" name="l00224"></a><span class="lineno"> 224</span> <span class="comment">// This hashing function works best if the fixel image dimensions</span></div>
<div class="line"><a id="l00225" name="l00225"></a><span class="lineno"> 225</span> <span class="comment">// are bounded above by 2^10 x 2^10 x 2^10 = 1024 x 1024 x 1024</span></div>
<div class="line"><a id="l00226" name="l00226"></a><span class="lineno"> 226</span> <span class="keywordflow">return</span> (v[0] + (v[1] << 10) + (v[2] << 20));</div>
<div class="line"><a id="l00227" name="l00227"></a><span class="lineno"> 227</span> }</div>
<div class="line"><a id="l00228" name="l00228"></a><span class="lineno"> 228</span> };</div>
<div class="line"><a id="l00229" name="l00229"></a><span class="lineno"> 229</span> </div>
<div class="line"><a id="l00230" name="l00230"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7bd55044104537af11dbaf88e98abfb6"> 230</a></span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7bd55044104537af11dbaf88e98abfb6">update_image_buffers</a> ();</div>
<div class="line"><a id="l00231" name="l00231"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0553bc13a39ff2e0c10133034b868fbc"> 231</a></span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0553bc13a39ff2e0c10133034b868fbc">load_image_buffer</a>() = 0;</div>
<div class="line"><a id="l00232" name="l00232"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0953e6e4593e4b8668665a4c7da9dbac"> 232</a></span> <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0953e6e4593e4b8668665a4c7da9dbac">request_update_interp_image_buffer</a> (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_projection.html">Projection</a>&) = 0;</div>
<div class="line"><a id="l00233" name="l00233"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7b579dc859d3fd7cd795867109b5ee9a"> 233</a></span> <span class="keywordtype">void</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7b579dc859d3fd7cd795867109b5ee9a">update_interp_image_buffer</a> (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_projection.html">Projection</a>&, <span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_header.html">MR::Header</a>&, <span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_transform.html">MR::Transform</a>&);</div>
<div class="line"><a id="l00234" name="l00234"></a><span class="lineno"> 234</span> </div>
<div class="line"><a id="l00235" name="l00235"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4a2e8b8e0a3530d5cb0b8de4cd16cd09"> 235</a></span> <span class="keyword">inline</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4a2e8b8e0a3530d5cb0b8de4cd16cd09">current_fixel_value_state</a> ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00236" name="l00236"></a><span class="lineno"> 236</span> <span class="keywordflow">return</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a">get_fixel_value</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">value_types</a>[<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a>]);</div>
<div class="line"><a id="l00237" name="l00237"></a><span class="lineno"> 237</span> }</div>
<div class="line"><a id="l00238" name="l00238"></a><span class="lineno"> 238</span> </div>
<div class="line"><a id="l00239" name="l00239"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594"> 239</a></span> <span class="keyword">inline</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">current_fixel_threshold_state</a> ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00240" name="l00240"></a><span class="lineno"> 240</span> <span class="keywordflow">return</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a">get_fixel_value</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7ac4dbdd6b2ff54ac7c5479c3b881d1b">threshold_types</a>[<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a>]);</div>
<div class="line"><a id="l00241" name="l00241"></a><span class="lineno"> 241</span> }</div>
<div class="line"><a id="l00242" name="l00242"></a><span class="lineno"> 242</span> </div>
<div class="line"><a id="l00243" name="l00243"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3"> 243</a></span> <span class="keyword">inline</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">current_fixel_colour_state</a> ()<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00244" name="l00244"></a><span class="lineno"> 244</span> <span class="keywordflow">return</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a">get_fixel_value</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed">colour_types</a>[<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a>]);</div>
<div class="line"><a id="l00245" name="l00245"></a><span class="lineno"> 245</span> }</div>
<div class="line"><a id="l00246" name="l00246"></a><span class="lineno"> 246</span> </div>
<div class="line"><a id="l00247" name="l00247"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a"> 247</a></span> <span class="keyword">virtual</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a>& <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a">get_fixel_value</a> (<span class="keyword">const</span> std::string& key)<span class="keyword"> const </span>{</div>
<div class="line"><a id="l00248" name="l00248"></a><span class="lineno"> 248</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abca3a72653dcc202d1eca3c538527c2e">fixel_values</a>[key];</div>
<div class="line"><a id="l00249" name="l00249"></a><span class="lineno"> 249</span> }</div>
<div class="line"><a id="l00250" name="l00250"></a><span class="lineno"> 250</span> </div>
<div class="line"><a id="l00251" name="l00251"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3829db6580926036c4b89eed3e2e2583"> 251</a></span> <a class="code hl_class" href="class_m_r_1_1_header.html">MR::Header</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3829db6580926036c4b89eed3e2e2583">header</a>;</div>
<div class="line"><a id="l00252" name="l00252"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed"> 252</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<std::string></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed">colour_types</a>;</div>
<div class="line"><a id="l00253" name="l00253"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54"> 253</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<std::string></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">value_types</a>;</div>
<div class="line"><a id="l00254" name="l00254"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7ac4dbdd6b2ff54ac7c5479c3b881d1b"> 254</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<std::string></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7ac4dbdd6b2ff54ac7c5479c3b881d1b">threshold_types</a>;</div>
<div class="line"><a id="l00255" name="l00255"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abca3a72653dcc202d1eca3c538527c2e"> 255</a></span> <span class="keyword">mutable</span> std::map<const std::string, FixelValue> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abca3a72653dcc202d1eca3c538527c2e">fixel_values</a>;</div>
<div class="line"><a id="l00256" name="l00256"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abc5422a46ea60b121ab58b04ccb6a083"> 256</a></span> <span class="keyword">mutable</span> <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">FixelValue</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abc5422a46ea60b121ab58b04ccb6a083">dummy_fixel_val_state</a>;</div>
<div class="line"><a id="l00257" name="l00257"></a><span class="lineno"> 257</span> </div>
<div class="line"><a id="l00258" name="l00258"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#adc89de452fb3feb9453cf6e3dd341def"> 258</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<Eigen::Vector3f></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#adc89de452fb3feb9453cf6e3dd341def">pos_buffer_store</a>;</div>
<div class="line"><a id="l00259" name="l00259"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac07b2927510b0b406e0701309f647b5e"> 259</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<Eigen::Vector3f></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac07b2927510b0b406e0701309f647b5e">dir_buffer_store</a>;</div>
<div class="line"><a id="l00260" name="l00260"></a><span class="lineno"> 260</span> </div>
<div class="line"><a id="l00261" name="l00261"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9f2803fa11eddfa2c1d7e5ddcccccecb"> 261</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<Eigen::Vector3f></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9f2803fa11eddfa2c1d7e5ddcccccecb">regular_grid_buffer_pos</a>;</div>
<div class="line"><a id="l00262" name="l00262"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a71d5b094e6f52a1ecae33bfc488c89d6"> 262</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<Eigen::Vector3f></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a71d5b094e6f52a1ecae33bfc488c89d6">regular_grid_buffer_dir</a>;</div>
<div class="line"><a id="l00263" name="l00263"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab4ce9b714e736d08bad137d0cb8cd16f"> 263</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<float></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab4ce9b714e736d08bad137d0cb8cd16f">regular_grid_buffer_colour</a>;</div>
<div class="line"><a id="l00264" name="l00264"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#af45d0a855db2f8f243a7b68758615c44"> 264</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<float></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#af45d0a855db2f8f243a7b68758615c44">regular_grid_buffer_val</a>;</div>
<div class="line"><a id="l00265" name="l00265"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a51804d917f1e8a30d8ec845200673608"> 265</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<float></a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a51804d917f1e8a30d8ec845200673608">regular_grid_buffer_threshold</a>;</div>
<div class="line"><a id="l00266" name="l00266"></a><span class="lineno"> 266</span> </div>
<div class="line"><a id="l00267" name="l00267"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aaad323203cb549af172439136d8fe659"> 267</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<vector<vector<GLint></a> > > <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aaad323203cb549af172439136d8fe659">slice_fixel_indices</a>;</div>
<div class="line"><a id="l00268" name="l00268"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab891da5fa3d89410980d14feecea1ccb"> 268</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<vector<vector<GLsizei></a> > > <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab891da5fa3d89410980d14feecea1ccb">slice_fixel_sizes</a>;</div>
<div class="line"><a id="l00269" name="l00269"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa5f8419248de62d2d71a35e60b1a6e40"> 269</a></span> <a class="code hl_class" href="class_m_r_1_1vector.html">vector<vector<GLsizei></a> > <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa5f8419248de62d2d71a35e60b1a6e40">slice_fixel_counts</a>;</div>
<div class="line"><a id="l00270" name="l00270"></a><span class="lineno"> 270</span> </div>
<div class="line"><a id="l00271" name="l00271"></a><span class="lineno"> 271</span> <span class="comment">// Flattened buffer used when cropping to slice</span></div>
<div class="line"><a id="l00272" name="l00272"></a><span class="lineno"> 272</span> <span class="comment">// To support off-axis rendering, we maintain dict mapping voxels to buffer_pos indices</span></div>
<div class="line"><a id="l00273" name="l00273"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a847149eaa2f099999667a4c0236bf991"> 273</a></span> std::unordered_map <std::array<int, 3>, <a class="code hl_class" href="class_m_r_1_1vector.html">vector<GLint></a>, <a class="code hl_struct" href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html">IntPointHasher</a>> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a847149eaa2f099999667a4c0236bf991">voxel_to_indices_map</a>;</div>
<div class="line"><a id="l00274" name="l00274"></a><span class="lineno"> 274</span> </div>
<div class="line"><a id="l00275" name="l00275"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1"> 275</a></span> <a class="code hl_enumeration" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80">FixelColourType</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">colour_type</a>;</div>
<div class="line"><a id="l00276" name="l00276"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09"> 276</a></span> <a class="code hl_enumeration" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976">FixelScaleType</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09">scale_type</a>;</div>
<div class="line"><a id="l00277" name="l00277"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359"> 277</a></span> <span class="keywordtype">size_t</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">colour_type_index</a>;</div>
<div class="line"><a id="l00278" name="l00278"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6"> 278</a></span> <span class="keywordtype">size_t</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">scale_type_index</a>;</div>
<div class="line"><a id="l00279" name="l00279"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3"> 279</a></span> <span class="keywordtype">size_t</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">threshold_type_index</a>;</div>
<div class="line"><a id="l00280" name="l00280"></a><span class="lineno"> 280</span> </div>
<div class="line"><a id="l00281" name="l00281"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9c833b9a7fd2cb2f7dd4c764ead7f40d"> 281</a></span> <span class="keywordtype">bool</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9c833b9a7fd2cb2f7dd4c764ead7f40d">colour_buffer_dirty</a>;</div>
<div class="line"><a id="l00282" name="l00282"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3dbfe0d150cecf52181cba6c0c3ed027"> 282</a></span> <span class="keywordtype">bool</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3dbfe0d150cecf52181cba6c0c3ed027">value_buffer_dirty</a>;</div>
<div class="line"><a id="l00283" name="l00283"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac130490abce5b30355f4590c55238cc9"> 283</a></span> <span class="keywordtype">bool</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac130490abce5b30355f4590c55238cc9">threshold_buffer_dirty</a>;</div>
<div class="line"><a id="l00284" name="l00284"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8345a9be3f84a93229d160f5fe082cf8"> 284</a></span> <span class="keywordtype">bool</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8345a9be3f84a93229d160f5fe082cf8">dir_buffer_dirty</a>;</div>
<div class="line"><a id="l00285" name="l00285"></a><span class="lineno"> 285</span> </div>
<div class="line"><a id="l00286" name="l00286"></a><span class="lineno"> 286</span> <span class="keyword">private</span>:</div>
<div class="line"><a id="l00287" name="l00287"></a><span class="lineno"> 287</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel.html">Fixel</a>& fixel_tool;</div>
<div class="line"><a id="l00288" name="l00288"></a><span class="lineno"> 288</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> vertex_buffer;</div>
<div class="line"><a id="l00289" name="l00289"></a><span class="lineno"> 289</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> direction_buffer;</div>
<div class="line"><a id="l00290" name="l00290"></a><span class="lineno"> 290</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> colour_buffer;</div>
<div class="line"><a id="l00291" name="l00291"></a><span class="lineno"> 291</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> value_buffer;</div>
<div class="line"><a id="l00292" name="l00292"></a><span class="lineno"> 292</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> threshold_buffer;</div>
<div class="line"><a id="l00293" name="l00293"></a><span class="lineno"> 293</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_array_object.html">GL::VertexArrayObject</a> vertex_array_object;</div>
<div class="line"><a id="l00294" name="l00294"></a><span class="lineno"> 294</span> </div>
<div class="line"><a id="l00295" name="l00295"></a><span class="lineno"> 295</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_array_object.html">GL::VertexArrayObject</a> regular_grid_vao;</div>
<div class="line"><a id="l00296" name="l00296"></a><span class="lineno"> 296</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> regular_grid_vertex_buffer;</div>
<div class="line"><a id="l00297" name="l00297"></a><span class="lineno"> 297</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> regular_grid_dir_buffer;</div>
<div class="line"><a id="l00298" name="l00298"></a><span class="lineno"> 298</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> regular_grid_colour_buffer;</div>
<div class="line"><a id="l00299" name="l00299"></a><span class="lineno"> 299</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> regular_grid_val_buffer;</div>
<div class="line"><a id="l00300" name="l00300"></a><span class="lineno"> 300</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">GL::VertexBuffer</a> regular_grid_threshold_buffer;</div>
<div class="line"><a id="l00301" name="l00301"></a><span class="lineno"> 301</span> </div>
<div class="line"><a id="l00302" name="l00302"></a><span class="lineno"> 302</span> <span class="keywordtype">float</span> voxel_size_length_multipler;</div>
<div class="line"><a id="l00303" name="l00303"></a><span class="lineno"> 303</span> <span class="keywordtype">float</span> user_line_length_multiplier;</div>
<div class="line"><a id="l00304" name="l00304"></a><span class="lineno"> 304</span> <span class="keywordtype">float</span> line_thickness;</div>
<div class="line"><a id="l00305" name="l00305"></a><span class="lineno"> 305</span> };</div>
<div class="line"><a id="l00306" name="l00306"></a><span class="lineno"> 306</span> </div>
<div class="line"><a id="l00307" name="l00307"></a><span class="lineno"> 307</span> </div>
<div class="line"><a id="l00308" name="l00308"></a><span class="lineno"> 308</span> <span class="comment">// Wrapper to generically store fixel data</span></div>
<div class="line"><a id="l00309" name="l00309"></a><span class="lineno"> 309</span> </div>
<div class="line"><a id="l00310" name="l00310"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html"> 310</a></span> <span class="keyword">template</span> <<span class="keyword">typename</span> ImageType> <span class="keyword">class </span><a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html">FixelType</a> : <span class="keyword">public</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">BaseFixel</a></div>
<div class="line"><a id="l00311" name="l00311"></a><span class="lineno"> 311</span> { MEMALIGN (<a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html">FixelType<ImageType></a>)</div>
<div class="line"><a id="l00312" name="l00312"></a><span class="lineno"> 312</span> <span class="keyword">public</span>:</div>
<div class="line"><a id="l00313" name="l00313"></a><span class="lineno"> 313</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html">FixelType</a> (<span class="keyword">const</span> std::string& <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#ac975fb9af65b13ad36d12f8b900217da">filename</a>, <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel.html">Fixel</a>& fixel_tool) :</div>
<div class="line"><a id="l00314" name="l00314"></a><span class="lineno"> 314</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">BaseFixel</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#ac975fb9af65b13ad36d12f8b900217da">filename</a>, fixel_tool),</div>
<div class="line"><a id="l00315" name="l00315"></a><span class="lineno"> 315</span> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a50db000ef95ce897f62c7c859c1f46de">transform</a> (<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3829db6580926036c4b89eed3e2e2583">header</a>) { }</div>
<div class="line"><a id="l00316" name="l00316"></a><span class="lineno"> 316</span> </div>
<div class="line"><a id="l00317" name="l00317"></a><span class="lineno"> 317</span> <span class="keyword">protected</span>:</div>
<div class="line"><a id="l00318" name="l00318"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a890dd64ba70210280be034026be36a81"> 318</a></span> std::unique_ptr<ImageType> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a890dd64ba70210280be034026be36a81">fixel_data</a>;</div>
<div class="line"><a id="l00319" name="l00319"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a50db000ef95ce897f62c7c859c1f46de"> 319</a></span> <a class="code hl_class" href="class_m_r_1_1_transform.html">MR::Transform</a> <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a50db000ef95ce897f62c7c859c1f46de">transform</a>;</div>
<div class="line"><a id="l00320" name="l00320"></a><span class="lineno"> 320</span> </div>
<div class="line"><a id="l00321" name="l00321"></a><span class="lineno"><a class="line" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a963c25acee140a69d9a4226af8550b19"> 321</a></span> <span class="keywordtype">void</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a963c25acee140a69d9a4226af8550b19">request_update_interp_image_buffer</a> (<span class="keyword">const</span> <a class="code hl_class" href="class_m_r_1_1_g_u_i_1_1_projection.html">Projection</a>& projection)<span class="keyword"> override </span>{</div>
<div class="line"><a id="l00322" name="l00322"></a><span class="lineno"> 322</span> <a class="code hl_function" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7b579dc859d3fd7cd795867109b5ee9a">update_interp_image_buffer</a> (projection, *<a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a890dd64ba70210280be034026be36a81">fixel_data</a>, <a class="code hl_variable" href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a50db000ef95ce897f62c7c859c1f46de">transform</a>);</div>
<div class="line"><a id="l00323" name="l00323"></a><span class="lineno"> 323</span> }</div>
<div class="line"><a id="l00324" name="l00324"></a><span class="lineno"> 324</span> };</div>
<div class="line"><a id="l00325" name="l00325"></a><span class="lineno"> 325</span> </div>
<div class="line"><a id="l00326" name="l00326"></a><span class="lineno"><a class="line" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#ad3337eb5f1ea57d293759c617aa1d835"> 326</a></span> <span class="keyword">using</span> <a class="code hl_class" href="class_m_r_1_1_fixel_1_1_legacy_1_1_image.html">FixelLegacyType</a> = <a class="code hl_class" href="class_m_r_1_1_fixel_1_1_legacy_1_1_image.html">MR::Fixel::Legacy::Image<MR::Fixel::Legacy::FixelMetric></a>;</div>
<div class="line"><a id="l00327" name="l00327"></a><span class="lineno"><a class="line" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a1a9193e615b1cdcc87ae463baf4c2518"> 327</a></span> <span class="keyword">using</span> <a class="code hl_class" href="class_m_r_1_1_image.html">FixelImage4DType</a> = <a class="code hl_class" href="class_m_r_1_1_image.html">MR::Image<float></a>;</div>
<div class="line"><a id="l00328" name="l00328"></a><span class="lineno"><a class="line" href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#adc249fe5ae0f33616e57d2fd9faa9c32"> 328</a></span> <span class="keyword">using</span> <a class="code hl_class" href="class_m_r_1_1_image.html">FixelIndexImageType</a> = <a class="code hl_class" href="class_m_r_1_1_image.html">MR::Image<uint32_t></a>;</div>
<div class="line"><a id="l00329" name="l00329"></a><span class="lineno"> 329</span> }</div>
<div class="line"><a id="l00330" name="l00330"></a><span class="lineno"> 330</span> }</div>
<div class="line"><a id="l00331" name="l00331"></a><span class="lineno"> 331</span> }</div>
<div class="line"><a id="l00332" name="l00332"></a><span class="lineno"> 332</span>}</div>
<div class="line"><a id="l00333" name="l00333"></a><span class="lineno"> 333</span><span class="preprocessor">#endif</span></div>
<div class="ttc" id="aalgo_2loop_8h_html"><div class="ttname"><a href="algo_2loop_8h.html">loop.h</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_fixel_1_1_legacy_1_1_image_html"><div class="ttname"><a href="class_m_r_1_1_fixel_1_1_legacy_1_1_image.html">MR::Fixel::Legacy::Image</a></div><div class="ttdef"><b>Definition:</b> <a href="fixel_2legacy_2image_8h_source.html#l00099">image.h:100</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_array_object_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_array_object.html">MR::GUI::GL::VertexArrayObject</a></div><div class="ttdef"><b>Definition:</b> <a href="gl_8h_source.html#l00255">gl.h:255</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_g_l_1_1_vertex_buffer.html">MR::GUI::GL::VertexBuffer</a></div><div class="ttdef"><b>Definition:</b> <a href="gl_8h_source.html#l00220">gl.h:220</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_combo_box_with_error_msg_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_combo_box_with_error_msg.html">MR::GUI::MRView::ComboBoxWithErrorMsg</a></div><div class="ttdef"><b>Definition:</b> <a href="combo__box__error_8h_source.html#l00030">combo_box_error.h:31</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html">MR::GUI::MRView::Displayable</a></div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00062">displayable.h:63</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_html_a29eaf9c18bad2115a062606f9fbbe202"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#a29eaf9c18bad2115a062606f9fbbe202">MR::GUI::MRView::Displayable::value_max</a></div><div class="ttdeci">float value_max</div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00303">displayable.h:303</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_html_ac975fb9af65b13ad36d12f8b900217da"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#ac975fb9af65b13ad36d12f8b900217da">MR::GUI::MRView::Displayable::filename</a></div><div class="ttdeci">std::string filename</div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00302">displayable.h:302</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_html_afc49cfff61f8c3109f61b9ad48727e55"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable.html#afc49cfff61f8c3109f61b9ad48727e55">MR::GUI::MRView::Displayable::value_min</a></div><div class="ttdeci">float value_min</div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00303">displayable.h:303</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor.html">MR::GUI::MRView::DisplayableVisitor</a></div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00054">displayable.h:55</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor_html_a5fb6bfe653fd50741bc6d82d61e10b89"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_displayable_visitor.html#a5fb6bfe653fd50741bc6d82d61e10b89">MR::GUI::MRView::DisplayableVisitor::render_fixel_colourbar</a></div><div class="ttdeci">virtual void render_fixel_colourbar(const Tool::BaseFixel &)</div><div class="ttdef"><b>Definition:</b> <a href="displayable_8h_source.html#l00058">displayable.h:58</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html">MR::GUI::MRView::Tool::BaseFixel</a></div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00045">base_fixel.h:45</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a0553bc13a39ff2e0c10133034b868fbc"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0553bc13a39ff2e0c10133034b868fbc">MR::GUI::MRView::Tool::BaseFixel::load_image_buffer</a></div><div class="ttdeci">virtual void load_image_buffer()=0</div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a0953e6e4593e4b8668665a4c7da9dbac"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a0953e6e4593e4b8668665a4c7da9dbac">MR::GUI::MRView::Tool::BaseFixel::request_update_interp_image_buffer</a></div><div class="ttdeci">virtual void request_update_interp_image_buffer(const Projection &)=0</div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a26d5ba3e983ca256b966176fbfa8793a"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a26d5ba3e983ca256b966176fbfa8793a">MR::GUI::MRView::Tool::BaseFixel::get_fixel_value</a></div><div class="ttdeci">virtual FixelValue & get_fixel_value(const std::string &key) const</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00247">base_fixel.h:247</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a36c530de0f5fa5f8e7341308f4bc7df3"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a36c530de0f5fa5f8e7341308f4bc7df3">MR::GUI::MRView::Tool::BaseFixel::current_fixel_colour_state</a></div><div class="ttdeci">FixelValue & current_fixel_colour_state() const</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00243">base_fixel.h:243</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a3829db6580926036c4b89eed3e2e2583"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3829db6580926036c4b89eed3e2e2583">MR::GUI::MRView::Tool::BaseFixel::header</a></div><div class="ttdeci">MR::Header header</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00251">base_fixel.h:251</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a38cafd9d77bfa3f92c10d3a3ca4215c1"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a38cafd9d77bfa3f92c10d3a3ca4215c1">MR::GUI::MRView::Tool::BaseFixel::colour_type</a></div><div class="ttdeci">FixelColourType colour_type</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00275">base_fixel.h:275</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a3dbfe0d150cecf52181cba6c0c3ed027"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a3dbfe0d150cecf52181cba6c0c3ed027">MR::GUI::MRView::Tool::BaseFixel::value_buffer_dirty</a></div><div class="ttdeci">bool value_buffer_dirty</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00282">base_fixel.h:282</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a4084a68893139d1a88b63d85e28299b3"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4084a68893139d1a88b63d85e28299b3">MR::GUI::MRView::Tool::BaseFixel::threshold_type_index</a></div><div class="ttdeci">size_t threshold_type_index</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00279">base_fixel.h:279</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a4a2e8b8e0a3530d5cb0b8de4cd16cd09"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a4a2e8b8e0a3530d5cb0b8de4cd16cd09">MR::GUI::MRView::Tool::BaseFixel::current_fixel_value_state</a></div><div class="ttdeci">FixelValue & current_fixel_value_state() const</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00235">base_fixel.h:235</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a5094327b81781c7e5f37cd3d4a610594"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a5094327b81781c7e5f37cd3d4a610594">MR::GUI::MRView::Tool::BaseFixel::current_fixel_threshold_state</a></div><div class="ttdeci">FixelValue & current_fixel_threshold_state() const</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00239">base_fixel.h:239</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a51804d917f1e8a30d8ec845200673608"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a51804d917f1e8a30d8ec845200673608">MR::GUI::MRView::Tool::BaseFixel::regular_grid_buffer_threshold</a></div><div class="ttdeci">vector< float > regular_grid_buffer_threshold</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00265">base_fixel.h:265</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a55b35020e402c69bbcd7f95a904ef0b6"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a55b35020e402c69bbcd7f95a904ef0b6">MR::GUI::MRView::Tool::BaseFixel::scale_type_index</a></div><div class="ttdeci">size_t scale_type_index</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00278">base_fixel.h:278</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a71d5b094e6f52a1ecae33bfc488c89d6"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a71d5b094e6f52a1ecae33bfc488c89d6">MR::GUI::MRView::Tool::BaseFixel::regular_grid_buffer_dir</a></div><div class="ttdeci">vector< Eigen::Vector3f > regular_grid_buffer_dir</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00262">base_fixel.h:262</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a7ac4dbdd6b2ff54ac7c5479c3b881d1b"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7ac4dbdd6b2ff54ac7c5479c3b881d1b">MR::GUI::MRView::Tool::BaseFixel::threshold_types</a></div><div class="ttdeci">vector< std::string > threshold_types</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00254">base_fixel.h:254</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a7b579dc859d3fd7cd795867109b5ee9a"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7b579dc859d3fd7cd795867109b5ee9a">MR::GUI::MRView::Tool::BaseFixel::update_interp_image_buffer</a></div><div class="ttdeci">void update_interp_image_buffer(const Projection &, const MR::Header &, const MR::Transform &)</div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a7bd55044104537af11dbaf88e98abfb6"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a7bd55044104537af11dbaf88e98abfb6">MR::GUI::MRView::Tool::BaseFixel::update_image_buffers</a></div><div class="ttdeci">virtual void update_image_buffers()</div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a8345a9be3f84a93229d160f5fe082cf8"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8345a9be3f84a93229d160f5fe082cf8">MR::GUI::MRView::Tool::BaseFixel::dir_buffer_dirty</a></div><div class="ttdeci">bool dir_buffer_dirty</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00284">base_fixel.h:284</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a847149eaa2f099999667a4c0236bf991"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a847149eaa2f099999667a4c0236bf991">MR::GUI::MRView::Tool::BaseFixel::voxel_to_indices_map</a></div><div class="ttdeci">std::unordered_map< std::array< int, 3 >, vector< GLint >, IntPointHasher > voxel_to_indices_map</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00273">base_fixel.h:273</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a8b4e7f986e6dd1caad91030e87fbcf09"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a8b4e7f986e6dd1caad91030e87fbcf09">MR::GUI::MRView::Tool::BaseFixel::scale_type</a></div><div class="ttdeci">FixelScaleType scale_type</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00276">base_fixel.h:276</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a93201551d8957934f064bb7a2dd31fed"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a93201551d8957934f064bb7a2dd31fed">MR::GUI::MRView::Tool::BaseFixel::colour_types</a></div><div class="ttdeci">vector< std::string > colour_types</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00252">base_fixel.h:252</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a9c833b9a7fd2cb2f7dd4c764ead7f40d"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9c833b9a7fd2cb2f7dd4c764ead7f40d">MR::GUI::MRView::Tool::BaseFixel::colour_buffer_dirty</a></div><div class="ttdeci">bool colour_buffer_dirty</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00281">base_fixel.h:281</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_a9f2803fa11eddfa2c1d7e5ddcccccecb"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#a9f2803fa11eddfa2c1d7e5ddcccccecb">MR::GUI::MRView::Tool::BaseFixel::regular_grid_buffer_pos</a></div><div class="ttdeci">vector< Eigen::Vector3f > regular_grid_buffer_pos</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00261">base_fixel.h:261</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_aa2e937c4935b95e4f13a018897dd2c54"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa2e937c4935b95e4f13a018897dd2c54">MR::GUI::MRView::Tool::BaseFixel::value_types</a></div><div class="ttdeci">vector< std::string > value_types</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00253">base_fixel.h:253</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_aa5f8419248de62d2d71a35e60b1a6e40"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aa5f8419248de62d2d71a35e60b1a6e40">MR::GUI::MRView::Tool::BaseFixel::slice_fixel_counts</a></div><div class="ttdeci">vector< vector< GLsizei > > slice_fixel_counts</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00269">base_fixel.h:269</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_aaad323203cb549af172439136d8fe659"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#aaad323203cb549af172439136d8fe659">MR::GUI::MRView::Tool::BaseFixel::slice_fixel_indices</a></div><div class="ttdeci">vector< vector< vector< GLint > > > slice_fixel_indices</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00267">base_fixel.h:267</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_ab4ce9b714e736d08bad137d0cb8cd16f"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab4ce9b714e736d08bad137d0cb8cd16f">MR::GUI::MRView::Tool::BaseFixel::regular_grid_buffer_colour</a></div><div class="ttdeci">vector< float > regular_grid_buffer_colour</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00263">base_fixel.h:263</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_ab891da5fa3d89410980d14feecea1ccb"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ab891da5fa3d89410980d14feecea1ccb">MR::GUI::MRView::Tool::BaseFixel::slice_fixel_sizes</a></div><div class="ttdeci">vector< vector< vector< GLsizei > > > slice_fixel_sizes</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00268">base_fixel.h:268</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_abc5422a46ea60b121ab58b04ccb6a083"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abc5422a46ea60b121ab58b04ccb6a083">MR::GUI::MRView::Tool::BaseFixel::dummy_fixel_val_state</a></div><div class="ttdeci">FixelValue dummy_fixel_val_state</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00256">base_fixel.h:256</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_abca3a72653dcc202d1eca3c538527c2e"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#abca3a72653dcc202d1eca3c538527c2e">MR::GUI::MRView::Tool::BaseFixel::fixel_values</a></div><div class="ttdeci">std::map< const std::string, FixelValue > fixel_values</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00255">base_fixel.h:255</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_ac07b2927510b0b406e0701309f647b5e"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac07b2927510b0b406e0701309f647b5e">MR::GUI::MRView::Tool::BaseFixel::dir_buffer_store</a></div><div class="ttdeci">vector< Eigen::Vector3f > dir_buffer_store</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00259">base_fixel.h:259</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_ac130490abce5b30355f4590c55238cc9"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac130490abce5b30355f4590c55238cc9">MR::GUI::MRView::Tool::BaseFixel::threshold_buffer_dirty</a></div><div class="ttdeci">bool threshold_buffer_dirty</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00283">base_fixel.h:283</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_ac922d4489c3ccdb8212003680cbe9359"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#ac922d4489c3ccdb8212003680cbe9359">MR::GUI::MRView::Tool::BaseFixel::colour_type_index</a></div><div class="ttdeci">size_t colour_type_index</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00277">base_fixel.h:277</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_adc89de452fb3feb9453cf6e3dd341def"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#adc89de452fb3feb9453cf6e3dd341def">MR::GUI::MRView::Tool::BaseFixel::pos_buffer_store</a></div><div class="ttdeci">vector< Eigen::Vector3f > pos_buffer_store</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00258">base_fixel.h:258</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_html_af45d0a855db2f8f243a7b68758615c44"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel.html#af45d0a855db2f8f243a7b68758615c44">MR::GUI::MRView::Tool::BaseFixel::regular_grid_buffer_val</a></div><div class="ttdeci">vector< float > regular_grid_buffer_val</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00264">base_fixel.h:264</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel.html">MR::GUI::MRView::Tool::Fixel</a></div><div class="ttdef"><b>Definition:</b> <a href="gui_2mrview_2tool_2fixel_2fixel_8h_source.html#l00035">fixel.h:36</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html">MR::GUI::MRView::Tool::FixelType</a></div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00310">base_fixel.h:311</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type_html_a50db000ef95ce897f62c7c859c1f46de"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a50db000ef95ce897f62c7c859c1f46de">MR::GUI::MRView::Tool::FixelType::transform</a></div><div class="ttdeci">MR::Transform transform</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00319">base_fixel.h:319</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type_html_a890dd64ba70210280be034026be36a81"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a890dd64ba70210280be034026be36a81">MR::GUI::MRView::Tool::FixelType::fixel_data</a></div><div class="ttdeci">std::unique_ptr< ImageType > fixel_data</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00318">base_fixel.h:318</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type_html_a963c25acee140a69d9a4226af8550b19"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_type.html#a963c25acee140a69d9a4226af8550b19">MR::GUI::MRView::Tool::FixelType::request_update_interp_image_buffer</a></div><div class="ttdeci">void request_update_interp_image_buffer(const Projection &projection) override</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00321">base_fixel.h:321</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_g_u_i_1_1_projection_html"><div class="ttname"><a href="class_m_r_1_1_g_u_i_1_1_projection.html">MR::GUI::Projection</a></div><div class="ttdef"><b>Definition:</b> <a href="projection_8h_source.html#l00172">projection.h:173</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_header_html"><div class="ttname"><a href="class_m_r_1_1_header.html">MR::Header</a></div><div class="ttdef"><b>Definition:</b> <a href="header_8h_source.html#l00048">header.h:48</a></div></div>
<div class="ttc" id="aclass_m_r_1_1_image_html"><div class="ttname"><a href="class_m_r_1_1_image.html">MR::Image< float ></a></div></div>
<div class="ttc" id="aclass_m_r_1_1_transform_html"><div class="ttname"><a href="class_m_r_1_1_transform.html">MR::Transform</a></div><div class="ttdef"><b>Definition:</b> <a href="src_2gui_2mrview_2tool_2transform_8h_source.html#l00024">transform.h:24</a></div></div>
<div class="ttc" id="aclass_m_r_1_1vector_html"><div class="ttname"><a href="class_m_r_1_1vector.html">MR::vector< std::string ></a></div></div>
<div class="ttc" id="acore_2fixel_2helpers_8h_html"><div class="ttname"><a href="core_2fixel_2helpers_8h.html">helpers.h</a></div></div>
<div class="ttc" id="adisplayable_8h_html"><div class="ttname"><a href="displayable_8h.html">displayable.h</a></div></div>
<div class="ttc" id="afixel_2legacy_2image_8h_html"><div class="ttname"><a href="fixel_2legacy_2image_8h.html">image.h</a></div></div>
<div class="ttc" id="afixel__metric_8h_html"><div class="ttname"><a href="fixel__metric_8h.html">fixel_metric.h</a></div></div>
<div class="ttc" id="agroup__mathconstants_html_ga4bded66901b06bc4f71952e3cd3185ea"><div class="ttname"><a href="group__mathconstants.html#ga4bded66901b06bc4f71952e3cd3185ea">MR::Math::e</a></div><div class="ttdeci">constexpr double e</div><div class="ttdef"><b>Definition:</b> <a href="math_8h_source.html#l00039">math.h:39</a></div></div>
<div class="ttc" id="agroup__spherical__harmonics_html_gac405578b4137cf1c22a0cf646d260b05"><div class="ttname"><a href="group__spherical__harmonics.html#gac405578b4137cf1c22a0cf646d260b05">MR::Math::SH::value</a></div><div class="ttdeci">VectorType::Scalar value(const VectorType &coefs, typename VectorType::Scalar cos_elevation, typename VectorType::Scalar cos_azimuth, typename VectorType::Scalar sin_azimuth, int lmax)</div><div class="ttdef"><b>Definition:</b> <a href="_s_h_8h_source.html#l00233">SH.h:233</a></div></div>
<div class="ttc" id="agui_2mrview_2tool_2fixel_2fixel_8h_html"><div class="ttname"><a href="gui_2mrview_2tool_2fixel_2fixel_8h.html">fixel.h</a></div></div>
<div class="ttc" id="aheader_8h_html"><div class="ttname"><a href="header_8h.html">header.h</a></div></div>
<div class="ttc" id="aimage_8h_html"><div class="ttname"><a href="image_8h.html">image.h</a></div></div>
<div class="ttc" id="amemory_8h_html_a5d1aa93e600a93cee8523d1d34c1ace5"><div class="ttname"><a href="memory_8h.html#a5d1aa93e600a93cee8523d1d34c1ace5">NOMEMALIGN</a></div><div class="ttdeci">#define NOMEMALIGN</div><div class="ttdef"><b>Definition:</b> <a href="memory_8h_source.html#l00022">memory.h:22</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a22348cc42517686fa6f064cc14af1f80"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80">MR::GUI::MRView::Tool::FixelColourType</a></div><div class="ttdeci">FixelColourType</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00028">vector_structs.h:28</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a22348cc42517686fa6f064cc14af1f80a6abba1d41ef6f443ed72694191fd83ad"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a6abba1d41ef6f443ed72694191fd83ad">MR::GUI::MRView::Tool::Direction</a></div><div class="ttdeci">@ Direction</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00028">vector_structs.h:28</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a22348cc42517686fa6f064cc14af1f80a9a6956001eca206a84c339209c9da0bc">MR::GUI::MRView::Tool::CValue</a></div><div class="ttdeci">@ CValue</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00028">vector_structs.h:28</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a4bcbf30ba13504149d113663afc3f976"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976">MR::GUI::MRView::Tool::FixelScaleType</a></div><div class="ttdeci">FixelScaleType</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00029">vector_structs.h:29</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a4bcbf30ba13504149d113663afc3f976aaa6bb5826104284c0529c5b7ad1ae0fc"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976aaa6bb5826104284c0529c5b7ad1ae0fc">MR::GUI::MRView::Tool::Value</a></div><div class="ttdeci">@ Value</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00029">vector_structs.h:29</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_html_a4bcbf30ba13504149d113663afc3f976ad6bc906f68322d238ae91e4bad6b5fda"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool.html#a4bcbf30ba13504149d113663afc3f976ad6bc906f68322d238ae91e4bad6b5fda">MR::GUI::MRView::Tool::Unity</a></div><div class="ttdeci">@ Unity</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00029">vector_structs.h:29</a></div></div>
<div class="ttc" id="anamespace_m_r_1_1_g_u_i_html_a9b1b77877b492d7a1638364a3a94fc1b"><div class="ttname"><a href="namespace_m_r_1_1_g_u_i.html#a9b1b77877b492d7a1638364a3a94fc1b">MR::GUI::qstr</a></div><div class="ttdeci">QString qstr(const std::string &s)</div><div class="ttdef"><b>Definition:</b> <a href="gui_8h_source.html#l00031">gui.h:31</a></div></div>
<div class="ttc" id="anamespace_m_r_html"><div class="ttname"><a href="namespace_m_r.html">MR</a></div><div class="ttdef"><b>Definition:</b> <a href="core_2adapter_2base_8h_source.html#l00023">base.h:24</a></div></div>
<div class="ttc" id="aordered__thread__queue_8h_html_a3f42f10d93f6edb91d7d3f6edad25921"><div class="ttname"><a href="ordered__thread__queue_8h.html#a3f42f10d93f6edb91d7d3f6edad25921">index</a></div><div class="ttdeci">size_t index</div><div class="ttdef"><b>Definition:</b> <a href="ordered__thread__queue_8h_source.html#l00038">ordered_thread_queue.h:38</a></div></div>
<div class="ttc" id="asrc_2surface_2types_8h_html_a11d7eae3ab5178ebcf0e62cae9c26cd4"><div class="ttname"><a href="src_2surface_2types_8h.html#a11d7eae3ab5178ebcf0e62cae9c26cd4">MEMALIGN</a></div><div class="ttdeci">#define MEMALIGN(...)</div><div class="ttdef"><b>Definition:</b> <a href="src_2surface_2types_8h_source.html#l00185">types.h:185</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher_html"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html">MR::GUI::MRView::Tool::BaseFixel::IntPointHasher</a></div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00222">base_fixel.h:222</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher_html_a9588a6912c0336d3c94a1e5ba703dddb"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_base_fixel_1_1_int_point_hasher.html#a9588a6912c0336d3c94a1e5ba703dddb">MR::GUI::MRView::Tool::BaseFixel::IntPointHasher::operator()</a></div><div class="ttdeci">NOMEMALIGN size_t operator()(const std::array< int, 3 > &v) const</div><div class="ttdef"><b>Definition:</b> <a href="base__fixel_8h_source.html#l00223">base_fixel.h:223</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html">MR::GUI::MRView::Tool::FixelValue</a></div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00031">vector_structs.h:31</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_a177a786f6f06fbccdb03d6860f0e3370"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a177a786f6f06fbccdb03d6860f0e3370">MR::GUI::MRView::Tool::FixelValue::get_relative_threshold_lower</a></div><div class="ttdeci">float get_relative_threshold_lower(FixelValue &fixel_value) const</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00067">vector_structs.h:67</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_a17c0671fca29b2c16f8ab17622a0005d"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a17c0671fca29b2c16f8ab17622a0005d">MR::GUI::MRView::Tool::FixelValue::lessthan</a></div><div class="ttdeci">float lessthan</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00035">vector_structs.h:35</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_a4f961e063a252f686c3436142b6b3c00"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a4f961e063a252f686c3436142b6b3c00">MR::GUI::MRView::Tool::FixelValue::value_max</a></div><div class="ttdeci">float value_max</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00034">vector_structs.h:34</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_a7f9fedb3d3e09e5311e3a516d411e66a"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a7f9fedb3d3e09e5311e3a516d411e66a">MR::GUI::MRView::Tool::FixelValue::get_relative_threshold_upper</a></div><div class="ttdeci">float get_relative_threshold_upper(FixelValue &fixel_value) const</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00082">vector_structs.h:82</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_a8ea745b77c40b57395ac9d4bb2af773c"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#a8ea745b77c40b57395ac9d4bb2af773c">MR::GUI::MRView::Tool::FixelValue::greaterthan</a></div><div class="ttdeci">float greaterthan</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00035">vector_structs.h:35</a></div></div>
<div class="ttc" id="astruct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value_html_adeea3332612a9eb004ecd34fe829a879"><div class="ttname"><a href="struct_m_r_1_1_g_u_i_1_1_m_r_view_1_1_tool_1_1_fixel_value.html#adeea3332612a9eb004ecd34fe829a879">MR::GUI::MRView::Tool::FixelValue::value_min</a></div><div class="ttdeci">float value_min</div><div class="ttdef"><b>Definition:</b> <a href="vector__structs_8h_source.html#l00033">vector_structs.h:33</a></div></div>
<div class="ttc" id="avector__structs_8h_html"><div class="ttname"><a href="vector__structs_8h.html">vector_structs.h</a></div></div>
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