Include Vamb version in help text

RasmussenLab · Apr 28, 2022 · 3001ded · 3001ded
1 parent aeab6ec
commit 3001ded
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/vamb/__main__.py b/vamb/__main__.py
@@ -272,8 +272,10 @@ def run(outdir, fastapath, tnfpath, namespath, lengthspath, bampaths, rpkmpath,
     log('\nCompleted Vamb in {} seconds'.format(elapsed), logfile)
 
 def main():
-    doc = """Vamb: Variational autoencoders for metagenomic binning.
-
+    doc = f"""Vamb: Variational autoencoders for metagenomic binning.
+    
+    Version: {'.'.join([str(i) for i in vamb.__version__])}
+    
     Default use, good for most datasets:
     vamb --outdir out --fasta my_contigs.fna --bamfiles *.bam