remove unused code, added comments, simulation in lifelines

Novartis · Dec 13, 2024 · 0d3905b · 0d3905b
1 parent fbfdb99
commit 0d3905b
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Showing 2 changed files with 546 additions and 79 deletions.
diff --git a/docs/notebooks/loss_time_covariates.py b/docs/notebooks/loss_time_covariates.py
@@ -85,7 +85,7 @@ def _partial_likelihood_time_cox(
 
     #same step as in normal cox loss, just again, we consider Z(tau_j) where tau_j denotes event time to subject j
     log_denominator_tj = torch.logcumsumexp(log_hz_sorted_tj.flip(0), dim=0).flip(0)
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     return (log_hz_sorted_tj - log_denominator_tj)[event_sorted]
Original file line number	Diff line number	Diff line change
Expand Up		@@ -85,7 +85,7 @@ def _partial_likelihood_time_cox(

		#same step as in normal cox loss, just again, we consider Z(tau_j) where tau_j denotes event time to subject j
		log_denominator_tj = torch.logcumsumexp(log_hz_sorted_tj.flip(0), dim=0).flip(0)


		return (log_hz_sorted_tj - log_denominator_tj)[event_sorted]


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