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Missing MM and ML Tags in Output BAM File from Paraphase (3.2.1) #36

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shubhambinf1987 opened this issue Feb 24, 2025 · 1 comment
Open

Missing MM and ML Tags in Output BAM File from Paraphase (3.2.1) #36

shubhambinf1987 opened this issue Feb 24, 2025 · 1 comment

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@shubhambinf1987
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Hello,

I am currently using Paraphase version 3.2.1 and have encountered an issue. The output BAM file does not retain the MM and ML tags present in the input BAM file. Is there a way to configure Paraphase to preserve all input tags while also adding the HP tags?
@xiao-chen-xc
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Hi @shubhambinf1987 Yes I will add the tags in the next release.

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@xiao-chen-xc @shubhambinf1987