Cargo test fails in lightgbm3-sys

[havakv]

Hi, running the tests in the lightgbm3-sys crate fails. However, build work fine and both build and test work for lightgbm3.
Setup:

git clone --recursive https://github.com/Mottl/lightgbm3-rs.git
cd lightgbm3-rs
docker build -t lgbmrs .
docker run -it -v $PWD:/app lgbmrs bash

# inside container
cd lightgbm3-sys
cargo test # cargo build --tests give same error

Output

   Compiling lightgbm3-sys v1.0.2 (/app/lightgbm3-sys)
error: linking with `cc` failed: exit status: 1
  |
  = note: LC_ALL="C" PATH="/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/usr/local/cargo/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcD2lM6I/symbols.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.14i2jlz8l13fgnnc.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.1bt3533wpfaeamri.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.1e4nzjwfz4scuwt7.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.1nojqnak3g7h72vf.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.1scz84g5xp69s0v9.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.1u1frxgbos6zxlb8.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.28akzrrp8hknjz96.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.2rmo3pe1f2wj8yx8.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.2sg79lcv98ri7qy0.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.2tbankpz4n2lobo.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.32zwtwlevmu7u2nx.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.36jh89ndf398je8n.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.36u9mcbholjcusjb.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.3hsly1d0senj98h4.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.44wlrfgru0shc4dd.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.4623y3bwburf76r1.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.4n1wd7m5raeo96hb.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.54aux0hnpk2bnr48.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.5suqgozloq3gw5o.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.abs0l31qf2gu6ol.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.iewn3vfjb127mtf.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.u7ghnp4di0rhqip.rcgu.o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705.21vauhxm4wszh1ro.rcgu.o" "-Wl,--as-needed" "-L" "/app/lightgbm3-sys/target/debug/deps" "-L" "/app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib" "-L" "/app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out" "-L" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bdynamic" "-lstdc++" "-Wl,-Bstatic" "-Wl,--whole-archive" "-l_lightgbm" "-Wl,--no-whole-archive" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libtest-da8dbafd4eb32b5e.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgetopts-f710a6c4aea91573.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunicode_width-ec680785f16b10cf.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_std-e4d24bd7b0aba56e.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-d2ef02247056996e.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-fde67f6c4eccaa42.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-2549d0ec992a5666.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-bb9bfc0931d5cad0.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-7c0b91fdc4adc2c5.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-6ec164769e6c2957.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-95326caaef561554.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-704dba0df3717bb7.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-5f0117cb69112303.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-7a95907f1ed0cea5.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-d4aa666f8242aefc.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-9abec8861e966bc7.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-863ac378b60eeb30.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-fc8aa5b7d220f0a9.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-0cc850f1e941238d.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-f7b445210e88e768.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-f37052492751c579.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-fd15ec7f305d48e7.rlib" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-d700583125da6701.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/usr/local/rustup/toolchains/1.78.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/app/lightgbm3-sys/target/debug/deps/lightgbm3_sys-2c00bcc6e6b20705" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
  = note: /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(c_api.cpp.o): in function `_GLOBAL__sub_I_c_api.cpp':
          c_api.cpp:(.text.startup._GLOBAL__sub_I_c_api.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: c_api.cpp:(.text.startup._GLOBAL__sub_I_c_api.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(boosting.cpp.o): in function `_GLOBAL__sub_I_boosting.cpp':
          boosting.cpp:(.text.startup._GLOBAL__sub_I_boosting.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: boosting.cpp:(.text.startup._GLOBAL__sub_I_boosting.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(gbdt.cpp.o): in function `_GLOBAL__sub_I_gbdt.cpp':
          gbdt.cpp:(.text.startup._GLOBAL__sub_I_gbdt.cpp+0x18): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: gbdt.cpp:(.text.startup._GLOBAL__sub_I_gbdt.cpp+0x1f): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(gbdt_model_text.cpp.o): in function `_GLOBAL__sub_I_gbdt_model_text.cpp':
          gbdt_model_text.cpp:(.text.startup._GLOBAL__sub_I_gbdt_model_text.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: gbdt_model_text.cpp:(.text.startup._GLOBAL__sub_I_gbdt_model_text.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(gbdt_prediction.cpp.o): in function `_GLOBAL__sub_I_gbdt_prediction.cpp':
          gbdt_prediction.cpp:(.text.startup._GLOBAL__sub_I_gbdt_prediction.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: gbdt_prediction.cpp:(.text.startup._GLOBAL__sub_I_gbdt_prediction.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(prediction_early_stop.cpp.o): in function `_GLOBAL__sub_I_prediction_early_stop.cpp':
          prediction_early_stop.cpp:(.text.startup._GLOBAL__sub_I_prediction_early_stop.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: prediction_early_stop.cpp:(.text.startup._GLOBAL__sub_I_prediction_early_stop.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(sample_strategy.cpp.o): in function `_GLOBAL__sub_I_sample_strategy.cpp':
          sample_strategy.cpp:(.text.startup._GLOBAL__sub_I_sample_strategy.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: sample_strategy.cpp:(.text.startup._GLOBAL__sub_I_sample_strategy.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(bin.cpp.o): in function `_GLOBAL__sub_I_bin.cpp':
          bin.cpp:(.text.startup._GLOBAL__sub_I_bin.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: bin.cpp:(.text.startup._GLOBAL__sub_I_bin.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(config.cpp.o): in function `_GLOBAL__sub_I_config.cpp':
          config.cpp:(.text.startup._GLOBAL__sub_I_config.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: config.cpp:(.text.startup._GLOBAL__sub_I_config.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(config_auto.cpp.o): in function `_GLOBAL__sub_I_config_auto.cpp':
          config_auto.cpp:(.text.startup._GLOBAL__sub_I_config_auto.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: config_auto.cpp:(.text.startup._GLOBAL__sub_I_config_auto.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(dataset.cpp.o): in function `_GLOBAL__sub_I_dataset.cpp':
          dataset.cpp:(.text.startup._GLOBAL__sub_I_dataset.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: dataset.cpp:(.text.startup._GLOBAL__sub_I_dataset.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(dataset_loader.cpp.o): in function `_GLOBAL__sub_I_dataset_loader.cpp':
          dataset_loader.cpp:(.text.startup._GLOBAL__sub_I_dataset_loader.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: dataset_loader.cpp:(.text.startup._GLOBAL__sub_I_dataset_loader.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(file_io.cpp.o): in function `_GLOBAL__sub_I_file_io.cpp':
          file_io.cpp:(.text.startup._GLOBAL__sub_I_file_io.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: file_io.cpp:(.text.startup._GLOBAL__sub_I_file_io.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(json11.cpp.o): in function `_GLOBAL__sub_I_json11.cpp':
          json11.cpp:(.text.startup._GLOBAL__sub_I_json11.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: json11.cpp:(.text.startup._GLOBAL__sub_I_json11.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(metadata.cpp.o): in function `_GLOBAL__sub_I_metadata.cpp':
          metadata.cpp:(.text.startup._GLOBAL__sub_I_metadata.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: metadata.cpp:(.text.startup._GLOBAL__sub_I_metadata.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(parser.cpp.o): in function `_GLOBAL__sub_I_parser.cpp':
          parser.cpp:(.text.startup._GLOBAL__sub_I_parser.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: parser.cpp:(.text.startup._GLOBAL__sub_I_parser.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(train_share_states.cpp.o): in function `_GLOBAL__sub_I_train_share_states.cpp':
          train_share_states.cpp:(.text.startup._GLOBAL__sub_I_train_share_states.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: train_share_states.cpp:(.text.startup._GLOBAL__sub_I_train_share_states.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(tree.cpp.o): in function `_GLOBAL__sub_I_tree.cpp':
          tree.cpp:(.text.startup._GLOBAL__sub_I_tree.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: tree.cpp:(.text.startup._GLOBAL__sub_I_tree.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(dcg_calculator.cpp.o): in function `std::vector<double, std::allocator<double> >::~vector()':
          dcg_calculator.cpp:(.text._ZNSt6vectorIdSaIdEED2Ev[_ZNSt6vectorIdSaIdEED5Ev]+0x9): undefined reference to `operator delete(void*)'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(dcg_calculator.cpp.o): in function `_GLOBAL__sub_I_dcg_calculator.cpp':
          dcg_calculator.cpp:(.text.startup._GLOBAL__sub_I_dcg_calculator.cpp+0x18): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: dcg_calculator.cpp:(.text.startup._GLOBAL__sub_I_dcg_calculator.cpp+0x1f): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(metric.cpp.o): in function `_GLOBAL__sub_I_metric.cpp':
          metric.cpp:(.text.startup._GLOBAL__sub_I_metric.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: metric.cpp:(.text.startup._GLOBAL__sub_I_metric.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(linker_topo.cpp.o): in function `_GLOBAL__sub_I_linker_topo.cpp':
          linker_topo.cpp:(.text.startup._GLOBAL__sub_I_linker_topo.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: linker_topo.cpp:(.text.startup._GLOBAL__sub_I_linker_topo.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(linkers_socket.cpp.o): in function `_GLOBAL__sub_I_linkers_socket.cpp':
          linkers_socket.cpp:(.text.startup._GLOBAL__sub_I_linkers_socket.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: linkers_socket.cpp:(.text.startup._GLOBAL__sub_I_linkers_socket.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(network.cpp.o): in function `_GLOBAL__sub_I_network.cpp':
          network.cpp:(.text.startup._GLOBAL__sub_I_network.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: network.cpp:(.text.startup._GLOBAL__sub_I_network.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(objective_function.cpp.o): in function `_GLOBAL__sub_I_objective_function.cpp':
          objective_function.cpp:(.text.startup._GLOBAL__sub_I_objective_function.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: objective_function.cpp:(.text.startup._GLOBAL__sub_I_objective_function.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(data_parallel_tree_learner.cpp.o): in function `_GLOBAL__sub_I_data_parallel_tree_learner.cpp':
          data_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_data_parallel_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: data_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_data_parallel_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(feature_parallel_tree_learner.cpp.o): in function `_GLOBAL__sub_I_feature_parallel_tree_learner.cpp':
          feature_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_feature_parallel_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: feature_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_feature_parallel_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(gradient_discretizer.cpp.o): in function `_GLOBAL__sub_I_gradient_discretizer.cpp':
          gradient_discretizer.cpp:(.text.startup._GLOBAL__sub_I_gradient_discretizer.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: gradient_discretizer.cpp:(.text.startup._GLOBAL__sub_I_gradient_discretizer.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(linear_tree_learner.cpp.o): in function `_GLOBAL__sub_I_linear_tree_learner.cpp':
          linear_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_linear_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: linear_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_linear_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(serial_tree_learner.cpp.o): in function `_GLOBAL__sub_I_serial_tree_learner.cpp':
          serial_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_serial_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: serial_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_serial_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(tree_learner.cpp.o): in function `_GLOBAL__sub_I_tree_learner.cpp':
          tree_learner.cpp:(.text.startup._GLOBAL__sub_I_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: tree_learner.cpp:(.text.startup._GLOBAL__sub_I_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          /usr/bin/ld: /app/lightgbm3-sys/target/debug/build/lightgbm3-sys-d6641627808981d5/out/lib/lib_lightgbm.a(voting_parallel_tree_learner.cpp.o): in function `_GLOBAL__sub_I_voting_parallel_tree_learner.cpp':
          voting_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_voting_parallel_tree_learner.cpp+0xc): undefined reference to `std::ios_base::Init::Init()'
          /usr/bin/ld: voting_parallel_tree_learner.cpp:(.text.startup._GLOBAL__sub_I_voting_parallel_tree_learner.cpp+0x13): undefined reference to `std::ios_base::Init::~Init()'
          collect2: error: ld returned 1 exit status
          
  = note: some `extern` functions couldn't be found; some native libraries may need to be installed or have their path specified
  = note: use the `-l` flag to specify native libraries to link
  = note: use the `cargo:rustc-link-lib` directive to specify the native libraries to link with Cargo (see https://doc.rust-lang.org/cargo/reference/build-scripts.html#rustc-link-lib)

error: could not compile `lightgbm3-sys` (lib test) due to 1 previous error

Cargo version is

cargo 1.78.0 (54d8815d0 2024-03-26)

If I switch to nightly, the problem goes away, so maybe an issue with bindgen?

[Mottl]

Could you retry it with the latest commit?