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@Rappsilber-Laboratory

Rappsilber Laboratory

Our mission is to develop approaches to study protein structure and interactions in cells and make them universally accessible and useful.

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  1. AlphaLink2 AlphaLink2 Public

    AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer

    Python 53 16

  2. XiSearch XiSearch Public

    XiSearch

    Java 11 7

  3. ProteomeHD ProteomeHD Public

    Forked from georgkus/ProteomeHD

    R scripts and data related to the manuscript "Co-regulation map of the human proteome enables identification of protein functions" by Kustatscher et al (https://www.nature.com/articles/s41587-019-0…

    R 8

  4. xiRT xiRT Public

    Multi-Dimensional Retention Time Prediction for Linear and Crosslinked Peptides

    Python 8 2

  5. xiFDR xiFDR Public

    Forked from lutzfischer/xiFDR

    Generic FDR-Calculation for cross-linked PSMs and resulting peptide pairs, links and protein pairs

    Java 6 3

  6. xiview xiview Public

    Forked from martingraham/CLMS-UI

    JavaScript 4 1

Repositories

Showing 10 of 45 repositories
  • xiRT Public

    Multi-Dimensional Retention Time Prediction for Linear and Crosslinked Peptides

    Rappsilber-Laboratory/xiRT’s past year of commit activity
    Python 8 Apache-2.0 2 4 6 Updated Feb 25, 2025
  • xiUtilities Public
    Rappsilber-Laboratory/xiUtilities’s past year of commit activity
    Python 0 0 0 0 Updated Feb 25, 2025
  • xiview-api Public Forked from PRIDE-Archive/xiview-api

    xiview-api provides REST endpoints to access crosslinking resources in PRIDE

    Rappsilber-Laboratory/xiview-api’s past year of commit activity
    Python 0 Apache-2.0 3 0 0 Updated Feb 14, 2025
  • preprocessing Public Forked from swlenz/preprocessing
    Rappsilber-Laboratory/preprocessing’s past year of commit activity
    Python 1 5 0 2 Updated Feb 13, 2025
  • xiFDR Public Forked from lutzfischer/xiFDR

    Generic FDR-Calculation for cross-linked PSMs and resulting peptide pairs, links and protein pairs

    Rappsilber-Laboratory/xiFDR’s past year of commit activity
    Java 6 Apache-2.0 5 14 0 Updated Feb 13, 2025
  • xi-mzidentml-converter Public Forked from lars-kolbowski/xiSPEC_ms_parser
    Rappsilber-Laboratory/xi-mzidentml-converter’s past year of commit activity
    Python 2 Apache-2.0 6 2 1 Updated Feb 12, 2025
  • AlphaLink2 Public

    AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer

    Rappsilber-Laboratory/AlphaLink2’s past year of commit activity
    Python 53 CC-BY-4.0 16 25 0 Updated Jan 22, 2025
  • xiSPEC_website Public Forked from lars-kolbowski/xiSPEC_website
    Rappsilber-Laboratory/xiSPEC_website’s past year of commit activity
    JavaScript 3 Apache-2.0 3 7 0 Updated Jan 8, 2025
  • build-xiview Public Forked from colin-combe/xiView_container
    Rappsilber-Laboratory/build-xiview’s past year of commit activity
    JavaScript 2 GPL-3.0 2 21 0 Updated Jan 8, 2025
  • xiview Public Forked from martingraham/CLMS-UI
    Rappsilber-Laboratory/xiview’s past year of commit activity
    JavaScript 4 GPL-2.0 6 8 0 Updated Jan 8, 2025
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