Minor error correction to pass tests

Novartis · Jan 29, 2025 · af69c5e · af69c5e
1 parent 6d85420
commit af69c5e
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/tests/testthat/test-define_expansion.R b/tests/testthat/test-define_expansion.R
@@ -27,7 +27,7 @@ test_data_prepared <- peakCombiner::prepare_input_regions(
 ### -----------------------------------------------------------------------###
 ##
 test_that("Test if function works with correct input", {
-  expect_no_error(define_expansion(
+  expect_no_error(peakCombiner:::define_expansion(
     data = test_data,
     expand_by = NULL
   ))

diff --git a/tests/testthat/test-filter_by_blacklist.R b/tests/testthat/test-filter_by_blacklist.R
@@ -26,7 +26,7 @@ test_data_center_expand <- peakCombiner::center_expand_regions(
   expand_by = NULL
 )
 ##
-test_data_filtered <- peakCombiner::filter_by_chromosome_names(
+test_data_filtered <- peakCombiner:::filter_by_chromosome_names(
   data = test_data_center_expand,
   include_by_chromosome_name = c("chr1", "chr10", "chr42")
 )

diff --git a/tests/testthat/test-prepare_input_regions.R b/tests/testthat/test-prepare_input_regions.R
@@ -91,7 +91,7 @@ test_that("Input column 'sample_name' is a class 'character'.", {
 ### -----------------------------------------------------------------------###
 
 test_that("Output data frame has the correct structure.", {
-  expect_no_error(peakCombiner::check_data_structure(test_data_prepared))
+  expect_no_error(peakCombiner:::check_data_structure(test_data_prepared))
 })
 
 test_that("Column names of output data are identical with required once.", {