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Add actions/checkout and r-lib setup to solve errors #88

Add actions/checkout and r-lib setup to solve errors

Add actions/checkout and r-lib setup to solve errors #88

Triggered via push January 30, 2025 11:18
Status Success
Total duration 16m 25s
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R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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2 errors and 30 warnings
macOS-latest (devel)
No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2
macOS-latest (devel)
No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2
macOS-latest (devel)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (devel)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (devel)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.4:
macOS-latest (devel)
qpdf 11.9.1 is already installed and up-to-date. To reinstall 11.9.1, run: brew reinstall qpdf
macOS-latest (devel)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (devel)
checkbashisms 2.25.1 is already installed and up-to-date. To reinstall 2.25.1, run: brew reinstall checkbashisms
macOS-latest (devel)
ghostscript 10.04.0 is already installed and up-to-date. To reinstall 10.04.0, run: brew reinstall ghostscript
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/bioc/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/data/experiment/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.4:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/books/bin/windows/contrib/4.4: