From 73487bf36b0dd18a8170d53126c90bc41a1242da Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 11:01:07 +0000 Subject: [PATCH 01/67] C14Spyrou2018.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index cd53f644e..fe5022140 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 NA cal BP 95.4 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 NA cal BP 95.4 FALSE NA NA NA NA NA NA From 24bae5343445d35eff895772b3c72a71e9280654 Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 11:08:00 +0000 Subject: [PATCH 02/67] C14Spyrou2018.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index fe5022140..a5cbc0a7e 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 NA cal BP 95.4 FALSE NA NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 NA cal BP 95.4 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 95.4 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 95.4 FALSE NA NA NA NA NA NA From 8a014536ebc71009de23bdb3240a6c14e870f3c1 Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 11:44:43 +0000 Subject: [PATCH 03/67] C14Spyrou2018.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index a5cbc0a7e..8464a7c6c 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 95.4 FALSE NA NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 95.4 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA From 6a68df6a6bb2e04e68dc3e18a83986712e73ee84 Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 14:28:08 +0000 Subject: [PATCH 04/67] C14Warinner2014 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index cd53f644e..245546823 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,3 +3,4 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 TRUE TRUE . FALSE main text 1 10.1038/ng.2906 FALSE NA . NA . . NA NA NA -18.9 . . . TRUE NR CALIB NA . . NA NA NA NA . NA NA . NA . . . From 2e9346974a880c0f57f5b1d9862014420056ba92 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Thu, 6 Feb 2025 16:29:50 +0100 Subject: [PATCH 05/67] Use new command formatting ofr AMDiRT (#1350) --- assets/utility/autofill-wrapper.sh | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/assets/utility/autofill-wrapper.sh b/assets/utility/autofill-wrapper.sh index c9142fc04..0b4a18174 100644 --- a/assets/utility/autofill-wrapper.sh +++ b/assets/utility/autofill-wrapper.sh @@ -69,4 +69,5 @@ if ${verbose}; then echo "" fi -AMDirT autofill -n "$table_name" $hits -l TEMPLATE_"$project_name"_"$table_name"_libraries.tsv +amdirt autofill -n "$table_name" $hits -l TEMPLATE_"$project_name"_"$table_name"_libraries.tsv + From 9360e8c06387f70745aef0ea5d6384cec081bf19 Mon Sep 17 00:00:00 2001 From: aidaanva Date: Thu, 6 Feb 2025 17:30:39 +0100 Subject: [PATCH 06/67] added new NA value for strings --- ...glegenome-hostassociated_dates_schema.json | 60 +++++++++---------- assets/documentation/dates/README.md | 57 ++++++++++-------- 2 files changed, 62 insertions(+), 55 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json index 7896ca87d..319892d76 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json @@ -115,33 +115,33 @@ "$id": "#/items/properties/date_is_radiocarbon", "type": "string", "title": "Is Date Radiocarbon?", - "pattern": "TRUE|FALSE|NA|NR", + "pattern": "TRUE|FALSE|DNE|NR", "description": "Whether a sample has a specific radiocarbon date reported (e.g. 1245, not 15th Century or similar)", - "examples": ["TRUE", "FALSE", "NR", "NA"] + "examples": ["TRUE", "FALSE", "NR", "DNE"] }, "archaeological_historical_date": { "$id": "#/items/properties/archaeological_historical_date", - "type": [ "string", "null"], + "type": [ "string"], "title": "Archaeological or historical date range or singular date", - "pattern": "[0-9]+-*[0-9]+|NA", + "pattern": "[0-9]+-*[0-9]+|DNE", "description": "Archaeological or historical date range or singular date. The unit of time is Before Present (before 1950, BP)", - "examples": ["500-550", "35", "NA"] + "examples": ["500-550", "35", "DNE"] }, "multiple_dates": { "$id": "#/items/properties/multiple_dates", "type": "string", "title": "Multiple Direct Dates Present?", - "pattern": "TRUE|FALSE|NA", + "pattern": "TRUE|FALSE|DNE", "description": "Whether multiple (direct) dates are present for this sample; if so make multiple rows for the sample with one date per row.", - "examples": ["true", "false", "NA"] + "examples": ["true", "false", "DNE"] }, "reference_location": { "$id": "#/items/properties/reference_location", "type": "string", "title": "Location of Reference to Date", - "pattern": "main text|supplement text|supplement table|NA", + "pattern": "main text|supplement text|supplement table|DNE", "description": "First place where the precise-radiocarbon date was recorded in the primary citation publication (i.e, the publication in ancientMetagenomeDir). main text > supplementary text > supplmentary table.", - "examples": ["main text", "supplement text", "supplement table", "NA"] + "examples": ["main text", "supplement text", "supplement table", "DNE"] }, "reference_citation_depth": { "$id": "#/items/properties/reference_citation_depth", @@ -156,15 +156,15 @@ "type": "string", "title": "Digital Object Identifier (DOI) of the publication that the uncalibrated date was originally reported.", "description": "DOI of the primary or secondary reference (i.e. the DOI of the publication in which the date was original reported) or permalink", - "examples": ["10.1038/ng.2906", "https://www.jstor.org/stable/j.ctv270kvmk", "Unknown", "NA"] + "examples": ["10.1038/ng.2906", "https://www.jstor.org/stable/j.ctv270kvmk", "Unknown", "DNE"] }, "direct_dating": { "$id": "#/items/properties/direct_dating", "type": "string", "title": "Date Directly from Sample?", - "pattern": "TRUE|FALSE|NA|NR", + "pattern": "TRUE|FALSE|DNE|NR", "description": "Whether the date of the ancient metagenomic sample was directly from the same skeleton (or similar), or whether inferred from other samples in the same context", - "examples": ["TRUE", "FALSE", "NA", "NR"] + "examples": ["TRUE", "FALSE", "DNE", "NR"] }, "radiocarbon_lab_code": { "$id": "#/items/properties/radiocarbon_lab_sample_id", @@ -172,7 +172,7 @@ "title": "Radiocarbon Lab Sample ID", "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_lab_code.json", "description": "Lab code of the date, from https://radiocarbon.webhost.uits.arizona.edu/sites/default/files/2025-01/Labs-2025_01_16.pdf NA is no date available, NR is date available but no lab code", - "examples": ["OxA", "ANAS", "Beta", "NR", "NA"] + "examples": ["OxA", "ANAS", "Beta", "NR", "DNE"] }, "radiocarbon_lab_sample_id": { "$id": "#/items/properties/radiocarbon_lab_sample_id", @@ -187,15 +187,15 @@ "title": "Delta 13C measurement method.", "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_spectometry_type.json", "description": "Which spectrophotometry method was used to measure the delta carbon-13 value, either with Isotope Ratio Mass Spectrometer (IRMS) or Accelerated Mass Spectrometer (AMS).", - "examples": ["AMS", "IMRS", "NR", "NA"] + "examples": ["AMS", "IMRS", "NR", "DNE"] }, "pretreatment_reported":{ "$id": "#/items/properties/pretreatment_reported", "type": "string", "title": "Is Preatreatmnet Reported?", - "pattern": "TRUE|FALSE|NR|NA", + "pattern": "TRUE|FALSE|NR|DNE", "description": "Is a pretreatment reported?", - "examples": ["TRUE", "FALSE", "NA", "NR"] + "examples": ["TRUE", "FALSE", "DNE", "NR"] }, "pretreatment_type":{ "$id": "#/items/properties/pretreatment_type", @@ -260,9 +260,9 @@ "$id": "#/items/properties/calibration_reported", "type": "string", "title": "Is Calibration Reported?", - "pattern": "TRUE|FALSE|NA", + "pattern": "TRUE|FALSE|DNE", "description": "Whether the date has additionally been calibrated.", - "examples": ["TRUE", "FALSE", "NA"] + "examples": ["TRUE", "FALSE", "DNE"] }, "calibration_curve": { "$id": "#/items/properties/calibration_curve", @@ -270,7 +270,7 @@ "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_calibration_curve.json", "title": "Calibration Curve", "description": "The tree-ring calibration curve used for calibration.", - "examples": ["IntCal20", "CalPal2007_HULU", "SHCal20", "Marine20", "NR", "NA"] + "examples": ["IntCal20", "CalPal2007_HULU", "SHCal20", "Marine20", "NR", "DNE"] }, "calibration_software": { "$id": "#/items/properties/calibration_software", @@ -278,29 +278,29 @@ "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_calibration_software.json", "title": "Calibration Software", "description": "Software used for radiocarbon calibration.", - "examples": ["OxCal", "CalPal", "NR", "NA"] + "examples": ["OxCal", "CalPal", "NR", "DNE"] }, "calibration_software_version": { "$id": "#/items/properties/calibration_software_version", "type": "string", "title": "Calibration Software", "description": "Which version of the calibration software used, (set NR if not reported)", - "examples": ["v1.20", "0.35", "NR", "NA"] + "examples": ["v1.20", "0.35", "NR", "DNE"] }, "calibration_software_settings": { "$id": "#/items/properties/calibration_software_settings", "type": "string", "title": "Calibration Software settings", "description": "Settings used with the calibration software, (set NR if not reported)", - "examples": ["default", "-m 10", "NR", "NA"] + "examples": ["default", "-m 10", "NR", "DNE"] }, "calibration_software_citation_doi": { "$id": "#/items/properties/calibration_software_citation_doi", "type": "string", - "pattern": "^10.\\d{4,9}\\/[^,]+$|NR|NA", + "pattern": "^10.\\d{4,9}\\/[^,]+$|NR|DNE", "title": "Digital Object Identifier (DOI) of the radiocarbon calibration software publication.", "description": "A valid DOI code (not as an URL).", - "examples": ["10.1038/ng.2906", "NA"] + "examples": ["10.1038/ng.2906", "DNE"] }, "calibrated_range_lower": { "$id": "#/items/properties/calibrated_range_lower", @@ -329,7 +329,7 @@ "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_calibrated_range_suffix.json", "title": "Suffix of the calibrated date range", "description": "The suffix of the calibrated date range", - "examples": ["cal BP", "NA"] + "examples": ["cal BP", "DNE"] }, "calibrated_range_sigma": { "$id": "#/items/properties/calibrated_range_sigma", @@ -342,9 +342,9 @@ "$id": "#/items/properties/reservoir_offset_mentioned", "type": "string", "title": "Is Reservoir Offset Mentioned?", - "pattern": "TRUE|FALSE|NA", + "pattern": "TRUE|FALSE|DNE", "description": "If radiocarbon C14 reservoir offset mentioned in any form. False here corresponds to not recorded (NR)", - "examples": ["TRUE", "FALSE", "NA"] + "examples": ["TRUE", "FALSE", "DNE"] }, "reservoir_offset_applied": { "$id": "#/items/properties/reservoir_offset_applied", @@ -355,11 +355,11 @@ }, "reservoir_offset_type": { "$id": "#/items/properties/reservoir_offset_type", - "type": ["string","null"], - "pattern": "FRESHWATER|MARINE|NR|NA", + "type": ["string"], + "pattern": "FRESHWATER|MARINE|NR|DNE", "title": "Is the reported Reservoir Effect of Marine or Freshwater nature?", "description": "Specify if the reported reservoir effect is of marine or freshwater origin.", - "examples": ["FRESHWATER","MARINE","NR", "NA"] + "examples": ["FRESHWATER","MARINE","NR", "DNE"] }, "reservoir_offset_reported": { "$id": "#/items/properties/reservoir_offset_reported", diff --git a/assets/documentation/dates/README.md b/assets/documentation/dates/README.md index f80d391eb..8df4c89a9 100644 --- a/assets/documentation/dates/README.md +++ b/assets/documentation/dates/README.md @@ -124,9 +124,11 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Whether the precise date reported in the paper is a radiocarbon date. -- When not reported please specify `NR` and when not applicable `NA` (e.g. in case no precise dating was reported). +- When not reported please specify `NR` -- Accepted values for this column are: `TRUE`, `FALSE`, `NR` or `NA`. +- Whe no precise dating is reported specify `DNE` + +- Accepted values for this column are: `TRUE`, `FALSE`, `NR` or `DNE`. > ⚠️ Mandatory value @@ -136,9 +138,9 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - The date must be reported in years Before Present (BP), understanding present as 1950. -- When reported date is radiocarbon date please specify `NA`. +- When reported date is radiocarbon date please specify `DNE`. -- Missing value: `NA` +- Missing value: `DNE` ## multiple_dates @@ -146,16 +148,16 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - If this is the case, please create multiple rows for that sample with all the radiocarbon dates reported. -- Missing value: `NA` +- Missing value: `DNE` ## reference_location -- Location or first place where the precise-radiocarbon date was recorded in the primary citation publication (i.e, the publication in ancientMetagenomeDir): +- Location or first place where the precise-radiocarbon date was recorded in the primary citation publication (i.e, the publication in AncientMetagenomeDir): - Main text. - Supplement text. - Supplement table. -- Missing value: `NA` +- Missing value: `DNE` ## reference_citation_depth @@ -164,9 +166,9 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `2`: the date was published in an earlier study. - `3`: the date was published in a different publication from the secondary citation. - `Unknown`: when it is unsure where the date was published. - - `NA`: for samples were not dating information is available. + - `DNE`: for samples were not dating information is available. -- Missing value: `Unknown` or `NA`. +- Missing value: `Unknown` or `DNE`. ## primary_secondary_reference_citation_doi @@ -177,9 +179,9 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Specify: - `Unknown` when `reference_citation_depth` is set to `Unknown`. - - `NA` for samples were not dating information is available. + - `DNE` for samples were not dating information is available. -- Missing value: `Unknown` or `NA`. +- Missing value: `Unknown` or `DNE`. ## direct_dating @@ -189,13 +191,16 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `TRUE` - `FALSE` - `NR`: for studies where this is not reported - - `NA`: for samples where there is not radiocarbon dating. + - `DNE`: for samples where there is not radiocarbon dating. ## radiocarbon_lab_code - Lab code for the radiocarbon lab where the dating was produced. - The lab codes were extracted from https://radiocarbon.webhost.uits.arizona.edu/sites/default/files/2025-01/Labs-2025_01_16.pdf +- Specify `NR` for studies where this is not reported +- Specify `DNE` for samples where there is not radiocarbon dating. + > ⚠️ Must follow categories specified in `assets/enums/.json` > if the radiocarbon lab where the data was produced is not in this list, please ping > @spaam-community/ancientmetagenomedir-coreteam @@ -220,7 +225,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Specify: -`NR` when this is not reported. - -`NA` when the sample has no radiocarbon date. + -`DNE` when the sample has no radiocarbon date. > ⚠️ Must follow categories specified in `assets/enums/.json` > if the type of spectrometry used is not in this list, please ping @@ -237,7 +242,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `NR`: pretreatment not reported or unsure whether a pretreatment was applied - - `NA`: date is not a radiocarbon date + - `DNE`: date is not a radiocarbon date ## pretreatment_type @@ -267,7 +272,8 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Alphacellulose -- Missing value: `NA` +- Missing value: `Unknown` +- Specify `DNE` for samples that have not been radiocarbon dated. ## sample_material @@ -280,6 +286,8 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - For host-associated single genome list only: - If genome is derived from multiple tissue types from the same individual (e.g. bone and soft tissue) then the entry should simply be listed as 'tissue' +- Specify `unknown` for samples that have not been radiocarbon dated. + > ⚠️ Partly [MIxS v5](https://gensc.org/mixs/) compliant field, i.e. term > from an [ontology](https://www.ebi.ac.uk/ols/index), and ideally either > [UBERON](https://www.ebi.ac.uk/ols/ontologies/uberon) (anatomy) or @@ -356,13 +364,13 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `TRUE` - `FALSE` -- `NA` should be used when date is not radiocarbon date. +- `DNE` should be used when date is not radiocarbon date. ## calibration_curve - The tree-ring calibration curve used for calibration. -- `NA` should be used when date is not radiocarbon date. +- `DNE` should be used when date is not radiocarbon date. > ⚠️ Must follow categories specified in `assets/enums/.json` > if a different calibration curves is used, please ping @@ -374,7 +382,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - When the calibration software is not reported please specify `NR`. -- `NA` should be used when date is not radiocarbon date. +- `DNE` should be used when date is not radiocarbon date. > ⚠️ Must follow categories specified in `assets/enums/.json` > if a different calibration software is used, please ping @@ -386,7 +394,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - set `NR` if not reported -- `NA` should be used when date is not radiocarbon date. +- `DNE` should be used when date is not radiocarbon date. ## calibration_software_settings @@ -396,7 +404,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `NR` should if it is not reported. -- `NA` should be used when date is not radiocarbon date. +- `DNE` should be used when date is not radiocarbon date. ## calibration_software_citation_doi @@ -406,7 +414,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Specify: - `NR` when calibration is reported but no calibration software is mentioned. - - `NA` when date is not radiocarbon date or no calibration is reported. + - `DNE` when date is not radiocarbon date or no calibration is reported. ## calibrated_range_lower @@ -437,7 +445,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - The suffix of the calibrated date range, usually reported with calibrated or cal. before the time unit, e.g. cal BC or cal BP. -- `NA` should be used when date is not radiocarbon date or no calibration has been reported. +- `DNE` should be used when date is not radiocarbon date or no calibration has been reported. > ⚠️ Must follow categories specified in `assets/enums/.json` > if a different calibration range suffix is used, please ping @@ -465,8 +473,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - `TRUE`: a reservoir effect is mentioned in any form in the publication. - `FALSE`: here corresponds to not recorded (NR) -- Specify `NA` if: - - Date is not a radiocarbon date +- Specify `DNE` if date is not a radiocarbon date ## reservoir_offset_applied @@ -491,7 +498,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Specify: - `NR` when reservoir effect has been reported but the type is not mentioned. - - `NA` if not reservoir effect reported/mentioned or if date is not a radiocarbon date. + - `DNE` if not reservoir effect reported/mentioned or if date is not a radiocarbon date. ## reservoir_offset_reported From 6bff9bcb65aa2a4e99b3e615041e96d4f7a92ca6 Mon Sep 17 00:00:00 2001 From: aidaanva Date: Thu, 6 Feb 2025 17:57:51 +0100 Subject: [PATCH 07/67] Updated enums for C14 extension --- assets/enums/c14_calibrated_range_suffix.json | 4 +-- assets/enums/c14_calibration_curve.json | 6 ++-- assets/enums/c14_calibration_software.json | 6 ++-- assets/enums/c14_lab_code.json | 33 +++++++++++++++++-- assets/enums/c14_reservoir_offset_type.json | 6 ++-- assets/enums/c14_spectometry_type.json | 6 ++-- 6 files changed, 44 insertions(+), 17 deletions(-) diff --git a/assets/enums/c14_calibrated_range_suffix.json b/assets/enums/c14_calibrated_range_suffix.json index ad46be44b..343907ed3 100644 --- a/assets/enums/c14_calibrated_range_suffix.json +++ b/assets/enums/c14_calibrated_range_suffix.json @@ -1,10 +1,10 @@ { "enum": [ + "DNE", "cal AD", "cal BC", "cal CE", "cal BCE", - "cal BP", - "NA" + "cal BP" ] } \ No newline at end of file diff --git a/assets/enums/c14_calibration_curve.json b/assets/enums/c14_calibration_curve.json index e2946c794..207332195 100644 --- a/assets/enums/c14_calibration_curve.json +++ b/assets/enums/c14_calibration_curve.json @@ -1,10 +1,10 @@ { "enum": [ + "DNE", + "NR", "IntCal20", "CalPal2007_HULU", "SHCal20", - "Marine20", - "NR", - "NA" + "Marine20" ] } \ No newline at end of file diff --git a/assets/enums/c14_calibration_software.json b/assets/enums/c14_calibration_software.json index 7a71f08fa..793faaa26 100644 --- a/assets/enums/c14_calibration_software.json +++ b/assets/enums/c14_calibration_software.json @@ -1,8 +1,8 @@ { "enum": [ - "OxCal", - "CalPal", + "DNE", "NR", - "NA" + "OxCal", + "CalPal" ] } diff --git a/assets/enums/c14_lab_code.json b/assets/enums/c14_lab_code.json index 970ef6310..5919ff601 100644 --- a/assets/enums/c14_lab_code.json +++ b/assets/enums/c14_lab_code.json @@ -1,6 +1,6 @@ { "enum": [ - "NA", + "DNE", "NR", "A", "AA", @@ -11,12 +11,15 @@ "ALG", "ANAS", "ANL", + "ANSTO", "ANTW", "ANU", "ANUA", "AU", "AURIS", + "AWI", "B", + "BA", "Ba", "BC", "BE", @@ -58,6 +61,7 @@ "DK", "DRI", "DSA", + "DSH", "ENEA", "Erl", "ETH", @@ -72,7 +76,7 @@ "GAK", "Gd", "GD", - "GdA,", + "GdA,GdS", "Gif", "GifA", "GIN", @@ -119,9 +123,14 @@ "IVAN", "IVIC", "IWP", + "J", "JAT", + "JGS", + "JUBR", "K", + "KAERI", "KATRI", + "KCP", "KEEA", "KGM", "Ki", @@ -140,6 +149,8 @@ "LEMA", "LIH", "LJ", + "LOP", + "LP", "LTL", "LU", "Lu", @@ -155,7 +166,13 @@ "MAMS", "MC", "METU", + "MI", "MKL", + "ML", + "Mo", + "MOC", + "MP", + "MPI", "MTC", "N", "NIST", @@ -211,6 +228,7 @@ "Riga", "RL", "RoAMS", + "Rome", "RT", "RTK", "RU", @@ -226,8 +244,17 @@ "SM", "SMU", "SNU", + "SOAN", + "SRR", "SPb", + "St", + "Su", + "SUA", + "SUERC", + "SWA", "T", + "Ta", + "TAM", "TB", "TBNC", "TEM", @@ -260,7 +287,6 @@ "ULA", "UM", "UNAM", - "und", "UNSW", "UOC", "UQ", @@ -273,6 +299,7 @@ "UZH", "V", "VERA", + "VIE", "VRI", "Vs", "W", diff --git a/assets/enums/c14_reservoir_offset_type.json b/assets/enums/c14_reservoir_offset_type.json index ee6e92cd6..bc952b880 100644 --- a/assets/enums/c14_reservoir_offset_type.json +++ b/assets/enums/c14_reservoir_offset_type.json @@ -1,8 +1,8 @@ { "enum":[ + "DNE", + "NR", "MARINE", - "FRESHWATER", - "NR", - "NA" + "FRESHWATER" ] } \ No newline at end of file diff --git a/assets/enums/c14_spectometry_type.json b/assets/enums/c14_spectometry_type.json index 5b1affbe1..367fb294e 100644 --- a/assets/enums/c14_spectometry_type.json +++ b/assets/enums/c14_spectometry_type.json @@ -1,8 +1,8 @@ { "enum": [ + "DNE", + "NR", "AMS", - "IMRS", - "NA", - "NR" + "IMRS" ] } \ No newline at end of file From cb9d7804cdfb129804ff7e9a62751b1d901577ff Mon Sep 17 00:00:00 2001 From: aidaanva Date: Thu, 6 Feb 2025 18:12:16 +0100 Subject: [PATCH 08/67] fix string for missing values --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 8 ++++---- .../ancientsinglegenome-hostassociated_dates_schema.json | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index cd53f644e..c581b456f 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA DNE NA NA NA NA diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json index 319892d76..77e13c8d1 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json @@ -356,7 +356,7 @@ "reservoir_offset_type": { "$id": "#/items/properties/reservoir_offset_type", "type": ["string"], - "pattern": "FRESHWATER|MARINE|NR|DNE", + "$ref": "https://spaam-community.github.io/AncientMetagenomeDir/assets/enums/c14_reservoir_offset_type.json", "title": "Is the reported Reservoir Effect of Marine or Freshwater nature?", "description": "Specify if the reported reservoir effect is of marine or freshwater origin.", "examples": ["FRESHWATER","MARINE","NR", "DNE"] From 1bcb6470616b5c2d237a94ed1b4cd15bcba20f5d Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 18:04:27 +0000 Subject: [PATCH 09/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index c581b456f..e3939c35f 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA DNE NA NA NA NA +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE DNE DNE DNE DNE +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE DNE DNE DNE DNE +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE DNE DNE DNE DNE +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE DNE DNE DNE DNE From cbc9aad214ff804c4340e5a47cdbdac8691350f7 Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Thu, 6 Feb 2025 18:20:04 +0000 Subject: [PATCH 10/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index e3939c35f..172d6e3d0 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,5 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE DNE DNE DNE DNE -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE DNE DNE DNE DNE -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE DNE DNE DNE DNE -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE DNE DNE DNE DNE +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA From 6a8832da1475e401270c9bae48a47527d1049c71 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Thu, 6 Feb 2025 19:31:43 +0100 Subject: [PATCH 11/67] Apply suggestions from code review Co-authored-by: KaHea-21 --- assets/documentation/dates/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/assets/documentation/dates/README.md b/assets/documentation/dates/README.md index 8df4c89a9..03d35f6b9 100644 --- a/assets/documentation/dates/README.md +++ b/assets/documentation/dates/README.md @@ -126,7 +126,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - When not reported please specify `NR` -- Whe no precise dating is reported specify `DNE` +- When no precise dating is reported specify `DNE` - Accepted values for this column are: `TRUE`, `FALSE`, `NR` or `DNE`. From ce9e85e109187daa3a5fd6b1bdd0f4bd7c960a04 Mon Sep 17 00:00:00 2001 From: aidaanva Date: Thu, 6 Feb 2025 19:38:34 +0100 Subject: [PATCH 12/67] modified boolean to string --- .../ancientsinglegenome-hostassociated_dates_schema.json | 5 +++-- assets/documentation/dates/README.md | 2 +- 2 files changed, 4 insertions(+), 3 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json index 77e13c8d1..7c1603628 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json @@ -348,10 +348,11 @@ }, "reservoir_offset_applied": { "$id": "#/items/properties/reservoir_offset_applied", - "type": ["boolean", "null"], + "type": ["string"], + "pattern": "TRUE|FALSE|DNE", "title": "Is Reservoir Offset Applied?", "description": "If an offset correction or recalibration has been reported to have been applied ", - "examples": ["TRUE", "FALSE", "NA"] + "examples": ["TRUE", "FALSE", "DNE"] }, "reservoir_offset_type": { "$id": "#/items/properties/reservoir_offset_type", diff --git a/assets/documentation/dates/README.md b/assets/documentation/dates/README.md index 03d35f6b9..e9645ad39 100644 --- a/assets/documentation/dates/README.md +++ b/assets/documentation/dates/README.md @@ -481,7 +481,7 @@ The SRS code is to the left of the SAMEA-like code under the **sample:** field - Accepted values: `TRUE` or `FALSE` -- Specify `NA` if: +- Specify `DNE` if: - Date is not a radiocarbon date From 9536682a9b2dac2a85e514f3424a18345362ed8a Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Fri, 7 Feb 2025 09:21:38 +0000 Subject: [PATCH 13/67] c14 deBarrosDamgaard2018 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 ++ 1 file changed, 2 insertions(+) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 172d6e3d0..e9706a626 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,3 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE . FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA-31214 . AMS . . 1783 29 -16.3 . . . NA DNE DNE DNE . . 261 214 NA cal AD/BC . FALSE DNE . NA . . . +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE . DNE DNE DNE DNE DNE DNE . DNE . . DNE NA NA NA . . . TRUE IntCal13 SwissCal 1 . . NA NA NA DNE . FALSE DNE . NA . . . From 25c73ead3c65bf77c8c123233c4215fc171800bc Mon Sep 17 00:00:00 2001 From: KaHea-21 Date: Fri, 7 Feb 2025 09:30:14 +0000 Subject: [PATCH 14/67] C14 Key2020 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 172d6e3d0..098f98cd6 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,3 +3,13 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-34556 . AMS . . tooth 5662 28 NR . . . TRUE IntCal13 SwissCal 1 . . 6500 6354 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-35311 . AMS . . tooth 5641 30 NR . . . TRUE IntCal13 SwissCal 1 . . 6491 6323 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN-10297 . AMS . . tooth 4630 50 NR . . . TRUE IntCal13 SwissCal 1 . . 5578 5077 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-37619 . AMS . . tooth 4496 23 NR . . . TRUE IntCal13 SwissCal 1 . . 5290 5048 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-34903 . AMS . . tooth 4555 21 NR . . . TRUE IntCal13 SwissCal 1 . . 5317 5068 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-26902 . AMS . . tooth 3794 34 NR . . . TRUE IntCal13 SwissCal 1 . . 4300 4010 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-29808 . AMS . . tooth 2831 20 NR . . . TRUE IntCal13 SwissCal 1 . . 2994 2873 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR . AMS . . tooth 1811 24 NR . . . TRUE IntCal13 SwissCal 1 . . 1810 1620 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS-23981 . AMS . . tooth 1755 29 NR . . . TRUE IntCal13 SwissCal 1 . . 1813 1618 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS-23339 . AMS . . tooth 1811 24 NR . . . TRUE NR NR DNE . . 1813 1618 NA cal BP . FALSE DNE . NA . . . From f61feafea6eab41dd0daf76486a6f187f2cb197a Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 10:34:46 +0100 Subject: [PATCH 15/67] Apply suggestions from code review --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 0ff77e562..fb2db67f4 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,5 +1,7 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA + +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA + From d171867bd85c3e4e79f982a30c20a8203e1d1408 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Zo=C3=A9=20Pochon?= <78050804+ZoePochon@users.noreply.github.com> Date: Fri, 7 Feb 2025 11:08:49 +0100 Subject: [PATCH 16/67] Update singlegenome_species.json In order to add RodriguezVarela2024 --- assets/enums/singlegenome_species.json | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/assets/enums/singlegenome_species.json b/assets/enums/singlegenome_species.json index 419532175..27d6152cb 100644 --- a/assets/enums/singlegenome_species.json +++ b/assets/enums/singlegenome_species.json @@ -53,6 +53,9 @@ "Mushuvirus mushu", "Streptococcus mutans", "Equid herpesvirus 4", - "Gallid alphaherpesvirus 2" + "Gallid alphaherpesvirus 2", + "Streptococcus pneumoniae", + "Yersinia enterocolitica", + "Erysipelothrix rhusiopathiae" ] } From 2b0c45f3bb31febc4f8985acafda023fd5302908 Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 11:45:36 +0100 Subject: [PATCH 17/67] Update ancientsinglegenome-hostassociated_dates.tsv Corrected entries for deBarrosDamgaard2018 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index e9706a626..8f5f61be5 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,5 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE . FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA-31214 . AMS . . 1783 29 -16.3 . . . NA DNE DNE DNE . . 261 214 NA cal AD/BC . FALSE DNE . NA . . . -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE . DNE DNE DNE DNE DNE DNE . DNE . . DNE NA NA NA . . . TRUE IntCal13 SwissCal 1 . . NA NA NA DNE . FALSE DNE . NA . . . +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE . FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE DNE DNE DNE NR 10.1017/S0033822200013904 261 214 NA cal AD/BC 1 FALSE FALSE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE . DNE DNE DNE DNE DNE DNE NA DNE DNE DNE DNE NA NA NA NA NA NA TRUE IntCal13 Calib DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From 32293e8b69f8b5a27556aeb3d84c97c57d3d1554 Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 11:46:56 +0100 Subject: [PATCH 18/67] Update ancientsinglegenome-hostassociated_dates.tsv Corrected entries for deBarrosDamgaard20218 (2) --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 8f5f61be5..6c5044481 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,5 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE . FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE DNE DNE DNE NR 10.1017/S0033822200013904 261 214 NA cal AD/BC 1 FALSE FALSE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE . DNE DNE DNE DNE DNE DNE NA DNE DNE DNE DNE NA NA NA NA NA NA TRUE IntCal13 Calib DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE DNE DNE DNE NR 10.1017/S0033822200013904 261 214 NA cal AD/BC 1 FALSE FALSE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE DNE NA NA NA NA NA NA TRUE IntCal13 Calib DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From 5d65d8f4b77e3a92a92fc130164c8c77b5faa225 Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 11:50:47 +0100 Subject: [PATCH 19/67] Update CHANGELOG.md C14 deBarrosDamgaard2018 --- CHANGELOG.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0ed3be34f..91811ff5c 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -13,6 +13,8 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Single Genome: Host Associated +C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) + #### Ancient Metagenome: Environmental ### Changed From 8e3cf391d82b938e0420179b5f59bb17c4dbf3aa Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 12:51:35 +0100 Subject: [PATCH 20/67] Finished C14 dates for Key2020 --- ...cientsinglegenome-hostassociated_dates.tsv | 20 +++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 098f98cd6..cac65cd06 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,13 +3,13 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-34556 . AMS . . tooth 5662 28 NR . . . TRUE IntCal13 SwissCal 1 . . 6500 6354 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-35311 . AMS . . tooth 5641 30 NR . . . TRUE IntCal13 SwissCal 1 . . 6491 6323 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN-10297 . AMS . . tooth 4630 50 NR . . . TRUE IntCal13 SwissCal 1 . . 5578 5077 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-37619 . AMS . . tooth 4496 23 NR . . . TRUE IntCal13 SwissCal 1 . . 5290 5048 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-34903 . AMS . . tooth 4555 21 NR . . . TRUE IntCal13 SwissCal 1 . . 5317 5068 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-26902 . AMS . . tooth 3794 34 NR . . . TRUE IntCal13 SwissCal 1 . . 4300 4010 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE . FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS-29808 . AMS . . tooth 2831 20 NR . . . TRUE IntCal13 SwissCal 1 . . 2994 2873 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR . AMS . . tooth 1811 24 NR . . . TRUE IntCal13 SwissCal 1 . . 1810 1620 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS-23981 . AMS . . tooth 1755 29 NR . . . TRUE IntCal13 SwissCal 1 . . 1813 1618 NA cal BP . FALSE DNE . NA . . . -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE . TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS-23339 . AMS . . tooth 1811 24 NR . . . TRUE NR NR DNE . . 1813 1618 NA cal BP . FALSE DNE . NA . . . +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 37619 AMS NR NR tooth 4496 23 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5290 5048 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34903 AMS NR NR tooth 4555 21 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5317 5068 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 26902 AMS NR NR tooth 3794 34 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 4300 4010 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 29808 AMS NR NR tooth 2831 20 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 2994 2873 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR DNE AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1810 1620 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23981 AMS NR NR tooth 1755 29 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23339 AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE NR NR DNE NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA From dfbe11fad6c00b65c041c02246600747cdaef044 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 12:54:49 +0100 Subject: [PATCH 21/67] Update CHANGELOG.md --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0ed3be34f..c00b043cb 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,7 +12,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Metagenome: Host Associated #### Ancient Single Genome: Host Associated - +C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) #### Ancient Metagenome: Environmental ### Changed From fbdbf833a252fff70a7f23c88360808c3173cf44 Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:00:36 +0200 Subject: [PATCH 22/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 245546823..ad146bcec 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,6 +1,6 @@ -project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd +project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA -Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 TRUE TRUE . FALSE main text 1 10.1038/ng.2906 FALSE NA . NA . . NA NA NA -18.9 . . . TRUE NR CALIB NA . . NA NA NA NA . NA NA . NA . . . +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE FALSE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From 63572f28770eb43df9f16df2abfa837919bf89d9 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:01:29 +0100 Subject: [PATCH 23/67] fixing conflicts with master --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index cac65cd06..14d1e1484 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,8 +1,8 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 3e99737dfcd5a31fc1f60e53080b56fb396ae4f4 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:04:33 +0100 Subject: [PATCH 24/67] fixing conflicts with master --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 14d1e1484..3116319d9 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,8 +1,8 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 0609a55e1bb579e528fcd623434a196c808ebb51 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:05:06 +0100 Subject: [PATCH 25/67] conflicts --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 3116319d9..6562ae668 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,7 +1,7 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA From b3f0d3948b7408a5c0dd7f0c152baa53991f5a77 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:05:39 +0100 Subject: [PATCH 26/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 6562ae668..3116319d9 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,7 +1,7 @@ project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 5472ae1189f820e9a01ab1313546a70c4903dcad Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 13:06:12 +0100 Subject: [PATCH 27/67] fixed missing value citation_depth --- .../ancientsinglegenome-hostassociated_dates_schema.json | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json index 7c1603628..14384918c 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json @@ -147,9 +147,9 @@ "$id": "#/items/properties/reference_citation_depth", "type": "string", "title": "Reference Citation Depth?", - "pattern": "[1-3]|Unknown|NA", + "pattern": "[1-3]|Unknown|DNE", "description": "First place where the precise-radiocarbon date was recorded in the primary citation publication (i.e, the publication in ancientMetagenomeDir). 1 - main text > 2 - supplementary text > 3 - supplementary table.", - "examples": ["1", "2", "3", "Unknown", "NA"] + "examples": ["1", "2", "3", "Unknown", "DNE"] }, "primary_secondary_reference_citation_doi": { "$id": "#/items/properties/primary_secondary_reference_citation_doi", From 104ee673d62ee9437ce918ea6c94c18b3bacb0f6 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:06:52 +0100 Subject: [PATCH 28/67] Update ancientsinglegenome-hostassociated_dates.tsv From aa4dc625829dce60269fe26ed4286dcdb768eb92 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:07:30 +0100 Subject: [PATCH 29/67] Resolving conflicts --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 3116319d9..2221f22c0 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -2,7 +2,7 @@ project_name publication_year data_publication_doi sample_name archive_project a AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE DNE NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA From b76a3135d3bd4fb5e8bc92ef376dbbcc8ea5485c Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:18:49 +0200 Subject: [PATCH 30/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index ad146bcec..6ae12c88d 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -1,4 +1,4 @@ -project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd +project_name publication_year data_publication_doi sample_name archive_project archive_sample_accession date_information_present date_is_radiocarbon archaeological_historical_date multiple_dates reference_location reference_citation_depth primary_secondary_reference_citation_doi direct_dating radiocarbon_lab_code radiocarbon_lab_sample_id spectrometry_type pretreatment_reported pretreatment_type sample_material uncalibrated_date uncalibrated_uncertainty_plus_minus delta_13c carbon_perc delta_15n carbon_nitrogen_ratio calibration_reported calibration_curve calibration_software calibration_software_version calibration_software_settings calibration_software_citation_doi calibrated_range_lower calibrated_range_upper calibrated_range_median calibrated_range_suffix calibrated_range_sigma reservoir_offset_mentioned reservoir_offset_applied reservoir_offset_type reservoir_offset_reported reservoir_offset_reported_sd reservoir_aquatic_carbon_perc reservoir_aquatic_carbon_perc_sd AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS1892067 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18949 AMS NR NR tooth 3819 24 -20.5 47.5 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 4346 4098 4203 cal BP 2 TRUE FALSE NA NA NA NA NA AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA From 6cba5123ede0c564d3f6e163ba2a91d14d801065 Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:19:53 +0200 Subject: [PATCH 31/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 6ae12c88d..e184a2004 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,4 +3,4 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE NA FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 NR NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE NA NA NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE NA FALSE main text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 NR NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE NA NA NA NA NA NA -Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE FALSE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE FALSE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA From c57702676f236e1fd35ca844fdf5968b55915b9a Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:20:50 +0100 Subject: [PATCH 32/67] Fixed RC lab id --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index c035f88f8..22da14800 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -10,7 +10,7 @@ Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE DN Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34903 AMS NR NR tooth 4555 21 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5317 5068 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 26902 AMS NR NR tooth 3794 34 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 4300 4010 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 29808 AMS NR NR tooth 2831 20 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 2994 2873 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR DNE AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1810 1620 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR NA AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1810 1620 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23981 AMS NR NR tooth 1755 29 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23339 AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE NR NR DNE NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 7004e7fc3ec445aee89f79780cf9ef6271aa5ba5 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 13:26:19 +0100 Subject: [PATCH 33/67] Update ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 8147e73ec..3cbe06326 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,4 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE FALSE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA + From 8392b0f47846b8f7c59a1cf43769d90e829b104c Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:27:13 +0100 Subject: [PATCH 34/67] Update c14_calibration_software.json add SwissCal --- assets/enums/c14_calibration_software.json | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/assets/enums/c14_calibration_software.json b/assets/enums/c14_calibration_software.json index 793faaa26..e6be31f3d 100644 --- a/assets/enums/c14_calibration_software.json +++ b/assets/enums/c14_calibration_software.json @@ -3,6 +3,7 @@ "DNE", "NR", "OxCal", - "CalPal" + "CalPal", + "SwissCal" ] } From a99375f380fa73493ddfdd3be5377cc0cc387120 Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:28:57 +0200 Subject: [PATCH 35/67] Update CHANGELOG.md Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0ed3be34f..1037c3495 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,6 +12,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Metagenome: Host Associated #### Ancient Single Genome: Host Associated +- Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) #### Ancient Metagenome: Environmental From e0ec94c89a5c4418bdf0b792c124380a565f01dd Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:36:29 +0200 Subject: [PATCH 36/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 3cbe06326..063e2f4be 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,5 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA From fcf3981b7543ad58694dec15e0cd642697bf9448 Mon Sep 17 00:00:00 2001 From: biancamariabonucci <114093272+biancamariabonucci@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:52:29 +0200 Subject: [PATCH 37/67] Update ancientsinglegenome-hostassociated_dates.tsv --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 063e2f4be..f9ed2fed3 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,5 +3,4 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA NA - +Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From f24063abf82410bda7ee6eadf6af7843f37dc31d Mon Sep 17 00:00:00 2001 From: bbartholdy <47455812+bbartholdy@users.noreply.github.com> Date: Fri, 7 Feb 2025 13:55:08 +0100 Subject: [PATCH 38/67] limit workflow to run only when needed --- .github/workflows/check_dataset.yml | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/.github/workflows/check_dataset.yml b/.github/workflows/check_dataset.yml index bb47fd56a..c834fdef5 100644 --- a/.github/workflows/check_dataset.yml +++ b/.github/workflows/check_dataset.yml @@ -3,6 +3,10 @@ name: check_dataset on: pull_request: branches: [master] + paths: + - "ancientmetagenome-environmental/**" + - "ancientmetagenome-hostassociated/**" + - "ancientsinglegenome-hostassociated/**" jobs: amdirt: From d7fbe496f19c9f040a3e8996a905dc6ef7d2777a Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:03:05 +0100 Subject: [PATCH 39/67] Update c14_calibrated_range_suffix.json added cal BC/AD and cal BCE/CE --- assets/enums/c14_calibrated_range_suffix.json | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/assets/enums/c14_calibrated_range_suffix.json b/assets/enums/c14_calibrated_range_suffix.json index 343907ed3..ce854fc9e 100644 --- a/assets/enums/c14_calibrated_range_suffix.json +++ b/assets/enums/c14_calibrated_range_suffix.json @@ -5,6 +5,8 @@ "cal BC", "cal CE", "cal BCE", - "cal BP" + "cal BP", + "cal BC/AD", + "cal BCE/CE" ] -} \ No newline at end of file +} From cd07362ed2a8213138f8a31f601b50c0d008ab34 Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:04:15 +0100 Subject: [PATCH 40/67] Update c14_calibration_software.json added Calib (10.1017/S0033822200013904) --- assets/enums/c14_calibration_software.json | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/assets/enums/c14_calibration_software.json b/assets/enums/c14_calibration_software.json index e6be31f3d..2214f32f0 100644 --- a/assets/enums/c14_calibration_software.json +++ b/assets/enums/c14_calibration_software.json @@ -4,6 +4,7 @@ "NR", "OxCal", "CalPal", - "SwissCal" + "SwissCal", + "Calib" ] } From b367ab577fd5a4f92945e3bfbcfcec5865db8853 Mon Sep 17 00:00:00 2001 From: npsonis Date: Fri, 7 Feb 2025 15:22:54 +0200 Subject: [PATCH 41/67] Added Hammerle2024 --- .../samples/ancientsinglegenome-hostassociated_samples.tsv | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv index 2d68ef353..b6cd0d30b 100644 --- a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv +++ b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv @@ -734,3 +734,9 @@ Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Ga Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995 Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996 Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997 +Hammerle2024 2024 10.1038/s41598-024-80780-w Angola -12 18 Angola ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101083 +Hammerle2024 2024 10.1038/s41598-024-80780-w W-Cameroon (Sanaga) 4.51 11.43 Cameroon ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101086 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100927 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100929 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100926 +Hammerle2024 2024 10.1038/s41598-024-80780-w South Cameroon 4 12 Cameroon 96550 Gorilla 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101005 From 964c825db7d55dab762ccf3a89e9135319fa720f Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:25:19 +0100 Subject: [PATCH 42/67] Update ancientsinglegenome-hostassociated_dates.tsv corrected deBarrosDamgaard2018 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 780c5d57c..ad97d2776 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,5 +3,5 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE DNE DNE DNE NR 10.1017/S0033822200013904 261 214 NA cal AD/BC 1 FALSE FALSE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE DNE NA NA NA NA NA NA TRUE IntCal13 Calib DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE IntCal13 Calib DNE NR 10.1017/S0033822200013904 261 214 NA cal AD 1 FALSE FALSE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From 13381c6f0bd8f2bf6d0fee060739597ef01e0ebd Mon Sep 17 00:00:00 2001 From: npsonis Date: Fri, 7 Feb 2025 15:25:52 +0200 Subject: [PATCH 43/67] Added Hammerle2024 --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0ed3be34f..8c4798ad5 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,6 +12,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Metagenome: Host Associated #### Ancient Single Genome: Host Associated +- Hammerle2024 10.1038/s41598-024-80780-w #### Ancient Metagenome: Environmental From fef8285d3f9b46db7c330351a716e99b91041159 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:28:28 +0100 Subject: [PATCH 44/67] Update CHANGELOG.md MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Aida Andrades Valtueña --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index c00b043cb..3cf9b1587 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,7 +12,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Metagenome: Host Associated #### Ancient Single Genome: Host Associated -C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) +- C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) #### Ancient Metagenome: Environmental ### Changed From 4956a2cc8e312976f07ed0951ea61b1e7726bd46 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:29:03 +0100 Subject: [PATCH 45/67] Update ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Aida Andrades Valtueña --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 22da14800..22d857871 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -3,7 +3,8 @@ AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 PRJEB19335 ERS18 AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post PRJEB19335 ERS1892066 TRUE TRUE DNE FALSE main text 2 10.1371/journal.pone.0139705 TRUE MAMS 18955 AMS NR NR tooth 3574 19 -20.7 49 -99999 3.3 TRUE IntCal13 OxCal v4.2.24 default 10.1017/S0033822200033865 3957 3832 3873 cal BP 2 TRUE FALSE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29430 AMS NR NR tooth 3517 27 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3868 3704 3789 cal BP 2 FALSE DNE DNE NA NA NA NA Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA + Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 37619 AMS NR NR tooth 4496 23 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5290 5048 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 9e808456444f182eb3ee4b1df4de647ed3b82873 Mon Sep 17 00:00:00 2001 From: iseultj <57678236+iseultj@users.noreply.github.com> Date: Fri, 7 Feb 2025 14:32:03 +0100 Subject: [PATCH 46/67] Changed to supplement and removed extra ETR001 entry --- .../ancientsinglegenome-hostassociated_dates.tsv | 13 ++++++------- 1 file changed, 6 insertions(+), 7 deletions(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 22d857871..bb76e649e 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -5,13 +5,12 @@ Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE D Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 MUR009 PRJEB35216 ERS3967963 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34556 AMS NR NR tooth 5662 28 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6500 6354 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 37619 AMS NR NR tooth 4496 23 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5290 5048 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34903 AMS NR NR tooth 4555 21 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5317 5068 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 26902 AMS NR NR tooth 3794 34 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 4300 4010 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE DNE FALSE main text 1 10.1038/s41559-020-1106-9 TRUE MAMS 29808 AMS NR NR tooth 2831 20 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 2994 2873 NA cal BP 2 FALSE DNE DNE NA NA NA NA -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE main text 1 10.1038/s41559-020-1106-9 TRUE NR NA AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1810 1620 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 PRJEB35216 ERS3967964 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 35311 AMS NR NR tooth 5641 30 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 6491 6323 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 PRJEB35216 ERS3967967 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE GIN 10297 AMS NR NR tooth 4630 50 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5578 5077 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 PRJEB35216 ERS3967961 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 37619 AMS NR NR tooth 4496 23 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5290 5048 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 PRJEB35216 ERS3967965 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 34903 AMS NR NR tooth 4555 21 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 5317 5068 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 PRJEB35216 ERS3967966 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 26902 AMS NR NR tooth 3794 34 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 4300 4010 NA cal BP 2 FALSE DNE DNE NA NA NA NA +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 29808 AMS NR NR tooth 2831 20 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 2994 2873 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23981 AMS NR NR tooth 1755 29 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23339 AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE NR NR DNE NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA From 7012d58da9e7f024ce130eb9a8baf64f05ca114c Mon Sep 17 00:00:00 2001 From: Bhavna Ahlawat <162094631+Bhavnaahlawat@users.noreply.github.com> Date: Fri, 7 Feb 2025 19:19:21 +0530 Subject: [PATCH 47/67] Hammerle2024 --- .../samples/ancientsinglegenome-hostassociated_samples.tsv | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv index b6cd0d30b..c515491b7 100644 --- a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv +++ b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv @@ -740,3 +740,9 @@ Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherla Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100929 Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100926 Hammerle2024 2024 10.1038/s41598-024-80780-w South Cameroon 4 12 Cameroon 96550 Gorilla 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101005 +Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100926 +Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100927 +Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100929 +Hammerle2024 2024 10.1038/s41598-024-80780-w Senckenberg Forschungsinstitut und Naturmuseum Frankfurt 50.117 8.652 Germany 96,550 Gorilla gorilla 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101005 +Hammerle2024 2024 10.1038/s41598-024-80780-w Museum für Naturkunde Berlin 52.53 13.379 Germany ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101083 +Hammerle2024 2024 10.1038/s41598-024-80780-w Museum für Naturkunde Berlin 52.53 13.379 Germany ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101086 From c97b3d617defa72a9fa3fcabc714f097cad17ce5 Mon Sep 17 00:00:00 2001 From: Bhavna Ahlawat <162094631+Bhavnaahlawat@users.noreply.github.com> Date: Fri, 7 Feb 2025 19:25:11 +0530 Subject: [PATCH 48/67] Hammerle2024 --- .../samples/ancientsinglegenome-hostassociated_samples.tsv | 6 ------ 1 file changed, 6 deletions(-) diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv index c515491b7..f96b68aee 100644 --- a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv +++ b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv @@ -734,12 +734,6 @@ Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Ga Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995 Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996 Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997 -Hammerle2024 2024 10.1038/s41598-024-80780-w Angola -12 18 Angola ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101083 -Hammerle2024 2024 10.1038/s41598-024-80780-w W-Cameroon (Sanaga) 4.51 11.43 Cameroon ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101086 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100927 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100929 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100926 -Hammerle2024 2024 10.1038/s41598-024-80780-w South Cameroon 4 12 Cameroon 96550 Gorilla 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101005 Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100926 Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100927 Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100929 From 874f8be5bb6cd3b020e5f68d2f11ac03756cc2fb Mon Sep 17 00:00:00 2001 From: marcel-keller <61977721+marcel-keller@users.noreply.github.com> Date: Fri, 7 Feb 2025 15:19:44 +0100 Subject: [PATCH 49/67] Update ancientsinglegenome-hostassociated_dates.tsv added archaeological date for DA147 --- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 1fb195cfc..37f87fc9c 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -5,5 +5,5 @@ Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 PRJEB24296 ERS2106903 TRUE TRUE D Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 PRJEB24296 ERS2106904 TRUE TRUE DNE FALSE supplement text 1 10.1038/s41467-018-04550-9 TRUE MAMS 29431 AMS NR NR tooth 3499 25 -99999 -99999 -99999 -99999 TRUE NR NR NR NR NR 3842 3696 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA Warinner2014 2014 10.1038/ng.2906 G12 PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE IntCal13 Calib DNE NR 10.1017/S0033822200013904 261 214 NA cal AD 1 FALSE FALSE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE DNE DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050BP DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From 108db1ef487270b1d9071dc17701284b7fadf230 Mon Sep 17 00:00:00 2001 From: Nihan D Dagtas <34144171+nihandilsad@users.noreply.github.com> Date: Fri, 7 Feb 2025 17:28:13 +0300 Subject: [PATCH 50/67] Added UCIAMS --- assets/enums/c14_lab_code.json | 1 + 1 file changed, 1 insertion(+) diff --git a/assets/enums/c14_lab_code.json b/assets/enums/c14_lab_code.json index 5919ff601..d2216ff16 100644 --- a/assets/enums/c14_lab_code.json +++ b/assets/enums/c14_lab_code.json @@ -277,6 +277,7 @@ "UBAR", "UCD", "UCI", + "UCIAMS", "UCLA", "UCR", "UD", From fc195400d7d656cd5f713f7e45fba8790f2597b4 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 15:30:24 +0100 Subject: [PATCH 51/67] Apply suggestions from code review --- CHANGELOG.md | 2 +- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 3 ++- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 33cfbcc2d..3945c7fd7 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -16,7 +16,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). - Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) - C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) -C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) +- C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) #### Ancient Metagenome: Environmental diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 2d22d54fa..8f023ff63 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -14,4 +14,5 @@ Key2020 2020 10.1038/s41559-020-1106-9 MK3001 PRJEB35216 ERS3967962 TRUE TRUE DN Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23981 AMS NR NR tooth 1755 29 -99999 -99999 -99999 -99999 TRUE IntCal13 SwissCal 1 NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23339 AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE NR NR DNE NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE IntCal13 Calib DNE NR 10.1017/S0033822200013904 261 214 NA cal AD 1 FALSE FALSE DNE NA NA NA NA -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050BP DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050 DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA + From b38094ed137e0050784ac689b86a1c317a728bf6 Mon Sep 17 00:00:00 2001 From: npsonis Date: Fri, 7 Feb 2025 16:42:32 +0200 Subject: [PATCH 52/67] Added Hammerle2024 --- .../ancientsinglegenome-hostassociated_libraries.tsv | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv index f9431421c..9ccd9cd95 100644 --- a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv +++ b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv @@ -3159,3 +3159,9 @@ Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL15 Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL1584ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 23678785 ERR11752806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/006/ERR11752806/ERR11752806.fastq.gz 048c5746773f3c55c700d50f2e3dbb18 1664874891 Fiddaman2023 2023 10.1126/science.adg2238 OL1585 SRA PRJEB64489 ERS16164997 OL1585 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 20374738 ERR11752797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/097/ERR11752797/ERR11752797.fastq.gz f984b19b9778e16891f45ab5bc7394e4 584538336 Fiddaman2023 2023 10.1126/science.adg2238 OL1585 SRA PRJEB64489 ERS16164997 OL1585 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 2994421 ERR11752832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/032/ERR11752832/ERR11752832.fastq.gz 05838e7aa914b34d6e43e0585467c2fc 109193304 +Hammerle2024 2024 10.1038/s41598-024-80780-w ZMB_Mam_11638 SRA PRJEB75038 ERS19101083 L3859A1 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 968519 ERR13159431 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/031/ERR13159431/ERR13159431.fastq.gz b4008ada844b1ff9348f22f92659f66d 46912585 +Hammerle2024 2024 10.1038/s41598-024-80780-w ZMB_Mam_83617 SRA PRJEB75038 ERS19101086 L3863A1 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 1842081 ERR13159425 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/025/ERR13159425/ERR13159425.fastq.gz 8dda8e9a314448f1c9dfb49859d644c7 84502908 +Hammerle2024 2024 10.1038/s41598-024-80780-w ZFMK_MAM1965-0545 SRA PRJEB75038 ERS19100927 L1947 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 545139 ERR13159556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/056/ERR13159556/ERR13159556.fastq.gz 8b097d709e432373abe9aa05784199e8 24100683 +Hammerle2024 2024 10.1038/s41598-024-80780-w ZFMK_MAM1965-0546 SRA PRJEB75038 ERS19100929 L1949 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 203313 ERR13159553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/053/ERR13159553/ERR13159553.fastq.gz 4998316d8c6dcad7e150777529b284d1 7769136 +Hammerle2024 2024 10.1038/s41598-024-80780-w ZFMK_MAM1965-0547 SRA PRJEB75038 ERS19100926 L1946 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 478459 ERR13159557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/057/ERR13159557/ERR13159557.fastq.gz f24d7ebd912bbcaa71a3881d2edb6192 21727165 +Hammerle2024 2024 10.1038/s41598-024-80780-w 96550 SRA PRJEB75038 ERS19101005 L3064 single AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 3555147 ERR13159297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR131/097/ERR13159297/ERR13159297.fastq.gz 550224ee85c2f86ac1b02b8bae19afec 167928828 From c2c5cb5ca2eef0195f42c357463ba212e5490c22 Mon Sep 17 00:00:00 2001 From: Bhavna Ahlawat <162094631+Bhavnaahlawat@users.noreply.github.com> Date: Fri, 7 Feb 2025 20:20:02 +0530 Subject: [PATCH 53/67] Hammerle2024 --- .../ancientsinglegenome-hostassociated_samples.tsv | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv index f96b68aee..3863623ac 100644 --- a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv +++ b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv @@ -734,9 +734,9 @@ Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Ga Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995 Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996 Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997 -Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100926 -Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100927 -Hammerle2024 2024 10.1038/s41598-024-80780-w Museum Koenig Bonn 52.53 13.379 Germany ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus monkeypox virus Tooth chromosome SRA raw PRJEB75038 ERS19100929 -Hammerle2024 2024 10.1038/s41598-024-80780-w Senckenberg Forschungsinstitut und Naturmuseum Frankfurt 50.117 8.652 Germany 96,550 Gorilla gorilla 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101005 -Hammerle2024 2024 10.1038/s41598-024-80780-w Museum für Naturkunde Berlin 52.53 13.379 Germany ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101083 -Hammerle2024 2024 10.1038/s41598-024-80780-w Museum für Naturkunde Berlin 52.53 13.379 Germany ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus hepatitis B virus Tooth chromosome SRA raw PRJEB75038 ERS19101086 +Hammerle2024 2024 10.1038/s41598-024-80780-w Angola -12 18 Angola ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101083 +Hammerle2024 2024 10.1038/s41598-024-80780-w W-Cameroon (Sanaga) 4.51 11.43 Cameroon ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101086 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100927 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100929 +Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100926 +Hammerle2024 2024 10.1038/s41598-024-80780-w South Cameroon 4 12 Cameroon 96550 Gorilla gorilla 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101005 From cd68b06455630c33b69099fbdb8156f079ac8b93 Mon Sep 17 00:00:00 2001 From: npsonis Date: Fri, 7 Feb 2025 17:08:52 +0200 Subject: [PATCH 54/67] Add Monkeypox virus --- assets/enums/singlegenome_species.json | 1 + 1 file changed, 1 insertion(+) diff --git a/assets/enums/singlegenome_species.json b/assets/enums/singlegenome_species.json index 27d6152cb..edb399dfe 100644 --- a/assets/enums/singlegenome_species.json +++ b/assets/enums/singlegenome_species.json @@ -57,5 +57,6 @@ "Streptococcus pneumoniae", "Yersinia enterocolitica", "Erysipelothrix rhusiopathiae" + "Monkeypox virus" ] } From 796ca52160ce969756c301f1bfeb77a3e1fb2d76 Mon Sep 17 00:00:00 2001 From: Bhavna Ahlawat <162094631+Bhavnaahlawat@users.noreply.github.com> Date: Fri, 7 Feb 2025 20:40:50 +0530 Subject: [PATCH 55/67] Hammerle2024_sample_host added Gorilla gorilla and Pongo abelii --- assets/enums/sample_host.json | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/assets/enums/sample_host.json b/assets/enums/sample_host.json index 0bf487726..13c63d6d3 100644 --- a/assets/enums/sample_host.json +++ b/assets/enums/sample_host.json @@ -36,6 +36,8 @@ "Lithobates pipiens", "Equus caballus", "Sciurus vulgaris", - "Gallus gallus" + "Gallus gallus", + "Gorilla gorilla", + "Pongo abelii" ] } From b9744731e3b132ab8426abdd5e20e6c54529dbf8 Mon Sep 17 00:00:00 2001 From: Nihan D Dagtas <34144171+nihandilsad@users.noreply.github.com> Date: Fri, 7 Feb 2025 18:15:51 +0300 Subject: [PATCH 56/67] C14 Austin2022 (#1386) * Add Austin2022 C14 * Update CHANGELOG.md --------- Co-authored-by: KaHea-21 --- CHANGELOG.md | 3 ++- .../dates/ancientsinglegenome-hostassociated_dates.tsv | 1 + 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 3945c7fd7..88269d24a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -13,11 +13,12 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Single Genome: Host Associated +- C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad) - Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) - C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) - - C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) + #### Ancient Metagenome: Environmental ### Changed diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 8f023ff63..142febaba 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -15,4 +15,5 @@ Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DN Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DNE TRUE supplement text 1 10.1038/s41559-020-1106-9 TRUE MAMS 23339 AMS NR NR tooth 1811 24 -99999 -99999 -99999 -99999 TRUE NR NR DNE NR NR 1813 1618 NA cal BP 2 FALSE DNE DNE NA NA NA NA deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE IntCal13 Calib DNE NR 10.1017/S0033822200013904 261 214 NA cal AD 1 FALSE FALSE DNE NA NA NA NA deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050 DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +Austin2022 2022 10.1038/s42003-022-03890-z St.LI PRJNA851947 SRS13524932 TRUE FALSE 20 FALSE main text DNE DNE FALSE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA From b20f4258de4e9f4f61472f909002617a5569e6f9 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 16:27:14 +0100 Subject: [PATCH 57/67] C14- Added Susat2021 (#1334) * Added Susat2021 * Added changelog * removed additional column * sigma modified to fullfill schema * change sigma to number * Update ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv --------- Co-authored-by: KaHea-21 --- CHANGELOG.md | 1 + .../dates/ancientsinglegenome-hostassociated_dates.tsv | 1 + .../dates/ancientsinglegenome-hostassociated_dates_schema.json | 2 +- 3 files changed, 3 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 88269d24a..79b0ba0cb 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -12,6 +12,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Metagenome: Host Associated #### Ancient Single Genome: Host Associated +- Susat 2021 10.1016/j.celrep.2021.109278 (C14 added by @aidaanva) - C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad) - Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 142febaba..9091f8200 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -16,4 +16,5 @@ Key2020 2020 10.1038/s41559-020-1106-9 ETR001 PRJEB35216 ERS3967960 TRUE TRUE DN deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 TRUE TRUE DNE FALSE supplement table 1 10.1038/s41586-018-0094-2 TRUE UBA 31214 AMS TRUE Collagen (ultrafiltered) unknown 1783 29 -16.3 -99999 12.6 3.15 TRUE IntCal13 Calib DNE NR 10.1017/S0033822200013904 261 214 NA cal AD 1 FALSE FALSE DNE NA NA NA NA deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050 DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA Austin2022 2022 10.1038/s42003-022-03890-z St.LI PRJNA851947 SRS13524932 TRUE FALSE 20 FALSE main text DNE DNE FALSE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 PRJEB42185 ERS6638365 TRUE TRUE DNE FALSE main text 3 https://fu-berlin.primo.exlibrisgroup.com/permalink/49KOBV_FUB/1v1tp5h/alma9958233188402883 TRUE KIA 46462 AMS NR NR tooth 5049 33 -25.22 -99999 13.65 3.2 TRUE IntCal13 OxCal 4 NR 10.1111/j.1475-4754.2008.00457.x 5300 5050 NA cal BP 2 TRUE TRUE FRESHWATER 700 50 53 7 diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json index 14384918c..eccb1ecff 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates_schema.json @@ -333,7 +333,7 @@ }, "calibrated_range_sigma": { "$id": "#/items/properties/calibrated_range_sigma", - "type": [ "integer", "null" ], + "type": [ "number", "null" ], "title": "Calibrated range sigma", "description": "Confidence level of the reported calibrated age range, typically in 2 (95.4%) or 1 (68.2%) levels of significance (sigma).", "examples": [1, 2, -99999, "NA"] From 6715ba4466e01f34defe32c7641b7a013a3aa3b4 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 16:33:31 +0100 Subject: [PATCH 58/67] Delete CHANGELOG.md --- CHANGELOG.md | 618 --------------------------------------------------- 1 file changed, 618 deletions(-) delete mode 100644 CHANGELOG.md diff --git a/CHANGELOG.md b/CHANGELOG.md deleted file mode 100644 index 8c4798ad5..000000000 --- a/CHANGELOG.md +++ /dev/null @@ -1,618 +0,0 @@ -# Changelog - -All notable changes to this project will be documented in this file. - -The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), -and this project follows to [Calendar Versioning](https://calver.org/). - -## v25.03: Historic Centre of Cordoba [Unreleased] - -### Added - -#### Ancient Metagenome: Host Associated - -#### Ancient Single Genome: Host Associated -- Hammerle2024 10.1038/s41598-024-80780-w - -#### Ancient Metagenome: Environmental - -### Changed - -### Removed - -## v24.12: Old Town of Corfu - -### Added - -#### Ancient Metagenome: Host Associated - -#### Ancient Single Genome: Host Associated - -- Fiddaman 2023 10.1126/science.adg2238 (added by @aidaanva) -- Susat 2024 10.1038/s42003-024-06676-7 (added by @MagdalenaHC) - -#### Ancient Metagenome: Environmental - -### Changed - -- Bonczarowska2023: Fixed library type (actually half-UDG, despite paper reporting non-UDG) 10.1098/rspb.2023.0622 (fixed by @marcel-keller) - -### Removed - -## v24.09: Medieval Town of Toruń - -### Added - -#### Ancient Metagenome: Host Associated - -- Austin 2024 10.1038/s41598-024-64818-7 (added by @alexhbnr and @jfy133) -- Bozzi 2024 10.1038/s41598-023-40246-x (added by @DavideBozzi and @alexhbnr) - -#### Ancient Single Genome: Host Associated - -- White 2021 10.3390/biology10121324 (added by @DianaSpurite, @jfy133, and @alexhbnr) - -#### Ancient Metagenome: Environmental - -- Zampirolo 2024 10.1016/j.cub.2024.08.047 (added by @GiuliaZ538) - -### Changed - -- Fix archive sample accession codes for Liu 2024 10.1126/sciadv.adn8490 (@alexhbnr) -- Update the data_publication_doi of Lebrasseur 2024 10.1093/ve/vead087 (@alexhbnr) - -### Removed - -## v24.06: Su Nuraxi di Barumini - -### Added - -#### Ancient Metagenome: Host Associated - -- Wright 2024 10.1016/j.jasrep.2024.104510 (added by @biancamariabonucci) - -#### Ancient Single Genome: Host Associated - -- Sun 2024 10.1038/s41467-024-47358-6 (added by @aidaanva) -- Urban 2024 10.1016/j.cub.2024.04.006 (added by @aidaanva) -- Lebrasseur 2024 10.1093/ve/vead087 (added by @YuejiaoHuang) - -#### Ancient Metagenome: Environmental - -- Liu 2024 10.1126/sciadv.adn8490 (added by @rozwalak) - -### Changed - -### Removed - -## v24.03: Monticello - -### Added - -#### Ancient Metagenome: Host Associated - -- Nishimura 2024 10.1371/journal.pone.0295924 (added by @alexhbnr) -- Kirdok 2023 10.1038/s41598-023-48762-6 (added by @annaewhite) -- Fiorin 2024 10.1038/s41598-024-52422-8 (added by @jfy133) -- Jackson 2024 10.1093/molbev/msae017(added by @iseultj) - -#### Ancient Single Genome: Host Associated - -- Majander 2024 10.1038/s41586-023-06965-x (added by @ilight1542) -- Rozwalak 2024 10.1038/s41467-023-44370-0 (added by @rozwalak) -- Jackson 2024 10.1093/molbev/msae017(added by @iseultj) - -#### Ancient Metagenome: Environmental - -- Buchwald 2024 10.1093/ismejo/wrad006 (added by @darcy220606) -- Murchie 2023 10.1038/s41467-021-27439-6 (added by @ktozdogan) - -### Changed - -### Removed - -## v23.12: Cathedral, Alcázar and Archivo de Indias - -### Added - -#### Ancient Metagenome: Host Associated - -- Madison 2023 10.1371/journal.pone.0291540 (added by @DianaSpurite) - -#### Ancient Single Genome: Host Associated - -- Hodgkins 2023 10.1007/s13313-023-00936-6 (added by @DianaSpurite and @iseultj) - -#### Ancient Metagenome: Environmental - -- Pérez 2023 10.1111/fwb.14182 (added by @ktozdogan) - -### Changed - -- Fix coordinate of sample SK8 in Schuenemann 2013 10.1126/science.1238286 (@DianaSpurite and @marcel-keller) - -### Removed - -## v23.09: Historic Centre of Cienfuegos - -### Added - -#### Ancient Metagenome: Host Associated - -- Fontani 2023 10.1038/s41598-023-39250-y (added by @darcy220606) - -#### Ancient Single Genome: Host Associated - -- Neumann 2023 10.1553/archaeologia107 (added by @DianaSpurite) -- Bonczarowska 2023 10.1098/rspb.2023.0622 (added by @DianaSpurite) -- Long 2023 10.1371/journal.ppat.1011538 (added by @DianaSpurite) -- Campos 2023 10.1038/s41467-023-39950-z (added by @DianaSpurite) -- Parker2023 10.1371/journal.ppat.1011404 (added by @DianaSpurite) -- Clavel 2023 10.1016/j.isci.2023.106787 (added by @DianaSpurite/@theHatIsBack) - -#### Ancient Metagenome: Environmental - -### Changed - -### Removed - -## v23.06: Aachen Cathedral - -### Added - -#### Ancient Metagenome: Host Associated - -- Kimsis 2023 10.1111/1758-2229.13157 (added by @maxibor) -- Honap 2023 10.1002/ajpa.24735 (added by @schummax/ @tomrichtermeier/ @Frederik-Lutz) -- Klapper 2023 10.1126/science.adf5300 (added by @alexhbnr) - -#### Ancient Single Genome: Host Associated - -- Swali 2023 10.1038/s41467-023-38393-w (added by @DianaSpurite) -- Clavel 2023 10.1016/j.isci.2023.106787 (added by @DianaSpurite) -- Neumann 2023 10.1553/archaeologia107 (added by @DianaSpurite) - -#### Ancient Metagenome: Environmental - -- Rigou 2022 10.1093/femsml/uqac003 (added by @schummax, @tomrichtermeier, @Frederik-Lutz, and @alexhbnr) -- Armbrecht 2021, 10.1038/s43705-021-00070-8 (added by @ktozdogan) -- Vassallo 2023 10.1128/spectrum.04374-22 (added by @jfy133) -- Klapper 2023 10.1126/science.adf5300 (added by @alexhbnr) -- Zimmermann 2023 10.1038/s41467-023-36845-x (added by @ktozdogan) - -### Changed - -- Refined geographic coordinates of SeguinOrlando2021 based same site in Clavel 2023 - -### Removed - -## v23.03.0: Rocky Necropolis of Pantalica - -### Added - -#### Ancient Metagenome: Host Associated - -- Moraitou 2022 10.1093/molbev/msac263 (added by @alexhbnr) -- Quagliariello 2022 10.1038/s41467-022-34416-0 (added by @alexhbnr) -- Sarhan 2023 10.1186/s12915-022-01509-7 (added by @msabrysarhan) - -#### Ancient Single Genome: Host Associated - -- Braun 2020 10.3390/microorganisms8020298 (added by @jfy133) -- Quagliariello 2022 10.1038/s41467-022-34416-0 (added by @DianaSpurite) -- Bonczarowska 2022 10.1186/s13059-022-02806-8 (added by @DianaSpurite) -- Eaton 2023 10.1016/j.cub.2023.01.064 (added by @DianaSpurite) -- Rifkin 2023 10.1038/s42003-023-04582-y (added by @mibr30) -- Sarhan 2023 10.1186/s12915-022-01509-7 (added by @msabrysarhan) - -#### Ancient Metagenome: Environmental - -- Kjaer 2022 10.1038/s41586-022-05453-y (added by @ktozdogan) -- Nwosu 2023,10.1038/s42003-023-04430-z (added by @ktozdogan) - -### Changed - -- Fixed md5sum hash error of a Ozga2019 sample -- Fixed md5sum hash error of a Granehall2021 sample -- Replace URLs of Velsko2022 with the ones from the column "fastq_ftp" instead of the column "submitted_ftp" from ENA - -### Removed - -## v22.12: Joya de Cerén - -### Added - -#### Ancient Metagenome: Host Associated - -- Modi 2021 10.1016/j.quaint.2021.12.003 (added by @jfy133) -- Scorrano 2022 10.1038/s42003-022-04190-2 (added by @ktozdogan) -- Fagernäs 2022 10.1093/femsmc/xtac006 (added by @jfy133) -- Velsko 2022 10.1093/pnasnexus/pgac148 (added by @bbartholdy) - -#### Ancient Single Genome: Host Associated - -- Jäger 2022 10.1016/j.tube.2022.102181 (added by @DianaSpurite) -- Rieux 2021 10.1038/s41598-021-00518-w (added by @DianaSpurite) -- Guellil 2021 10.1038/s41598- 021- 98214-2 (added by @DianaSpurite) -- Guellil 2022 10.1186/s13059-021-02580-z (added by @DianaSpurite) -- Spyrou 2022 10.1038/s41586-022-04800-3 (added by @DianaSpurite) -- Neumann 2022 10.1016/j.cub.2022.06.094 (added by @DianaSpurite) -- Vågene 2022 10.1038/s41467-022-28562-8 (added by @DianaSpurite) -- Austin 2022 10.1038/s42003-022-03890-z (added by @DianaSpurite) -- Guellil 2022 10.1126/sciadv.abo4435 (added by @DianaSpurite) -- Long 2022 10.1038/s42003-022-03527-1 (added by @jfy133) - -#### Ancient Metagenome: Environmental - -- Armbrecht 2022 10.1038/s41467-022-33494-4 (added by @ilight1542) -- Courtin 2022 10.1002/edn3.336 (added by @ktozdogan) -- Iwańska 2022 10.1038/s41598-022-12761-w (added by @ktozdogan) -- Gelabert 2021 10.1016/j.cub.2021.06.023 (added by @ktozdogan) -- Moore 2020 10.1002/ece3.6082 (added by @ktozdogan) -- Perez 2022 10.3390/microorganisms10081623 (added by @Darcy220606) - -### Changed - -- Synchronised site location name of PattersonRoss2018 with Long2022 - -### Removed - -## v22.09.2: Pyu Ancient Cities - -Correction: Correct release ZIP upload - -## v22.09: Pyu Ancient Cities - -### Added - -- Extended repository to include library level metadata for all existing samples - -#### Ancient Metagenome: Host Associated - -- Granehäll 2021 10.1186/s40168-021-01132-8 -- Maixner 2021 10.1016/j.cub.2021.09.031 -- Kazarina 2021b 10.1016/j.jasrep.2021.103213 - -#### Ancient Single Genome: Host Associated - -- Granehäll 2021 10.1186/s40168-021-01132-8 -- Pfrengle 2021 10.1186/s12915-021-01120-2 -- Kocher 2021 10.1126/science.abi5658 -- Andrades Valtueña 2022 10.1073/pnas.2116722119 - -#### Ancient Metagenome: Environmental - -#### Ancient Metagenome: Anthropogenic - -- Due to the lack of community interest, this table has now been deprecated and will not be included in future releases of AncientMetagenomeDir. However it will be reinstated in the future if interest returns. - -### Misc - -- Added library metadata for FASTQ and BAM level data -- Changed the missing value from `NA` to `Unknown` for archive_project for the samples tsv -- Removed 'sampling date' columns from host-associated metagenome and single-genome sample tables as this is almost never reported - -### Changed - -- Changed archive_project from NA to Unknown for Taubenberger2005, PattersonRoss2018, Worobey2016 -- Fixed Susat2021 DOIs (excel dragging error) -- Fixed Kazarina2021 Project/Sample accessions (column flip error) -- Fixed Morozova2020 DOIs (excel dragging error) -- Fixed Bieker2020 DOIs (paper partly reused previous data for new purpose and earlier had the other publication DOI. Now made all DOIs and dates consistent for the publication where metagenomics was performed) -- Fixed Bieker2020 sample USNH-39 into two separate 'artifical samples' due to upload of two libraries to two difference archives. -- Fixed Bieker2020 missing sample accession codes (due to later re-sequencing and non-reused SRS/ERS code) -- Fixed Muhlemann2018 Project ID (now available) -- Fixed FellowsYates2021 corrected typo in longitude 85.53 > -85.53 -- Fixed Velsko2018 project name to Velsko2019 (wrong publication year) -- Fixed Schuenemann2011 Put the accession ID of the full plasmid sequence not partial -- Fixed Martin2013 corrected archive name (incorrectly reported in publication) -- Fixed Seersholm2016 archive ENA (from incorrectly specified as SRA) -- Fixed Eisenhofer2020 date rounding error (originally added 230 rather than 200) -- Fixed BravoLopez2020 typo in site name (Inmaculate -> Immaculate) -- Fixed Willmann2018 project_name (originally missing the second 'n') -- Fixed DeDios2020, DeDios2019, DeDios2021 project_names (originally had lowercase leading d) -- Fixed DeDios2020 sample_name from Jean-Paul Marat to Marat to make it consistent with the libraries uploaded in the ENA -- Fixed Campos2021 sample accession column had run accession -- Fixed Philips2017 fixed incorrect DOI (from later publication that reused same data) -- Fixed Wagner2014 incorrect archive in the samples tsv -- Fixed Eerkens2018 sample name from an individual name to the specific calculus sample name -- Fixed Zhou2018 by switching sample name to a clearer one based on the file name rather than just the project_archive ID -- Fixed Zhou2018 in ancientsinglegenome-hostassociated archive_project and archive_accession to be more explicit as of which files have been use to reconstruct the genome -- Fixed Campos2021 sample_name to HERB_1937 to make it consistent with the libraries uploaded in the ENA -- Fixed Borry2020 sample_name to match archaeological ID from paper (as opposed to laboratory ID which was in sample.tsv table) -- Fixed Velsko2019 accidental inclusion of old sample accessions to keep 'correct' sample accession of correct data -- Fixed Liang2021 sample names to be more specific to allow association with library names -- Fixed GuzmanSolis2021 archive_project and archive_accession to include the Dryad doi and the specific ids from the download links -- Fixed Ardelean2020 sample_name incorrect in samples tsv, replaced with sample_name from libraries tsv -- Fixed Morozova2020 typo in - Azov37 -> Axov38 -- Fixed Morozova2020 accidental ERS code duplication across two samples - -### Removed - -- Removed Mendum2014 sample SK27 due to TreeBASE repository not being accessible any more -- Removed SantiagoRodriguez2016 and SantiagoRodridguez2016 samples as raw data is no longer publicly accessible on MG-RAST -- Removed Braadbaart2020 as uploaded data was not shotgun data as required for inclusion in environmental table -- Removed Worobey2016 samples SF74 and SF73 as not in final consensus sequences -- Removed Schulte2021 sample accessions of targeted capture libraries (which were different from the shotgun libraries) -- Removed Schuenemann2018 libraries (Jørgen\_\*) that were originally published in tandem with and already included in KrauseKyora2018b - -## v21.09: Taputapuātea - -### Added - -#### Ancient Metagenome: Host Associated - -- Ottoni 2021 10.1073/pnas.2102116118 -- Rampelli 2021b 10.1016/j.isci.2021.102816 -- Brealey 2021 10.1016/j.cub.2021.08.010 - -#### Ancient Single Genome: Host Associated - -- Susat 2021 10.1016/j.celrep.2021.109278 -- De Dios 2021 10.1016/j.isci.2021.103021 -- Campos 2021 10.1371/journal.ppat.1009714 -- Guzmán-Solis 2021 10.7554/eLife.68612 -- Wu 2021 10.1371/journal.ppat.1009886 - -#### Ancient Metagenome: Environmental - -#### Ancient Metagenome: Environmental - -- Moguel 2021 10.1038/s41598-021-92981-8 - -#### Ancient Metagenome: Anthropogenic - -#### Misc - -### Changed - -- Corrected _H. pylori_ having taxonomic domain to bacteria from virus -- Ferrari2020: Corrected typo in accession ERS3935829 -- BravoLopez2020: Corrected typo in site name Inmaculate Conception > Immaculate Conception - -### Removed - -## v21.06: Côa Valley and Siega Verde - -### Added - -#### Ancient Metagenome: Host Associated - -- Wibowo 2021 10.1038/s41586-021-03532-0 -- Fellows Yates 2021 10.1073/pnas.2021655118 -- Farrer 2021 10.1038/s41598-021-86100-w - -#### Ancient Single Genome: Host Associated - -- Seguin-Orlando 2021 10.1016/j.isci.2021.102383 -- Haller 2021 10.1016/j.isci.2021.102419 -- Guellil 2020 10.1073/pnas.2009677117 -- Danneels 2021 10.1016/j.cub.2021.03.049 -- Kocher 2021 10.1126/science.abi5658 - -#### Ancient Metagenome: Environmental - -- Wibowo 2021 10.1038/s41586-021-03532-0 -- Schulte 2021 10.1111/1755-0998.13311 -- Lammers 2021 10.1038/s42003-021-01710-4 -- Liang 2021 10.1186/s40168-021-01057-2 - -#### Ancient Metagenome: Anthropogenic - -#### Misc - -### Changed - -- Changed `collection_date` column to `sampling_date` to clarify this is when drilling, or sub-sampling for DNA analysis was performed -- Corrected date for GLZ001 from Yu et al. (2020) from 4400 to 4600 based on the re-calibrated reported date in the paper (doi: 10.1016/j.cell.2020.04.037) - -### Removed - -## v21.03: Town of Provins - -### Added - -- [#348](https://github.com/SPAAM-community/AncientMetagenomeDir/pull/348): Interactive GeoJSON maps rendered with GitHub -- [#349](https://github.com/SPAAM-community/AncientMetagenomeDir/issues/349): No spaces allowed in `archive_accession` column. - -#### Ancient Metagenome: Host Associated - -- Philips 2017 10.1186/s12864-020-06810-9 -- Kazarina 2021 10.3390/genes12020309 -- Seguin-Orlando 2021 10.1016/j.cub.2020.12.015 -- Rampelli 2021 10.1038/s42003-021-01689-y -- Witt 2021 10.1038/s41598-021-82362-6 - -#### Ancient Single Genome: Host Associated - -- Philips 2020 10.1186/s12864-020-06810-9 -- Kılınç 2021 10.1126/sciadv.abc4587 - -#### Ancient Metagenome: Environmental - -- Rampelli 2021 10.1038/s42003-021-01689-y - -#### Ancient Metagenome: Anthropogenic - -#### Misc - -- Added project accession column to all tables to help finding other samples from same project - -### Changed - -- Cutibacterium acnes (DeDios2020, 10.1016/j.meegid.2020.104209) changed from eukaryota to bacteria. -- Corrected publication_doi and sample_age_doi for Jacobson2020 (10.1098/rstb.2019.0586) -- Corrected overwritten new SRA information for Weyrich 2017 (10.1038/nature21674) -- Corrected date DOI spreadsheetdragging error for Armbrecht 2020 (10.1111/1755-0998.13162) - -### Removed - -## v20.12: Ancient City of Nessebar - -### Added - -#### Ancient Metagenome: Host Associated - -- Modi 2020 10.1007/s12520-019-00983-5 -- Appelt 2014 10.1128/AEM.03242-13 -- Eisenhofer 2020 10.1098/rstb.2019.0578 -- Jacobson 2020 10.1098/rstb.2019.0589 -- Sabin 2020 10.1098/rstb.2019.0576 -- Williams 2020 10.1128/MRA.00850-20 -- Fotakis 2020 10.1098/rstb.2019.0584 - -#### Ancient Single Genome: Host Associated - -- Susat 2020 10.1038/s41598-020-71530-9 -- Eisenhofer 2020 10.1098/rstb.2019.0578 -- Morozova 2020 10.1098/rstb.2019.0569 -- Schuenemann 2018 10.1371/journal.pntd.0006447 -- Ferrari 2020 10.1098/rstb.2019.0572 -- Williams 2020 10.1128/MRA.00850-20 -- Fotakis 2020 10.1098/rstb.2019.0584 -- Marciniak 2016 10.1016/j.cub.2016.10.016 -- Gelabert 2016 10.1073/pnas.1611017113 -- Taubenberger 2005 10.1038/nature04230 -- Lugli 2017 10.1186/s40168-016-0221-y -- Bravo Lopez 2020 10.1098/rstb.2019.0580 - -#### Ancient Metagenome: Environmental - -- Added new metadata columns to improve data reconstructions: sequence_name (e.g. core, transect), depth, feature (e.g. cave, lake), study type. -- Braadbaart 2020 10.1016/j.jasrep.2020.102468 -- DerSarkissian 2016 10.1111/1755-0998.12679 - -#### Ancient Metagenome: Anthropogenic - -#### Misc - -- Added 'live-status' summary images that are displayed on README and updated on every new submission. - -### Changed - -- Ardelean 2020: Differentiated samples with identical names -- Ahmed 2018: Updated sample_age and sample_age_doi -- Graham 2016: Updated sequence_name -- Wang 2017: Updated sequence_name -- Pedersen 2016: Updated sequence_name and corrected two typos in depth -- Armbrecht 2020: fixed broken DOI due to spreadsheet drag-down error -- de Dios 2019: Standardised coordinates and location name with Gelabert 2016 for accuracy -- van Dorp 2020: Standardised coordinates and location name with Gelabert 2016 for accuracy -- Weyrich 2017: Replaced OAGR codes with newly uploaded SRA accession numbers - -## v20.09: Ancient Ksour of Ouadane - -### Added - -#### Ancient Metagenome: Host Associated - -- Warinner 2014 10.1038/ng.2906 -- Weyrich 2017 10.1038/nature21674 -- Velsko 2018 10.1186/s40168-019-0717-3 -- Jensen 2019 10.1038/s41467-019-13549-9 -- Fagernäs 2020 10.1016/j.jas.2020.105135 -- Mann 2018 10.1038/s41598-018-28091-9 -- Brealey 2020 10.1093/molbev/msaa135 -- Ozga 2019 10.1038/s41598-019-53802-1 -- Ottoni 2019 10.1038/s41598-019-56074-x -- Zhou 2018 10.1016/j.cub.2018.05.058 -- Wilman 2018 10.1371/journal.pone.0196482 -- Nieves-Colón 2020 10.1093/molbev/msz267 -- Ozga 2016 10.1002/ajpa.22960 -- Santiago-Rodriguez 2016 10.1093/femsec/fiw182 -- Santiago-Rodriguez 2017 10.3390/genes8110310 -- Maixner 2016 10.1126/science.aad2545 -- Ferrari 2018 10.3390/genes9090436 -- McDonough 2018 10.1093/jmammal/gyy080 -- Campana 2014 10.1186/1756-0500-7-111 -- Bieker 2020 10.1111/1755-0998.13174 - - In addition to new samples, includes re-utilised data from Sánchez-Barreiro 2016 10.1111/1755-0998.12610 and Exposito-Alonso 2018 10.1371/journal.pgen.1007155 -- Neukamm 2020 10.1186/s12915-020-00839-8 -- Eerkens 2018 10.1016/j.ijpp.2018.05.001 - -#### Ancient Single Genome: Host Associated - -- Warinner 2014 10.1038/ng.2906 -- Bos 2014 10.1038/nature13591 -- Schuenemann 2013 10.1126/science.1238286 -- Schuenemann 2018 10.1371/journal.ppat.1006997 -- Devault 2017 10.7554/eLife.20983 -- Mühlemann 2018 10.1038/s41586-018-0097-z -- Düx 2020 10.1126/science.aba9411 -- Andrades Valtueña 2017 10.1016/j.cub.2017.10.025 -- Rasmussen 2015 10.1016/j.cell.2015.10.009 -- Spyrou 2018 10.1038/s41467-018-04550-9 -- Rascovan 2019 10.1016/j.cell.2018.11.005 -- Yu 2020 10.1016/j.cell.2020.04.037 -- Guellil 2018 10.1073/pnas.1807266115 -- Duggan 2016 10.1016/j.cub.2016.10.061 -- de Barros Damgaard 2018 10.1038/s41586-018-0094-2 -- Key 2020 10.1038/s41559-020-1106-9 -- Barquera 2020 10.1016/j.cub.2020.04.002 -- Krause-Kyora 2018 10.7554/eLife.36666 -- Giffin 2020 10.1038/s41598-020-66012-x -- Feldman 2016 10.1093/molbev/msw170 -- Bar-Gal 2013 10.1002/hep.25852 -- Keller 2019 10.1073/pnas.1820447116 -- Mühlemann 2018b 10.1073/pnas.1804921115 -- Wagner 2014 10.1016/S1473-3099(13)70323-2 -- Bos 2011 10.1038/nature10549 -- Bos 2016 10.7554/eLife.12994.001 -- de-Dios 2020 10.1016/j.meegid.2020.104209 -- Patterson Ross 2018 10.1371/journal.ppat.1006750 -- Vågene 2018 10.1038/s41559-017-0446-6 -- Zhou 2018 10.1016/j.cub.2018.05.058 -- Sabin 2020 10.1186/s13059-020-02112-1 -- Kay 2014 10.1128/mBio.01337-14 -- Devault 2014 10.1056/NEJMoa1308663 -- Kay 2015 10.1038/ncomms7717 -- van Dorp 2020 10.1093/molbev/msz264 -- Worobey 2016 10.1038/nature19827 -- Kerudin 2019 10.1016/j.jas.2019.105035 -- Schuenemann 2011 10.1073/pnas.1105107108 -- DeDios 2019 10.1099/mgen.0.000289 -- Duggan 2020 10.1186/s13059-020-02079-z -- Namouchi 2018 10.1073/pnas.1812865115 -- Spyrou 2016 10.1016/j.chom.2016.05.012 -- Martin 2013 10.1038/ncomms3172 -- Spyrou 2019 10.1038/s41467-019-12154-0 -- Krause-Kyora 2018b 10.1038/s41467-018-03857-x -- Majander 2020 10.1016/j.cub.2020.07.058 -- Yoshida 2013 10.7554/eLife.00731 (KM117502 and KM117507 not included, no data in the ENA PRJEB1877) -- Mühlemann 2020 10.1126/science.aaw8977 -- Mendum 2014 10.1186/1471-2164-15-270 -- Neukamm 2020 10.1186/s12915-020-00839-8 -- Eerkens 2018 10.1016/j.ijpp.2018.05.001 - -#### Ancient Metagenome: Environmental - -- Ahmed 2018 10.1016/j.quascirev.2017.11.037 -- Gaffney 2020 10.3390/geosciences10070270 -- Slon 2017 10.1126/science.aam9695 -- Smith 2015 10.1126/science.1261278 -- Ardelean 2020 10.1038/s41586-020-2509-0 -- Domain 2020 10.3389/fevo.2020.00218 -- Armbrecht 2020 10.1111/1755-0998.13162 -- Pedersen 2016 10.1038/nature19085 -- Graham 2016 10.1073/pnas.1604903113 -- Wang 2017 10.1111/jbi.13010 -- Seersholm 2016 10.1038/ncomms13389 - -#### Ancient Metagenome: Anthropogenic - -### Changed - -- Fagernäs 2020: Fixed missing sample age DOI -- Ottoni 2019: Fixed duplicate SRA codes -- de-Dios 202: Added sample data -- Schuenemann 2018: dates corrected calculating based on 1950 -- Willmann2018: re-list the community_type of tooth samples as skeletal tissue -- Brealey2020: re-list the community_type of tooth samples as skeletal tissue -- Maixner2016: collapsed _H. pylori_ genome samples into one -- Bos2016: Corrected site name -- Bos2011: changed site name for sample ES_6330 (6330) to Abbey St. Mary Graces - after investigation from Monica Green -- Weyrich 2017: Added missing OAGR accession after consultation with authors -- Maixner2016: corrected singlegenome_domain - -### Removed From 3359abf03ebd9045257d04379aa20b45a9d207fa Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 16:33:47 +0100 Subject: [PATCH 59/67] Delete ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv --- ...tsinglegenome-hostassociated_libraries.tsv | 3167 ----------------- 1 file changed, 3167 deletions(-) delete mode 100644 ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv diff --git a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv deleted file mode 100644 index 9ccd9cd95..000000000 --- a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv +++ /dev/null @@ -1,3167 +0,0 @@ -project_name publication_year data_publication_doi sample_name archive archive_project archive_sample_accession library_name strand_type library_polymerase library_treatment instrument_model library_layout library_strategy read_count archive_data_accession file_type download_links download_md5s download_sizes -Marciniak2016 2016 10.1016/j.cub.2016.10.016 LV13 SRA PRJNA348634 SRS1747845 LV13 double Unknown unknown Illumina HiSeq 1500 PAIRED WGS 113 SRR4425648 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/008/SRR4425648/SRR4425648.fastq.gz 60b42bfe436672831f295285e2e0ad35 2892 -Marciniak2016 2016 10.1016/j.cub.2016.10.016 LG20 SRA PRJNA348634 SRS1747846 LG20 double Unknown unknown Illumina HiSeq 1500 PAIRED WGS 7 SRR4425649 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/009/SRR4425649/SRR4425649.fastq.gz b3c895a83afa122e65345a87850e27e5 339 -Bos2014 2014 10.1038/nature13591 64 SRA PRJNA244165 SRS592075 sample_64 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 50916301 SRR1238559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_2.fastq.gz f62e1e3dd90fb7fd0324e920f15ab8bd;b635c5da56ca1b3dd185678c9f9df508 3713855268;3742735134 -Bos2014 2014 10.1038/nature13591 58 SRA PRJNA244165 SRS591992 sample_58 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 20046901 SRR1238557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/007/SRR1238557/SRR1238557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/007/SRR1238557/SRR1238557_2.fastq.gz 8d64819a3e12ff309783c802087d73a4;8b15368ff36e993c12dd8b44f4a7b8d0 1510008541;1515109783 -Bos2014 2014 10.1038/nature13591 54 SRA PRJNA244165 SRS591994 sample_54 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 80406577 SRR1238558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_2.fastq.gz 72ade0f81eed372eae9fb927a484aa44;5f1fa7e6729773322b52903151f03192 5821824690;5839496681 -Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.UDG.TBcap double PfuTurbo DNA full-udg NextSeq 500 PAIRED Targeted-Capture 61593207 SRR11524778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/078/SRR11524778/SRR11524778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/078/SRR11524778/SRR11524778_2.fastq.gz da08f134f277c618d94998b3cf2d2bc5;c11ce149ad96df260f6d45b414e165bc 4072753252;4221966474 -Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.nUDG.TBcap double PfuTurbo DNA none NextSeq 500 PAIRED Targeted-Capture 19263550 SRR11524779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/079/SRR11524779/SRR11524779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/079/SRR11524779/SRR11524779_2.fastq.gz 51f77e2bc61a9d19e163d9f57e64ba37;61b3f94fbee53538f7dd4982f3bfceb6 1276503178;1317932918 -Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.nUDG.SG double PfuTurbo DNA none NextSeq 500 SINGLE WGS 3820818 SRR11524780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/080/SRR11524780/SRR11524780.fastq.gz 0f7fe191aeec722870941200ef7affa2 155645452 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 6746607 ERR4065482 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065482/ERR4065482.fastq.gz 2721e6407703803ff75ba7cd76405ccd 259006300 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 8925991 ERR4065483 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065483/ERR4065483.fastq.gz c3e33740e956d4f8c1458f86d64e431c 347088887 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 4239907 ERR4065501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/001/ERR4065501/ERR4065501_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/001/ERR4065501/ERR4065501_2.fastq.gz 76482ec38197859103c5dac08cf2e7a1;8b02b7b637bf636a0c843788a49ba255 133750930;139832156 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 3767036 ERR4065502 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065502/ERR4065502_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065502/ERR4065502_2.fastq.gz 4f892ef4252ed69a9b60b44228a21d00;e5a77df677e55b0126d6faea229f1a89 120329194;125115188 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529001 SJN003.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 38882227 ERR4065503 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065503/ERR4065503_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065503/ERR4065503_2.fastq.gz 178c0eb333ac6863733ed9053e3b3947;264c35ce49f2afdc7035887b88af58d2 1468405467;1586160626 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 7392875 ERR4065478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065478/ERR4065478.fastq.gz 0464edab02279e7c87320ff1eb6c0eac 275370271 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 7416023 ERR4065479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/009/ERR4065479/ERR4065479.fastq.gz 52e9b2e78f0fd1bb0d65c3390e825eb8 279472384 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 2835130 ERR4065497 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/007/ERR4065497/ERR4065497_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/007/ERR4065497/ERR4065497_2.fastq.gz 572df2c6bb98365da47c67e3aae4638c;e0231c0454e5f82687cbe4d000819df9 88602842;91766214 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 2522025 ERR4065498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065498/ERR4065498_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065498/ERR4065498_2.fastq.gz f83d48b12bf874b8353d7c6713058a9c;22bc9c6146256092713d56f2c79ee8a5 79706806;82858684 -Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528998 SJN001.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12797180 ERR4065490 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/000/ERR4065490/ERR4065490_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/000/ERR4065490/ERR4065490_2.fastq.gz 717843422974b2c80bc0fc5bfc67d174;d4e2f5da0715b2991e8e6bac04ffd86b 440494468;466292511 -Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 38126012 ERR4570267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570267/ERR4570267_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570267/ERR4570267_2.fastq.gz 2499a87a29c3981a535ad14cb7aae24e;89feac03e2c772b0400caf43c1b78cb1 2147755060;2179759864 -Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC2-C3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 79331895 ERR4570268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570268/ERR4570268_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570268/ERR4570268_2.fastq.gz d95945e3cf5d2406f13a0088c9e87f4e;76fee376de18eb4fa2e4cb68f3470caa 4341814775;4418527061 -Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 34027874 ERR4570269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570269/ERR4570269_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570269/ERR4570269_2.fastq.gz b466ead4397c423edca63d4f59c766f3;4a1b8555297a2d867a572447e58755c8 1923936650;1950760044 -Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 81093373 ERR4570270 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570270/ERR4570270_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570270/ERR4570270_2.fastq.gz 21f2b3504a49e401285d27d3dce1480a;0a46c6ebcfadaaceb0f00d325ec43b3c 3944368694;3956689098 -Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC2a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 40572494 ERR4570271 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570271/ERR4570271_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570271/ERR4570271_2.fastq.gz 373857376fc4d18457bccb8dc8e2fd62;18d633540233d4f1e7f0db54f7d6e091 1965614055;1974720648 -Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC2b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 46795553 ERR4570272 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570272/ERR4570272_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570272/ERR4570272_2.fastq.gz fdd0e0102e805def77b4f66d5ffc7861;10a23b6faf7357656270349d6feeca67 2281301918;2278560706 -Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC10 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 27410164 ERR4570273 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570273/ERR4570273_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570273/ERR4570273_2.fastq.gz 47b97503655520875109262fd3613721;d34f4124420e52af908c90bcbf522307 1465905954;1465993275 -Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC10R-11R double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 73261307 ERR4570274 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/004/ERR4570274/ERR4570274_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/004/ERR4570274/ERR4570274_2.fastq.gz ff8269dbcb5eabc3e26a54ce97f21cc1;5c452ea10042756b97c46fc9298831ca 4060323219;4113176733 -Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC12 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 38412120 ERR4570275 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/005/ERR4570275/ERR4570275_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/005/ERR4570275/ERR4570275_2.fastq.gz 754e10a8935529bc11125e8274f37f1f;f30da92049363522e88abc66ecaa3b0e 2122234883;2146833434 -Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC1-C4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 87352543 ERR4570276 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/006/ERR4570276/ERR4570276_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/006/ERR4570276/ERR4570276_2.fastq.gz 958c5e364568dc08e09fe176800fed87;5088a7205769e1cd442be3fc6db04cfc 4517923618;4680702651 -Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC6 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 59315415 ERR4570277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570277/ERR4570277_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570277/ERR4570277_2.fastq.gz be1545f24d635e66ab71fbe58c5cc618;5b31a8c876a4fc0ac819d35abfd4ad46 3153260824;3277079996 -Guellil2020 2020 10.1073/pnas.2009677117 SPN1 ENA PRJEB27821 ERS5051707 SC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 41388546 ERR4570278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570278/ERR4570278_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570278/ERR4570278_2.fastq.gz 91ff3f4483ec57621c0c2381bff1a1cb;0e75004d0be6a17ccfea1aabad2602fe 2024324187;2053584127 -Guellil2020 2020 10.1073/pnas.2009677117 SPN7 ENA PRJEB27821 ERS5051708 SC2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 79778440 ERR4570279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570279/ERR4570279_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570279/ERR4570279_2.fastq.gz a353c57936892d7f4e6f05a4abe4aece;79ed9dd9c0866decffe417232bf0ca04 3865188488;3887993872 -Guellil2020 2020 10.1073/pnas.2009677117 SPN8 ENA PRJEB27821 ERS5051709 SC3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 74387557 ERR4570280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570280/ERR4570280_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570280/ERR4570280_2.fastq.gz 4efea72be765bf2cf519e7cca7d20d72;973dbfc854cf35972be8d5d01127259e 3615565195;3653891586 -Guellil2020 2020 10.1073/pnas.2009677117 SPN13 ENA PRJEB27821 ERS5051710 SC4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 85008345 ERR4570281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570281/ERR4570281_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570281/ERR4570281_2.fastq.gz 846ba9ca5bce27a4ade684d78636fda9;17f88d815b8a9c2617a683be39069654 4204251858;4227173821 -Guellil2020 2020 10.1073/pnas.2009677117 SPN14 ENA PRJEB27821 ERS5051711 SC5 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 45162002 ERR4570282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570282/ERR4570282_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570282/ERR4570282_2.fastq.gz 2922c608b4d963b3455026469cab49ab;d2165b7d84ee47ff52e68eb5fe8d8f54 2143002903;2171304895 -Guellil2020 2020 10.1073/pnas.2009677117 SPN19 ENA PRJEB27821 ERS5051712 SC7 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 75698633 ERR4570283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570283/ERR4570283_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570283/ERR4570283_2.fastq.gz a9c152f8de0a045e91ecbc479955398a;a415ab76ec98b0d01523f45a4470d157 3544065234;3593699391 -Bos2011 2011 10.1038/nature10549 ES_11972 SRA SRP008060 SRS259946 individual_11972 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 4101028 SRR341962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341962/SRR341962.fastq.gz fac58a8e837ae753d1763facb80ea786 602854678 -Bos2011 2011 10.1038/nature10549 ES_6330 SRA SRP008060 SRS259944 individual_6330 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 2290804 SRR341960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341960/SRR341960.fastq.gz 3396956f77a739a69241444f0f7475cf 339550403 -Bos2011 2011 10.1038/nature10549 ES_8124 SRA SRP008060 SRS259947 individual_8124 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 1617517 SRR341963 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341963/SRR341963.fastq.gz 607e93c47d181dd59c7afdb531ff3eb7 242258560 -Bos2011 2011 10.1038/nature10549 ES_8291 SRA SRP008060 SRS259945 individual_8291 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 10546927 SRR341961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341961/SRR341961.fastq.gz 0d73a594ad2ec8407b289662e28d0d9d 1568165151 -Kay2014 2014 10.1128/mBio.01337-14 2568 ENA PRJEB6045 ERS430636 unspecified double Unknown none Illumina MiSeq PAIRED WGS 20097779 ERR472949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR472/ERR472949/ERR472949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR472/ERR472949/ERR472949_2.fastq.gz 0f0fc00573bd2760ace1849212cd1f1a;57e4357895e772ecc6e6d40d9941c81e 2072987388;2214003215 -Eerkens2018 2018 10.1016/j.ijpp.2018.05.001 16 SRA PRJNA377320 SRS2006287 RN4 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 7357756 SRR5297130 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR529/000/SRR5297130/SRR5297130_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR529/000/SRR5297130/SRR5297130_2.fastq.gz d188d5e22dbb0bf8275e67dd3db091da;60f13d4c136d75b5db61ef20a1173984 306644456;312782322 -Gelabert2016 2016 10.1073/pnas.1611017113 CA, CM, POS SRA PRJNA338278 SRS1609867 falciparum-definitiu-filtrat-050416_mt double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1220 SRR4034883 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR403/003/SRR4034883/SRR4034883.fastq.gz 24d66eb97c02077004d9f9382b2750bf 26832 -Gelabert2016 2016 10.1073/pnas.1611017113 CA, CM, POS SRA PRJNA338278 SRS1607662 vivax-definitiu-310316 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 459 SRR4019023 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR401/003/SRR4019023/SRR4019023.fastq.gz b2d5ee9ac55bbe7568fb24746955c749 11998 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2191016 ERR2204587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204587/ERR2204587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204587/ERR2204587_2.fastq.gz 170e8cb88bfdfd1d4930446ad98afadc;3fc3896ff38769ae1bb3775840bac1e4 94555050;97546002 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16886557 ERR2204588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204588/ERR2204588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204588/ERR2204588_2.fastq.gz e12f51d0b4898e0ef350bfd8b8d8017b;207513869e4c86bbbbb179faa269c1c5 650307928;719841467 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6049159 ERR2204589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204589/ERR2204589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204589/ERR2204589_2.fastq.gz 77f389997b096287031469e69537fdc1;b8872f65f769e058386ecec0e266b2df 268428474;276868562 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 69178818 ERR2204590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204590/ERR2204590_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204590/ERR2204590_2.fastq.gz 2888334f2fffa7e40a372fa66a5b1406;c821cbddb04da8dde1e3f243be52ebb2 2695206862;2984904513 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1114051 ERR2204627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204627/ERR2204627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204627/ERR2204627_2.fastq.gz 5fa9e5871f3f1fb434963176e8a5d0ad;c0dd5486388b9b90819c050e9cd9de7f 77122638;81454600 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 22144991 ERR2204591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204591/ERR2204591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204591/ERR2204591_2.fastq.gz 523fc359e60a8f722382d19de43c0545;1fde162bdc5166ff4c894926f29e7e07 960742974;996472857 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 49786999 ERR2204592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204592/ERR2204592_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204592/ERR2204592_2.fastq.gz dbeee745989f4a15ba6bed2ec749aaaf;4b29bfa7c2332f6c222a1a88a65ac513 2183717010;2250834665 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1482002 ERR2204628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204628/ERR2204628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204628/ERR2204628_2.fastq.gz dbd81836ad148afd5c1b175762fd2a16;e75ffd0e2a908cc28cca8af669aedc0e 105965924;111203152 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1331139 ERR2204664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204664/ERR2204664.fastq.gz 772fb6f62f85f1d2357ad43eb1189b54 50139896 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1302267 ERR2204665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204665/ERR2204665.fastq.gz cb9ddc6e4937e4d3b72507d1dccb96bc 49380986 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 606966 ERR2204666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204666/ERR2204666.fastq.gz fd7c7293e8028873daf806bd026d3952 22671078 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 595776 ERR2204667 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204667/ERR2204667.fastq.gz c035d0e2ee4ca2e469748a0136c9a8f7 22410039 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2713663 ERR2204593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204593/ERR2204593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204593/ERR2204593_2.fastq.gz 1555a8bc81b309f41b1fe13bc8b4101b;487a61ba3cac0b60f255c0649b006283 119879205;124497439 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 19361117 ERR2204594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204594/ERR2204594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204594/ERR2204594_2.fastq.gz d38b2c23c3fef1abbd1cc8105b8b4273;2b464e14f4a9929566309773ded25432 757265463;844538948 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6031347 ERR2204595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204595/ERR2204595_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204595/ERR2204595_2.fastq.gz 878d9894c2082cadab067635925ae467;fe8beda9dd47672cdc9b3bf428608f48 268254284;277665336 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 74254578 ERR2204596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204596/ERR2204596_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204596/ERR2204596_2.fastq.gz e1dd6d297a4a1a202862968cf5c669bc;1c9b4637e29cd520bd85de7075896412 2910159663;3226831974 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 981162 ERR2204631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204631/ERR2204631_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204631/ERR2204631_2.fastq.gz 8a097e8f8caffe4e0f33540098de6b1a;8221f6ed20712c1ead4625d17de20fbf 69894716;73281227 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 577367 ERR2204597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204597/ERR2204597_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204597/ERR2204597_2.fastq.gz d47787f35e3ebce8c073a371cc5360cf;b241cf7cb732bf3992e2eac65df8bc74 25637563;26399817 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 14997696 ERR2204598 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204598/ERR2204598_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204598/ERR2204598_2.fastq.gz bd698f65555275a4d38ca4250cb47fe2;c64b02cab1fe2c4ce6aa2e798f40511e 660330988;682138668 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1181985 ERR2204638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204638/ERR2204638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204638/ERR2204638_2.fastq.gz 8b4fd0536b20aa38ba3d09d0689cdbe3;c8606caa62f614cdc2ee684cad922553 85531586;90190057 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3202080 ERR2204668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204668/ERR2204668.fastq.gz d958171b1de1cdef41c9422e45af3a9c 119359197 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3168908 ERR2204669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204669/ERR2204669.fastq.gz fcb150b58749b64b3b5e9877b529697a 119016634 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 119654 ERR2204670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204670/ERR2204670.fastq.gz 8c21bba078ba6560e59858f8775a0011 4419107 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 116780 ERR2204671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204671/ERR2204671.fastq.gz 58bff0268c5718ed3f6f4adeb46d1282 4337045 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16924071 ERR2204609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204609/ERR2204609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204609/ERR2204609_2.fastq.gz d85a0e68545f51921c400af4be33abdc;011b4fda9819a1b70fe98268b2ad8955 742874757;768409849 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 24390623 ERR2204610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204610/ERR2204610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204610/ERR2204610_2.fastq.gz 2e842a9d2ed825b0fd1b2ff6eecf3e3c;e87e9914955ed194b320ffd79cf925f6 1062903912;1100055902 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 854434 ERR2204643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204643/ERR2204643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204643/ERR2204643_2.fastq.gz 1a0960477d587405c5dfd17d548fbf5b;4c35b72abc9308f03363dba3009f52d6 61634115;63692163 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1917888 ERR2204672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204672/ERR2204672.fastq.gz 6cd2332dbeb46759c3ae5c1f4c850b7c 71127869 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1885751 ERR2204673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204673/ERR2204673.fastq.gz 23582973725f78afc83549dbafcca994 70429217 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1450047 ERR2204674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204674/ERR2204674.fastq.gz b7e7cb60ed0cef1a87075108c70a97e7 53957393 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1424736 ERR2204675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204675/ERR2204675.fastq.gz 06b96a4ce0d24a88cbb22a91f1db82a8 53371892 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 861998 ERR2204611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_2.fastq.gz e97363c161e90082e6eb8fa53a3b8a58;939c0a52c40cec8b8cefdb38851435ba 39871514;41647617 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 28118462 ERR2204612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_2.fastq.gz ddfc21cae3d74b9d1c80f06f8115a71b;2b337c73947e90b37b4006bfed0e3fb5 1144496374;1271866282 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2863375 ERR2204613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_2.fastq.gz c3c2cd5a50992713d7ed50f5b91dd97b;eb94f2bba3435db0075a3b6fda474505 131797035;136207848 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 96106710 ERR2204614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_2.fastq.gz cdcbb32ff04e32423a6d04609a70870e;f010594dfbd557e727f45ed8fd262db3 3851279631;4247569192 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 994328 ERR2204644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_2.fastq.gz 73d0b651d0d03c55e2dddbe75d77dd9d;0c02751f3c5e30e5c43e352edc178964 73031399;75636413 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 21027208 ERR2204615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204615/ERR2204615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204615/ERR2204615_2.fastq.gz 12c0ab7606b36ca81047ed54b874af05;40f355aa1259ce1c9377a65344333adb 925834055;956189585 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 20646985 ERR2204616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204616/ERR2204616_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204616/ERR2204616_2.fastq.gz cf8a5144f707efa138684ee90c830bf3;664b010158b61047668de9cfc4f8772d 908566948;947660407 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1321538 ERR2204645 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204645/ERR2204645_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204645/ERR2204645_2.fastq.gz 386a7c47891422541a7792a6af88aee1;50fc79d910e4cb12deb99af7420f7e23 98100851;101277610 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1391859 ERR2204676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204676/ERR2204676.fastq.gz 3342810b95d187d398bbcb60a0684923 52304587 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1354167 ERR2204677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204677/ERR2204677.fastq.gz 2d551803bd0c8bdf0bf57830f365fba0 51250501 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1597821 ERR2204678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204678/ERR2204678.fastq.gz f53fb604d8d0aafd6d751daa9cadfcfe 60289525 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1573913 ERR2204679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204679/ERR2204679.fastq.gz bcd3d94184ed71e1117596650485a10b 59774068 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2922105 ERR2204617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204617/ERR2204617_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204617/ERR2204617_2.fastq.gz 0a5b696986baee082e69c4798635a717;e27ed32bbcf4d740332c3c163e4e6311 130308982;135057272 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5352349 ERR2204618 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204618/ERR2204618_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204618/ERR2204618_2.fastq.gz c956551b50f34769d279a173b41468e3;dc5e76767a87f3f29c6249a0e06ea794 243443370;250367589 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1021441 ERR2204646 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204646/ERR2204646_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204646/ERR2204646_2.fastq.gz c4dc9c1654647ea32dc67350de45e987;3a1e2b7c23048ea7675806778e5708f5 74114462;77928495 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2393094 ERR2204680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204680/ERR2204680.fastq.gz 1719d84aa05dfcd9801cf3d28ad18018 90786171 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2366898 ERR2204681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204681/ERR2204681.fastq.gz 9fbf2f2abc5cd6b4fd534288ab4b4314 90382769 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1254539 ERR2204682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204682/ERR2204682.fastq.gz e5d739c025f7442a2c5b82947b27f43a 46351621 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1234164 ERR2204683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204683/ERR2204683.fastq.gz c3386b39fb51699302f69cc918e24469 45908898 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 7535279 ERR2204619 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204619/ERR2204619_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204619/ERR2204619_2.fastq.gz c5bb9581faecaf63decc7c1af3d09b1b;fa29307a63d8776b46b401461d32fe32 328069124;340863827 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 44179809 ERR2204620 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204620/ERR2204620_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204620/ERR2204620_2.fastq.gz 64cd6863184fa26b0c5bbb13c0c29050;06a6a719e4c890044b1a3249e5a8c875 1941216627;2010362420 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 955924 ERR2204647 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204647/ERR2204647_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204647/ERR2204647_2.fastq.gz be4dfb07d71941c8b990b688ede1d2a2;967fc1a4ea50a3bd60428876b58a5e6f 68772346;71394741 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3579274 ERR2204684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204684/ERR2204684.fastq.gz 29d6b3445575748530f5db455009679a 132753967 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3508844 ERR2204685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204685/ERR2204685.fastq.gz a48e8c31994639a9a7273008ec0d3720 131105624 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 560097 ERR2204686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204686/ERR2204686.fastq.gz 14f1f9e84150163898895a7743f97fb5 20503117 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 550363 ERR2204687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204687/ERR2204687.fastq.gz abbe0c27d03ccbf05c4f1cce14e6d0af 20293793 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16122848 ERR2204621 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204621/ERR2204621_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204621/ERR2204621_2.fastq.gz dede134e78290732ff3677c78aeeb167;43be82cf3773445a540e94683c67080c 710461925;729569139 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 18986544 ERR2204622 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204622/ERR2204622_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204622/ERR2204622_2.fastq.gz fb01ed8ff925b65bc5013f43b09c8935;2d1cbd6a17eaf41b5effd164220d0562 825747399;858530340 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1003303 ERR2204648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204648/ERR2204648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204648/ERR2204648_2.fastq.gz 99fdb38e0c13ea905dba5a691237ac37;97d93fd993898f2acb66c53e5bfd4ca9 73521776;76929972 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1308229 ERR2204688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204688/ERR2204688.fastq.gz ebc1998e52d61e4a2e77a92cd77d75b7 48286986 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1286988 ERR2204689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204689/ERR2204689.fastq.gz b9bc8229a4e69eab4a5aa7fca599956b 47848588 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1171960 ERR2204690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204690/ERR2204690.fastq.gz 4df63d7c6d179369c647476d0d8e6176 43609405 -Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1146901 ERR2204691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204691/ERR2204691.fastq.gz 3b8ef127dfa5bbfd5b4cf814a7d1e83e 42972344 -Kilinc2021 2021 10.1126/sciadv.abc4587 Anosovo-1 (irk050) ENA PRJEB39378 ERS4827048 unspecified double Unknown none HiSeq X Ten SINGLE WGS 8087397 ERR4354257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR435/007/ERR4354257/ERR4354257.fastq.gz 328829bfd2ffd1415effe42361c4218b 377979745 -Kilinc2021 2021 10.1126/sciadv.abc4587 Kamenka-2 (yak023) ENA PRJEB39378 ERS4827062 unspecified double Unknown none HiSeq X Ten SINGLE WGS 22137832 ERR4354263 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR435/003/ERR4354263/ERR4354263.fastq.gz 84838ec2787a2cc7c97c215cf68d36b2 1153017002 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1216146 ERR3341156 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341156/ERR3341156.fastq.gz c5e83c8b318f88fe8810fdaec8bbf953 50822190 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1193618 ERR3341157 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341157/ERR3341157.fastq.gz 8ac0537ec86ff13d5551eea99f67d812 49837853 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1225618 ERR3341158 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341158/ERR3341158.fastq.gz 16f69430c41a88eeb2788b50f794d22c 52990676 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1215495 ERR3341159 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341159/ERR3341159.fastq.gz 7773b4335dfeb4015fb6c50dd38d010c 52402022 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1038275 ERR3341160 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341160/ERR3341160.fastq.gz 3b69d84db20a47417df9c5e338537d87 46827195 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1010048 ERR3341161 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341161/ERR3341161.fastq.gz 3d19eb4ad06a56f7ec42275e5c172f69 45550747 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1125689 ERR3341162 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341162/ERR3341162.fastq.gz 3f13d445781d6881661e94b283091be7 49897517 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1075581 ERR3341163 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341163/ERR3341163.fastq.gz 4ff046d98ab4fb5623acf6e4aa91b965 48265109 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1063262 ERR3341164 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341164/ERR3341164.fastq.gz fbe3d0f139846aa7663dcb353ed5ac84 47557811 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1189440 ERR3341165 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341165/ERR3341165.fastq.gz 98c652081aef5375bae8eaca014882f3 51944903 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1141471 ERR3341166 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341166/ERR3341166.fastq.gz 4a8a9d4927aed9021407981a97b1b93d 49898438 -Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1094833 ERR3341167 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341167/ERR3341167.fastq.gz 6199735d51d3de20fce203c497faa125 49063783 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5457082 ERR3341117 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341117/ERR3341117_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341117/ERR3341117_2.fastq.gz 5c57ba33bf588493d474c5a9989c221d;165c1dd2899068d993200f26bb4a1c2c 192001595;195456042 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 71283853 ERR3341168 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341168/ERR3341168.fastq.gz 05aada71b711573794eb04a4243dd268 2465759116 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 408763 ERR3341169 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341169/ERR3341169.fastq.gz bac458aa77e1cb4cf9fd1bde08335500 17856672 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 402035 ERR3341170 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341170/ERR3341170.fastq.gz f8f3cffd72f33408682dfceb37550af2 17543952 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 410982 ERR3341171 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341171/ERR3341171.fastq.gz dc658314c79f1eb8f39880e4358608d2 18547040 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 407232 ERR3341172 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341172/ERR3341172.fastq.gz de90a0e27916cacdbc6933a5fb0c57d2 18337622 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 348352 ERR3341173 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341173/ERR3341173.fastq.gz 91e27f543582c36e1b79d27f1d843d98 16306350 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 338348 ERR3341174 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341174/ERR3341174.fastq.gz 454a8c4bc98dda49cfaef75927465157 15839671 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 378480 ERR3341175 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341175/ERR3341175.fastq.gz 505343e08c506072c8b78fa7fccfdec8 17441857 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 362094 ERR3341176 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341176/ERR3341176.fastq.gz dfa9285ddcd2f905dcc55f03a83cb7ed 16891186 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 353675 ERR3341177 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341177/ERR3341177.fastq.gz 76de28278c5ca92bb7d23e19c81e35b9 16465794 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 394606 ERR3341178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341178/ERR3341178.fastq.gz ed197fd99218b0577e1f1379c9220fde 18010429 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 379035 ERR3341179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341179/ERR3341179.fastq.gz 307183dedb54071f172170d9701b2e90 17319267 -Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 365586 ERR3341180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341180/ERR3341180.fastq.gz 8494f752aa026aab42142e9e34d59a82 17055014 -Keller2019 2019 10.1073/pnas.1820447116 EDI001.A ENA PRJEB29991 ERS3465382 EDI001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13240300 ERR3341118 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341118/ERR3341118_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341118/ERR3341118_2.fastq.gz 3c506bb4d1ba0aaeb5cd3ce7cde47c17;64a52e954b271bb13e780a85ff1b3608 499322371;566823443 -Keller2019 2019 10.1073/pnas.1820447116 EDI003.A ENA PRJEB29991 ERS3465383 EDI003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15662135 ERR3341119 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341119/ERR3341119_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341119/ERR3341119_2.fastq.gz 3ac9355f4f04c9142cd6d5707dc4ad7d;c9492b63dae4082c9ffdf4cea031acfc 608378922;683447219 -Keller2019 2019 10.1073/pnas.1820447116 EDI003.A ENA PRJEB29991 ERS3465383 EDI003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 54203005 ERR3341120 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341120/ERR3341120_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341120/ERR3341120_2.fastq.gz 07ce89461558cf7bce132e41b4ac81a7;fc3ee7f1b43f83d9315e611a8e348c8c 2191286701;2395085572 -Keller2019 2019 10.1073/pnas.1820447116 EDI004.A ENA PRJEB29991 ERS3465384 EDI004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15103629 ERR3341121 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341121/ERR3341121_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341121/ERR3341121_2.fastq.gz 4e6494e3b0e89182c111743e72d142ce;43e14d9436f0e1b859578e42fd382f4f 565920609;633320202 -Keller2019 2019 10.1073/pnas.1820447116 EDI004.A ENA PRJEB29991 ERS3465384 EDI004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 49081333 ERR3341122 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341122/ERR3341122_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341122/ERR3341122_2.fastq.gz c5f9dd7692f65a6e74b252423875419a;2b0475ec4eaf27d9b83c6b5b893c6924 1913727660;2112298237 -Keller2019 2019 10.1073/pnas.1820447116 EDI005.A ENA PRJEB29991 ERS3465385 EDI005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13981206 ERR3341123 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341123/ERR3341123_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341123/ERR3341123_2.fastq.gz 7b1481220cad4d78608f8f25ab77d673;fa1f113d9c80c6045660becf53e15576 525956736;579638618 -Keller2019 2019 10.1073/pnas.1820447116 LSD001.A ENA PRJEB29991 ERS3465386 LSD001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12827658 ERR3341124 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341124/ERR3341124_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341124/ERR3341124_2.fastq.gz c0cda251c9efd4ef7e19dc77a3beed4f;88d5859517c0ef05948ae0b0c063c78c 490227433;528351451 -Keller2019 2019 10.1073/pnas.1820447116 LSD001.A ENA PRJEB29991 ERS3465386 LSD001.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7800620 ERR3341125 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341125/ERR3341125_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341125/ERR3341125_2.fastq.gz 6123dae3963c42acc1f92f62a76edee0;7f068cae1fd542d0ca1f97da7edad119 286986137;307075271 -Keller2019 2019 10.1073/pnas.1820447116 LSD002.A ENA PRJEB29991 ERS3465387 LSD002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8200424 ERR3341126 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341126/ERR3341126_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341126/ERR3341126_2.fastq.gz 06fd8abb3fa562ad317ed46fc1a343aa;df9235ab498a584709b86981493ea4ec 342402112;346441441 -Keller2019 2019 10.1073/pnas.1820447116 LSD007.A ENA PRJEB29991 ERS3465388 LSD007.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9622849 ERR3341127 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341127/ERR3341127_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341127/ERR3341127_2.fastq.gz 07935c347613e3ca6378271093f331a8;84bc6ead2f2a66e8234ed570c3c7f539 377610995;399031526 -Keller2019 2019 10.1073/pnas.1820447116 LSD007.A ENA PRJEB29991 ERS3465388 LSD007.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10474556 ERR3341128 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341128/ERR3341128_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341128/ERR3341128_2.fastq.gz 658e653fc447871a017f36229518f7f3;9eef751fd6969863dac9ccc42dd7ea38 420220636;444628592 -Keller2019 2019 10.1073/pnas.1820447116 LSD013.A ENA PRJEB29991 ERS3465389 LSD013.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9152230 ERR3341129 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341129/ERR3341129_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341129/ERR3341129_2.fastq.gz 1c6d5ae4e7318f1dda57a0716bb20275;afb4d9c5a9e22c202e95531479354d41 343850338;374258273 -Keller2019 2019 10.1073/pnas.1820447116 LSD019.A ENA PRJEB29991 ERS3465390 LSD019.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10232611 ERR3341130 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341130/ERR3341130_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341130/ERR3341130_2.fastq.gz 4699899f5c2f25e47678c0eb2ee81179;8c70baee3a35eb9cfbb583b9b47becf3 402522628;432203212 -Keller2019 2019 10.1073/pnas.1820447116 LSD019.A ENA PRJEB29991 ERS3465390 LSD019.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9170490 ERR3341131 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341131/ERR3341131_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341131/ERR3341131_2.fastq.gz 454e2ab429e3c9f1e2d2fa85e4c7a628;87c06b9d2ae381263bb10b4b2ced609a 369029070;402334808 -Keller2019 2019 10.1073/pnas.1820447116 LSD020.A ENA PRJEB29991 ERS3465391 LSD020.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11048609 ERR3341132 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341132/ERR3341132_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341132/ERR3341132_2.fastq.gz 1779e80616111ee81358c81205b9451f;3f90298c6c97567af1ee70725d618af0 417866911;438806156 -Keller2019 2019 10.1073/pnas.1820447116 LSD020.A ENA PRJEB29991 ERS3465391 LSD020.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11734905 ERR3341133 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341133/ERR3341133_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341133/ERR3341133_2.fastq.gz 31ddcadb394ad0b3d38140f8e324a372;2b925469e5e2b47cb6870a9a5751822d 427515167;444728959 -Keller2019 2019 10.1073/pnas.1820447116 LSD021.A ENA PRJEB29991 ERS3465392 LSD021.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8735508 ERR3341134 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341134/ERR3341134_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341134/ERR3341134_2.fastq.gz 2c491f149d1a603760ca1d80860ce8ee;94e84651564ba2c75fef27041fe56004 346026968;379225495 -Keller2019 2019 10.1073/pnas.1820447116 LSD021.A ENA PRJEB29991 ERS3465392 LSD021.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12071919 ERR3341135 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341135/ERR3341135_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341135/ERR3341135_2.fastq.gz 9cd14495d579f6ea1046c847c2f9a0af;32520193c1b80ed721dbf0348cee50c2 448535001;482294252 -Keller2019 2019 10.1073/pnas.1820447116 LSD022.A ENA PRJEB29991 ERS3465393 LSD022.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9243549 ERR3341136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341136/ERR3341136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341136/ERR3341136_2.fastq.gz 60bf8871523a12fa2a0985cf8837cd8a;106b4e80d73526dba8928df3b938e256 366396215;392306656 -Keller2019 2019 10.1073/pnas.1820447116 LSD023.A ENA PRJEB29991 ERS3465394 LSD023.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9419110 ERR3341137 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341137/ERR3341137_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341137/ERR3341137_2.fastq.gz aaef061379bbc08a493386e663bf758b;9cef6dc59f8b383ce66bae0f2ac63512 363812672;391877738 -Keller2019 2019 10.1073/pnas.1820447116 LSD023.A ENA PRJEB29991 ERS3465394 LSD023.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10946386 ERR3341138 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341138/ERR3341138_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341138/ERR3341138_2.fastq.gz 9299f04f2189056e6e109008a2e2d778;b45e647fdbaecbcd6b679dfcb840d7b5 436614709;479084787 -Keller2019 2019 10.1073/pnas.1820447116 LSD024.A ENA PRJEB29991 ERS3465395 LSD024.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9872445 ERR3341139 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341139/ERR3341139_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341139/ERR3341139_2.fastq.gz f147ac7a8273c0df87f3a463bc3755ae;f7c8256de38173aa5dde0805eacb5782 378676515;407561501 -Keller2019 2019 10.1073/pnas.1820447116 LSD024.A ENA PRJEB29991 ERS3465395 LSD024.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11529710 ERR3341140 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341140/ERR3341140_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341140/ERR3341140_2.fastq.gz bd6b50b03e919cef92c185a58bce624f;988d94928fffa57bd4e25cc283e92890 462329186;508394154 -Keller2019 2019 10.1073/pnas.1820447116 LSD026.A ENA PRJEB29991 ERS3465396 LSD026.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8520456 ERR3341141 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341141/ERR3341141_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341141/ERR3341141_2.fastq.gz 04efa5911540000730edb8dd379ae879;32cf00af941afcb557915fbc446b1661 332785633;351862597 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337433 ERR3341181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341181/ERR3341181.fastq.gz 721653c2448ea3905664a8f210d6a558 14187965 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330294 ERR3341182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341182/ERR3341182.fastq.gz 84b3d0a7359f30b390b2333da6365653 13880042 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 340109 ERR3341183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341183/ERR3341183.fastq.gz 9199b8e42c5ab981e204dab4b006a930 14799069 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337297 ERR3341184 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341184/ERR3341184.fastq.gz 90b21fb18adf96b5f9b0443821d63e06 14645114 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289661 ERR3341185 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341185/ERR3341185.fastq.gz 72c96f56690f7e5aa4e46cd403693b88 13126502 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284861 ERR3341186 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341186/ERR3341186.fastq.gz 0250b8dc05fd032c429a0f745b434c58 12906719 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 314399 ERR3341187 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341187/ERR3341187.fastq.gz 3675e6c3f406a287bdc8e7065d02554c 14018639 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 300470 ERR3341188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341188/ERR3341188.fastq.gz 0c3f7414791eb1f895da434e7a501f43 13555872 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 295806 ERR3341189 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341189/ERR3341189.fastq.gz ae4c1e823c26dfdfbafcc6fc437ca50a 13308504 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 329477 ERR3341190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341190/ERR3341190.fastq.gz 0b5500ad903a2e3af22cb505f401eecd 14476210 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316088 ERR3341191 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341191/ERR3341191.fastq.gz 87275183fb0403b67756eb3b586bd836 13915832 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 304234 ERR3341192 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341192/ERR3341192.fastq.gz d32114b0e7a838c790aa431d0e57c065 13702192 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4200120 ERR3341142 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341142/ERR3341142_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341142/ERR3341142_2.fastq.gz b4e10bf43b20a113572f0d565bb9a5f8;d6941f8a16e2810cf964843a2d8a1483 128782166;133709304 -Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15279872 ERR3341143 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341143/ERR3341143_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341143/ERR3341143_2.fastq.gz a92e1b9357158d8155752fa1e484a8ef;a0b405383c76d4369b37df240d6b7b77 458143212;460671413 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 313761 ERR3341193 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341193/ERR3341193.fastq.gz 9ab31d64b380498dd82f8642f9381a2e 13758923 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 308159 ERR3341194 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341194/ERR3341194.fastq.gz 23e2a01b5d622adb0b210888fed3959d 13516598 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 309095 ERR3341195 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341195/ERR3341195.fastq.gz 765b5ea33eec31182af90c91d03de90d 13982154 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 305424 ERR3341196 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341196/ERR3341196.fastq.gz a25c55770cb5ee1e0b32d5af3e467697 13800549 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 260485 ERR3341197 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341197/ERR3341197.fastq.gz 188e350879c58fb6c3d90e8aadd43d65 12321291 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 253861 ERR3341198 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341198/ERR3341198.fastq.gz 9a47318e81cd4b61a610afee4b1eef8c 12023715 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 285320 ERR3341199 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341199/ERR3341199.fastq.gz 0ee7d474245c43fcf111637e9cae898f 13301110 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 269073 ERR3341200 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341200/ERR3341200.fastq.gz aaa3c6823f313a2aed5350a336291418 12723639 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 268626 ERR3341201 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341201/ERR3341201.fastq.gz a6679359720c3532bfebd321b165c02c 12619790 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303859 ERR3341202 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341202/ERR3341202.fastq.gz 57c0c8f5ff4bc75bcb111be5a7eb48b7 13931538 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 288202 ERR3341203 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341203/ERR3341203.fastq.gz 90a82a00c2254e2ac59db8242b438794 13275464 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 276536 ERR3341204 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341204/ERR3341204.fastq.gz 3784182e2e0d28eca719c2c138766467 12990642 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 342478 ERR3341205 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341205/ERR3341205.fastq.gz 5d55d508f7b36e4fdbdeb9fcc8e219b8 14651730 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337312 ERR3341206 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341206/ERR3341206.fastq.gz 0d8b8095f64978c126cca140cfb129b1 14407708 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 343851 ERR3341207 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341207/ERR3341207.fastq.gz 08f66fd854728cfd6851812627aa6dd3 15212782 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 342419 ERR3341208 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341208/ERR3341208.fastq.gz 16ef7c43a9d6d236a4533308025e44ae 15106750 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289992 ERR3341209 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341209/ERR3341209.fastq.gz 84225fd17a241953e04424de60e92a4d 13328867 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284058 ERR3341210 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341210/ERR3341210.fastq.gz fd707ace78eec0de6817504f66282b6d 13065310 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316879 ERR3341211 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341211/ERR3341211.fastq.gz 648e987331519fe2722f674abf5c183a 14341852 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303039 ERR3341212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341212/ERR3341212.fastq.gz 027fcc0d4ecb30f4dc317f92743a30b8 13893140 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 298547 ERR3341213 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341213/ERR3341213.fastq.gz d3a6a57119b78a945797b747087ccc7a 13650024 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332989 ERR3341214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341214/ERR3341214.fastq.gz 87bf6d8fcf8f1d66b14d70e114b676f1 14882229 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 320153 ERR3341215 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341215/ERR3341215.fastq.gz c08bad851d2a71d388fe5e821de8ef06 14332133 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 305894 ERR3341216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341216/ERR3341216.fastq.gz a01568b40cc62b16e16dba3487b8ce2d 13986137 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5151778 ERR3341144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341144/ERR3341144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341144/ERR3341144_2.fastq.gz e636816a1f3b8e7edf0c5788b13c6b19;094ba0d85f943889ceff3149665ec5e5 167076787;167246096 -Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 18196950 ERR3341145 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341145/ERR3341145_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341145/ERR3341145_2.fastq.gz f1c0d8e0722ada11f3446a75bbc36be1;3f4bcb2f30a886b503effb839896fe59 568090244;556275886 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 414275 ERR3341217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341217/ERR3341217.fastq.gz 6fdab1998a1c3f3e46664be94a0b402d 17654704 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 409102 ERR3341218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341218/ERR3341218.fastq.gz 425f4cf2913ccc7efad8e7c0f8c2c0bf 17432546 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 419504 ERR3341219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341219/ERR3341219.fastq.gz c7545a6d9210d157f5cd6664f0e0c9a9 18502523 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 415867 ERR3341220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341220/ERR3341220.fastq.gz 96e7445122f2dc110d1d9e260337c9d8 18301274 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 355152 ERR3341221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341221/ERR3341221.fastq.gz 031fe8e6b2bd879fed8dcb1a5a62c6b0 16301291 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 348369 ERR3341222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341222/ERR3341222.fastq.gz 8b171804f38c8d9160950aaf4be85ede 15979607 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 385376 ERR3341223 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341223/ERR3341223.fastq.gz a8550589794de621a0245cca718fda15 17387680 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372068 ERR3341224 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341224/ERR3341224.fastq.gz 63436bdc1cefc554b02a3d4dda09f011 17002118 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 364921 ERR3341225 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341225/ERR3341225.fastq.gz b4188442421ccb18d16bd381bad26bb8 16607429 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 403523 ERR3341226 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341226/ERR3341226.fastq.gz 0d05c70288080a9d973399def702efac 17968496 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 389673 ERR3341227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341227/ERR3341227.fastq.gz ce0852370284933682a90791bf991554 17376972 -Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 373401 ERR3341228 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341228/ERR3341228.fastq.gz e74b82a5e61f7832f8391fcb2202f717 17043545 -Keller2019 2019 10.1073/pnas.1820447116 PET004.A ENA PRJEB29991 ERS3465404 PET004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7203683 ERR3341146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341146/ERR3341146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341146/ERR3341146_2.fastq.gz 9f3b5e76f0f204bd399a861659e79fc0;4c33bae8290b459ae0937c28dfe6f84a 261686052;266311101 -Keller2019 2019 10.1073/pnas.1820447116 PET004.A ENA PRJEB29991 ERS3465404 PET004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 55960135 ERR3341229 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341229/ERR3341229.fastq.gz 2e413be9481bf462aec401e6a9070d82 1985318316 -Keller2019 2019 10.1073/pnas.1820447116 PET005.A ENA PRJEB29991 ERS3465405 PET005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4909123 ERR3341147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341147/ERR3341147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341147/ERR3341147_2.fastq.gz a87fe8c74d73822bedc6bbe62749dbee;e6abdd61735d1b99b13857b82c5f5b81 179461167;184388550 -Keller2019 2019 10.1073/pnas.1820447116 PET005.A ENA PRJEB29991 ERS3465405 PET005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 94267093 ERR3341230 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341230/ERR3341230.fastq.gz af0b00f56756712d2a8b002c99a0d2c6 3384003588 -Keller2019 2019 10.1073/pnas.1820447116 PET006.A ENA PRJEB29991 ERS3465406 PET006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4962456 ERR3341148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341148/ERR3341148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341148/ERR3341148_2.fastq.gz 089291bebaaf0b0fab0d617a551a39e4;662549560e9c9ac4baee512736e8edfe 177888268;181165912 -Keller2019 2019 10.1073/pnas.1820447116 PET006.A ENA PRJEB29991 ERS3465406 PET006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 51590501 ERR3341231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341231/ERR3341231.fastq.gz 7118570cfd54fc2819bb85fa1b47e586 1806647219 -Keller2019 2019 10.1073/pnas.1820447116 UNT002.A ENA PRJEB29991 ERS3465407 UNT002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3960713 ERR3341149 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341149/ERR3341149_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341149/ERR3341149_2.fastq.gz 270f608a1c4d045a9fbc38b7ba8a1404;ee92c33a057abaf40aa619c38e9297d5 145862631;151564730 -Keller2019 2019 10.1073/pnas.1820447116 UNT002.A ENA PRJEB29991 ERS3465407 UNT002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 93163484 ERR3341232 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341232/ERR3341232.fastq.gz 1aa36f4e8471db60cdbefcab51cefdda 3359179573 -Keller2019 2019 10.1073/pnas.1820447116 UNT003.A ENA PRJEB29991 ERS3465408 UNT003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4075646 ERR3341150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341150/ERR3341150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341150/ERR3341150_2.fastq.gz 83b2f6dcd894e662e1a1eea539382dc6;2a5a6fc194e0b05514fc96944a1a5607 150147546;157702331 -Keller2019 2019 10.1073/pnas.1820447116 UNT003.A ENA PRJEB29991 ERS3465408 UNT003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 38688573 ERR3341233 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341233/ERR3341233.fastq.gz 834fe15859229d551d5e2845d37e8f2c 1396529839 -Keller2019 2019 10.1073/pnas.1820447116 UNT004.A ENA PRJEB29991 ERS3465409 UNT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4139567 ERR3341151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341151/ERR3341151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341151/ERR3341151_2.fastq.gz c9819f94cc56e76244fe2ee916dd2a13;a110ce4bfbeda5efc7665c394e8b3cc8 149492746;155589180 -Keller2019 2019 10.1073/pnas.1820447116 UNT004.A ENA PRJEB29991 ERS3465409 UNT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28257946 ERR3341234 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341234/ERR3341234.fastq.gz 74460c176bf094fb81f88639d288e6d5 993703599 -Keller2019 2019 10.1073/pnas.1820447116 UNT005.A ENA PRJEB29991 ERS3465410 UNT005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3665895 ERR3341152 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341152/ERR3341152_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341152/ERR3341152_2.fastq.gz 48a4138b6d3784ae38ed1adb57c0f58c;4c99fa8d1f4629d1051e942e571e1303 134105815;139631926 -Keller2019 2019 10.1073/pnas.1820447116 UNT006.A ENA PRJEB29991 ERS3465411 UNT006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3950908 ERR3341153 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341153/ERR3341153_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341153/ERR3341153_2.fastq.gz 796c176c1ea432fb41be293bc5bdcba3;faccfd6e0cbcf1ec8de71cdf023b2a65 144786194;149764467 -Keller2019 2019 10.1073/pnas.1820447116 UNT006.A ENA PRJEB29991 ERS3465411 UNT006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 97645916 ERR3341235 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341235/ERR3341235.fastq.gz b91026910bbc5fd30d7cdd388ab616fb 3482398837 -Keller2019 2019 10.1073/pnas.1820447116 VAL001.B ENA PRJEB29991 ERS3465403 VAL001.B0102.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4325927 ERR3341154 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341154/ERR3341154_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341154/ERR3341154_2.fastq.gz 18ed16e4e05d7eff9c52214a1aaa130e;c949c8ffaa1fe28536a8bd17bc98febe 153736170;156407857 -Keller2019 2019 10.1073/pnas.1820447116 VAL001.B ENA PRJEB29991 ERS3465403 VAL001.B0102.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 64253449 ERR3341236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341236/ERR3341236.fastq.gz 9ba33e2545323285b4e6422e0f47e038 2233897849 -Keller2019 2019 10.1073/pnas.1820447116 WAG001.A ENA PRJEB29991 ERS3465412 WAG001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3455999 ERR3341155 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341155/ERR3341155_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341155/ERR3341155_2.fastq.gz 4fefec04c0596a5778deb3ca7bcd4e53;a845640cf66bc875ef0a3e82f64d85c7 129212241;132652236 -Keller2019 2019 10.1073/pnas.1820447116 WAG001.A ENA PRJEB29991 ERS3465412 WAG001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 78170904 ERR3341237 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341237/ERR3341237.fastq.gz 44bcaca08ae0eb18fdf483c59e154cde 2822415925 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1429 ENA PRJEB41353 ERS5335226 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 544611092 ERR4845178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/008/ERR4845178/ERR4845178.fastq.gz 211a8e3da724938397e0ed70cde43ce7 24825310265 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1510 ENA PRJEB41353 ERS5335227 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 15763343 ERR4845180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/000/ERR4845180/ERR4845180.fastq.gz 39a2c2717259d63d6a0bc8bc1887c3b5 750879070 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1558 ENA PRJEB41353 ERS5335228 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 641527718 ERR4845181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/001/ERR4845181/ERR4845181.fastq.gz 7116ac5df4f4a41e01d1b1a47f1ea592 27797999211 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1579 ENA PRJEB41353 ERS5335229 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 533324715 ERR4845182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/002/ERR4845182/ERR4845182.fastq.gz 0cd3c58a537a3b586bfec536f6ae44a8 37090052158 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1599 ENA PRJEB41353 ERS5335230 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 6435352 ERR4845110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/000/ERR4845110/ERR4845110.fastq.gz 387b1905b9773d2113c7207f51c39a5b 313238939 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1600 ENA PRJEB41353 ERS5335231 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 530411412 ERR4845295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/005/ERR4845295/ERR4845295.fastq.gz 77070b2bb01098029d6e59f9adfece46 20188538743 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1607 ENA PRJEB41353 ERS5335232 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 184903636 ERR4845296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/006/ERR4845296/ERR4845296.fastq.gz 6be11d2282fdbf0a4967fbdca90618dd 7490843625 -Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1638 ENA PRJEB41353 ERS5335233 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 133292730 ERR4845297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/007/ERR4845297/ERR4845297.fastq.gz 5b3f16d6a291398ce3c7d919bce7199b 5112902243 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Ellwangen 549_O ENA PRJEB29990 ERS3607398 ELW098.A0101_549O double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 45435815 ERR3457591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457591/ERR3457591.fastq.gz 3420b4da37a51dd9a356e4f6876c07d5 1665090988 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Ellwangen 549_O ENA PRJEB29990 ERS3607398 ELW098.A0101_549O double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4322824 ERR3457862 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457862/ERR3457862_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457862/ERR3457862_2.fastq.gz a84a9ca8a7915bc3e7f7333ccfaf1fcc;d3940c5a32493c8e8f6e832eba8b3ed6 160228111;166478530 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4110771 ERR3457583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457583/ERR3457583.fastq.gz 286870fd5021ccc01c693cb4487430fc 299204372 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4197705 ERR3457584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457584/ERR3457584.fastq.gz 3ca0e46ef0ff30c0092778814c879d9b 295480906 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4039569 ERR3457585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457585/ERR3457585.fastq.gz fdd8a52f75ff8192aeb25531218c1dda 301089527 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4165912 ERR3457586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457586/ERR3457586.fastq.gz e01b15fcff4218b90f606016e0b4a920 306793635 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3208396 ERR3457857 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457857/ERR3457857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457857/ERR3457857_2.fastq.gz 381edeeccc80768d5936ceab0c07eac5;4747ffb6e756060a9b63add765095d67 131124372;140929609 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED028.A0102 ENA PRJEB29990 ERS3607392 BED028.A0102_8103 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 23606891 ERR3457582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457582/ERR3457582.fastq.gz abe24bb46ac2c2fb954a763df14a9b08 878579766 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED028.A0102 ENA PRJEB29990 ERS3607392 BED028.A0102_8103 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4826853 ERR3457856 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457856/ERR3457856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457856/ERR3457856_2.fastq.gz 51bceecde05409f212df88477ea10e4e;22247653aff4eadd08444cd7879aaf72 182995861;193347261 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED034.A0102 ENA PRJEB29990 ERS3607394 BED034.A0102_8198 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 26579060 ERR3457587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457587/ERR3457587.fastq.gz 13800449fb6acb0dfd177c32c46651d4 1008043470 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED034.A0102 ENA PRJEB29990 ERS3607394 BED034.A0102_8198 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3425659 ERR3457858 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457858/ERR3457858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457858/ERR3457858_2.fastq.gz ea5aefc7a55dba053e8102c333ebd041;ea60ffa834916e5f32857bd5284eeb9d 133094381;139480463 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED024.A0102 ENA PRJEB29990 ERS3607391 BED024.A0102_8052 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7723948 ERR3457581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457581/ERR3457581.fastq.gz 19f8a1392b2c21a5c65cb4149a89583f 292044830 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED024.A0102 ENA PRJEB29990 ERS3607391 BED024.A0102_8052 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3643540 ERR3457855 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457855/ERR3457855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457855/ERR3457855_2.fastq.gz 3ba39f5a44778a0606a9a3772cea8d8e;f8463662126f8e6ee01ec249cc9a6067 140152301;147690336 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED038.A0102 ENA PRJEB29990 ERS3607395 BED038.A0102_8216 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28179885 ERR3457588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457588/ERR3457588.fastq.gz 8ac4b2f4a9ce374db7843a40fe1322dc 1061202233 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BED038.A0102 ENA PRJEB29990 ERS3607395 BED038.A0102_8216 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3656608 ERR3457859 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457859/ERR3457859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457859/ERR3457859_2.fastq.gz 08e182a1dcd310528197894f0af71979;d4e837bf013af9cc5a7faaa1dfd38e8c 140968617;147967338 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA001.A0101 ENA PRJEB29990 ERS3607396 BRA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17284600 ERR3457589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457589/ERR3457589.fastq.gz 14fd2bfe7399fdedec448e11bffea7d9 605128431 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA001.A0101 ENA PRJEB29990 ERS3607396 BRA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4366832 ERR3457860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457860/ERR3457860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457860/ERR3457860_2.fastq.gz 48259e7b755aa44e339709c49225c202;3c9fd523ff98c8e06904c89b0218372c 155140257;159509234 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA003.A0101 ENA PRJEB29990 ERS3607397 BRA003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 41502661 ERR3457590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457590/ERR3457590.fastq.gz 72730be1c933f9b3cb5d1222fea45c61 1528548420 -Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA003.A0101 ENA PRJEB29990 ERS3607397 BRA003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3045571 ERR3457861 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457861/ERR3457861_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457861/ERR3457861_2.fastq.gz 6aaa2862b5baa55bfa9b4ca62c0612db;c285e5cd2a9f8d50fc6c76feafe8a1db 115704883;120515587 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI009.A0101 ENA PRJEB29990 ERS3607399 LAI009.A0101_RT88 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 20771222 ERR3457592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457592/ERR3457592.fastq.gz 3eef63faa39ba12d47ca97a72a34ce21 730453257 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI009.A0101 ENA PRJEB29990 ERS3607399 LAI009.A0101_RT88 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4389340 ERR3457863 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457863/ERR3457863_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457863/ERR3457863_2.fastq.gz c071d828740b98e60443c4252fc42c6c;4676ba81721d55f2083a659c7fb213a1 157656665;162524879 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI010.A0101 ENA PRJEB29990 ERS3607400 LAI010.A0101_RT89 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 65815041 ERR3457593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457593/ERR3457593.fastq.gz 631291fdb71dcdb86fcad4c2b9926dd2 2325127893 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI010.A0101 ENA PRJEB29990 ERS3607400 LAI010.A0101_RT89 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3797474 ERR3457864 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457864/ERR3457864_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457864/ERR3457864_2.fastq.gz 9780cae5807a5066d1f49f30a1f0ee2b;eaa76b2bc29b1eb74a98eb3f85cfa7ff 137461412;142074133 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 467251 ERR3457594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457594/ERR3457594.fastq.gz bea7fe8fcf6fec49fb64f435f491954e 22194474 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 454713 ERR3457595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457595/ERR3457595.fastq.gz ca17847e19a725c559c78d33268306ce 21541626 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 510112 ERR3457596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457596/ERR3457596.fastq.gz b724ecfe178107c3b6e84e6babf105ab 23623709 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 488676 ERR3457597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457597/ERR3457597.fastq.gz de4999f4f285b3bf919b4eac31415530 22704202 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 523492 ERR3457598 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457598/ERR3457598.fastq.gz 85f754812c980d5379895ce4a6b3f30c 23222419 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 516200 ERR3457599 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457599/ERR3457599.fastq.gz 9f4fb070cdad72ca6655d0cce60a8703 22869804 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 518872 ERR3457600 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457600/ERR3457600.fastq.gz 941c3b90765d9fc1164fbddfb4f5e22d 23725553 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 515783 ERR3457601 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457601/ERR3457601.fastq.gz f638521bc07803e12505cc59c9115e4e 23537846 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 440172 ERR3457602 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457602/ERR3457602.fastq.gz d7be66b1001a6a4d494239fa98ee9b2d 21045160 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 432657 ERR3457603 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457603/ERR3457603.fastq.gz 52540d7604c00f2d34b023e95ac7cda8 20685093 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 481342 ERR3457604 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457604/ERR3457604.fastq.gz 4b70f33fd3c5290284c30a4d386f38c8 22668994 -Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 459468 ERR3457605 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457605/ERR3457605.fastq.gz e16b417cf2ac3970c506b68e5d644141 21909585 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 674838 ERR3457606 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457606/ERR3457606.fastq.gz 42cd2fcce9cfde7f58504025b9300b35 31567988 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 655431 ERR3457607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457607/ERR3457607.fastq.gz 1217444496f025b98ece48d860b2fe92 30596970 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 733295 ERR3457608 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457608/ERR3457608.fastq.gz 0eb8ef6fdecdbf75176117ea0e452697 33385798 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 701989 ERR3457609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457609/ERR3457609.fastq.gz 236d4bbd825566ba3bbb2316c730dbff 32040487 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 743480 ERR3457610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457610/ERR3457610.fastq.gz 7c50a20affe855a5711c0de6832cd62d 32439200 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 732773 ERR3457611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457611/ERR3457611.fastq.gz 906f87ab87f0f5ada23b51315ddea61e 31961427 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 745109 ERR3457612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457612/ERR3457612.fastq.gz 5a68b59a4d54ed35921006eaf3e533db 33564559 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 739705 ERR3457613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457613/ERR3457613.fastq.gz bb6431c360ef656776a18a5876ab4a1f 33212248 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 634030 ERR3457614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457614/ERR3457614.fastq.gz de52d2302b47dfce3507d77f1b607220 29882156 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 618744 ERR3457615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457615/ERR3457615.fastq.gz a34a154c467b2fae00fa75dbecad60f1 29183603 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 688450 ERR3457616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457616/ERR3457616.fastq.gz 8d53933cea5fcbc50bef989475566364 31929808 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 657483 ERR3457617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457617/ERR3457617.fastq.gz 203c3b092ca36f666ca7324cee3093f4 30856827 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 106782 ERR3457618 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457618/ERR3457618.fastq.gz c0e443dc0450a25ed8f78a8a6856ffcb 5179005 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 104021 ERR3457619 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457619/ERR3457619.fastq.gz ee967916907d0b7bad0164d2a565b5d4 5041460 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 117809 ERR3457620 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457620/ERR3457620.fastq.gz 234a2220042b8ab73934498f9e8ed5a3 5575416 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 111773 ERR3457621 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457621/ERR3457621.fastq.gz e512efaebda3fb63980a770750d18fc9 5315198 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 122490 ERR3457622 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457622/ERR3457622.fastq.gz 829989dc81f55c71f3ca4048013ed091 5556614 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 120317 ERR3457623 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457623/ERR3457623.fastq.gz 0eee55ee051eb9ba80a9da09f41c37f3 5450605 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 119892 ERR3457624 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457624/ERR3457624.fastq.gz b841f38c5f9e51d81cd2e4dd5c5fe328 5591574 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 117633 ERR3457625 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457625/ERR3457625.fastq.gz b3f0a55d10001eb402e7efccf3cb104b 5479239 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 100919 ERR3457626 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457626/ERR3457626.fastq.gz d15e0c97a0e29eb2bc9752452b5c89dc 4927861 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 98883 ERR3457627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457627/ERR3457627.fastq.gz f6042c63aa3802c0e25c5e09a3c6c674 4840506 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 110500 ERR3457628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457628/ERR3457628.fastq.gz 1cf7399a787f8d577f395e7e796a6005 5326210 -Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 104436 ERR3457629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457629/ERR3457629.fastq.gz 44cb289057be64aae33e5dfe43a93e56 5106514 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB005.A/B0101 ENA PRJEB29990 ERS3607406 NAB005.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 57105166 ERR3457643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457643/ERR3457643.fastq.gz c3619e267fd43e5cbd3e21b10bdb67fa 2099624398 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB005.A/B0101 ENA PRJEB29990 ERS3607406 NAB005.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4317456 ERR3457866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457866/ERR3457866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457866/ERR3457866_2.fastq.gz a234c4f4fe683cbb48bae45cfa854843;66b8fa693ded924ba94b76e9f59e8671 162038278;169102617 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 499182 ERR3457630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457630/ERR3457630.fastq.gz 4cc596b910af1b8d67b43cb5e0a842e1 23570053 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 487483 ERR3457631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457631/ERR3457631.fastq.gz 69f8beb7e563393dd292ee309e58cefb 22970856 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 542481 ERR3457632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457632/ERR3457632.fastq.gz 7219092248bce2b1376361b784dff1e1 24975372 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521939 ERR3457633 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457633/ERR3457633.fastq.gz 36014c6a3eef46bdaa69e80faae40c7d 24076843 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 556855 ERR3457634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457634/ERR3457634.fastq.gz f72270380b5ee37de51a06577d60d77d 24570242 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 548880 ERR3457635 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457635/ERR3457635.fastq.gz d35cb86d0cf15c41b9fc57b5fe2dd303 24191849 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 557120 ERR3457636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457636/ERR3457636.fastq.gz 69de8774b15f063c457f9fd46d5656df 25352935 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 552942 ERR3457637 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457637/ERR3457637.fastq.gz 3c7578d223c989bfbb1eecc2b6004264 25092176 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 468620 ERR3457638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457638/ERR3457638.fastq.gz 26d92e69c184f69e49605d77920e8486 22293641 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 460779 ERR3457639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457639/ERR3457639.fastq.gz c3852b8e450d40e8da24b0fabf5d87c5 21914209 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 510670 ERR3457640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457640/ERR3457640.fastq.gz 0194a5745b6a8e4b421027af633a1f94 23916875 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 490518 ERR3457641 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457641/ERR3457641.fastq.gz 22da1e68be08f1db54ebf886191ff61b 23237496 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB004.A0101 ENA PRJEB29990 ERS3607405 NAB004.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 79317839 ERR3457642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457642/ERR3457642.fastq.gz 4caacf9a019580098e3593058f835c2e 2851097712 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB004.A0101 ENA PRJEB29990 ERS3607405 NAB004.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4602536 ERR3457865 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457865/ERR3457865_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457865/ERR3457865_2.fastq.gz 54d368f3e82b859509aeefa857ef5cd2;1bf114ed85e42f77b349bdd85524c8f0 168409030;172421144 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS002.A0101 ENA PRJEB29990 ERS3607408 NMS002.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 58901955 ERR3457656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457656/ERR3457656.fastq.gz b2c25de15721f37fef4953cbcfe31131 2320185343 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS002.A0101 ENA PRJEB29990 ERS3607408 NMS002.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13469750 ERR3457867 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457867/ERR3457867_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457867/ERR3457867_2.fastq.gz 4ab5577e5639569ac1fb6394cd084d95;63f7ebcbe93b80ec9dd8a4347ffb1ddb 549976994;627803525 -Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS003.A0101 ENA PRJEB29990 ERS3607409 NMS003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13265717 ERR3457868 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457868/ERR3457868_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457868/ERR3457868_2.fastq.gz 2c24fccb3357b14910a2757e4a959ff0;f08725754f7a73edbf501962cd281246 540077704;615104009 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STA001.A0101 ENA PRJEB29990 ERS3607410 STA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 25808344 ERR3457657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457657/ERR3457657.fastq.gz e666999bea1ad374884d559c3c28d8e5 926174210 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STA001.A0101 ENA PRJEB29990 ERS3607410 STA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4322417 ERR3457869 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457869/ERR3457869_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457869/ERR3457869_2.fastq.gz c1318d61565c8de294e692404bb1896c;d73a53224a3905f46e5328c28a0df32d 159039161;165110724 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1285453 ERR3457754 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457754/ERR3457754.fastq.gz 7e8e6c4a17d2e0b4af710741a1cb31f9 61791046 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1250908 ERR3457755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457755/ERR3457755.fastq.gz 42821e30b399769561b4915b86cbf5fd 60024958 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1392514 ERR3457756 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457756/ERR3457756.fastq.gz b61e801dd4fbc4212c9723b718e60e49 65170276 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1341950 ERR3457757 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457757/ERR3457757.fastq.gz e8fe80d9ad1dde535d7c1647d78e2a25 62942061 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1419230 ERR3457758 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457758/ERR3457758.fastq.gz 735fe4f251fc27cea1e624595b61a806 63728406 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1399427 ERR3457759 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457759/ERR3457759.fastq.gz bfc7fbf0d8e3c2985a3c7567e9389f1d 62740356 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1424320 ERR3457760 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457760/ERR3457760.fastq.gz 6fd5724f19ded755a05c210cd2ea1587 65894531 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1416187 ERR3457761 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457761/ERR3457761.fastq.gz 304b46d332665e9baa316aeea31e42ee 65276109 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1201921 ERR3457762 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457762/ERR3457762.fastq.gz 381a243f7b0e9dae7d75bd8aa2f33af2 58274021 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1183241 ERR3457763 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457763/ERR3457763.fastq.gz 1a811097272601a82ca3d7d98d7653b5 57318218 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1310648 ERR3457764 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457764/ERR3457764.fastq.gz 2d0a369bf569305cb09961250f87264c 62465518 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1256112 ERR3457765 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457765/ERR3457765.fastq.gz 43ea0c3976163c1727aa9652ca93bf77 60551683 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 605854 ERR3457790 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457790/ERR3457790.fastq.gz 38443503ed52176bd2e3c28a8e696710 29031693 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 589799 ERR3457791 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457791/ERR3457791.fastq.gz 038c2603c4318005d0d87e18102d856b 28221828 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 659845 ERR3457792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457792/ERR3457792.fastq.gz 5fd897950b15c4d8a5761e4dae3b1091 30828488 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 633851 ERR3457793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457793/ERR3457793.fastq.gz 440122574ba583a3c84e541048fff22d 29672071 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 671126 ERR3457794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457794/ERR3457794.fastq.gz 845f0279eea69c7266d84b92f8fd808e 30059793 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 660314 ERR3457795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457795/ERR3457795.fastq.gz 34c5afaaf7f46e0df1fa2f54ac9a2f0d 29548916 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 670089 ERR3457796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457796/ERR3457796.fastq.gz b4c8394a2bfb62f4cd5c9729a5dbadd4 30933393 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 666990 ERR3457797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457797/ERR3457797.fastq.gz f8b68dc08234e8eed7c955c4a6ca5754 30703320 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 569657 ERR3457798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457798/ERR3457798.fastq.gz 4c94230871ebf030a787b0887c39480f 27515998 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 559103 ERR3457799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457799/ERR3457799.fastq.gz 1eb66f27dcebfa74c56ebbda3157a8c8 27009222 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 618055 ERR3457800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457800/ERR3457800.fastq.gz 36936d3daf372e9539980795394a585d 29380806 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 591511 ERR3457801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457801/ERR3457801.fastq.gz a1cdf1d92fd4974403a49834f9f40a06 28461052 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 726833 ERR3457802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457802/ERR3457802.fastq.gz 264c0227547a07c785c112ba5c779358 35022145 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 707353 ERR3457803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457803/ERR3457803.fastq.gz 6060128605efa92621d876fc6a6d3e74 34038006 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 788331 ERR3457804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457804/ERR3457804.fastq.gz 42c3f57e15d13cd04735c71c46c81343 37035504 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 759637 ERR3457805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457805/ERR3457805.fastq.gz 15bf09b439a409ea6541eaf27e6b90e2 35759778 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 800946 ERR3457806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457806/ERR3457806.fastq.gz dd878cda86f4838378bf94a79eb3e9d5 36059673 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 791157 ERR3457807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457807/ERR3457807.fastq.gz 2404404524f86b6c9a963af7d7faedf2 35597498 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 803871 ERR3457808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457808/ERR3457808.fastq.gz 939f69b2f4a332d4461b0c988dc1227a 37306500 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 799387 ERR3457809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457809/ERR3457809.fastq.gz 45e776d81712795751f0cb1d542e8c94 37007816 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 680579 ERR3457810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457810/ERR3457810.fastq.gz 4fcc8e9582453bf49cd102fa4d281f28 33072977 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 668661 ERR3457811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457811/ERR3457811.fastq.gz 5a97d7e2e6967e9f4e719ebfb02e61f6 32482785 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 739300 ERR3457812 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457812/ERR3457812.fastq.gz 539ebd7deb904ff6238d8b004dfd4536 35333507 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 709780 ERR3457813 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457813/ERR3457813.fastq.gz ebcff3f1c42a48ac22249315cc838762 34348260 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 455424 ERR3457778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457778/ERR3457778.fastq.gz f7ef55c7b622d4b0ca48c3d71510092a 21941623 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 444225 ERR3457779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457779/ERR3457779.fastq.gz 8937254e306630b8fb7e5a32df3084ae 21365066 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 493051 ERR3457780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457780/ERR3457780.fastq.gz 731357526e7d59011747a78e281503b4 23150202 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 474510 ERR3457781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457781/ERR3457781.fastq.gz 328b0a12d1057ee5745a8fe1faa2e5c6 22334993 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 500927 ERR3457782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457782/ERR3457782.fastq.gz a00f0456900da1f5c7fcd369951b8e0e 22541337 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 493615 ERR3457783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457783/ERR3457783.fastq.gz e03dd9ebf81bfeda181761f29f26e244 22205614 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 500400 ERR3457784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457784/ERR3457784.fastq.gz d17bb311acf8b601d655d3d01224ac2c 23215084 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 499717 ERR3457785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457785/ERR3457785.fastq.gz be24037436572f060a4e89edef002425 23111727 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 428138 ERR3457786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457786/ERR3457786.fastq.gz cbb61d1e31a5f6e0a28adc4b3aa0f284 20796568 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 419173 ERR3457787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457787/ERR3457787.fastq.gz 7b013192ce8a2c9d822ec1ba481a7bb2 20368331 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 462107 ERR3457788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457788/ERR3457788.fastq.gz 54a8c6033dcb10bea56351094d3973d8 22084287 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 442881 ERR3457789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457789/ERR3457789.fastq.gz e34518c74ccd9ca6224c7c0dfe247999 21425799 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 557966 ERR3457694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457694/ERR3457694.fastq.gz 3b067bafe0370e14704c4452cbb520e0 26967995 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 534096 ERR3457695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457695/ERR3457695.fastq.gz 246f41c82e403fe9ff0b9cdf8c969e3c 25765056 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 607810 ERR3457696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457696/ERR3457696.fastq.gz 0f49399349fd5258ef5440042b7d8cbe 28604700 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 575318 ERR3457697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457697/ERR3457697.fastq.gz 83f7b9522a7545834ec575246370a95d 27154314 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 645703 ERR3457698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457698/ERR3457698.fastq.gz 6f30cbd709cfcddb360744096b46df9b 29202953 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 608102 ERR3457699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457699/ERR3457699.fastq.gz f7e1b7749990a789fd5f66c950a25e88 27391976 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 644519 ERR3457700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457700/ERR3457700.fastq.gz 55fc2ae801737a37c2393759a4b12171 29984482 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 612462 ERR3457701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457701/ERR3457701.fastq.gz 9debd7cded3fa48613679b23e4adf647 28353603 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 518593 ERR3457702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457702/ERR3457702.fastq.gz fd1fca3132672ad2fc0386448804c6fa 25277921 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 501849 ERR3457703 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457703/ERR3457703.fastq.gz 3e732a343d79e207dffe9192cd599961 24459902 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 568355 ERR3457704 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457704/ERR3457704.fastq.gz a334932c3d11f4d9e4a204f8fa2617a7 27264765 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 533829 ERR3457705 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457705/ERR3457705.fastq.gz 2a6c12978c5d28f1dd92802343201d41 25905768 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 567973 ERR3457658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457658/ERR3457658.fastq.gz f8db405c49fa07a353b77e9171a4e91a 27475124 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 553277 ERR3457659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457659/ERR3457659.fastq.gz cb253ddbffbb4d829ee82c106f7bb490 26746189 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 619358 ERR3457660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457660/ERR3457660.fastq.gz 8573628d6d0470b99f0f37c61570cec3 29204725 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 596226 ERR3457661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457661/ERR3457661.fastq.gz a66c08321d68281e3e2c3edca3a47529 28229603 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 632664 ERR3457662 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457662/ERR3457662.fastq.gz 0321f18cdf33f531ff78422afde660f4 28607365 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 623243 ERR3457663 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457663/ERR3457663.fastq.gz ac442029b36a9a38b605c7e920fbc11d 28182104 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 627098 ERR3457664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457664/ERR3457664.fastq.gz 8f661245b9ad37053a914c8181514a3e 29172827 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 625365 ERR3457665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457665/ERR3457665.fastq.gz 02c2b8d4ebc1e81d97bd7c2fb5513c28 29034384 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 531963 ERR3457666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457666/ERR3457666.fastq.gz 7a2014a6b097a95981cd2bcaed7887d4 25959572 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521086 ERR3457667 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457667/ERR3457667.fastq.gz 86244304a1a60468f7016e1876eb2c96 25427052 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 578209 ERR3457668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457668/ERR3457668.fastq.gz f0f77996f465814589b9c72c7e3474d7 27781843 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 554191 ERR3457669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457669/ERR3457669.fastq.gz 770e8bf8aa80299114e4fd1607fd11d1 26974051 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 359706 ERR3457706 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457706/ERR3457706.fastq.gz b6c50a4993c0275c71d6ea1744845dec 17261087 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 349372 ERR3457707 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457707/ERR3457707.fastq.gz 08e98001426ea6735b93e3ea5bc6ea01 16737394 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 391610 ERR3457708 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457708/ERR3457708.fastq.gz 6da2a9f9a9bbd957d6964c09a1ec1e0d 18340989 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 375269 ERR3457709 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457709/ERR3457709.fastq.gz ca3b6420e2996fdd84da3fc76d1c239e 17606259 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 401474 ERR3457710 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457710/ERR3457710.fastq.gz cd7b70bfccb612aef6417808d63f8e3d 18016402 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 395307 ERR3457711 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457711/ERR3457711.fastq.gz 134ef6f391f073a9af9264b32ec30f65 17711702 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 401614 ERR3457712 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457712/ERR3457712.fastq.gz ea554321c8328f704deb864ae2dd3fac 18575785 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 397728 ERR3457713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457713/ERR3457713.fastq.gz d74c91d394dc2a735e9e84faa1165da2 18340010 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337062 ERR3457714 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457714/ERR3457714.fastq.gz 61d891ed6b1097c9c1413e69640b1ebb 16278711 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330098 ERR3457715 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457715/ERR3457715.fastq.gz e8a3d4a7455ee5725a22ea5b088c3276 15948085 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 367631 ERR3457716 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457716/ERR3457716.fastq.gz 22a6cae2210ae2a575351433b661380a 17488707 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 349898 ERR3457717 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457717/ERR3457717.fastq.gz 576c2fafb07b4faaf8f7394b9191b1ef 16848642 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 477351 ERR3457742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457742/ERR3457742.fastq.gz f9a752d9021484b9d43818ed389516f8 22791644 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 465913 ERR3457743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457743/ERR3457743.fastq.gz 81b24f5d4108c172aa5c55c6d4ec6523 22225329 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521453 ERR3457744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457744/ERR3457744.fastq.gz 60bf32a4a524a583e82094b6b8682e18 24289527 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 498940 ERR3457745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457745/ERR3457745.fastq.gz ac32c204ef998052fc3ad3f89a5d52ba 23331900 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 530434 ERR3457746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457746/ERR3457746.fastq.gz 340e75f8bc6998fee1aa6b56a30c45c1 23702765 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 523423 ERR3457747 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457747/ERR3457747.fastq.gz 7e575b621f2317efe330a1462bef3ddc 23373204 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 529697 ERR3457748 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457748/ERR3457748.fastq.gz c2d59211245d9e86ba36f86c8b67d16c 24385696 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 526711 ERR3457749 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457749/ERR3457749.fastq.gz fbda556f0410edbc5dfd99fb79f712c8 24227164 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 450625 ERR3457750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457750/ERR3457750.fastq.gz b66fe98494b80fb4e860a31091af0651 21683784 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 441927 ERR3457751 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457751/ERR3457751.fastq.gz ecc806d5c4c9555ef37b1d8fade1cdcb 21276944 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 488978 ERR3457752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457752/ERR3457752.fastq.gz 48dbb5d6d3227693826528678a4bfec6 23169083 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 467322 ERR3457753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457753/ERR3457753.fastq.gz 6e125b1eec2dcee48cff5aaf94553835 22435618 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 754291 ERR3457718 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457718/ERR3457718.fastq.gz 96cd73bc82a99e720340e7c6c4f2e606 36093893 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 730495 ERR3457719 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457719/ERR3457719.fastq.gz c180af90f485baed0bd029b8c75c2bb0 34921722 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 817427 ERR3457720 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457720/ERR3457720.fastq.gz f5e3fe96c5a6f10617aba915cf4030a5 38115936 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 784701 ERR3457721 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457721/ERR3457721.fastq.gz e258ffd2e9d8a6834b06f1610c308319 36730890 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 837373 ERR3457722 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457722/ERR3457722.fastq.gz 87918de9e77d2ebb3b3048a93e25d354 37470792 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 823846 ERR3457723 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457723/ERR3457723.fastq.gz 08b23a31979e8b274bec6a75e8508ac3 36843920 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 832102 ERR3457724 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457724/ERR3457724.fastq.gz 0c4c6dd9acfe51f91475b803abc0c27c 38311731 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 824630 ERR3457725 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457725/ERR3457725.fastq.gz 3ac0e1e6cf1f2a94700294326dd558b3 37891463 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 703586 ERR3457726 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457726/ERR3457726.fastq.gz ca51ad7479c2b3460bc17ca0b966bb6a 33977702 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 687040 ERR3457727 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457727/ERR3457727.fastq.gz 8d08402ed2f9848c4d3c4507e8cc1e38 33188197 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 765729 ERR3457728 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457728/ERR3457728.fastq.gz 134baca4d4f79bebad224d8033dcd464 36382554 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 730179 ERR3457729 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457729/ERR3457729.fastq.gz 3147ca3175695b3ff28e0f9e66f20843 35140567 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 574992 ERR3457670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457670/ERR3457670.fastq.gz 7d33ca8dea772de6bdcf21b259865218 27925169 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 558785 ERR3457671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457671/ERR3457671.fastq.gz d6837999e242921dd78fbfebdb30dc45 27124549 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 632911 ERR3457672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457672/ERR3457672.fastq.gz 977640296a02c03baa586926689de08f 29984263 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 603962 ERR3457673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457673/ERR3457673.fastq.gz 4f35f7ca325adf4de9930f3eb3e3cd07 28728146 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 653089 ERR3457674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457674/ERR3457674.fastq.gz 41b4868644012cfb3d578ec0ef570c08 29630820 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 642499 ERR3457675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457675/ERR3457675.fastq.gz 3b94f9cb0e81430761d895ff6dedb8bd 29135378 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 640914 ERR3457676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457676/ERR3457676.fastq.gz 7d324b40b468ba8568fafb77d3ddf4b6 29907961 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 634207 ERR3457677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457677/ERR3457677.fastq.gz c8176e3c2d0ffdfa2f20e158f974a025 29546842 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 540006 ERR3457678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457678/ERR3457678.fastq.gz f0ef5b28960f1e1d58773331819ba599 26418191 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 526548 ERR3457679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457679/ERR3457679.fastq.gz 882268e26df1555609dee6c3c4a45f43 25767222 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 591056 ERR3457680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457680/ERR3457680.fastq.gz cffed17f9c00c23f8f06676aeab6cff6 28486477 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 561619 ERR3457681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457681/ERR3457681.fastq.gz 758282c62a416ab45291709ced0d4b25 27429800 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 335690 ERR3457826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457826/ERR3457826.fastq.gz 39363ec6373ef6f70cce7d2382ffa324 16136242 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 327101 ERR3457827 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457827/ERR3457827.fastq.gz 6c1c6d73b9834451952d560dbb3e2628 15691420 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 364532 ERR3457828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457828/ERR3457828.fastq.gz 86e6c20aa6de733f258ffc23187073ad 17093451 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 351040 ERR3457829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457829/ERR3457829.fastq.gz aba8efbac87b7dd4b23aa451f0729980 16486132 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372790 ERR3457830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457830/ERR3457830.fastq.gz 0adcd22529e371204eb6e441d2b027e7 16742897 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 368062 ERR3457831 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457831/ERR3457831.fastq.gz c8df8a12104b95ced6a617c859403046 16511454 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 374480 ERR3457832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457832/ERR3457832.fastq.gz e5ecac5b4c3989f4c14a19c1754c750a 17353705 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372939 ERR3457833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457833/ERR3457833.fastq.gz 3e76329e5a4c9b43e041460288a40be0 17231604 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316566 ERR3457834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457834/ERR3457834.fastq.gz 936e8644fb76f1e9060f3f2e96d52800 15333470 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 310855 ERR3457835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457835/ERR3457835.fastq.gz 1b65668d40fe802822bdf889ed538b19 15037058 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 344642 ERR3457836 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457836/ERR3457836.fastq.gz 6fb5cb3d5c2f9f43ef3b9680419df843 16422348 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330753 ERR3457837 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457837/ERR3457837.fastq.gz 33db1480cb1ce541649e8b3fc65e58cb 15948256 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 260915 ERR3457814 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457814/ERR3457814.fastq.gz 8ec933c7b25c4825f4baef89769dadad 12522978 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 254942 ERR3457815 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457815/ERR3457815.fastq.gz ce1d7433b9cb4bf253201a2b78a468a7 12202681 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 285269 ERR3457816 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457816/ERR3457816.fastq.gz ed3ef7fa43041c5984c68a0929da11b3 13382226 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 273144 ERR3457817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457817/ERR3457817.fastq.gz aee20704e93e6b4e9eece86f3efce7cc 12820332 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 293781 ERR3457818 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457818/ERR3457818.fastq.gz 74b19ae63de3ea2fd5ec3fd4f29bf6f6 13205705 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289290 ERR3457819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457819/ERR3457819.fastq.gz d7c8385835b0724a7c10cb082648add9 12977265 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 297413 ERR3457820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457820/ERR3457820.fastq.gz bb963996de88c594efe9b882e749c49f 13773878 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 293194 ERR3457821 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457821/ERR3457821.fastq.gz 58ae23e57c8c909ab4d694d0fa5c43e4 13559838 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 247251 ERR3457822 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457822/ERR3457822.fastq.gz 093b46667e54f259413c7d9b25d4e36f 11922095 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 243833 ERR3457823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457823/ERR3457823.fastq.gz ee7394f0a80195a7b77406d3817a3fc5 11740149 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 270050 ERR3457824 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457824/ERR3457824.fastq.gz dce35a666497c9cfc52df6b44d258b53 12808436 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 259085 ERR3457825 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457825/ERR3457825.fastq.gz 37798d681e872d42877cf075ba61d8a1 12428481 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 300859 ERR3457682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457682/ERR3457682.fastq.gz 2362ca77d9a9ffc9b54ab2920095129b 14452520 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 292790 ERR3457683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457683/ERR3457683.fastq.gz 0a679bc28cae63fa46bea8da14eb08ff 14057520 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 325964 ERR3457684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457684/ERR3457684.fastq.gz a8ed34e1ae79eba3dc1401e647b08ecc 15313881 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 314435 ERR3457685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457685/ERR3457685.fastq.gz 4d0d7014ba39cf2ff279c005175c147f 14797828 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332625 ERR3457686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457686/ERR3457686.fastq.gz 01e6e75ed4bdcb8bb340614c70c4aef2 14959257 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 328783 ERR3457687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457687/ERR3457687.fastq.gz 91240d861eb171b8efa1c11745a985eb 14780303 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 335614 ERR3457688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457688/ERR3457688.fastq.gz af6d7e9894d0401908cc600ae7cfeab8 15577609 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332543 ERR3457689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457689/ERR3457689.fastq.gz f60cc7f0069ec380f41dc5f9b044c0bc 15403163 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284733 ERR3457690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457690/ERR3457690.fastq.gz bf3c3a1b9864bee3c06e2f7e88a5fe00 13764684 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 278928 ERR3457691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457691/ERR3457691.fastq.gz 628094d1df246582924cb138e9bff362 13491712 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 307653 ERR3457692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457692/ERR3457692.fastq.gz 054d5a288e513d6e59e59b960a36e548 14641575 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 296064 ERR3457693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457693/ERR3457693.fastq.gz 86f6f62f51e8c16c951ac2e1c23bfb97 14264198 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 453763 ERR3457766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457766/ERR3457766.fastq.gz 5c380b425df9ffa88e8f4c57b3e538e2 21714956 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 441861 ERR3457767 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457767/ERR3457767.fastq.gz b567375ba0d4a78c7f0e3ba0e6235e1a 21118359 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 490730 ERR3457768 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457768/ERR3457768.fastq.gz eb278a4293c67042e7094ccefd03a1e3 22953410 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 471801 ERR3457769 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457769/ERR3457769.fastq.gz 2f390ec93f8a8810955c3100bdcd0cd2 22079678 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 506432 ERR3457770 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457770/ERR3457770.fastq.gz fc317d98da30018ef4ece39e681d5459 22683712 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 495072 ERR3457771 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457771/ERR3457771.fastq.gz f0451e172a05fd3221e5128d1cc9d11b 22140292 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 508434 ERR3457772 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457772/ERR3457772.fastq.gz fa1eed9c5eb991db9701cfdd06ea12d5 23480149 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 502028 ERR3457773 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457773/ERR3457773.fastq.gz 04c07078d7a25a8fa6dc231b616e1bc6 23128376 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 428650 ERR3457774 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457774/ERR3457774.fastq.gz 5011be6fccde4a10b068d1cb61b7ef94 20651590 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 418255 ERR3457775 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457775/ERR3457775.fastq.gz 9852653cbcd131ceeb379004385582cd 20142817 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 465812 ERR3457776 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457776/ERR3457776.fastq.gz 6ee63621fb773a01cff96cba168e01df 22074528 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 444563 ERR3457777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457777/ERR3457777.fastq.gz d80b69acc9657b6d4430f023dbb21c52 21316884 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 460187 ERR3457730 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457730/ERR3457730.fastq.gz 08e0fc7982676572c98205312f30b6b9 22532028 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 448267 ERR3457731 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457731/ERR3457731.fastq.gz 7c63d38f3bfb43ca68b72ef3b84d9472 21910963 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 498273 ERR3457732 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457732/ERR3457732.fastq.gz bed8034100ebf5a843a3c580f964b228 23835910 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 481149 ERR3457733 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457733/ERR3457733.fastq.gz a883207cf80d2da3de6c651b50e73d6f 23049916 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 515079 ERR3457734 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457734/ERR3457734.fastq.gz 86014b253def3dd3f5c546521fe1c89e 23602604 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 508546 ERR3457735 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457735/ERR3457735.fastq.gz 9fc19e66eb20302f43ea8e1688f6161f 23267512 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 516578 ERR3457736 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457736/ERR3457736.fastq.gz 2add7a5dddc07fc53e8af8617ad7c24d 24382261 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 512230 ERR3457737 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457737/ERR3457737.fastq.gz 3abe50ba762ba6de296271ec87a6f994 24103290 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 434684 ERR3457738 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457738/ERR3457738.fastq.gz cfefef611e5b634304169379b77b5f6e 21442970 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 427474 ERR3457739 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457739/ERR3457739.fastq.gz 12940a6ce198e3fc66524195e81752e8 21056180 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 473398 ERR3457740 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457740/ERR3457740.fastq.gz 614d51ec5673ca403c4ebaf66650680e 22969691 -Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 455136 ERR3457741 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457741/ERR3457741.fastq.gz d7735be06a21aba3d7b1fa9ab06b3c59 22337698 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4947990 ERR3457838 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457838/ERR3457838.fastq.gz d42e11d9d7441c0d338526e873e13bf0 168635970 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4955872 ERR3457839 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457839/ERR3457839.fastq.gz 9c320908960b1cc5b990556d27d1160f 168298220 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1114649 ERR3457840 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457840/ERR3457840.fastq.gz e368bb7f55af8ce8e095bc5b63eec64f 38988711 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5685939 ERR3457841 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457841/ERR3457841.fastq.gz 539a0e0e0aa1b084e57dc8e9e020afb5 191642913 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5699114 ERR3457842 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457842/ERR3457842.fastq.gz 750751d796d458295f99469606546532 191405341 -Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1245862 ERR3457843 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457843/ERR3457843.fastq.gz 3076aec03a7bc33edb107fe18d4e9d0d 42908237 -Devault2017 2017 10.7554/eLife.20983 Nod1 SRA PRJNA352376 SRS1779841 Nod1-1h-UDG double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 1500 PAIRED WGS 32230769 SRR4885940 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/000/SRR4885940/SRR4885940_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/000/SRR4885940/SRR4885940_2.fastq.gz 3d93b3fd502505a44a5366c3b548d2c0;b3e7625e7b246021caf4d57a65b9a7ac 1917046256;1907442841 -Devault2017 2017 10.7554/eLife.20983 Nod1 SRA PRJNA352376 SRS1779840 Nod1-1h-nonU double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 1500 PAIRED WGS 840160 SRR4885939 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/009/SRR4885939/SRR4885939_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/009/SRR4885939/SRR4885939_2.fastq.gz ba74e9ffcf638552d48343f77c2d7dea;cbfb6c22e233d52d552225ba3f3083cb 51602580;50923478 -Devault2017 2017 10.7554/eLife.20983 Nod2 SRA PRJNA352376 SRS1779846 Nod2_UDG double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 1500 PAIRED WGS 6483539 SRR4885944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/004/SRR4885944/SRR4885944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/004/SRR4885944/SRR4885944_2.fastq.gz b823f570011beb8dfd808e7abb426c20;1929bf1d8d978c63d6bdd4a092c628e1 399224179;403258015 -Devault2017 2017 10.7554/eLife.20983 Nod2 SRA PRJNA352376 SRS1779844 Nod2_nonU double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 1500 PAIRED WGS 728551 SRR4885943 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/003/SRR4885943/SRR4885943_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/003/SRR4885943/SRR4885943_2.fastq.gz 053e7a8ba50209f43f8686c3a633f9bc;4e412d1148aee81dfb25cbb0c49cec6a 45708355;46088875 -Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 4732059 SRR6233936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR623/006/SRR6233936/SRR6233936_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR623/006/SRR6233936/SRR6233936_2.fastq.gz e8cc2e92d207fb19e490d21aec0fd6d4;2dae917abe1b738048a4b75e82dbf116 483224989;469619656 -Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 34322764 SRR847036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847036/SRR847036_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847036/SRR847036_2.fastq.gz 2b08221844d21c51e5cbac343ed53b33;8a63d71e6e597856c7eb961d4dff727f 2230651734;2235547148 -Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 2705832 SRR847064 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847064/SRR847064_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847064/SRR847064_2.fastq.gz b68a4d87046e8b2f71685d60f8cd525c;d2e7fa8b03fd204c77c0eef97dcb609f 272834435;271423932 -Schuenemann2013 2013 10.1126/science.1238286 3077 SRA PRJNA200950 SRS418834 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 6029646 SRR847038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847038/SRR847038_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847038/SRR847038_2.fastq.gz c7f4afe2ce16e0a5ed0914e3f87bf3fe;6febef9156f22a43e03a38fa57f61f0e 358983105;357900019 -Schuenemann2013 2013 10.1126/science.1238286 3077 SRA PRJNA200950 SRS418834 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 1248819 SRR847039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847039/SRR847039_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847039/SRR847039_2.fastq.gz a02b76b36e373e3ad75cd8756b642a51;9963f2312c4b5993afc5fe8909f3690b 127011694;121289887 -Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 6751711 SRR847050 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847050/SRR847050_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847050/SRR847050_2.fastq.gz 746573e0c9ea6891648b68ec6bc7cdd4;27f1ee15d57f7093f5476eefd7a4d6c4 745159863;732559016 -Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 3135120 SRR847051 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847051/SRR847051_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847051/SRR847051_2.fastq.gz bbade4f6a68c7443d9b6796ba5818f91;64276958d4c32282eed3feafff8a80cf 308505941;311503998 -Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 15101591 SRR847052 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847052/SRR847052_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847052/SRR847052_2.fastq.gz aa344403a2d45f0f2efd0c16f6dd84ea;d98e6a7731d856ae65e9ae3dc32fe236 1955448250;2141400735 -Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS419262 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina HiSeq 2000 PAIRED Unknown 42303966 SRR847702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847702/SRR847702_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847702/SRR847702_2.fastq.gz 2c5b2ed84194b342a1717a79acc5c24c;3fef02d1130eca7b7da4de7d7f0b3f12 3536313137;3672101405 -Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418858 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 39915365 SRR847056 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847056/SRR847056_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847056/SRR847056_2.fastq.gz e6e40001a238667d03a757225438c8e3;90474cb8fcbfe35c08f2ff100eedec8d 2472497908;2598198443 -Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418858 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 475522 SRR847057 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847057/SRR847057_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847057/SRR847057_2.fastq.gz 4ca488a5dbd2d656e84f147cb9ffaf06;3efcc973b5194d04853e7cf048b1f7c8 51170667;52124042 -Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418859 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 156781 SRR847058 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847058/SRR847058_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847058/SRR847058_2.fastq.gz 265a9172d8e44f33c3b967f7bae1fe3b;20d54dc3538fdd1508a0036b3f673ec1 15944896;15484326 -Schuenemann2013 2013 10.1126/science.1238286 SK2 SRA PRJNA200950 SRS418843 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina HiSeq 2000 PAIRED Unknown 54243849 SRR847034 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847034/SRR847034_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847034/SRR847034_2.fastq.gz e01efceb030fda4914f05accb3b269c1;6803dda5c2bc13075ecbf0b5bd1e7472 3973365718;4085569371 -Schuenemann2013 2013 10.1126/science.1238286 SK8 SRA PRJNA200950 SRS418845 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 9898159 SRR847069 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847069/SRR847069_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847069/SRR847069_2.fastq.gz 346237b054109fcdc1c7933cfb456237;f41c1f7c32bcfbb1a7be18a1290e8eb2 638952868;663649548 -Schuenemann2013 2013 10.1126/science.1238286 SK8 SRA PRJNA200950 SRS418845 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 243431 SRR847070 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847070/SRR847070_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847070/SRR847070_2.fastq.gz d1bfda82096b4e463b85dd7c3faa8644;903899d009a584204024d90584c5b77f 24758187;24245805 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 158509921 ERR2112553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112553/ERR2112553_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112553/ERR2112553_2.fastq.gz 6a43ccac3bc9f0b3f4f68bc1af728ad2;2c6f9bad6f17039d003a9f22a10ab225 4721536987;5204650270 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 160074003 ERR2112554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112554/ERR2112554_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112554/ERR2112554_2.fastq.gz 6e5b53f0c27cc4fb842ff1f19177fad3;a5e0160fcb4b0fe8e5e6637f20225e97 4779315428;5036417534 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 161480280 ERR2112555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112555/ERR2112555_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112555/ERR2112555_2.fastq.gz 4b127200fb4ae76efa1b78956e614510;4a740135d88f6c372a2c9fcb42cde5c2 4789085254;5041070343 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 160633252 ERR2112556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112556/ERR2112556_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112556/ERR2112556_2.fastq.gz 788bc1dacc6f1f0d28e395f220347af5;1626be306c67f3d232fc6615de4eee97 4762450582;4951034593 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164273153 ERR2112557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112557/ERR2112557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112557/ERR2112557_2.fastq.gz 1adb60e4ddb754c8d4ede388ff407e9f;3c6951cbf08d4d42c5f8ecc9cad9b697 4806203917;5006147821 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164731231 ERR2112558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112558/ERR2112558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112558/ERR2112558_2.fastq.gz e6878955f80155cf2e1deb4c0dd81f02;383b725be9cd7ca80602747bb186b4e6 4800425824;4986729224 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164966026 ERR2112559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112559/ERR2112559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112559/ERR2112559_2.fastq.gz d8aa7d5b71f2d386bb4c57a5ee08d4bb;cbb28b0906af2808eec919278257f23a 4808191942;4980287102 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 163136299 ERR2112560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112560/ERR2112560_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112560/ERR2112560_2.fastq.gz 7e2276f7a32f152e14864436ed98f4ea;2dbce83007d88bcca85aaa155a39bb8d 4748817702;5037568653 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165156375 ERR2112561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112561/ERR2112561_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112561/ERR2112561_2.fastq.gz 2019dca04801b17bead6651b3c9808b5;e27a3690e6048f068d8f6a2c33607f06 4763628506;5013978383 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164650794 ERR2112562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112562/ERR2112562_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112562/ERR2112562_2.fastq.gz 992e6fec435b812ff36f1f7855442ff3;e6f8834ef56caebebf4ae2f7ab5b8b44 4788084473;5094567380 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164721106 ERR2112563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112563/ERR2112563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112563/ERR2112563_2.fastq.gz fa85a61cf62b9a42acda74a98c3f5df3;48094f522349854fbebaafced3876e68 4800164197;4997400031 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 166025787 ERR2112564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112564/ERR2112564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112564/ERR2112564_2.fastq.gz e776a3a475e3eee63e086257e8a02512;bb320b3e8266542645e8f77bb59d3c09 4820737999;5020130667 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164103159 ERR2112565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112565/ERR2112565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112565/ERR2112565_2.fastq.gz 324a8db6548abf52aa23920a98d84bf5;37659fecedda363d284252267e916cc3 4778503496;5018805843 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165644849 ERR2112566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112566/ERR2112566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112566/ERR2112566_2.fastq.gz 915381af249dc612dc7c37deafb26fff;280be74e57759d7b12dc96192a1bf308 4830457040;5068900566 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164604834 ERR2112567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112567/ERR2112567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112567/ERR2112567_2.fastq.gz 53c40a90ae18a27f9c5d65fe2dd1e545;5795d9e4d24f233084709ac17741a09b 4851693358;5066759901 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165528233 ERR2112568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112568/ERR2112568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112568/ERR2112568_2.fastq.gz 144acf0766a776abeabf77e16e7c4399;d9288097ae27597bb817e8afe64b9e63 4864119549;5075657317 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 372094536 ERR2112583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112583/ERR2112583.fastq.gz cc3f78fa18391db558edf8718cc0d032 12980680823 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5794527 ERR2112584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112584/ERR2112584.fastq.gz 243fb7252669fd8506f12672bfb7be99 192305264 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5802479 ERR2112585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112585/ERR2112585.fastq.gz 712647b96f01764cd137add9d6e05ad5 191903848 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1256993 ERR2112586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112586/ERR2112586.fastq.gz 456940c48c1bf831fb6ad37c181e683d 42608192 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8144554 ERR2112579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112579/ERR2112579.fastq.gz 805aefa171f5f931fbe2b543c6fde5c2 279961652 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7177264 ERR2112580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112580/ERR2112580.fastq.gz 3bbb18b723711d01fee6e6c6ab5c5bfe 243429825 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7204521 ERR2112581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112581/ERR2112581.fastq.gz 9e8752500e61c0983393249c7f12c272 243578581 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1578552 ERR2112582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112582/ERR2112582.fastq.gz 875e4f45d778887d0193a641e67944c5 54940438 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 501935486 ERR2112544 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112544/ERR2112544_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112544/ERR2112544_2.fastq.gz 2855e888c9952a3ac54c5ea432788498;db8210ab13a896579682f2ba98efa81e 17699922375;18605175825 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 344982990 ERR2112545 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112545/ERR2112545_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112545/ERR2112545_2.fastq.gz 1a23abc7240499da06b1b622656ca9fc;527debf32a5ee6bcd251fe6be5d51c99 13583750169;14910826161 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 357799530 ERR2112546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112546/ERR2112546_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112546/ERR2112546_2.fastq.gz 90219ed959b1c1db1c2987bc42e7949e;43b39295b8468d381e1cba524d570d5e 13656425987;15202466103 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 KunilaII ENA PRJEB19335 ERS1892065 ABI843 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 120252973 ERR2112547 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112547/ERR2112547_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112547/ERR2112547_2.fastq.gz 35dbbd41d04e16797c422373f72740c8;aa505813d4e4b98e5ebaee364264eb9d 5893549111;7424869213 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 KunilaII ENA PRJEB19335 ERS1892065 ABI843 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED WGS 326822431 ERR2112548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112548/ERR2112548_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112548/ERR2112548_2.fastq.gz 9ecc8c56c17e3b8d23da57ae66069544;d16d7917277312702f4cac28cf961a82 13072972361;14740293890 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 318125040 ERR2112574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112574/ERR2112574.fastq.gz d29e8511b8c860889920240560f28963 11592228429 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320155752 ERR2112575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112575/ERR2112575.fastq.gz 1c3931ef9c7b3198fd89eed4c4af79aa 11523747356 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320577112 ERR2112576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112576/ERR2112576.fastq.gz c01e8e624b5e7e542a6a53060eda2963 11612997118 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 286756923 ERR2112577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112577/ERR2112577.fastq.gz 1b43fd6bdd9e0f372e0370426e502ae9 10175356811 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 165092355 ERR2112578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112578/ERR2112578.fastq.gz a546c8d02e34ab7ba9bf9b9b70edc110 6042098938 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 60086789 ERR2112549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112549/ERR2112549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112549/ERR2112549_2.fastq.gz 73e9401de765e9b63fe1370747dd75ba;19b46ab79d451b77e49cb404fd5d8d0c 3392780292;3402358327 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 91041105 ERR2112550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112550/ERR2112550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112550/ERR2112550_2.fastq.gz 30f0220ef11e032446557140f86b9309;7387ffbd1b1eeab20ad9947911b40f6a 5140424969;5269817111 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 69843225 ERR2112551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112551/ERR2112551_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112551/ERR2112551_2.fastq.gz 53e71e1b8bf186492ea9fb82fa1a4ae2;b8209a119dcb2e3221b85d18536d2981 3934275355;3954595191 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 102092884 ERR2112552 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112552/ERR2112552_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112552/ERR2112552_2.fastq.gz 48bb523817b5d18abedabc1cf9d0d7fa;f4b0a983a75459cbbb3aede659f11e1b 5682086307;5838030860 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50735294 ERR2112569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112569/ERR2112569.fastq.gz 665a95de7619e2ef8c8cbe7e34188012 1810848448 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50329730 ERR2112570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112570/ERR2112570.fastq.gz 3b81d52c424c4850f8d2dc89999eb81d 1776169803 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50167481 ERR2112571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112571/ERR2112571.fastq.gz 74b5a8159f69a45baa182f2d522f0eac 1776435603 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 61241463 ERR2112572 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112572/ERR2112572.fastq.gz 73620883117477e8fc1ab19aedf85495 2112670160 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 28754842 ERR2112573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112573/ERR2112573.fastq.gz 6c3a2221ce1a99a4720dfd88bc88b0c5 1035185109 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 708541536 ERR6196168 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR619/008/ERR6196168/ERR6196168_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR619/008/ERR6196168/ERR6196168_2.fastq.gz a634e37e81c524f46a903cd9cc8cf791;d24b4ef2cdad5c2fc6bd91f2de590739 12886301526;14778951646 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED Unknown 708541536 ERR6209525 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR620/005/ERR6209525/ERR6209525_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR620/005/ERR6209525/ERR6209525_2.fastq.gz 2d643578d6b1eeab646740f71bfb491c;f277c41dfaa18b1aed28d8f1e2106ff5 12886262371;14778846247 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 627617676 ERR6367013 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR636/003/ERR6367013/ERR6367013_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR636/003/ERR6367013/ERR6367013_2.fastq.gz 9ea339fda87952d662fda0f76cea1743;f6abdf72d16cc6b6405d712288a34401 13040324864;14947842915 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 306366670 ERR6379063 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR637/003/ERR6379063/ERR6379063_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR637/003/ERR6379063/ERR6379063_2.fastq.gz bc50b7156460d85e4a0fa81209cb3106;861a61a42eb1d1cbfc22d65a3f2c2788 6536666076;6861879346 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 305538770 ERR6394580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR639/000/ERR6394580/ERR6394580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR639/000/ERR6394580/ERR6394580_2.fastq.gz 23e97d9bfa76081650331e0db5669743;7de7d63cad46f7daa5ab271629be598a 6537395350;6853695120 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 598197958 ERR6412219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR641/009/ERR6412219/ERR6412219.fastq.gz 5eccdb437be25188ae73713697200b81 24891897642 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 598197958 ERR6447533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6447533/ERR6447533.fastq.gz b1b70500cebe312e0fb46acdc0216991 27931103130 -Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 15713148 ERR6449173 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6449173/ERR6449173_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6449173/ERR6449173_2.fastq.gz 78e84e49a49e5c6e721ee1dc07af3bdc;bc3d861c5c2e7d1a7ce8281c2f85d825 306809833;315963092 -Feldman2016 2016 10.1093/molbev/msw170 AE1175 ENA PRJEB14851 ERS1266114 AE1175_L2 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 56536550 ERR1546642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/002/ERR1546642/ERR1546642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/002/ERR1546642/ERR1546642_2.fastq.gz b58628ae236b11bac77059e16d00b371;1900f8577b51533aab80d796754aa519 4492575976;4402503242 -Feldman2016 2016 10.1093/molbev/msw170 AE1175 ENA PRJEB14851 ERS1266114 AE1175_L3 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 10816140 ERR1546643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/003/ERR1546643/ERR1546643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/003/ERR1546643/ERR1546643_2.fastq.gz 5b4f5f731b4b6bc98ff1bd26f555053e;af6c1930b518b5167baeaaeaf37ae88a 770141622;723655879 -Kerudin2019 2019 10.1016/j.jas.2019.105035 C21 ENA PRJEB35037 ERS3908875 Chichester21T double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 137177 ERR3611144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144_2.fastq.gz e63286c52160b9638d711d27dd220e49;71c61b150027588a18655d616e3dad18;73187fc796c1b18846370e5ca8617ea2 8278819;2161397;2440703 -Kerudin2019 2019 10.1016/j.jas.2019.105035 C48 ENA PRJEB35037 ERS3908876 Chichester48T double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 131530 ERR3611145 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145_2.fastq.gz 82da0f58c160d25d559416aca9983703;e727af3eeaf821bf850583c2e09f7f64;778f6488419b646bab6e96468a4c0b58 8924663;1282793;1383563 -Kerudin2019 2019 10.1016/j.jas.2019.105035 R5046 ENA PRJEB35037 ERS3908877 Raunds5046F double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 379967 ERR3611146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146_2.fastq.gz f56a6319e1e8917ca7ea909cd1c9ddc0;d3d929c9cc49c9f18b5f8e1774d7a287;27a6af0cfde260b1f9a140108cc49671 23944067;3467167;3959680 -Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ001 ENA PRJEB37007 ERS4540520 GLZ001.A0101.YP2 double PfuTurbo DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12895859 ERR4093959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093959/ERR4093959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093959/ERR4093959_2.fastq.gz bc902e54760c4cfe0400bd13d3fa2e1e;d23402bcf68b269db110ab8a1785dc9b 484295284;501742347 -Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ001 ENA PRJEB37007 ERS4540520 GLZ001.A0102.YP2 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13693524 ERR4093960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093960/ERR4093960_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093960/ERR4093960_2.fastq.gz d6f8daa30d25bdcd628afa8b4fcec640;61e8a31852d8d2d90da72471be4d6184 505472902;552271657 -Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ002 ENA PRJEB37007 ERS4540521 GLZ001.A0101.YP2 double PfuTurbo DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12991164 ERR4093961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093961/ERR4093961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093961/ERR4093961_2.fastq.gz 807c6213c3781b560528590f7499d308;73193cd0d91122a922d568ca14946599 475366612;505331466 -Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ002 ENA PRJEB37007 ERS4540521 GLZ001.A0102.YP2 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12340868 ERR4093962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093962/ERR4093962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093962/ERR4093962_2.fastq.gz 3a2b7ac47669f69dd02a1870a7f6dc1e;d5c4d3855c5eaebfe262dd7b74e57118 456223751;490811953 -DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278128 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 81552922 ERR3858142 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/002/ERR3858142/ERR3858142_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/002/ERR3858142/ERR3858142_2.fastq.gz 614e2b127dfe9a2faa50a459a7690226;470266570e9accfc4055ee986db60dca 4216623837;4258580020 -DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278129 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 97706805 ERR3858143 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/003/ERR3858143/ERR3858143_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/003/ERR3858143/ERR3858143_2.fastq.gz cc74ced2cb759ef6acb3774e18220eb1;8cb95351b9f49b474b8cb89585a1544a 4987214060;5530899781 -DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278130 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 99614047 ERR3858144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/004/ERR3858144/ERR3858144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/004/ERR3858144/ERR3858144_2.fastq.gz 78775be579ad9ff166e864b895736cb5;1a91930c2add78c4a0076bbe4d715e31 5049303131;5502651070 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150872.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 15956463 ERR1883928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883928/ERR1883928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883928/ERR1883928_2.fastq.gz 5d6d95bed802ff3a46295f032e35df47;adb0898be830555159a79e553cb4b08f 1391406808;1437292203 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 19353079 ERR1883929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883929/ERR1883929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883929/ERR1883929_2.fastq.gz 4b9811b6a2b134b139cd25a42971566a;3bbe6c9444237856e0fd8bf25a1a461a 1698695187;1765092754 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150872.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 16336144 ERR1883976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883976/ERR1883976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883976/ERR1883976_2.fastq.gz 96eebdccb0204a1677086f8dd258d2e0;e39ef137dfcece10c41388a1b4876c75 1161460735;1339350380 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12237291 ERR1883977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883977/ERR1883977_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883977/ERR1883977_2.fastq.gz a8f618be2def88cf8bfe3e18f1a038cd;8ca29d3f9b430372e032514289125b8b 901184997;1065492381 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 106756421 ERR1884147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884147/ERR1884147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884147/ERR1884147_2.fastq.gz 8b2c3b62df5c58d176a34a1e24de3c4e;3071ca2553f9e8ca0c498c3fc47629e3 4214581205;4667187792 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 218089079 ERR1884148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884148/ERR1884148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884148/ERR1884148_2.fastq.gz 813412ce27b4893d417935b75ef9c2c3;5dc8d489fe888328bffd597dbc1b224f 8641499110;9514599588 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 9128738 ERR1883912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883912/ERR1883912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883912/ERR1883912_2.fastq.gz 739e7f82a153e282d087b12116de9a48;b496490c44ab84ae2d287ae98006f394 847958546;866196709 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 68163457 ERR1884135 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1884135/ERR1884135_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1884135/ERR1884135_2.fastq.gz ff87eda3180c297e40b567b6490bc54c;76956c0f81e9d3513413ca444c31f20a 2823525865;3156861162 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 136213207 ERR1884136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884136/ERR1884136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884136/ERR1884136_2.fastq.gz 075fbb46900f5e479065743cfb161b81;8671d373bd0d8d18232620d0d6a48ee8 5663969989;6314971511 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6028531 ERR1884178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884178/ERR1884178_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884178/ERR1884178_2.fastq.gz b23acd6a7ad31112da58075b87e0e2d9;c9394eecbb8e13892896772921ba0de4 233179675;248355800 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 5960528 ERR1884179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884179/ERR1884179_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884179/ERR1884179_2.fastq.gz 1785c9435dcf7eba7fb69da1956dfe18;3a56c09c29b23c4bc5523f4bbd0a4675 231381620;243390231 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 5683294 ERR1884180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1884180/ERR1884180_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1884180/ERR1884180_2.fastq.gz bcaf73310234bde7c9aaff1ef2cae926;f824c3827da20f7e919c91404f76d537 218069724;227192331 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 unspecified double Unknown unknown unspecified PAIRED Unknown 19973979 ERR1880929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1880929/ERR1880929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1880929/ERR1880929_2.fastq.gz 8e9568614230d5b390aa502d891e9083;35370d7558f34d2d8dcecff3f89d7437 1522515708;1519501490 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 188308766 ERR1883819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883819/ERR1883819_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883819/ERR1883819_2.fastq.gz 867d7a1325d50292994da66a088742a5;a81669caef66dc6deb6bbcd450f05dd9 13028657023;13351820743 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.nonUDG_BS double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Unknown 4945097 ERR1883895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883895/ERR1883895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883895/ERR1883895_2.fastq.gz 1d5892c5584dee05c99000a22c2bf084;776fc0e343c8d3e3d252d76a746c141b 396256213;422727991 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19071 ERR1884218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884218/ERR1884218_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884218/ERR1884218_2.fastq.gz c342a2dc4cae0fae137c89124f086a1b;2fec1be2f956d64dbf73dc3d25cb769b 1389910;1419957 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 unspecified double Unknown unknown unspecified PAIRED Unknown 26137591 ERR1880930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1880930/ERR1880930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1880930/ERR1880930_2.fastq.gz 70d0bcb41510b5ba56175820b554312e;06e54ca1347785f9c1aea130b11dbb9e 1982668550;1989284545 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 KH130041.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 201028427 ERR1883820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1883820/ERR1883820_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1883820/ERR1883820_2.fastq.gz 192dbb6190b837a9dbc03e6db14e94e0;74c74638457ce57ea5d5f217e56386d4 14297283682;14759359014 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 KH130041.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19676320 ERR1884219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884219/ERR1884219_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884219/ERR1884219_2.fastq.gz 4c2f594fcaf3508e4bd2457ac5e1e950;996d3e0200c36b2b3e069c7ba9eab61e 1607876319;1610890811 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 unspecified double Unknown unknown unspecified PAIRED Unknown 18366205 ERR1880932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1880932/ERR1880932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1880932/ERR1880932_2.fastq.gz c6c317dafe1dc452f6298a75bce46ea3;135f870f8fae1d713e2f7be38b312ea3 1414763027;1408657834 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 207897676 ERR1883823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1883823/ERR1883823_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1883823/ERR1883823_2.fastq.gz b9f24849f9ea9bacd5d77014a472ae1b;5c182268fbe13b866274d1f29fd5bb65 15629395866;15744483072 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.nonUDG_BS double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Unknown 4877187 ERR1883896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883896/ERR1883896_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883896/ERR1883896_2.fastq.gz bb7ca7b9a9bea7fb62baf9e311848d32;47ab78d630795c7edb41d8781c9c1c6b 396458398;423081042 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 29779785 ERR1884221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884221/ERR1884221_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884221/ERR1884221_2.fastq.gz 4749eedfd2efe9da8b2d7b67000cce79;c89addca1bc66fea2908c47f44bcc764 2431089041;2431019990 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G533 / Jorgen_533 ENA PRJEB19769 ERS1574254 KH130044.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19209000 ERR1884222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884222/ERR1884222_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884222/ERR1884222_2.fastq.gz 4a2763028bcf4a143e0b6805e91bd239;73645e3f27a44b60ef5f31fbce7a4156 1574180084;1566147383 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G533 / Jorgen_533 ENA PRJEB19769 ERS1574254 KH130044.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 25037407 ERR1884223 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884223/ERR1884223_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884223/ERR1884223_2.fastq.gz 07e31f1fa58764501f769a569ae62fb6;49e564e9ff621f59a74ddd21dfbc6fbd 2081594527;2077535382 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 24917844 ERR1883826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883826/ERR1883826_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883826/ERR1883826_2.fastq.gz 8d1c1feb435bb6610656438d30614e0a;80d13cdd871b8eea1836000a88ca2854 2060801483;2069293608 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 161290594 ERR1883887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883887/ERR1883887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883887/ERR1883887_2.fastq.gz cefb4e8451f0f558a86a75e6bb207929;bde7b5ddb9b67c6ac1b6f2c3182b0eba 12929466225;13153660678 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 161708892 ERR1883888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883888/ERR1883888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883888/ERR1883888_2.fastq.gz 36bbf7ddbf7ce081f8b8215dee8141f6;ca1154ef3c156773e4b4d7eda7175386 12932806644;13166984877 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 49435838 ERR1884152 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884152/ERR1884152_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884152/ERR1884152_2.fastq.gz 4b43a299b9fef564f89b13ea4877a10d;e5590916d19bf64336c480ef5e14a773 1903180885;2138402666 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 23739238 ERR1884226 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884226/ERR1884226_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884226/ERR1884226_2.fastq.gz 581a1af6ec2c824ebcecb56d3fab68fb;36649931640551c7e6052007d72e0a94 1937655686;1948633396 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G749 / Jorgen_749 ENA PRJEB19769 ERS1574262 KH130050.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 14490020 ERR1884227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884227/ERR1884227_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884227/ERR1884227_2.fastq.gz 59740a8c38372ec663f55816758641ea;84155771ebbc5f20ddb0c1d93ca6e4e6 1198125511;1196304746 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G749 / Jorgen_749 ENA PRJEB19769 ERS1574262 KH130050.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 21662114 ERR1884228 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884228/ERR1884228_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884228/ERR1884228_2.fastq.gz 8f0c5fb20cbf095a83bd8fcfac794983;8bce00c46395ec5a25c63e1dd0f94b5d 1785636184;1790316195 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 25500184 ERR1884131 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884131/ERR1884131_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884131/ERR1884131_2.fastq.gz 824fece7391dcb2187ae7ecabe80b808;82d76eb5d695e46f68f8365b5a96d39c 953677912;1061495109 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 357836240 ERR1884132 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884132/ERR1884132_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884132/ERR1884132_2.fastq.gz 4a91e0aed2b7c993072fa15fcd12a4e5;f3dd5151a71ef1efb5a5615ae6aaa20e 14639358758;16080965348 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 12375126 ERR1883904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/004/ERR1883904/ERR1883904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/004/ERR1883904/ERR1883904_2.fastq.gz cd11cb3934e36d7715bf1205e53790ba;34aac3abf505fd8d0331f9365a5607ed 1150630675;1155692596 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150848.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 16671228 ERR1883905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883905/ERR1883905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883905/ERR1883905_2.fastq.gz 2fedbabf3dcaa05c129e06c4b60b8125;5c91fde3bfd6aaadb0cca0d516ad7b62 1402816369;1523290925 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 8519292 ERR1883906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883906/ERR1883906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883906/ERR1883906_2.fastq.gz 5e82872aff3637105db775f0cb0c5f3a;6daecf8aafbe349e4407300dab276327 729396729;770691315 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150848.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12940028 ERR1883961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1883961/ERR1883961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1883961/ERR1883961_2.fastq.gz afe91d8f899a119f2d8c9a78b36850a5;f8f55fbf48a524c70cf8b8431be81f15 961230745;1132265484 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 14240491 ERR1883962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883962/ERR1883962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883962/ERR1883962_2.fastq.gz 41ecb93081fdd703ef40457f59c376ad;05e7a98c008eb261df839ca4a8e6d5a0 1042505916;1224669288 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 349893053 ERR1884133 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884133/ERR1884133_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884133/ERR1884133_2.fastq.gz c25c1a9c19019403df9e6398e1b81019;26091a70414f5642896fbea0972f4244 14200533602;15834686995 -Susat2020 2020 10.1038/s41598-020-71530-9 G488 ENA PRJEB36413 ERS4266556 H01541 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 8277430 ERR3841655 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/005/ERR3841655/ERR3841655.fastq.gz 5c73d5f3e6ecf8f912a03a4fcd0681e5 337604567 -Susat2020 2020 10.1038/s41598-020-71530-9 G488 ENA PRJEB36413 ERS4266556 H01541 double Unknown half-udg Illumina HiSeq 4000 PAIRED Unknown 766700478 ERR6474341 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/001/ERR6474341/ERR6474341_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/001/ERR6474341/ERR6474341_2.fastq.gz eba8dd218fd442a586e45ddc6cbd8924;b8a0672bede1ea533b6ac94cc7ba8f13 24995662009;26038898154 -Susat2020 2020 10.1038/s41598-020-71530-9 G701 ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 191158993 ERR3841646 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/006/ERR3841646/ERR3841646.fastq.gz ad40e5810f4cade26206881f064d781a 8028301308 -Susat2020 2020 10.1038/s41598-020-71530-9 G701 ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 7930905 ERR3841647 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/007/ERR3841647/ERR3841647.fastq.gz 59264a85b271b4cc44ece2e409ed6257 329376589 -Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_1 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 394894 ERR3822202 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202_2.fastq.gz d6f139ee7bb118fae44bf822cb424813;3ef3bbd0ce2029e60f915f64b882c83f;037fe98fc821d3fca789f23523f821c6 36086023;8826858;10323374 -Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_3 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 432302 ERR3822203 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203_2.fastq.gz de3995fdc0e82ad7b9de0361def550af;79d36aa87f1ebee638362b89a8cbcc57;a4e919662ae13966b851a5d2cf3fef53 25454816;29614712;37496481 -Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_4 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 1896153 ERR3822204 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204_2.fastq.gz 302442072f58f8028c35e407e1586a89;9b44e537e9f06f596069928be7ec6073;ddd370a46ef0f114f2083735e28e97f9 152872824;41860055;48838840 -Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_6 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 32442 ERR3822205 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205_2.fastq.gz a2f5330a5fdf34f4839138771be352f5;d7e19c8ec19aa76ac4757d9e6567fa7c;495e0e1c264d9fb29d7776a363fb5d03 2931136;3582851;4339313 -Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 ANC_94 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 7661241 ERR3822206 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206_2.fastq.gz cade19e30c801a80df3431ea0123715a;b018fcd0a6794334c88dba29dd690654;f766c9ff778c376727b080b124b9c788 197221857;405359229;414818025 -Dux2020 2020 10.1126/science.aba9411 MVi/Prague.CZE/60/1 ENA PRJEB36265 ERS4249362 6116 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 1503692 ERR3822207 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/007/ERR3822207/ERR3822207_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/007/ERR3822207/ERR3822207_2.fastq.gz 666303617304a0467005978789460be2;6585490bf1e14f6d90e648dcebd42cc0 100662306;189956384 -Dux2020 2020 10.1126/science.aba9411 Mvi/Prague.CZE/60/2 ENA PRJEB36265 ERS4249363 6114 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 949126 ERR3822208 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/008/ERR3822208/ERR3822208_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/008/ERR3822208/ERR3822208_2.fastq.gz 593ea88baaa99756779dadda93f164c3;ad9b5e3bb0805d34127f8151cdbafc45 63731564;94273385 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 378168985 ERR2261878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261878/ERR2261878.fastq.gz 8a595befcb860739abc4b7abacc3a81e 13344714197 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 386386437 ERR2261879 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/009/ERR2261879/ERR2261879.fastq.gz e5cbd08ab9cbdc25a14631ea9618eaf7 13361152013 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 376404791 ERR2261880 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/000/ERR2261880/ERR2261880.fastq.gz 2784c30ffc811fad6e61f63bcf980e8c 13204214450 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12617610 ERR2261881 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/001/ERR2261881/ERR2261881.fastq.gz e7f2045b96e52cd91aff24d17331896e 423059420 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4196604 ERR2261888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261888/ERR2261888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261888/ERR2261888_2.fastq.gz 4c14d9432b946228aed2b5013fd25e9e;096eeb6b02a2aeba6cefc5593b18496f 141140319;148144699 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5245587 ERR2261882 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/002/ERR2261882/ERR2261882.fastq.gz c138318ba32464abd03137f4dee1336e 162819357 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5253815 ERR2261883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/003/ERR2261883/ERR2261883.fastq.gz 2fbd0f56627ba44ce38c8159d8925aed 162260406 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1134291 ERR2261884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/004/ERR2261884/ERR2261884.fastq.gz 0c438bd3662e7cd5d161976251f6df02 35311178 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4889307 ERR2261885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/005/ERR2261885/ERR2261885.fastq.gz f4ad4eb08b679530c3a13dc915b29145 150740043 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4900068 ERR2261886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/006/ERR2261886/ERR2261886.fastq.gz 99a794fd2336a48758c26b90612d2afb 150262135 -Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1072490 ERR2261887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/007/ERR2261887/ERR2261887.fastq.gz 2b3e08d76c185c782d2d78e3ec503e87 33208889 -Campos2021 2021 10.1371/journal.ppat.1009714 HERB_1937 SRA PRJNA668001 SRS7491184 AOLQ-173 double Unknown unknown Illumina HiSeq 4000 PAIRED WGS 110439588 SRR12792042 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR127/042/SRR12792042/SRR12792042_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR127/042/SRR12792042/SRR12792042_2.fastq.gz 2d00d882384be33b3c4cda09d0808667;2bc4e1a1f5bffb94a3b0bb17dc256e05 6573290863;7139385454 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2387769 ERR3654262 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654262/ERR3654262.fastq.gz 5c78be1530e5d9ead00f47721d9e5c65 89340499 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2526272 ERR3654263 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654263/ERR3654263.fastq.gz 4a284a8f93d075bbdf0eb953cda4c003 94569356 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7706782 ERR3654286 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654286/ERR3654286.fastq.gz 8a95793d6783f95402981e0e1b8ac9b5 337510005 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7588871 ERR3654287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654287/ERR3654287.fastq.gz 0d0329b8e323b0a0a0e5b858704dde74 327651923 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 8226443 ERR3654288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654288/ERR3654288.fastq.gz 761e4922ec24ab2bd00fae0dc426e505 355269380 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7858211 ERR3654289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654289/ERR3654289.fastq.gz f8b2fb1c4402399de4cf3006b74600ba 340735038 -Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0102.SE1.3_S0_L004 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 62610663 ERR3654305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654305/ERR3654305_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654305/ERR3654305_2.fastq.gz 6e13dbcec3375f0d7b76dfbbff355e90;57dc377692ad5c3dfa37ea3d3fb11d4d 1891886015;1993121077 -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2637801 ERR3654264 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654264/ERR3654264.fastq.gz bb4dddfef0e9d5ae646a2e033486cda0 99684828 -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2809254 ERR3654265 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654265/ERR3654265.fastq.gz a40027b12b1ac0be97424b4a42566f0c 106143384 -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L002 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 47461534 ERR3654298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654298/ERR3654298_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654298/ERR3654298_2.fastq.gz 617b6d7903dd502edfcc21d4568189aa;e3d8e53ddd067aaf0bfd67221accc042 1429236239;1500911169 -Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102.SE1.3_S0_L002 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2200287 ERR3654306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654306/ERR3654306_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654306/ERR3654306_2.fastq.gz 7f3fbad45aded7c9ecb7013c8ad62848;d4dfc6c23befd6e3fd3729cfc55f7679 68656349;71591175 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3.002.A01_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3247831 ERR3654250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654250/ERR3654250.fastq.gz cf33aae2cf4b5ca213e830e0e0d8a176 117879414 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3.002.A01_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3141221 ERR3654251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654251/ERR3654251.fastq.gz 909da4eabcec6f90a66ad3d6982684de 115050904 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3977803 ERR3654258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654258/ERR3654258.fastq.gz 83d66dcfec33b655775bb2ee2a77d78a 146558966 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4200243 ERR3654259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654259/ERR3654259.fastq.gz 171e75b00a4bc58a4b9f0bb770a7e93c 154859548 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 16805580 ERR3654278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654278/ERR3654278.fastq.gz 155578d55853947abb8799321fa62ffb 717878791 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 16490312 ERR3654279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654279/ERR3654279.fastq.gz 06e66515d95b449e661653e7a4dee9aa 694592347 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 17963293 ERR3654280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654280/ERR3654280.fastq.gz fdf212e5b3fc71af87551388269bf8ec 756170070 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 17116555 ERR3654281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654281/ERR3654281.fastq.gz 73e4e0d3a393bf30006f705a723e0c8b 724026654 -Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102.SE1.3_S0_L005 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2440723 ERR3654303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654303/ERR3654303_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654303/ERR3654303_2.fastq.gz 6f9e2840e1c25584c1fd3657b925fbb4;c4399ab1e38a6d1c21d2812faa891c35 73764923;75726950 -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0102.SE1.1 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 18429539 ERR3654241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654241/ERR3654241.fastq.gz 5ff95d033a438d85c62db2150f4b152c 697662355 -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0103.SE1.1 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 23251062 ERR3654242 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654242/ERR3654242.fastq.gz 49862fbff7b844cc9255de2afb726c37 886425894 -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0102.SE1.2 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 24370186 ERR3654243 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654243/ERR3654243.fastq.gz 3569d69c2bdba85ea72c132e2f89c3c2 919686378 -Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0103.SE1.2 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 26676966 ERR3654244 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654244/ERR3654244.fastq.gz b7164ed147d2197155a85dca18218bc7 1010781742 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2481198 ERR3654266 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654266/ERR3654266.fastq.gz e2bd8363c1200c42a23a54644a1674e0 93699904 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2634040 ERR3654267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654267/ERR3654267.fastq.gz 97d789d61fb587f7b7fa56d44aa28060 99484881 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12837820 ERR3654290 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654290/ERR3654290.fastq.gz cbb0ebb4a0dc92afd4876f13da354bfd 560834073 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12593713 ERR3654291 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654291/ERR3654291.fastq.gz b326640e6375c1d30e9cc9cf1589c373 541793749 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13663838 ERR3654292 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654292/ERR3654292.fastq.gz dd64576f6c3ca4287ce61a44a27413b4 588083912 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13033209 ERR3654293 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654293/ERR3654293.fastq.gz c4cf6f138bd528a513bb93c0e299780e 563883882 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L002 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 54190116 ERR3654299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654299/ERR3654299_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654299/ERR3654299_2.fastq.gz 161e49fa5dc087bafc27dada5bd0b5a3;f621b3c20c59b00b86cba38ea0986e96 1630023583;1723519796 -Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 OBP001.A0102.SE1.4_S0_L008 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5136305 ERR3654307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654307/ERR3654307_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654307/ERR3654307_2.fastq.gz 5af3adf6853d8db15d7278ef6da81db0;b156938ae76f14527dd779a021dfddd0 156627145;161978419 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2736712 ERR3654268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654268/ERR3654268.fastq.gz ffc073114f9c30dc365d30c247077ce7 101599135 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2897746 ERR3654269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654269/ERR3654269.fastq.gz ca6fffafe41317598d377f0c5d642866 107568169 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 11932924 ERR3654294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654294/ERR3654294.fastq.gz 9c789bf9104690bee287eeb3067bc94d 520448495 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 11758056 ERR3654295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654295/ERR3654295.fastq.gz eb33e459e60bc3d98bde746f8e99d35a 504781862 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12724508 ERR3654296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654296/ERR3654296.fastq.gz 5f221660240d592d97343e8af9e28182 546880994 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12169767 ERR3654297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654297/ERR3654297.fastq.gz f00e4896257ad5c5aaf461aee2516910 525329261 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L002 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 66359268 ERR3654300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654300/ERR3654300_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654300/ERR3654300_2.fastq.gz 1ad824b1201ab5f354bb911fd760f10f;1f7bb9b64caaca2bb44ba7a5b2e3bd66 1985408540;2075062945 -Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 SUA004.A0102.SE1.4_S0_L003 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2375208 ERR3654308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654308/ERR3654308_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654308/ERR3654308_2.fastq.gz a5b790291741b60f1ad2163996445f54;fdf7957d40030c2233cab90fede18e54 73624533;76087877 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3.001.B01_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3863980 ERR3654252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654252/ERR3654252.fastq.gz 2f69ccaf9e4cb1c626675318398147c7 140804260 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3.001.B01_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3810901 ERR3654253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654253/ERR3654253.fastq.gz 4b4fb97f0a0eb0c7862c8251e3ad4b63 139937959 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2166757 ERR3654260 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654260/ERR3654260.fastq.gz 5fa3e2eba672d5eec58eae414662d74a 80669560 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2298823 ERR3654261 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654261/ERR3654261.fastq.gz 348ee65c62ecf7a83ec2d7d4badab2b7 85623030 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12518596 ERR3654282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654282/ERR3654282.fastq.gz b31a64064e19161308e3bac8e68100d0 544522231 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12236609 ERR3654283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654283/ERR3654283.fastq.gz 891a01e97a82ba9b0c1fd9d6caf97c16 525425659 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13355310 ERR3654284 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654284/ERR3654284.fastq.gz 4bc34f5d00f5b03d246e08230675a010 572826168 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12621966 ERR3654285 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654285/ERR3654285.fastq.gz 94684021b735e849a19494759a1c8533 544678100 -Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102.SE1.3_S0_L007 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1538367 ERR3654304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654304/ERR3654304_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654304/ERR3654304_2.fastq.gz e846eac92b44deeacd49f5b4a4a9b1cc;3ef0c9584e2408d5c98f492c5ef6f0b8 46293528;47234429 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 969987 ERR3654254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654254/ERR3654254.fastq.gz d571859138d43639d12bc8b149023c4f 34471468 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1029805 ERR3654255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654255/ERR3654255.fastq.gz 0ce1d39a719c784677e4d72b22625e08 36598944 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 981911 ERR3654256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654256/ERR3654256.fastq.gz fb75f24d0b5c7f337e868ea6378a61c0 35038101 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1037298 ERR3654257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654257/ERR3654257.fastq.gz 02ca462a66b05d4c9db08f8b4a36b2a0 37054998 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2350513 ERR3654270 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654270/ERR3654270.fastq.gz 310d2bc8554cea5ee7a14ee74441502e 99699732 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2271361 ERR3654271 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654271/ERR3654271.fastq.gz 1f687e3ed29b1fb77c89d59210f45dfe 94929617 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2517997 ERR3654272 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654272/ERR3654272.fastq.gz 474a5e22cb2c05dd12d3026d448eade9 105280732 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2360893 ERR3654273 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654273/ERR3654273.fastq.gz 4864f306997de2f8d323ea784633fd77 98992089 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2504319 ERR3654274 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654274/ERR3654274.fastq.gz da73b35b700e072dfee49cbfd221f753 105953247 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2405876 ERR3654275 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654275/ERR3654275.fastq.gz da15335ebd8bca4c9967494b4fc5b728 100260779 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2678846 ERR3654276 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654276/ERR3654276.fastq.gz 49b9263e33f427b1baaec9f480ec7fe1 111578854 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2504571 ERR3654277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654277/ERR3654277.fastq.gz 5934451fdccdbe16ab19bb74a057394e 104747125 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 ETR001.A0102.SE1.3_S0_L001 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1365088 ERR3654301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654301/ERR3654301_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654301/ERR3654301_2.fastq.gz 80c049fdcae86e71ed022b87b42758a8;320b2c740a37a44467983425b2fbb0ff 41898785;44786335 -Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 ETR001.A0103.SE1.3_S0_L001 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1346053 ERR3654302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654302/ERR3654302_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654302/ERR3654302_2.fastq.gz d303a4004b275c119f5bcc44dee7423d;f7c9015cf80c951be4516bbf7e05cd94 41332061;44167071 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CA_13 SRA PRJNA660267 SRS7288481 SG_CA13 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1733 SRR12548764 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/064/SRR12548764/SRR12548764.fastq.gz 7f4f85daec8cba958984add20990c29f 49046 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CA_13 SRA PRJNA660267 SRS7288481 C_CA13 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 11142 SRR12548769 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/069/SRR12548769/SRR12548769.fastq.gz 555dc9015f7be759eef1d2a238414e04 268162 -BravoLopez2020 2020 10.1098/rstb.2019.0580 VE_42 SRA PRJNA660267 SRS7288482 SG_VE42 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1206 SRR12548759 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/059/SRR12548759/SRR12548759.fastq.gz 273fe331cb5b75cc387ec723db3acf1e 49643 -BravoLopez2020 2020 10.1098/rstb.2019.0580 VE_42 SRA PRJNA660267 SRS7288482 C_VE42 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 45178 SRR12548768 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/068/SRR12548768/SRR12548768.fastq.gz b2df4cc75cf2acc24b35c5f9b0090fe7 1136181 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417Q SRA PRJNA660267 SRS7288476 C_TO2417Q double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 99525 SRR12548771 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/071/SRR12548771/SRR12548771.fastq.gz 4b9dee85670e9ff5afe60a0985314491 2383008 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417Q SRA PRJNA660267 SRS7288476 SG_TO2417Q double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 18867 SRR12548776 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/076/SRR12548776/SRR12548776.fastq.gz 2cc50ab6048ec3940a96b25d89b3215f 594834 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417J SRA PRJNA660267 SRS7326368 WG_TO2417J double Phusion Hot Start High-Fidelity DNA none Illumina NovaSeq 6000 PAIRED WGS 307840 SRR12595381 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/081/SRR12595381/SRR12595381.fastq.gz 77052c58d16c1d805d0c88aee5a439e6 6632520 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_333O SRA PRJNA660267 SRS7288477 C_TO333O double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 169836 SRR12548770 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/070/SRR12548770/SRR12548770.fastq.gz 53afc4885d004c7fe146c234ef970b17 4168159 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_333O SRA PRJNA660267 SRS7288477 SG_TO333O double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 11031 SRR12548775 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/075/SRR12548775/SRR12548775.fastq.gz 24973c8025cc91be2029a47eaeb2377b 400874 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_01 SRA PRJNA660267 SRS7288484 SG_TLA1 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 3268 SRR12548757 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/057/SRR12548757/SRR12548757.fastq.gz 2389486ebea079bc398936fa2706467d 145756 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_01 SRA PRJNA660267 SRS7288484 C_TLA01 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 132008 SRR12548766 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/066/SRR12548766/SRR12548766.fastq.gz c75f924e55eeb64ce51e5d41c7f35558 3724453 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_22 SRA PRJNA660267 SRS7288483 SG_TLA22 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1992 SRR12548758 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/058/SRR12548758/SRR12548758.fastq.gz e4a14a2d1f6c04c6f2b37b8b28196ab3 83705 -BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_22 SRA PRJNA660267 SRS7288483 C_TLA22 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 121722 SRR12548767 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/067/SRR12548767/SRR12548767.fastq.gz 296f7bcf7ffb035b07f3e823d59f6f53 2977363 -BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_194 SRA PRJNA660267 SRS7288487 C_HSJN194 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 45351 SRR12548762 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/062/SRR12548762/SRR12548762.fastq.gz c82179c84333e4103cdc5326b0495df3 956765 -BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_240 SRA PRJNA660267 SRS7288488 SG_HSJN240 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 4600 SRR12548754 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/054/SRR12548754/SRR12548754.fastq.gz 687e36b93e2f834c1d70257cc1a1c8d3 181748 -BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_240 SRA PRJNA660267 SRS7288488 C_HSJN240 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 103263 SRR12548761 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/061/SRR12548761/SRR12548761.fastq.gz f53fa65e3b570b7e0a724e7ae13e508a 2356610 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_09 SRA PRJNA660267 SRS7288485 SG_CO09 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 6796 SRR12548756 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/056/SRR12548756/SRR12548756.fastq.gz 0245750a8186db6f6ef1db31e2dcbf6d 272034 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_09 SRA PRJNA660267 SRS7288485 C_CO09 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 66538 SRR12548765 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/065/SRR12548765/SRR12548765.fastq.gz 7972980a4d013f50b83f7063044c5ddc 1643191 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_20 SRA PRJNA660267 SRS7288486 SG_CO20 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 4344 SRR12548755 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/055/SRR12548755/SRR12548755.fastq.gz a1d780da916d3b676dbfaca1cca05611 185093 -BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_20 SRA PRJNA660267 SRS7288486 C_CO20 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 146240 SRR12548763 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/063/SRR12548763/SRR12548763.fastq.gz d1499e746c70bc35bcc070a1acff0d35 3429159 -BravoLopez2020 2020 10.1098/rstb.2019.0580 UAQG SRA PRJNA660267 SRS7288478 C_UAQG double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 115193 SRR12548760 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/060/SRR12548760/SRR12548760.fastq.gz f2e36cffb6ee7bcd373af1573711864a 2541255 -BravoLopez2020 2020 10.1098/rstb.2019.0580 UAQG SRA PRJNA660267 SRS7288478 SG_UAQG double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 2438 SRR12548774 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/074/SRR12548774/SRR12548774.fastq.gz 9a4128823490c58d9e8435ed3e5df800 92465 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037135 CA_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 41669177 ERR3649966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR364/006/ERR3649966/ERR3649966.fastq.gz b218a5be0e0f8db9ef4ec28dacca6e6a 2048775086 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037137 CM_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 36781114 ERR3649967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR364/007/ERR3649967/ERR3649967.fastq.gz eb362c601d68658a87d24f26167a3ac2 1697062939 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037139 POS_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 47712546 ERR3650017 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3650017/ERR3650017.fastq.gz fa12b0d6e39c641c097479993d97c7a4 2508330571 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037136 CA_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 52310688 ERR3650065 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3650065/ERR3650065.fastq.gz e35b8be7f9b139352df60554231b07bb 2673416540 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037140 POS_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 32323796 ERR3650068 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3650068/ERR3650068.fastq.gz f0c5f7fa1f25c63afc34bf4599d8158e 1655522429 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037138 CM_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 32441831 ERR3650072 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3650072/ERR3650072.fastq.gz 08f44464136e4d207100bf79bb00561f 1476763733 -vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037141 Lane8 double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Unknown 117644568 ERR3651363 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3651363/ERR3651363.fastq.gz f3dd55def0a2095fc3bd054342f619ba 7160677222 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Barcelona_3031 ENA PRJEB13664 ERS1124787 Barcelona3031 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 61845279 ERR1368878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_2.fastq.gz 095af025dc7f11f79502974aa75e7386;4130f9ec25f3df279f8142845961aadb 4422361795;4446780768 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 15287222 ERR1368865 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368865/ERR1368865_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368865/ERR1368865_2.fastq.gz 01eb7e0c3161b290ac79bff3f88e1cdf;f0399f2e91442bc2a8e0c7b635c8e7da 1269803589;1322002881 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 16039857 ERR1368866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368866/ERR1368866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368866/ERR1368866_2.fastq.gz 7c30428ec6b7ae08a37d98c9daf29600;6a4c9efe374bd06f7979fa75b96f92e9 1282400944;1395894479 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 15359424 ERR1368867 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368867/ERR1368867_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368867/ERR1368867_2.fastq.gz c39f0745aed2a9e56be76dcf3ba357b8;d23b1595242f19a8d377edafd35b92e2 1315513057;1366208724 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 14958812 ERR1368868 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368868/ERR1368868_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368868/ERR1368868_2.fastq.gz d1d02beef7f4db6b728c15b7acf7cca4;449efd3969ea5f7c49982e53b4849dcf 1279475062;1315645140 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 2577213 ERR1368855 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368855/ERR1368855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368855/ERR1368855_2.fastq.gz 3d99cdfd67a2cffcce51c1fc9ed830cf;47ea1c20cf0988d2428a0fba79c9adb3 180699329;172739034 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 40401260 ERR1368856 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368856/ERR1368856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368856/ERR1368856_2.fastq.gz 8279c423d7739ec4bd269872bf05530f;56fef4dcd3093248442f30e3b4f11eab 2936591965;2787252850 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6035706 ERR1368857 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368857/ERR1368857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368857/ERR1368857_2.fastq.gz 941cd04f7c8c4f19680b297b2025355d;86a90f2f22e3b4c0677f2244e2d9cdf0 550999077;569936567 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6615495 ERR1368858 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368858/ERR1368858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368858/ERR1368858_2.fastq.gz 642eb8de6e7551445242cb5ecf8ebc59;9903975aa5e15f3fc88f253cacb62444 585618454;626625299 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6063072 ERR1368859 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/009/ERR1368859/ERR1368859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/009/ERR1368859/ERR1368859_2.fastq.gz 6cfe1ad33a340941a3ea0d5c4ecbc9e9;36fd4ccc6e6a6d761d5b61ffcdf42b90 567174207;585137271 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5884724 ERR1368860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/000/ERR1368860/ERR1368860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/000/ERR1368860/ERR1368860_2.fastq.gz c236f23f9b246f6e01dea71005804c9c;dbf5febad1f975130aa321291c43c4c7 547322249;563272500 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2512583 ERR1368861 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/001/ERR1368861/ERR1368861_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/001/ERR1368861/ERR1368861_2.fastq.gz 294904f7a0b68f1dfdb06d5da945173b;f58fd1c59cae34ec061a6c474fa612bf 182016122;186879541 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2392454 ERR1368862 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/002/ERR1368862/ERR1368862_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/002/ERR1368862/ERR1368862_2.fastq.gz 2b4053da1b52cf505a3bd9bf18239651;c562236e6365c227854a2dc2c0d348a7 173945468;179367373 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2508490 ERR1368863 fastq_all 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DNA none Illumina HiSeq 2500 PAIRED WGS 168849562 ERR2675604 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/004/ERR2675604/ERR2675604_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/004/ERR2675604/ERR2675604_2.fastq.gz 223fb1c99c9727e21c88c5a54aec153e;4a44f9457cc3c9359127de3c55373d5a 7419502331;7651683139 -Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 70824586 ERR2675605 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/005/ERR2675605/ERR2675605_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/005/ERR2675605/ERR2675605_2.fastq.gz ec8cde6affe78f7a3ebd405ca3b57ec5;b3caaa1ed417d0e846bbbd09fe1b9111 3072082748;3161494661 -Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 39574100 ERR2675606 fastq_all 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10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 94445900 ERR1018890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018890/ERR1018890.fastq.gz 34824328973363c9fac8a087783f738b 3552996027 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 78959767 ERR1018891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018891/ERR1018891.fastq.gz 3929b75c73cbe9ca46498b65d3ddd604 2951996152 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 8534732 ERR1018892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018892/ERR1018892.fastq.gz e00e14d800aca75e74103a262649a21f 337970875 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 15118006 ERR1018893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018893/ERR1018893.fastq.gz f2268f2a722e69ba3b767f7b54d724fe 551317205 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 14686978 ERR1018894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018894/ERR1018894.fastq.gz 18702ff1a644aab587e052fb896b5731 525012240 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 40294635 ERR1018895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018895/ERR1018895.fastq.gz 157d9a68ef1b0f4821c0b7ea61e5cb17 1586328095 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 43406653 ERR1018896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018896/ERR1018896.fastq.gz 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ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 30611023 ERR1018900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018900/ERR1018900.fastq.gz ddf69e0333a4c03b8a37a9e79cd2adf3 1235792085 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 33156974 ERR1018901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018901/ERR1018901.fastq.gz 1fe9d26946232c0a9e9b7556eab18937 1346360248 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 32491613 ERR1018902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018902/ERR1018902.fastq.gz a16f97ba0f20009b9470806cfe72fce6 1339623907 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 34436514 ERR1018903 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018903/ERR1018903.fastq.gz b6ba0a711afdbe3f9ad401a30d1afa2c 1399879310 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 34372037 ERR1018904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018904/ERR1018904.fastq.gz 31721034539cb0b611a5d20508773ce1 1391284358 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 52115475 ERR1018905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018905/ERR1018905.fastq.gz 3352c235a9cd285010c857afe7c517ba 2052979481 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 50998927 ERR1018906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018906/ERR1018906.fastq.gz 765c4d152f84ae4ef3581727aa5dba8c 2062361078 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Illumina HiSeq 2500 SINGLE WGS 14107759 ERR1018910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018910/ERR1018910.fastq.gz 90667f786b58917aacebef97212c298f 520825009 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 30236337 ERR1018911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018911/ERR1018911.fastq.gz e3c370d91060daaa69c2ae64ee720996 1155972496 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 30571403 ERR1018912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018912/ERR1018912.fastq.gz 76960c9795e90379bdb0f62f06da22e6 1165135253 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 36752615 ERR1018913 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018913/ERR1018913.fastq.gz 503d4e4aacb232f58cd09a070a6d1c83 1260789416 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 38954960 ERR1018914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018914/ERR1018914.fastq.gz 0e653e6f8f8e767982c6a05e55903162 1341768897 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 43432102 ERR1018915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018915/ERR1018915.fastq.gz 122ce71bfb45a48b608f0f4f1a3fba25 1485934084 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 33932123 ERR1018916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018916/ERR1018916.fastq.gz e083a7ca9f55b93ce5a2cd9431498e22 1284927840 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 15154478 ERR1018917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018917/ERR1018917.fastq.gz 2bdfb2150f9d523c48007824d2d5d18a 599154783 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 59973049 ERR1018985 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018985/ERR1018985.fastq.gz c885b80a6f7b9fce5c0b8c4b6f8bcb93 2974727588 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 17998814 ERR1018986 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018986/ERR1018986.fastq.gz 9edeacba148482cf8e655ff6de94a333 1003378421 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 54616383 ERR1018987 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018987/ERR1018987.fastq.gz 92ab0c58cc021038045f4b822e69d206 2590760467 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 55452080 ERR1018988 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018988/ERR1018988.fastq.gz 2807dc8f27c7d1993690719002d61e57 2688419303 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 53794251 ERR1018989 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018989/ERR1018989.fastq.gz 1967312faafcf6131c8ddf551af95c7b 2596158025 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 47639364 ERR1018990 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018990/ERR1018990.fastq.gz 0350c8dbcc551e5c97baec5821a409a8 2202100629 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 7761049 ERR1018991 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018991/ERR1018991.fastq.gz 41c7b751ab26f8a3487555ade13340e0 342701655 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 21697807 ERR1018992 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018992/ERR1018992.fastq.gz a440ab71518a1f767beaa2d588879b8d 980922388 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 18577053 ERR1018993 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018993/ERR1018993.fastq.gz ad174334333906fbfc4663e26d9d234c 860644923 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 43216955 ERR1018994 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018994/ERR1018994.fastq.gz 702140b235fca4e775a958f2349d59e4 2062106325 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 26165962 ERR1018995 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018995/ERR1018995.fastq.gz fb5f38e216dfe06b7b3e5300000dd99e 1183911815 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 21164806 ERR1018996 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018996/ERR1018996.fastq.gz cab47addcc1bb923a8ad3b611d84ebc9 982958909 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE139 ENA PRJEB10885 ERS848972 MA149_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 21293817 ERR1018997 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018997/ERR1018997.fastq.gz 4ce25d3ecff99bc1c4f9dc7beeb0fa04 1016155565 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 1618196 ERR1018927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018927/ERR1018927.fastq.gz 5a7c8b9f00fee85fa0c8e6130c344a92 63481701 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 4694410 ERR1018928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018928/ERR1018928.fastq.gz b4b6e30fd9705c44005e5e1e284c853d 180859509 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 3864446 ERR1018929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018929/ERR1018929.fastq.gz 042db5353ece442ea4169503e880acb3 143361351 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 7676146 ERR1018930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018930/ERR1018930.fastq.gz 6d7cbec716a9d5e61f01f8d2384897c4 314342914 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 6280068 ERR1018931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018931/ERR1018931.fastq.gz b39a98b0398a13bd596a3de4dcc3759e 287092229 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 14390671 ERR1018932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018932/ERR1018932.fastq.gz 581928c24dddf6a0c3f7cda6547fcabf 533118597 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 89429031 ERR1018933 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018933/ERR1018933.fastq.gz 44031fa35cc1e2827c60a6b0de26ea1a 3431034208 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 77723468 ERR1018934 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018934/ERR1018934.fastq.gz 5d5f562869d02bafc703fe50eb4936e6 3002882445 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 65274204 ERR1018935 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018935/ERR1018935.fastq.gz 7728cf364a4b1a907e31e8f9f2b2019a 2503525936 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 9564601 ERR1018936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018936/ERR1018936.fastq.gz 1037cfa0f4b5fcd5b3ca994597002ab7 438254984 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 11109723 ERR1018937 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018937/ERR1018937.fastq.gz 7cd3371bee50ef20780403b48f02f3a7 440858043 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 11768090 ERR1018938 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018938/ERR1018938.fastq.gz be70f678b2a892c64f1ab04cee31a23c 481653161 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 94183500 ERR1018939 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018939/ERR1018939.fastq.gz d750b8de85603b2573334331712ab889 3997988095 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 154296108 ERR1018940 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018940/ERR1018940.fastq.gz b5cb0650a05a8ae8c6c2352d725a10f8 6685688564 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 151696835 ERR1018941 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018941/ERR1018941.fastq.gz eb245ae7756d2f49d9210de4c0a3e52b 6407798459 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 33001741 ERR1018942 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018942/ERR1018942.fastq.gz 92a635cc37e9fe6eaa454a8c907faf8c 1398547773 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 72806509 ERR1018943 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018943/ERR1018943.fastq.gz 24c68472ef13d2bb1e866fa4cc74c384 3199509005 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 75363903 ERR1018944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018944/ERR1018944.fastq.gz 347f2eb65fc8bbdc0108a1dcd920ce3f 3300311614 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 81363221 ERR1018945 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018945/ERR1018945.fastq.gz 0fa0d47c6f599631ada6ef41220a9110 3521475973 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 38111598 ERR1018946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018946/ERR1018946.fastq.gz 9cff4dc386e4e969273b839edf429a1a 1735967987 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 34540681 ERR1018918 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018918/ERR1018918.fastq.gz cb6d121d1a03ea6a8a0d059d0e017cb5 2236022608 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 162315780 ERR1018919 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018919/ERR1018919.fastq.gz b93ff27f2737f03d30c504d962794679 10346534129 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 238542024 ERR1018920 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018920/ERR1018920.fastq.gz 909802c55cfaab19b94c779082efd5d0 15057132834 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 237441444 ERR1018921 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018921/ERR1018921.fastq.gz fe6f04f73cbcdbc286b0356ceb5821cf 14696455927 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 121363017 ERR1018922 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018922/ERR1018922.fastq.gz 1d9fc84592af81520dc0d80e3bc10223 7396578567 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 76326599 ERR1018923 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018923/ERR1018923.fastq.gz e5607a19b5deb4cf47b0f0a01fe88352 3389667947 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 85118534 ERR1018924 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018924/ERR1018924.fastq.gz 1003af3c0cf74f6fec79e1fdb670079e 3915306759 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 90058307 ERR1018925 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018925/ERR1018925.fastq.gz 4b2a937c1176fddbbb312f90e4669cdf 4151659151 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE397 ENA PRJEB10885 ERS848974 MA413_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 100132487 ERR1018926 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018926/ERR1018926.fastq.gz ab693d9f9cb994d192bc43a945daa6eb 4580099958 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 16844725 ERR1018947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018947/ERR1018947.fastq.gz ac49e87aa271ea71343e6ebe8a143f72 654689745 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 33725243 ERR1018948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018948/ERR1018948.fastq.gz 2513511357574d8887b2733ff3acc86f 1257092992 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 38388338 ERR1018949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018949/ERR1018949.fastq.gz e7202a8377c384a564c1e9151c9f7478 1455027795 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 81176315 ERR1018950 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018950/ERR1018950.fastq.gz 95f897ef7b18f69fb287ee5ecf3b6e74 3163109281 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 81845074 ERR1018951 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018951/ERR1018951.fastq.gz be5b3764412133ff5f93e517eac37c5d 3178047913 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 58362335 ERR1018952 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018952/ERR1018952.fastq.gz 0290be08bcf7c69fe3d4579d8e2934a8 2213306717 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 6845205 ERR1018953 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018953/ERR1018953.fastq.gz 39d2269739cf88835128473b604a753a 248719634 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 82114457 ERR1018954 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018954/ERR1018954.fastq.gz 1d7b5cfc130afd26090af983aa936657 3632830625 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 86460657 ERR1018955 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018955/ERR1018955.fastq.gz f70a209ffcbb620c6bb5cd17c7410537 3396281028 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 84543385 ERR1018956 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018956/ERR1018956.fastq.gz 65306d0b53be82891ef23bce554c5aae 3220435188 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 1767245 ERR1018957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018957/ERR1018957.fastq.gz 81c901ed3b34911de44e8cea4e607cf8 60146843 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 44914701 ERR1018958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018958/ERR1018958.fastq.gz 24d69e033bf2bf971222f9c0b4eceaca 1633333530 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 98525993 ERR1018959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018959/ERR1018959.fastq.gz 0a46c19312d69fa3a2914e51d41d6f27 3708884845 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 104546093 ERR1018960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018960/ERR1018960.fastq.gz c8e86dfa8676c736ad43e60af9736708 3921162745 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 1974613 ERR1018961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018961/ERR1018961.fastq.gz 5e060c92cd8e6e8bb1ca1afa22a573c6 69521346 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 2104094 ERR1018962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018962/ERR1018962.fastq.gz 4edd1c27d6d3b465b208d3bcbb23d827 74310987 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 2371381 ERR1018963 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018963/ERR1018963.fastq.gz d390774c7828afc05cab03bc5f852e35 83130867 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 111300264 ERR1018964 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018964/ERR1018964.fastq.gz 9dc4180a3f9486405245d96af1cde179 4120161109 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 53508344 ERR1018965 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018965/ERR1018965.fastq.gz 9d7d35e1e1f54965df816bfda7cd33d0 2092364299 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 6908382 ERR1018966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018966/ERR1018966.fastq.gz ad4c8a60c5f37d9ac729af4642043101 256562800 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 13734870 ERR1018967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018967/ERR1018967.fastq.gz cfde499929357b9e589c4063a2aa5340 492493995 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 15430275 ERR1018968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018968/ERR1018968.fastq.gz de6a35ae1aa0ccd69cc47b8ec31cc5f7 563739752 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 32407830 ERR1018969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018969/ERR1018969.fastq.gz 545512307384cd5d693ec21763d969c0 1216349210 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 35725254 ERR1018970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018970/ERR1018970.fastq.gz e599480b1cf38d3c65422b95f5ad7b32 1338903871 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 23586813 ERR1018971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018971/ERR1018971.fastq.gz b66ce9be43f84366d34eed1ebb794e7d 859980752 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 7521308 ERR1018972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018972/ERR1018972.fastq.gz 159a355462610093453c57ac939e38cc 277589089 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 38818593 ERR1018973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018973/ERR1018973.fastq.gz 6ccce5a3cb877598bd61436960d9c805 1471568442 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 39472743 ERR1018974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018974/ERR1018974.fastq.gz 666d471c79b2ab21a35a4e484e07e1ee 1659178748 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 40100993 ERR1018975 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018975/ERR1018975.fastq.gz 123531badcf33ca00435a19d23c12c30 1474846960 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 98144828 ERR1018976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018976/ERR1018976.fastq.gz 438f88acad4f764cfa5cf1715632b5e2 3851432777 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 75653683 ERR1018977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018977/ERR1018977.fastq.gz 3ff320e2e5597b3bb161a3c5bafadd96 2613371191 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 163334070 ERR1018978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018978/ERR1018978.fastq.gz a86a02b8f6df8f5903d378d32280400b 5833313097 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 168554803 ERR1018979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018979/ERR1018979.fastq.gz 21e32629ee698683075c61b74d59847b 5997253947 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 110711217 ERR1018980 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018980/ERR1018980.fastq.gz ec2e3fab2379f17e6d587149b16dbecb 4504984357 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 117455980 ERR1018981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018981/ERR1018981.fastq.gz c1ccea70936b0363ca0ea72d6909fca3 4794110000 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 132287665 ERR1018982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018982/ERR1018982.fastq.gz b8f8f3c9b94d5f80014b276b28b5a423 5363123512 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 184262166 ERR1018983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018983/ERR1018983.fastq.gz 77913696bb20aac5df7cfd929929c3d1 6493463112 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 84486764 ERR1018984 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018984/ERR1018984.fastq.gz 362807e093e0c5811235e4fdbb76b342 3125936553 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 17222877 ERR1018998 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018998/ERR1018998.fastq.gz 4551a8c940caa2607243a48675c6d143 683901210 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 43062851 ERR1018999 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018999/ERR1018999.fastq.gz fe2dc25cee15bf4d90949edf5c2ccc7c 1556673318 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 47990992 ERR1019000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1019000/ERR1019000.fastq.gz f55f6cdff8f332d87eaeb362feb20126 1795969272 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 59697605 ERR1019001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1019001/ERR1019001.fastq.gz 8802725195f09cb5cba6bbd16d3657f9 2161585633 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 86273724 ERR1019002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1019002/ERR1019002.fastq.gz 3bfbaf4b8f56dc5ad70e216ccf0ac93a 3458983288 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 54311189 ERR1019003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1019003/ERR1019003.fastq.gz c428750f1eab0d2db6ce9a497590db68 1982035964 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 147339017 ERR1019004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1019004/ERR1019004.fastq.gz 0a3fa9d0dbf63f44dd978d41ca771a57 5871559348 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 140186792 ERR1019005 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1019005/ERR1019005.fastq.gz 1f5713a68db83d6b9b700ccc126dec38 5172082468 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 70978646 ERR1019006 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1019006/ERR1019006.fastq.gz d9dabfe97d2cb82e28291ec4b23c514c 2659680744 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 80074109 ERR1019007 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1019007/ERR1019007.fastq.gz 4f600adb7999cb9406551db65d5a6cdd 3110655612 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 84439656 ERR1019008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1019008/ERR1019008.fastq.gz bd78265fdf4f1d5393fb3fed8cbafcdf 3290645904 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 95143470 ERR1019009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1019009/ERR1019009.fastq.gz 442170a6b77d89673bad613b4cb68ef8 3683570663 -Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 223805 ERR4093835 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093835/ERR4093835.fastq.gz 4fa2c1cc8cc1cb45f3a878fd4449288e 11148473 -Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap3 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 58365 ERR4093836 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093836/ERR4093836.fastq.gz 77d1aaaf939fd91f028a38000db59f8c 2422082 -Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 9097 ERR4093837 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093837/ERR4093837.fastq.gz fcc338ac3dfbdc009bf2755bde5592ec 420965 -Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 105936 ERR4093857 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093857/ERR4093857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093857/ERR4093857_2.fastq.gz b92bd9da7f848fad49d5c3d6463cafb0;7afe69e6a3d3ac15a9e0594f1a337baa 5503971;6061032 -Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 5890 ERR4093858 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093858/ERR4093858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093858/ERR4093858_2.fastq.gz e9ea1fbfda0462634497f94b388bb3ae;e6b8f0daf0c18262c59feca529acfd3a 299417;336758 -Muhlemann2020 2020 10.1126/science.aaw8977 VK388 SRA PRJEB38129 ERS4540433 CGG2_VK388_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 195081 ERR4093838 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093838/ERR4093838.fastq.gz 486ec6c27b6c6bb40d86ede6bec2dfe1 7935039 -Muhlemann2020 2020 10.1126/science.aaw8977 VK388 SRA PRJEB38129 ERS4540433 CGG2_VK388_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 234793 ERR4093839 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093839/ERR4093839.fastq.gz a7e4c05e08cfcf53a43a85894df06141 8879503 -Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 309988 ERR4093842 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093842/ERR4093842.fastq.gz 54418ec5b53d7feb8fe2dc1ad8866f62 12670057 -Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 107396 ERR4093843 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093843/ERR4093843.fastq.gz e1b8763abff779eaea1fc84fdc780c4d 4461622 -Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 3032 ERR4093844 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093844/ERR4093844.fastq.gz ffc884870b2301291b6b061edf0c88f3 137695 -Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 10772 ERR4093859 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093859/ERR4093859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093859/ERR4093859_2.fastq.gz cdddfd7e64bae0323bc50b4dd8d09f90;6d5a783decccce952e1a69dc422ddb03 558534;639336 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 27588 ERR4093831 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093831/ERR4093831.fastq.gz ce51d6cdfcaf3380772e3e533caf3297 1037747 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 524928 ERR4093832 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093832/ERR4093832.fastq.gz 42917f50bd4533ceebc77e069a43183b 21724766 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap3 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 32854 ERR4093833 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093833/ERR4093833.fastq.gz 28d76681c46ffb76bbcee41ace6879ba 1320643 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 221962 ERR4093834 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093834/ERR4093834.fastq.gz 2153f85e08f2e2adc15404512776fa23 9991882 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 43894 ERR4093855 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093855/ERR4093855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093855/ERR4093855_2.fastq.gz b8a7fd515a6d9797a36fd86700ad7451;66497e925c43036c453dc5d63dc6e49f 2262699;2547993 -Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 1721 ERR4093856 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093856/ERR4093856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093856/ERR4093856_2.fastq.gz 7b27cf12de34efb7a356ba18ad3ee906;aad6089e2174305e950f4b377f5053cf 88947;102595 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 191331 ERR4093824 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093824/ERR4093824.fastq.gz 9d43574785b09660a5dae17238111c45 6737023 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 978013 ERR4093825 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093825/ERR4093825.fastq.gz 6b95b1e5ab266d1ecd24f2695507cb93 34885142 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap3 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 60070 ERR4093826 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093826/ERR4093826.fastq.gz 9f840d2b3684663cacbab609da52de9b 2212045 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 162402 ERR4093827 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093827/ERR4093827.fastq.gz 947a6b3890368b4e4f1112be7225444a 6477384 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 85156 ERR4093852 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093852/ERR4093852_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093852/ERR4093852_2.fastq.gz bb7af9ae86ec1575d989429643660c5e;d26458b39f5f101515fe5f820200143f 4246723;4692260 -Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 4030 ERR4093853 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093853/ERR4093853_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093853/ERR4093853_2.fastq.gz 3486682132895becebe436b60d7eaf53;92a056611c9d87c016a881b52d3ff30c 201195;219552 -Muhlemann2020 2020 10.1126/science.aaw8977 VK533 SRA PRJEB38129 ERS4540437 CGG2_VK533_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 8904 ERR4093848 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093848/ERR4093848.fastq.gz f04528d69f39aaf043596bedee69437b 334390 -Muhlemann2020 2020 10.1126/science.aaw8977 VK533 SRA PRJEB38129 ERS4540437 CGG2_VK533_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 365886 ERR4093849 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093849/ERR4093849.fastq.gz fc65666e52fa296ffb84a5608db1df50 18097310 -Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 114012 ERR4093845 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093845/ERR4093845.fastq.gz 9fb8cea7e27e30a3a0175b45c66938a3 4139547 -Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 127617 ERR4093846 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093846/ERR4093846.fastq.gz 5b68adc1f2eb97cd499dff28ed6022bf 5475277 -Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 56408 ERR4093847 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093847/ERR4093847.fastq.gz 1ea64356fa32ea67529997083acc1b57 2866443 -Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 16929 ERR4093860 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093860/ERR4093860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093860/ERR4093860_2.fastq.gz d0cb4fe3cd995a18a6f113dfebf2995c;e6d2f6a5b7c2f350b843417a7b7e0530 856872;1004416 -Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 20884 ERR4093828 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093828/ERR4093828.fastq.gz eb38b7488645b89ee0cf3f6ba4e37a2f 691178 -Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 54739 ERR4093829 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093829/ERR4093829.fastq.gz 3d115dd6b207603a55afeff3d60c5a4f 1859336 -Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 15924 ERR4093830 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093830/ERR4093830.fastq.gz 1a807fbef18666a24d1a35d180617ec1 663508 -Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 2993 ERR4093854 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093854/ERR4093854_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093854/ERR4093854_2.fastq.gz 14e071267a148122e9e4e04f2d965159;d57b604b0e69c13f4b13241650a39c17 154029;172247 -Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 16288 ERR4093808 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093808/ERR4093808.fastq.gz a0233f6cd04522c1519b6eb82bb192b2 593290 -Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 41244 ERR4093809 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093809/ERR4093809.fastq.gz 0b70c2c58c0c8f7d39735cc9582fd49b 1540356 -Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L2_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 47995 ERR4093810 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093810/ERR4093810.fastq.gz 02f17d6de96f052f5939a19a2c04662b 1784537 -Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L3_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 35491 ERR4093811 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093811/ERR4093811.fastq.gz 9d45741fe6b73b3e166352dd754eae71 1300548 -Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 31178 ERR4093812 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093812/ERR4093812.fastq.gz 81acc07c449766f94899094b5bbbbff0 1077192 -Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_cap2 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 198129 ERR4093813 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093813/ERR4093813.fastq.gz 8fe4106bc0a420efa1630da1a85592ed 6964171 -Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 38421 ERR4093814 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093814/ERR4093814.fastq.gz f39048ca0810a94c8ee9b0bccde5781a 1711943 -Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L2_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 85315 ERR4093815 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093815/ERR4093815.fastq.gz 4a74fd663c9eb2bb93bb7e72ace55300 3835083 -Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L3_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 68527 ERR4093816 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093816/ERR4093816.fastq.gz 11504f3af61be4886ad7289bd33edd0c 3101735 -Muhlemann2020 2020 10.1126/science.aaw8977 VK443 SRA PRJEB38129 ERS4540434 CGG2_VK443_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 24884 ERR4093840 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093840/ERR4093840.fastq.gz 1d9edb9a08391bde75a46bfa71be2fbd 930166 -Muhlemann2020 2020 10.1126/science.aaw8977 VK443 SRA PRJEB38129 ERS4540434 CGG2_VK443_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 249761 ERR4093841 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093841/ERR4093841.fastq.gz d7def1bd408f0f2af3c303e1a9f19421 11023135 -Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 14552 ERR4093817 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093817/ERR4093817.fastq.gz c67dfde2d53c9d60c2d0058893df96a7 510465 -Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 46686 ERR4093818 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093818/ERR4093818.fastq.gz 316eded82ffefff341956acaba25ccd8 1750579 -Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap3 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 1041 ERR4093819 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093819/ERR4093819.fastq.gz fac8c21aa0138d6c178c74146754564e 35943 -Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 662597 ERR4093820 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093820/ERR4093820.fastq.gz 2c3e313c1c8076372e8592a41d393e15 30818331 -Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 3507 ERR4093850 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093850/ERR4093850_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093850/ERR4093850_2.fastq.gz 3062b38ba028d1afb2a43bab68ba84e2;45457ec4dd42faf743e744b37084751c 177077;205065 -Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 41552 ERR4093821 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093821/ERR4093821.fastq.gz 528925cce0c68a1ffb884d9ac2ba0c8f 1271908 -Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 223139 ERR4093822 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093822/ERR4093822.fastq.gz e1f901e2af5f32a0c64e06c2cb3484be 10002486 -Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 140776 ERR4093823 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093823/ERR4093823.fastq.gz d135bbd8d1fcdf199dbfa3014c01dc5e 5892798 -Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 44041 ERR4093851 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093851/ERR4093851_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093851/ERR4093851_2.fastq.gz cc7c0cc275811a4a9144ca8395d287bc;5202c1cfdb646b87675e574d4a964dde 2237231;2606288 -Williams2020 2020 10.1128/mra.00850-20 364459 SRA PRJNA643812 SRS6939171 L1 double Unknown unknown Illumina HiSeq 2000 PAIRED WGS 1605869 SRR12136712 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/012/SRR12136712/SRR12136712_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/012/SRR12136712/SRR12136712_2.fastq.gz 2976948a2f1a0400be2ee485bbd9c0b2;036b93564b68d7f66cf82632cb97dd1a 103759857;100622001 -Williams2020 2020 10.1128/mra.00850-20 AMNH98137_Q01 SRA PRJNA643812 SRS6939170 L2 double Unknown unknown NextSeq 500 PAIRED WGS 7410027 SRR12136713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/013/SRR12136713/SRR12136713_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/013/SRR12136713/SRR12136713_2.fastq.gz 1df07ef7fc45d838039e0aa2d9472004;d95165a823b6663360a7131abf2a420f 473558619;468736273 -DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369379 Ebro-1944-CA double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 200638 ERR3280963 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/003/ERR3280963/ERR3280963.fastq.gz 9d7c573ea33c6d90a8c604fdd26fb173 8837062 -DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369380 Ebro-1944-CM double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 7854 ERR3280964 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/004/ERR3280964/ERR3280964.fastq.gz 35c96b62c182f9a7896f7419b996e0d2 469190 -DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369382 Ebro-1944-POS double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 9006 ERR3280966 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/006/ERR3280966/ERR3280966.fastq.gz e2adbb2f5c11e77a5d04b1425eaf1a14 577071 -DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369383 Ebro-1944-2017 double Unknown none Illumina HiSeq 4000 PAIRED Targeted-Capture 13467 ERR3280967 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967_2.fastq.gz de0279894d6733cc14d7eab67ad638a3;c23fcdf3a1d285259ea8916a0bb0d1a9;f52e84d3f4267ca24d072f9ba950529e 502791;50519;49275 -Bos2016 2016 10.7554/eLife.12994.001 OBS107 ENA PRJEB12163 ERS1020860 OBS107_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 14646710 ERR1193532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_2.fastq.gz 884a4afc0b75b86bbb323f58b80a041c;9e5e2bca98fdf7b541b490f5955a9ad3 1149013961;1150891719 -Bos2016 2016 10.7554/eLife.12994.001 OBS107 ENA PRJEB12163 ERS1020860 OBS107 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 851096 ERR1193537 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/007/ERR1193537/ERR1193537.fastq.gz 864da17f8807ceecad7368caf2c92997 39236628 -Bos2016 2016 10.7554/eLife.12994.001 OBS110 ENA PRJEB12163 ERS1020861 OBS110_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 9879257 ERR1193533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/003/ERR1193533/ERR1193533_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/003/ERR1193533/ERR1193533_2.fastq.gz 0eaf58fa5c6a9587d2153ef649b1af9a;c0e6f849cdc6d2d70f09d385044a4eb2 798688570;806373020 -Bos2016 2016 10.7554/eLife.12994.001 OBS110 ENA PRJEB12163 ERS1020861 OBS110 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 855988 ERR1193538 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/008/ERR1193538/ERR1193538.fastq.gz 72d0f49993301a2aa8c70c2a721e1b05 45605618 -Bos2016 2016 10.7554/eLife.12994.001 OBS116 ENA PRJEB12163 ERS1020862 OBS116_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 16858273 ERR1193534 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/004/ERR1193534/ERR1193534_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/004/ERR1193534/ERR1193534_2.fastq.gz 72c5a770e1ee4c48b0df3d76f490bf5d;d853f82c01c64a11a592dd26412aadbc 1323117740;1330231355 -Bos2016 2016 10.7554/eLife.12994.001 OBS116 ENA PRJEB12163 ERS1020862 OBS116 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 1363415 ERR1193539 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/009/ERR1193539/ERR1193539.fastq.gz 5ef6cf8f4c6bebeb3f1bb4a5e6a07ac0 63050240 -Bos2016 2016 10.7554/eLife.12994.001 OBS124 ENA PRJEB12163 ERS1020863 OBS124_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 48797602 ERR1193535 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/005/ERR1193535/ERR1193535_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/005/ERR1193535/ERR1193535_2.fastq.gz c7d090ee0a81c21fb57662dca1623962;55be600622256d8a203f9320ad3d3a30 3899081493;3928448850 -Bos2016 2016 10.7554/eLife.12994.001 OBS124 ENA PRJEB12163 ERS1020863 OBS124 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 973763 ERR1193540 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/000/ERR1193540/ERR1193540.fastq.gz 276a966ba01b38ec442d40c748d9de2c 39933586 -Bos2016 2016 10.7554/eLife.12994.001 OBS137 ENA PRJEB12163 ERS1020864 OBS137_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 120018142 ERR1193536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/006/ERR1193536/ERR1193536_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/006/ERR1193536/ERR1193536_2.fastq.gz f801da036d33c973cae85611de7e8b68;1a61da048a646c95409e59082e6f0cb9 9510551390;9582886762 -Bos2016 2016 10.7554/eLife.12994.001 OBS137 ENA PRJEB12163 ERS1020864 OBS137 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 1583596 ERR1193541 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/001/ERR1193541/ERR1193541.fastq.gz 94f97aa57725c44b673eb077133a4086 63965851 -Duggan2016 2016 10.1016/j.cub.2016.10.061 VD21 SRA PRJNA348754 SRS1749354 RMP15SP double Unknown unknown Illumina HiSeq 1500 PAIRED Targeted-Capture 818264 SRR4427811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/001/SRR4427811/SRR4427811_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/001/SRR4427811/SRR4427811_2.fastq.gz a1866b517d35c8bb1d528f3e152861c1;0a30bdf0aad9614b753735539d2c346d 50785039;52375129 -Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071788 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 5841932 ERR4624258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624258/ERR4624258_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624258/ERR4624258_2.fastq.gz ff1e6359421c259b21ed8291b262d268;98fddb5a33349e96a5a781586808bafb 129774972;132798755 -Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071789 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 3558338 ERR4624259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624259/ERR4624259_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624259/ERR4624259_2.fastq.gz d2a69ea2fcd4a8845ba85023ac7eb343;d0f13c18b44970d5d5a85aad04f82098 79863649;80987691 -Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071790 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 4923840 ERR4624261 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624261/ERR4624261_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624261/ERR4624261_2.fastq.gz 35b5f97857d7d5ca55e6c954abbca44d;3a882a95de0dc93cffdbd1cf1645f9d7 110012416;112638641 -Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071775 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 15041610 ERR4624266 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4624266/ERR4624266_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4624266/ERR4624266_2.fastq.gz d7e7035b5520c66f490b20cf8cb9faf8;2007db84495c3643a16ed172862e3c8a 272080624;295511568 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071791 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 2086014 ERR4624268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624268/ERR4624268_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624268/ERR4624268_2.fastq.gz ba1b4012b31e525f26353af97f99cd9d;309e388e64db4f51b196bdadf8a1d856 55786646;56338804 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071792 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 116 ERR4624269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624269/ERR4624269_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624269/ERR4624269_2.fastq.gz 2548ece59464a15f0da88d0f4f67c25e;8323ae381d83a1af91df7db260449c46 3629;3597 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071793 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 190957008 ERR4624301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624301/ERR4624301_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624301/ERR4624301_2.fastq.gz 771ea60424e7ba65bf2104f6934bdc87;ce8913c8ef6dffe9de6690676e253a87 5294537948;5356064121 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071794 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 326695740 ERR4626656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626656/ERR4626656_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626656/ERR4626656_2.fastq.gz 562301c2d22c326f3fe1de990f738e44;c299af6c869c762c0475ce892736b46a 8990738217;9078418758 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071776 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 57731498 ERR4626666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626666/ERR4626666_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626666/ERR4626666_2.fastq.gz 3dd85ecbe4dcc2794fe3dbca19422670;dca314dccf66a80da4bc0c14f7c5b875 1182293366;1311413804 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071795 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 275176 ERR4624258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626667/ERR4626667_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626667/ERR4626667_2.fastq.gz b58bd981ad5d605285d0a2287752372e;6280646b1c1c55f6ad147ed358cd6eeb 6922113;6843248 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071796 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 234644 ERR4626668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626668/ERR4626668_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626668/ERR4626668_2.fastq.gz e3883d6576ebd6634a63783bfbc5b06a;7413a0c77fcc93a8caa1fe71bae49cc1 5907155;6155756 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071797 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 387658 ERR4626669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626669/ERR4626669_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626669/ERR4626669_2.fastq.gz 1d713ec5ff3c907666ea7024a530a677;25716a5676e4a048348718237aef25aa 9975300;10051816 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071770 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED WGS 13800196 ERR4626670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/000/ERR4626670/ERR4626670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/000/ERR4626670/ERR4626670_2.fastq.gz 52629631defa6ebfc75c556549045a8a;77a4548a521a16b1fb47c944a7ba2d50 286073551;282439972 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071771 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED WGS 5080 ERR4626671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4626671/ERR4626671_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4626671/ERR4626671_2.fastq.gz 43a30489f9f79527c8f47a7b4ce0a10c;307512595e3a82d23c4b8fe283d7fd2d 136826;131789 -Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071777 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 15215118 ERR4626673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626673/ERR4626673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626673/ERR4626673_2.fastq.gz 03d66cf0bc5575358b6e814b6dc4489b;66c40cdfb3d0d8093ada788de4f478c1 277099035;301188374 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071778 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 415068 ERR4626674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626674/ERR4626674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626674/ERR4626674_2.fastq.gz 4faefdf2123a3feae30db76ab7fc9c8e;8d61c819d3cbbb35ba8b2546c718314d 10604096;10745016 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071779 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 751410 ERR4626675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626675/ERR4626675_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626675/ERR4626675_2.fastq.gz 50d72dc760c1cd1e0662eef395025f73;fd6098c1cd3aece62bbf3e1f4319bfb9 19580625;20001209 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071780 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 512610 ERR4626676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626676/ERR4626676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626676/ERR4626676_2.fastq.gz 79df5024197b7dda6882be3542c45426;038de2ff9ec7a39b02caba6643d81b56 13647880;13413784 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071772 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 23346832 ERR4626677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626677/ERR4626677_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626677/ERR4626677_2.fastq.gz db1b5b5925ac8607058a71915c226c5f;7dd118d8bf50e4bce8bc0e6662470e04 455913882;482702547 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071781 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 9460148 ERR4626678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626678/ERR4626678_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626678/ERR4626678_2.fastq.gz edcfb896f7bc0f7e8702531623108b77;f53e46b534775bf9aaf7019b4c44807b 235182688;238619998 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071782 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 12538458 ERR4626682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/002/ERR4626682/ERR4626682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/002/ERR4626682/ERR4626682_2.fastq.gz 0d6318ae235678c09ccb34ae0da9a567;4dbf7e912e360c3a287130a34457a113 311783578;323773354 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071783 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 17596204 ERR4626683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626683/ERR4626683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626683/ERR4626683_2.fastq.gz 54b71b2ca3773e9986b7bf759f856fff;e84d5b1289d123684367e6f676dd94cd 432516959;442626640 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071773 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 19179342 ERR4626684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626684/ERR4626684_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626684/ERR4626684_2.fastq.gz f3a49f2b52411fa5f34e5ff7116e8591;ce1c43e809bc2225f31d9af3cbdd42d9 373493102;402992251 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071784 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 106082 ERR4626685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626685/ERR4626685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626685/ERR4626685_2.fastq.gz 38bfe6409e92fa9188e47ff1ccfc12a8;0f15a5d1a1cba1d78486dc5bbe7426c1 2999647;3017106 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071785 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 22 ERR4626686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626686/ERR4626686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626686/ERR4626686_2.fastq.gz 435693804b2db5458478e01bccd5cc3c;060d4b7313dee349ffcc093ee0336843 753;794 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071786 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 1355606 ERR4626687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626687/ERR4626687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626687/ERR4626687_2.fastq.gz 6da2681ca7f2d77781712d6c1e58977c;9c0358d255b654f27bd6e452592d645f 39072794;39961417 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071787 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 414392 ERR4626688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626688/ERR4626688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626688/ERR4626688_2.fastq.gz 07ebc3a84ee8a42008d203915acd4a70;322e275f793c6de89b47ffbc5208f622 10287005;10642703 -Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071774 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 22190332 ERR4626689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626689/ERR4626689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626689/ERR4626689_2.fastq.gz 550ed584bb1f831fba2f0183450e3b54;ce688b015d7a37e2a806b653ccc3581f 443883379;479843170 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177500 ENA PRJEB1877 ERS241528 KM177500_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 808055 ERR267866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267866/ERR267866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267866/ERR267866_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267870/ERR267870_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267870/ERR267870_2.fastq.gz 4f9c60836580f665e3fa8a3abbd1bfb0;b7ace074061cde3a0b83e00b036f059b 80669123;80654114 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177514 ENA PRJEB1877 ERS241530 KM177514_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 23433946 ERR267871 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267871/ERR267871_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267871/ERR267871_2.fastq.gz 7c48498a8b9e89a35305d64adfffcd03;38823eed1054d96a9007381b1ea69924 2031288095;2089457311 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177548 ENA PRJEB1877 ERS241531 KM177548_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 611320 ERR267872 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267872/ERR267872_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267872/ERR267872_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267882/ERR267882_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267882/ERR267882_2.fastq.gz e812f242fd7eb620538c2242405e5209;b04eea830063d30504acbf3c2dcb738c 99462934;99161011 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177517 ENA PRJEB1877 ERS241536 KM177517_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 33548302 ERR267883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267883/ERR267883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267883/ERR267883_2.fastq.gz 0153ee9c532b24f444738349fd8eaffd;75abaf76a54b4bbc74f96f50e720eaf2 2864093500;2946082146 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182897 ENA PRJEB1877 ERS241537 M-0182897_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 3775243 ERR267884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267884/ERR267884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267884/ERR267884_2.fastq.gz 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ERS241538 M-0182906_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 24584847 ERR267887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267887/ERR267887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267887/ERR267887_2.fastq.gz 347eee0012f9730132e622e4540c34ca;e72c421ae0f0e27a016a0738b7fb9835 1930003791;1943362197 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 2735619 ERR267888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267888/ERR267888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267888/ERR267888_2.fastq.gz b0a289697c8782953aa51f8cc799abb5;164cbcfac42d7fa06752a214a0111db6 229590866;229912246 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 21079271 ERR267889 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267889/ERR267889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267889/ERR267889_2.fastq.gz 244111d874b96f201f4d082276119ca6;b41e5e7198d1a5abe650fd263f70bf72 1765487907;1781092689 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGa unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 185927902 ERR267946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267946/ERR267946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267946/ERR267946_2.fastq.gz ece835101b328a3c8d790550b2cdf160;b384adfd0f31aa3545820153a893d28d 15379169897;15623528255 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGb unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 184471049 ERR267947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267947/ERR267947_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267947/ERR267947_2.fastq.gz b9d924fdc25fc5715e59dd91c024ac3f;0d02cd3360fae22f301606b635a0bed6 15266226256;15543023042 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGc unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 182797326 ERR267948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267948/ERR267948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267948/ERR267948_2.fastq.gz b3a087448a697d43ddbe8fa5cc091b0f;d12fdfee776624ccc40e2341209836c2 15103634727;15480348389 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182904 ENA PRJEB1877 ERS241540 M-0182904_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 2989143 ERR267890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267890/ERR267890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267890/ERR267890_2.fastq.gz 445fab75691303f0339cd01546da1c76;ec1900be1f117d7e477fdb6cbb1c9d8b 244968099;246589552 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182904 ENA PRJEB1877 ERS241540 M-0182904_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 26117949 ERR267891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267891/ERR267891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267891/ERR267891_2.fastq.gz 02876c018ad42d6fcee62367d4e525f1;e422b1fe00cfc01dc87cd8056b75eb36 2151438116;2185492455 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 3668117 ERR267892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267892/ERR267892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267892/ERR267892_2.fastq.gz 8c08b49d625d69aff9eb54492becef15;a97b38e64e277814b261c3ab9c1fbb0a 305540236;307572765 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 25647566 ERR267893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267893/ERR267893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267893/ERR267893_2.fastq.gz df6725e111e1e5fdb8ac7622953bed38;118dc8dcf2460d29ac51e48d17465cda 2114515840;2127711956 -Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_UDGa unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 230503850 ERR267949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267949/ERR267949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267949/ERR267949_2.fastq.gz e95ecc8d2925e391c916e78ac4ff9327;d48990914f66b8c2627a4d54129d7cfa 19533109582;19955351988 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177512 ENA PRJEB1877 ERS241542 KM177512_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 605115 ERR267894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267894/ERR267894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267894/ERR267894_2.fastq.gz 334ce4cd0e46500cf0ce621be10e7c18;4acdc225b33876e58e44886dc45d5fcf 57351140;59812358 -Yoshida2013 2013 10.7554/eLife.00731.002 KM177512 ENA PRJEB1877 ERS241542 KM177512_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 24302979 ERR267895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267895/ERR267895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267895/ERR267895_2.fastq.gz 7f72a897480e53c7de3ce4297c1a8699;09bc02561f049d3ff76c6bec061f850c 2086606314;2145135674 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 SINGLE WGS 26165442 ERR299534 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299534/ERR299534.fastq.gz 36bdb030d459bac95d975d7658c2f3aa 1836152202 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 171213802 ERR299535 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299535/ERR299535.fastq.gz 07cada140d3b162b2766c36fa2b952cf 11296524527 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 187350343 ERR299536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299536/ERR299536.fastq.gz d54d5d91a842184f0ee9585d515033b0 13140509343 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 184775365 ERR299537 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299537/ERR299537.fastq.gz 55c9c1cbbb3c079770d51952bbc151c3 12873399419 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 558444701 ERR299538 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299538/ERR299538.fastq.gz 26ed6d92f5f424cddf6d9f133b8b50b4 40756500194 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 119877253 ERR299565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299565/ERR299565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299565/ERR299565_2.fastq.gz 925482cbb9010b37da08473ce801678d;2a097e2e8effdf5c4c5255571cae92ac 9556153452;9560076900 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 113345623 ERR299566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299566/ERR299566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299566/ERR299566_2.fastq.gz fffeb341d12209a40f274d62e9f92583;7278f72d7cef3991c677e600e6a8ea2f 8566286907;6899802530 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 116158901 ERR299567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299567/ERR299567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299567/ERR299567_2.fastq.gz 1f3227c732acc0cd54693e4f94fbb554;2d8c7a7bfc0ab80e2075dce1e8ec2c5f 9310774839;9152409627 -Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 106937268 ERR299568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299568/ERR299568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299568/ERR299568_2.fastq.gz 2e66ad93ba6e668824d4043093eac81a;a213eb9a98eff6e619e7c28f86c61a4f 8614051515;8421486701 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 SINGLE WGS 13611041 ERR299539 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299539/ERR299539.fastq.gz ce2745894f466b3ec6e89c04e00f7d02 1006295094 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 15381433 ERR299540 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299540/ERR299540.fastq.gz fa45bbd9a1dccb34ae80b7709ab38b6f 975929860 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 16294978 ERR299541 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299541/ERR299541.fastq.gz e34c969e83d72adfd653ce848cc566bc 1101271812 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 16098387 ERR299542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299542/ERR299542.fastq.gz 85718168a6d2fd6583537c53885d1099 1080506435 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 47339095 ERR299543 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299543/ERR299543.fastq.gz 5ffa2bbc74ec4c32736fef619cdb703d 3335778828 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 81131710 ERR299569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299569/ERR299569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299569/ERR299569_2.fastq.gz 02c9519e646d78abe0a803556dc91d25;d75d9dc1ded92eff5305e38857d549f8 6756547236;6741206402 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 77372398 ERR299570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299570/ERR299570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299570/ERR299570_2.fastq.gz 5c161ed57cd3b5b3c032130fd13329eb;c4d65721941f2cab3fd3ebda56108853 6065297164;4842253998 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 78989199 ERR299571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299571/ERR299571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299571/ERR299571_2.fastq.gz d24ec11eb9b2493a5de5d67c0dfd19e8;db86580476788fb58b35ae3535a3cf82 6625841873;6468058758 -Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 72414915 ERR299573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299573/ERR299573_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299573/ERR299573_2.fastq.gz ff1eaafb674662a455962c293004594e;d8674d8e2a8a4c5e41619d818f768ebb 6105566369;5927827574 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACTGCG double Unknown none Illumina HiSeq 2000 SINGLE WGS 16307416 ERR299544 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299544/ERR299544.fastq.gz e71fb8ca29ae790c8c86c67205673705 1207694792 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 SINGLE WGS 29706947 ERR299545 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299545/ERR299545.fastq.gz f62543176606b5bcafa4fb2eb4b91d01 2249333488 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 SINGLE WGS 33187624 ERR299546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299546/ERR299546.fastq.gz 27b83f9c1a9f423766c82289a5106f41 2581258227 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 SINGLE WGS 48234989 ERR299547 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299547/ERR299547.fastq.gz 5377aa6f0e485f1ad43a52d53609c98b 3817014009 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 SINGLE WGS 57085830 ERR299548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299548/ERR299548.fastq.gz c92fa12144bded932fab2351b4e43782 4628889798 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 PAIRED WGS 44360965 ERR299575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299575/ERR299575_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299575/ERR299575_2.fastq.gz fa86493c09d46339cba770391dcbc6eb;6acaae2ef85ed2b5a87209d60e2c29f6 3503502871;3532659991 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 PAIRED WGS 58557245 ERR299577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299577/ERR299577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299577/ERR299577_2.fastq.gz f9d42ace2fd63397cd247dc10e1cc2d9;117b5c7d4943cd56c6d039c919b4547d 4726147952;4776684573 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 PAIRED WGS 58482478 ERR299579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299579/ERR299579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299579/ERR299579_2.fastq.gz 9950b1dd641a6010beced51a42bdcfa4;73c79b75925b853fca52c4c717646e9e 4969061730;4972031930 -Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 PAIRED WGS 76736270 ERR299581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299581/ERR299581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299581/ERR299581_2.fastq.gz 0f0d25ecaf2192489215d842b81e0993;ff3020600f8dbe3cba9720a5d90e555f 6634890243;6650995352 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_TCGATG double Unknown none Illumina HiSeq 2000 SINGLE WGS 11975234 ERR299549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299549/ERR299549.fastq.gz fac9ec78cd31556e48da024a81c284a4 877267211 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 SINGLE WGS 21785243 ERR299550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299550/ERR299550.fastq.gz 3498068a78c661fa5b0e9970abe660e2 1654948150 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 SINGLE WGS 27947413 ERR299551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299551/ERR299551.fastq.gz 9282ae4424a1df4259528943f902a7d7 2129568576 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 SINGLE WGS 22494930 ERR299552 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299552/ERR299552.fastq.gz b7d0d175335a40389c9bc658ae47e470 1717875391 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 SINGLE WGS 36763033 ERR299553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299553/ERR299553.fastq.gz 731ccc614849af3aa7231fe97dc425f3 2925884259 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 SINGLE WGS 47242192 ERR299554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299554/ERR299554.fastq.gz b2958ccb335049ee27b4777c3aff8b31 3766596335 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 SINGLE WGS 36669518 ERR299555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299555/ERR299555.fastq.gz 9e28936d72c62ec43997d3ab326b7c11 2931129513 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 PAIRED WGS 59580343 ERR299583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299583/ERR299583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299583/ERR299583_2.fastq.gz 57d35ddab5d8db0306fcdcba6ce330d0;14e6f8638faff0f3669ebd4cb8f91f26 4779373550;4879673521 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 PAIRED WGS 76512368 ERR299585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299585/ERR299585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299585/ERR299585_2.fastq.gz a04f92fb58734f880065500bf69b5063;6a5cc2ff3ac8a7d89ec7d7252c0a68f2 6168004008;6301333164 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 PAIRED WGS 48396065 ERR299587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299587/ERR299587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299587/ERR299587_2.fastq.gz e8d3c3dbce52e2495efc7bd9fe3e26da;3eebd26ae7c3527eff219c5a74b439ee 3902844270;3979555699 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 PAIRED WGS 58939909 ERR299589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299589/ERR299589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299589/ERR299589_2.fastq.gz 4a8183c6db68d02c73b689795727494a;3991649f7474565408a915cb46f68d7a 5120450978;5157754965 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 PAIRED WGS 73605867 ERR299591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299591/ERR299591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299591/ERR299591_2.fastq.gz fc734fbceb53f03f6e51ca745a0e3c6e;e7f5d70ae4686ddb673deb0f162be53d 6417275656;6463265989 -Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 PAIRED WGS 43889574 ERR299593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299593/ERR299593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299593/ERR299593_2.fastq.gz b35b9bd7426372f0594bd418d6f9cb51;a51d770bfbc88c1534103e94e45a7b18 3821269072;3840508938 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 31878411 ERR299525 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299525/ERR299525.fastq.gz 6151db90c67e4d3773289d14322abc59 2422267698 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 25503170 ERR299526 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299526/ERR299526.fastq.gz f9120fb2c45625b292fed133884f3d0d 1946640872 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 23455560 ERR299527 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299527/ERR299527.fastq.gz d93cda08647ad2a32491220b713f2dc1 1741110643 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 52634762 ERR299528 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299528/ERR299528.fastq.gz 9ce5ffb471204977a8bdf5b8568b6c45 4166221829 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 44387509 ERR299529 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299529/ERR299529.fastq.gz 0423644c5fd38e5510902a89f49d8e04 3526789449 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 38194482 ERR299530 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299530/ERR299530.fastq.gz 68158c76dc5a1cda4a8924265de06053 2954222367 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 62566817 ERR299531 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299531/ERR299531.fastq.gz 521ce988e22cb0bd11dd7edd0a8418ef 4915368500 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 49363729 ERR299532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299532/ERR299532.fastq.gz 8702f1a399233cfd16b1d41fc550edac 3894970224 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 45980711 ERR299533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299533/ERR299533.fastq.gz a4610470fd25ee083b64271ff4726ffc 3531701287 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none Illumina HiSeq 2000 PAIRED WGS 94493411 ERR299559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299559/ERR299559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299559/ERR299559_2.fastq.gz a3f06f6e700aa3dff0c2ebf1dfe0b255;e3f92c572c74e722593e8692a9f0887b 7593375259;7850528903 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none Illumina HiSeq 2000 PAIRED WGS 74421224 ERR299560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299560/ERR299560_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299560/ERR299560_2.fastq.gz 9f1d90a48c3208c369c3d2f66e2c0810;9e1db267e4b86b2b58e5339a02e8fb18 6009572509;6214245318 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none Illumina HiSeq 2000 PAIRED WGS 63138115 ERR299561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299561/ERR299561_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299561/ERR299561_2.fastq.gz 92c6422ae5ba175f30cfb0cdef561c1b;bedec5e70435d88a778c1ed1d49f4e7e 4985135858;5146643364 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none Illumina HiSeq 2000 PAIRED WGS 71655448 ERR299562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299562/ERR299562_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299562/ERR299562_2.fastq.gz 22e12a5b28c0819928f85a69f3215b39;f64ee21a44f3f7640def7f9c2d1426aa 6225046072;6178935749 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none Illumina HiSeq 2000 PAIRED WGS 52195993 ERR299563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299563/ERR299563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299563/ERR299563_2.fastq.gz 3f58e515dc594c0bc44ea47219de8149;b66225770e13f59f1c919f2b0d2f4407 4554269692;4523420094 -Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none Illumina HiSeq 2000 PAIRED WGS 48026604 ERR299564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299564/ERR299564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299564/ERR299564_2.fastq.gz eb35fc09381a22971351b8c481561e1c;5b1749be02e1ba32ba500fddd10059e0 4095522487;4049441181 -Fotakis2020 2020 10.1098/rstb.2019.0584 SK92 ENA PRJEB37995 ERS5113011 SK92_calculus double KAPA HiFi Uracil+ none BGISEQ-500 PAIRED WGS 337961062 ERR8050978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR805/008/ERR8050978/ERR8050978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR805/008/ERR8050978/ERR8050978_2.fastq.gz 8c10df2f77ac64f793ce8379a719d5e1;88e6a279e352143955b3e1b307709379 6899063594;6988901592 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 12048333 ERR2503176 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/006/ERR2503176/ERR2503176.fastq.gz 4e2432b43e5434ff1f545287ddba8394 515681762 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 43644594 ERR2503177 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/007/ERR2503177/ERR2503177.fastq.gz b5b493f9144451311b5d69447a5e8a6f 1417023412 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 11035770 ERR2503178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/008/ERR2503178/ERR2503178.fastq.gz fcaa4f97ebe69300defadfb2890ec724 386725015 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 156347797 ERR2503180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/000/ERR2503180/ERR2503180.fastq.gz 7d005882c277a09574d6fcde6a1c40ca 6842169930 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 163912495 ERR2503182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/002/ERR2503182/ERR2503182.fastq.gz 70cad2ec9e983129d6b58ed9642694af 7062039622 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 8607756 ERR2503179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/009/ERR2503179/ERR2503179.fastq.gz 9b68b98d82e457a058e817dea8317277 343724760 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 67257702 ERR2503181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/001/ERR2503181/ERR2503181.fastq.gz 9a5c40719b75c9ad846f428324bdea86 2770299480 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 72213653 ERR2503183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/003/ERR2503183/ERR2503183.fastq.gz 563e330190e310d0d062b044d02ba19c 2954704519 -Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473747 S5-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8978974 SRR957742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957742/SRR957742.fastq.gz b7c620b8ee165c08bee204529341ca5b 690614774 -Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473746 S6-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8999409 SRR957743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957743/SRR957743.fastq.gz 375e6b988eeb02cd56bdc861f4225b7f 703180372 -Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473748 S7-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 10187301 SRR957744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957744/SRR957744.fastq.gz c26d00cc0bf3b30de1ab4e6e199dcf0d 792532808 -Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473749 S8-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 10087890 SRR957745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957745/SRR957745.fastq.gz 1618b64b43195caa34c75dcf7b6c4c1c 791508690 -Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473750 S9-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8790145 SRR957746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957746/SRR957746.fastq.gz ed6eb0036191e98d4394d8588f79e0fd 599757007 -Devault2014 2014 10.1056/NEJMoa1308663 3090.13 SRA PRJNA219007 SRS480102 unspecified double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx SINGLE Targeted-Capture 172138676 SRR981225 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR981/SRR981225/SRR981225.fastq.gz 3a9de36529dc3379bd88503a76be5229 9095823939 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630b double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 1675402 ERR4374948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374948/ERR4374948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374948/ERR4374948_2.fastq.gz 926be06d766f617d530dd86c2c923a98;ef3b1912569503c4bec4393c467af101 107051806;105518845 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG1 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 22570691 ERR4375144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4375144/ERR4375144.fastq.gz bc31466e2ba83f27902b3e517bf739b3 785130427 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG2 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 27168496 ERR4383828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/008/ERR4383828/ERR4383828.fastq.gz 41ea60645b38e218d841674673dbfb47 962482754 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG3 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 25875319 ERR4383829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4383829/ERR4383829.fastq.gz cabe84183a942517ed31bd06f815d7f0 917944806 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 2920994 ERR4374011 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4374011/ERR4374011_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4374011/ERR4374011_2.fastq.gz e7ec3c7fb29e40d16710081d2feb8994;933b05c122f2c4899b7a0a470d7533fb 223979315;224820846 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_1 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 7498748 ERR4386594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/004/ERR4386594/ERR4386594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/004/ERR4386594/ERR4386594_2.fastq.gz 4c1532173ff5167f5f11722a51266c7e;882cf017a4d2ecba66596d28f5b098a8 470376358;513240544 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 2094918 ERR4388102 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/002/ERR4388102/ERR4388102_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/002/ERR4388102/ERR4388102_2.fastq.gz b3a7f685a18bcc3e7ab40d0511400adc;7bb00d39f98a28f5a3fb619426a3696f 74381752;81080489 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_4 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 2043769 ERR4388107 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4388107/ERR4388107_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4388107/ERR4388107_2.fastq.gz 588ffe4bca41e2c72cca79959ca06ffd;266ffb4a7ce4c2d4f31343e7654ded18 73500339;86160084 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_2 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 68309897 ERR4388231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/001/ERR4388231/ERR4388231_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/001/ERR4388231/ERR4388231_2.fastq.gz acece4818ab416324da0cf63402b0a12;3c0efafafecda2de2e1ea5966546b5f5 2507959022;2979964842 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_5 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 85981168 ERR4388236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/006/ERR4388236/ERR4388236_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/006/ERR4388236/ERR4388236_2.fastq.gz 66d091524a34f078c98572d36f533f02;0306df7f63723b81354b84658d7ca86b 3787231452;3997582586 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_1 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 1151423 ERR4384927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4384927/ERR4384927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4384927/ERR4384927_2.fastq.gz c74c1c0c0a2ed8599bd6d461a2b7c633;f94e0d0abbf5d0cdfa025950450ece20 75049432;86890431 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_2 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 3669179 ERR4385800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/000/ERR4385800/ERR4385800_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/000/ERR4385800/ERR4385800_2.fastq.gz 102a24929948a9c8a36fd97bc413a1db;ab3352a7943ac95861386137174be48b 232629449;265766157 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 12607106 ERR4385809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4385809/ERR4385809_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4385809/ERR4385809_2.fastq.gz 6f41a2eb226ae091f5423fdc98391b04;96d6ba2c095cba635fdfff04a5963bc3 794112413;899207544 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_4 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 72657115 ERR4386569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4386569/ERR4386569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4386569/ERR4386569_2.fastq.gz e7f72ba102c6ad019068109dc3cb6d19;b0ed5a76e625b70479a02af4e35a6042 2811157094;3327301183 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 3702377 ERR4374008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374008/ERR4374008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374008/ERR4374008_2.fastq.gz 6c48b43d0690b87dc343c185eb95d85a;38f5f85d17cb6dc960e3fb88f3856b11 302008916;300798534 -Philips2020 2020 10.1186/s12864-020-06810-9 PCA0088 SRA PRJNA354503 SRS1815293 PCA0088 double Phusion HS II DNA none Illumina Genome Analyzer II SINGLE WGS 5639903 SRR5047063 fastq_all ftp.sra.ebi.ac.uk/vol1/srr/SRR504/003/SRR5047063 5ffd013579caedf94ec5832b4c058d1c 365310448 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935826 P328 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 10336908 ERR4337434 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337434/ERR4337434_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337434/ERR4337434_2.fastq.gz 284efb8b6a46b76777a50e61c33f2b09;e71f2db328134c68a98ea10cbe4160b3 942776437;1028350019 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935827 P328a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 15102369 ERR4337440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/000/ERR4337440/ERR4337440_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/000/ERR4337440/ERR4337440_2.fastq.gz ddba178303dbe1ea489643a574fabd68;179fa2bfec48cf6ee1fcf97de7af9c22 534143849;621641602 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935828 P328b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 12174316 ERR4337442 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/002/ERR4337442/ERR4337442_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/002/ERR4337442/ERR4337442_2.fastq.gz 90771d01f54f5715d62b49125c8ee198;3b303b3695cb69a56cd40aaae99b8ce5 428229426;504951872 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935829 P328c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 9459770 ERR4337443 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/003/ERR4337443/ERR4337443_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/003/ERR4337443/ERR4337443_2.fastq.gz 0929ac9c8fd489eba1b922de6a19cbd6;52dd07fc7b9ccb24b994fe99793f6c96 366972580;377889092 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935830 P328d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 14049991 ERR4337444 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337444/ERR4337444_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337444/ERR4337444_2.fastq.gz ad71f4ab53497aa43afc21b198d64d15;ca53c1a9c335a74ede9d7dbb73ddce0f 500766718;583720483 -Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935831 P328e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 13671620 ERR4337445 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/005/ERR4337445/ERR4337445_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/005/ERR4337445/ERR4337445_2.fastq.gz ebf43f0511bd08a56ddc8f6b7032e0a7;c43f29a6f7b439b8b60ae85e7532052f 485649591;557461094 -Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563413 121-A1 double Unknown none Illumina MiSeq PAIRED WGS 14853214 ERR651008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651008/ERR651008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651008/ERR651008_2.fastq.gz b34177fcc234de9eb2fc98d45159afc6;22efd6b33c1f2be7989107dc285b3fc0 1627319356;1741320543 -Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563414 121-B1 double Unknown none Illumina MiSeq PAIRED WGS 1720137 ERR651009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651009/ERR651009_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651009/ERR651009_2.fastq.gz 4538c2ac9c0629e0abcaee7e5e4cf6df;4ee471a4d9ccb7b6eaa85a38993e565e 270608654;298713013 -Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563415 121-B2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 31660130 ERR651010 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651010/ERR651010_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651010/ERR651010_2.fastq.gz 7f89a37f15e9e0ec8cc34beb8b0ea904;cde1c9f16b879ac0437fa457f32ad18d 4160674077;4392757994 -Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563404 68-A1 double Unknown none Illumina MiSeq PAIRED WGS 5541400 ERR650569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650569/ERR650569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650569/ERR650569_2.fastq.gz 3d28ba951756b70d3fa3758644306215;febf339634d83725ce766c800dc484ac 678090742;744766268 -Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563405 68-B1 double Unknown none Illumina MiSeq PAIRED WGS 19138733 ERR651000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651000/ERR651000_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651000/ERR651000_2.fastq.gz a26ec71998c25053926adb32c15b187d;ac67a0bf1801d5a0ddaa2eb5e979a3d0 3501230830;3683302755 -Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563406 68-C1 double Unknown none Illumina MiSeq PAIRED WGS 1478638 ERR651001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651001/ERR651001_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651001/ERR651001_2.fastq.gz 2f2c0ebe0402631231438de0866b1221;1c5267474b9e7075a3f1f79b16fab4ff 239084220;259841480 -Kay2015 2015 10.1038/ncomms7717 body_78 ENA PRJEB7454 ERS563407 78-A1 double Unknown none Illumina MiSeq PAIRED WGS 17448828 ERR651002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651002/ERR651002_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651002/ERR651002_2.fastq.gz ab32428aa0643f9b75294d8587b33e6a;a6b0d2b10aeb163d45791cdb7092342c 2414784347;3066864451 -Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563385 28-A1 double Unknown none Illumina MiSeq PAIRED WGS 22262125 ERR650981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650981/ERR650981_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650981/ERR650981_2.fastq.gz 1eb472b27012f9ee3fefc5b3dae67767;4e88f36a03168203dae85340e5c6b111 3412969926;3679284284 -Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563386 28-B1 double Unknown none Illumina MiSeq PAIRED WGS 1757509 ERR650982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650982/ERR650982_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650982/ERR650982_2.fastq.gz 7b9810ca55ca564e82ee2ac0623ddf12;c791b19b954a8ba21d74de0f707f62bc 270858211;294912723 -Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563387 28-B2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 36081076 ERR650983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650983/ERR650983_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650983/ERR650983_2.fastq.gz b102410534687a47908d84095862866b;216f198cb2629ff6bda822d1a17ad2e0 4755814803;4803862805 -Kay2015 2015 10.1038/ncomms7717 body_25 ENA PRJEB7454 ERS563382 25-A1 double Unknown none Illumina MiSeq PAIRED WGS 1736006 ERR650978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650978/ERR650978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650978/ERR650978_2.fastq.gz 4f2d65e75a2646105a5d867c5faa4254;00c7d1a29999597f08281e6daeb29d1b 270685022;295684044 -Kay2015 2015 10.1038/ncomms7717 body_25 ENA PRJEB7454 ERS563383 25-A2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 61847101 ERR650979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650979/ERR650979_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650979/ERR650979_2.fastq.gz 618726b0208d73e502407163ce4e0e1d;d5bf4d4624287ca99d6c041c5b719481 8070107440;8125646876 -Kay2015 2015 10.1038/ncomms7717 body_80 ENA PRJEB7454 ERS563408 80-A1 double Unknown none Illumina MiSeq PAIRED WGS 14425334 ERR651003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651003/ERR651003_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651003/ERR651003_2.fastq.gz 584a371369da2ac6fdcc024b13733f61;38574be7e239e0bc06ecde7838ca6801 2113554397;2504491380 -Kay2015 2015 10.1038/ncomms7717 body_23 ENA PRJEB7454 ERS563378 23-A1 double Unknown none Illumina MiSeq PAIRED WGS 1316550 ERR650974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650974/ERR650974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650974/ERR650974_2.fastq.gz 217405c1701c28fcaacbfabbfce86700;cd308f5b88f7fc3791e49a617b21214f 168331723;176867990 -Kay2015 2015 10.1038/ncomms7717 body_23 ENA PRJEB7454 ERS563379 23-A2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 40656814 ERR650975 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650975/ERR650975_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650975/ERR650975_2.fastq.gz 5ebc21d291c5eff4b428d4f0ae9bed98;ba7665251a6ff4b968f82820cb6870b7 5137244720;5296192874 -Kay2015 2015 10.1038/ncomms7717 body_92 ENA PRJEB7454 ERS563409 92-A1 double Unknown none Illumina MiSeq PAIRED WGS 20084713 ERR651004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_2.fastq.gz 3f07d29738185963f380f637b9b93065;0d96c823b7998af0b2165fe46b7e542e 2984512816;3476815638 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514388 LP05 double AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 9264910 SRR1048648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048648/SRR1048648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048648/SRR1048648_2.fastq.gz 738da4ab4145efa33209ebbfd1002b7f;6004bcf2e95b6f88212c693aeba08969 515051648;513247679 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514389 LP05U double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 71834085 SRR1048652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048652/SRR1048652_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048652/SRR1048652_2.fastq.gz 269f02d407a4d93a6a5b550268f66a75;e19a9799b49332448bb1b9273d5f429a 3933582727;3854433211 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514393 LP12a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 33711849 SRR1048658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048658/SRR1048658_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048658/SRR1048658_2.fastq.gz 3c87a176385c4f98305f06bf100103fd;80959490f6f5e6644b0316486073c163 1825650020;1801855391 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514395 LP12b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 46350179 SRR1048660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048660/SRR1048660_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048660/SRR1048660_2.fastq.gz 3d87171374f01f85ea78761cb9f01890;09009be49dce77faa7990c5e786409d4 2519289735;2472095014 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514397 LP12b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 32642754 SRR1048824 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048824/SRR1048824_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048824/SRR1048824_2.fastq.gz 3fb8e63f3fe5ae035290776bc9ef171f;0cbedd9adb3c74aa47976b3bab63c76b 1747841549;1729011882 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514398 LP14b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 2458378 SRR1048825 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048825/SRR1048825_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048825/SRR1048825_2.fastq.gz 1e7a353b6ecf2dd626ad114cec01d67b;bba17081894ba6e0601d8b58285c2fbe 134559139;133904277 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514399 LP15a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 17062341 SRR1048827 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048827/SRR1048827_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048827/SRR1048827_2.fastq.gz dd8e211d0c691989a797c923ea11ff8b;645c5d3fa453529b1c928b2f86d4bd65 919032570;916143810 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514400 LP15b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 14101733 SRR1048828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048828/SRR1048828_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048828/SRR1048828_2.fastq.gz 037ee68ba2cd2934c4797bbb48d5c464;633cb3d21085b81680b7891ad88c6470 765557596;752905932 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514401 LP16a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11803310 SRR1048830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048830/SRR1048830_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048830/SRR1048830_2.fastq.gz 6ee26e6fd9832b9d0a145e7f182ccb74;c56607efb6d6790e15132412af2528be 640989818;640407775 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514402 LP16b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 342880 SRR1048831 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048831/SRR1048831_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048831/SRR1048831_2.fastq.gz 09c0d79db38deaab23126321dbf66dac;97bd2c0c70ca5c89365f5c4f70947999 18607139;18424668 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514403 LP17a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 3501767 SRR1048832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048832/SRR1048832_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048832/SRR1048832_2.fastq.gz b34089c1a8d6ff24b1f0914346df486e;74ad0143ec8c9b5ef035fca11806df1b 191652014;190702779 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514404 LP17b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 3943496 SRR1048834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048834/SRR1048834_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048834/SRR1048834_2.fastq.gz d2913baafd1c38cb0de78466ef3918e4;6a1fedf1ceb2bc56db9511068037dba1 215941931;214245525 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514423 LP29_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8384630 SRR1048860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048860/SRR1048860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048860/SRR1048860_2.fastq.gz 3d47d425ca47654a091c0d2313e536f4;0a74b796367694c669219cd37592f269 439887926;435431330 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514423 LP29_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 18432613 SRR1048889 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048889/SRR1048889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048889/SRR1048889_2.fastq.gz d49b3c5501aeeaee8c700a944887d1ea;cfff98e2a1d386e950a0f19c0341ce37 931347105;933490878 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514424 LP30_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 9548184 SRR1048873 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048873/SRR1048873_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048873/SRR1048873_2.fastq.gz 81d9cb0163ecaf0d1a6f9a6057079bf4;8d8014c472f5358f0e2e1746cf17299f 494563649;493033132 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514424 LP30_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 19803183 SRR1048890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048890/SRR1048890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048890/SRR1048890_2.fastq.gz 0ac3054371dc152d85e16ba9d24bcd5f;7203b1236aaa9dc85e262143e2120a84 989815335;1011301712 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514425 LP31_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 6555618 SRR1048874 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048874/SRR1048874_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048874/SRR1048874_2.fastq.gz 9a8c0d9a2eef2e178dd2c6c91d853bb6;b07207b7c34cc50e8fcb164f0c442e73 345474517;336587353 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514425 LP31_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 18521072 SRR1048891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048891/SRR1048891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048891/SRR1048891_2.fastq.gz 77cb5c2cc65ad8f83388c85df8f35c6f;32fc803ef9df93e6b1586e89ca720592 934839782;927683186 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514426 LP32_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 10615750 SRR1048877 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048877/SRR1048877_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048877/SRR1048877_2.fastq.gz bd88347fd253e9d3123aecec0f0b019c;79970aa6bba0409bfdd340dfe4782d6c 557046272;548620748 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514426 LP32_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 15406110 SRR1048892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048892/SRR1048892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048892/SRR1048892_2.fastq.gz b79b119436097bee8d1c698dbde4b582;19289ed7689a66c19e27e44c6e1a4573 775078820;780448744 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514427 LP35_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 7822702 SRR1048878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048878/SRR1048878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048878/SRR1048878_2.fastq.gz 27633a877263815b69bdad790ca5d3db;ceb677f40d66af1ac0f63531e654435d 415422070;408673301 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514427 LP35_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11879769 SRR1048893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048893/SRR1048893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048893/SRR1048893_2.fastq.gz b5a239e16825659297434d940b3c82c2;03fa123fc48e6778f9d6ed3e14368ac8 607214726;604919870 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514429 LP36_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 7469850 SRR1048883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048883/SRR1048883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048883/SRR1048883_2.fastq.gz d2f863e54e5810372ea7a270bdf40f9e;663c95be57ab526ab25dda212207aeb3 392354535;386093532 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514429 LP36_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 16850293 SRR1049476 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1049476/SRR1049476_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1049476/SRR1049476_2.fastq.gz 73f8d485e22e2e253b3313c92268334f;8b85140e9f5ade70ea13d0d8fd40f441 845270872;846603009 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514430 LP37_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8129308 SRR1048884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048884/SRR1048884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048884/SRR1048884_2.fastq.gz 81eeda56405648220fbd39a62f697334;b2822a3745d130f5200bbe1e6f3fc668 427035856;419310539 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514430 LP37_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 24960979 SRR1048895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048895/SRR1048895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048895/SRR1048895_2.fastq.gz 0f770291b745a90b6f614af83539b6b2;0ea5202244bf4642723bbf17fbfd2d33 1241726045;1239974850 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514431 LP38_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11245180 SRR1048887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048887/SRR1048887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048887/SRR1048887_2.fastq.gz 4486508cbbb03c8cc4a75f7e007141ef;2d9587add98ad1ccdd54f359637439f6 589185452;583337627 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514431 LP38_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 22002992 SRR1048897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048897/SRR1048897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048897/SRR1048897_2.fastq.gz f498d2d076dce643bd89fe02f817d95a;c4122f71741a2c142197f6c0d7555eac 1104867268;1115838759 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514435 LP29b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 311986 SRR1048899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048899/SRR1048899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048899/SRR1048899_2.fastq.gz 2c6de6f13082bc89d7ef1d84d78afd56;93a28401b9a61415d994195f90f0b601 15342223;15664237 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514436 LP30b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 328263 SRR1048900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048900/SRR1048900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048900/SRR1048900_2.fastq.gz 99622a85f3069a39f84b079252561619;a6185486a6448feda62fef8ed6f7a0f6 15788938;16400718 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514437 LP31b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 279475 SRR1048901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048901/SRR1048901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048901/SRR1048901_2.fastq.gz 93efc49537c804e1ed7a1dc1fd4c7583;b9707c170f935105da97f553457ff988 13645486;13761235 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514438 LP32b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 295991 SRR1048902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048902/SRR1048902_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048902/SRR1048902_2.fastq.gz 45500519a42a62caa10af7f1beadca9d;94f7cd46f098274276172cb1a633fcab 14573520;14986154 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514439 LP35b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 349048 SRR1048903 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048903/SRR1048903_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048903/SRR1048903_2.fastq.gz a736fab3d41b9e4c59a8a94d891f0f45;5e72fe3395c044f51f9131bf7a6ac640 17026111;17500539 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514440 LP36b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 308242 SRR1048904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048904/SRR1048904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048904/SRR1048904_2.fastq.gz b61c15225a83d6cf000f11945f617a7d;ccf227974d5c79a520394485ef123ccd 15057184;15256103 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514441 LP37b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 298178 SRR1048905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048905/SRR1048905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048905/SRR1048905_2.fastq.gz 41aeeac775dbd0d75bafeeb9db3bb651;1dd861310793f02c6f07b28e8c8f07e6 14225303;14375253 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514442 LP38b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 390426 SRR1048906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1048906/SRR1048906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1048906/SRR1048906_2.fastq.gz cb39ea598ed8b1254c6ccd5b3030425c;b28fa45d565b30a646b4ef744a5cc6ca 19021643;19735091 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514507 LP55 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 600094 SRR1048911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048911/SRR1048911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048911/SRR1048911_2.fastq.gz 076ae832ced00b05115e640ddabab23d;56f9d1ea30a1deac51850f2e1504632c 29074560;29647819 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514506 LP53 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 608503 SRR1048910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048910/SRR1048910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048910/SRR1048910_2.fastq.gz 6ca326d20554ec24c960fe562dac9ce7;55c7e058ff92cbadac69cb08f0f45335 28972125;29329377 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514505 LP51 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 494854 SRR1048909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048909/SRR1048909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048909/SRR1048909_2.fastq.gz eca63642ab4407cdecb56e710b56d5ea;fd04176739e6e393dd063029f6c9c6da 24143702;25528106 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514444 LP49 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 618336 SRR1048908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048908/SRR1048908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048908/SRR1048908_2.fastq.gz cf04108c2b7fc1252f58bc753050a30e;c63849a9adefba58c60c1ee53e0543ea 30242109;30611196 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514391 LP07 double AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 6924154 SRR1048653 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048653/SRR1048653_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048653/SRR1048653_2.fastq.gz de574469b89066b9044de84608b9390c;b70330498ab8c4471f3c9ce8fc8f3c44 383016697;383992756 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514392 LP07U double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 8345921 SRR1048655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048655/SRR1048655_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048655/SRR1048655_2.fastq.gz 1d39e1610f57e4110ab1985badb3fc25;84156889fb887f751660deddda6038c0 455354309;454724543 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514432 LP39_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8412498 SRR1048888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048888/SRR1048888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048888/SRR1048888_2.fastq.gz 8747b60981085c48f403cc4c095f31d2;728174b17ef814fe0f80de3e83da48ce 445959648;442951386 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514432 LP39_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 17718231 SRR1048898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048898/SRR1048898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048898/SRR1048898_2.fastq.gz fafda2ebeebd7779e8a39c1826ab8141;cafaec4b80116240d77ae69cef16cafc 914341566;930528598 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514443 LP39b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 314854 SRR1048907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048907/SRR1048907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048907/SRR1048907_2.fastq.gz 6987d61d22fe27f06c60b3841fdb81f9;be661ff69d18b5120ae27c6a3ada9766 15447233;15582845 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514508 LP57 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 597516 SRR1048912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048912/SRR1048912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048912/SRR1048912_2.fastq.gz 55eae009521077c05ef9146118af0147;261eee9b96ec2328b76c9ff5ca730f80 29112666;29795658 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982024 CHS119_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 18544593 ERR4494968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494968/ERR4494968.fastq.gz 897ae8a19b07fea7a89fd3e3f9bc9b53 629129485 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982025 CHS119_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7853634 ERR4494969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494969/ERR4494969.fastq.gz a2f60689eea9a454cab7f7f2fd38df38 268727988 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982023 CHS119_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1354466 ERR4494970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494970/ERR4494970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494970/ERR4494970_2.fastq.gz cfd32515f6982804b1dc87a3e6576503;b56f1affbb9146dc3e0fc916d21fbc14 61543828;72970113 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982027 CHS119_ba_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 15053528 ERR4494971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494971/ERR4494971.fastq.gz 7427d28b900c421f46db0aa19708dfc4 517952256 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982028 CHS119_bb_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19621391 ERR4494972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494972/ERR4494972.fastq.gz b7f9ccaaf9be0a8736c9fddb034027bc 660663874 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982026 CHS119_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1012289 ERR4494973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494973/ERR4494973_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494973/ERR4494973_2.fastq.gz c58d221b0f6e88261ed4bf120fd42e35;9d05dd2cae9f08b3eecf3dabd145753a 45977766;53843896 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982029 CHS119_E1L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 14158896 ERR4494974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494974/ERR4494974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494974/ERR4494974_2.fastq.gz 7c6ec6fde27314d45db244bd58b74ea8;5516e5827bc8f7a2a634b582fdc025bb 413726823;445684438 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982032 CHS119_E2L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17631128 ERR4494975 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494975/ERR4494975_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494975/ERR4494975_2.fastq.gz 20aaf81176d3b03d26bb65c0cb9afdf5;3a96841faa3d2654b92946b251f4ec8d 499581375;550318120 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982033 CHS119_E2L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4556164 ERR4494976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494976/ERR4494976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494976/ERR4494976_2.fastq.gz 35e2f66e64ae18debc1065563da198ef;78a7371aa475e2ffc0064dd24f110b11 133623665;145745445 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982034 CHS119_E2L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1663850 ERR4494977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494977/ERR4494977_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494977/ERR4494977_2.fastq.gz f7a29387b7074fb44453f0de35b686f4;b3515406a8303cc9e18bb6b14a8f22ba 48997038;52514789 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982035 CHS119_E2L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3737631 ERR4494978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494978/ERR4494978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494978/ERR4494978_2.fastq.gz 1da7d21a0508a1197cd8bebb470e762c;e02dd5ba000379b29b97c46aaeff3c18 111406815;116766235 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982036 CHS119_E3L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4588103 ERR4494979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494979/ERR4494979.fastq.gz 01b79a5571829a0add1a895c9abcfceb 161121391 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982037 CHS119_E3L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12491210 ERR4494980 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494980/ERR4494980.fastq.gz c81babe37881751bb1528d4bb87fd0bd 479418962 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982038 CHS119_E3L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3956358 ERR4494981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494981/ERR4494981.fastq.gz ef4468f581b9045e0703c9339fca4f24 136755211 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982039 CHS119_E3L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3393085 ERR4494982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494982/ERR4494982_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494982/ERR4494982_2.fastq.gz 5ee91be0228b2a60cf574a3062af3164;a5fdc31e7ad6bc68a0d0df33be739653 99592440;109358894 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982040 CHS119_E3L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5636105 ERR4494983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494983/ERR4494983_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494983/ERR4494983_2.fastq.gz 45cabe5104c6b5deba476ac0a63793a2;f83cb2d4a2de90b730de13f462169212 166239014;177686093 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982041 CHS119_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7222618 ERR4494984 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494984/ERR4494984.fastq.gz b40a393d204082df16692db07ec30910 271246781 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982042 CHS119_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8381899 ERR4494985 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494985/ERR4494985.fastq.gz c013acb4abc92f89e93fb00e8f58c6a2 322268109 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982043 CHS119_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5839129 ERR4494987 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494987/ERR4494987.fastq.gz 6aa8a2672773c004a21622009631bab9 222871816 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982044 CHS119_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7267651 ERR4494988 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494988/ERR4494988_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494988/ERR4494988_2.fastq.gz d98f5072c9742cd22155e6aa87935b75;7f8cd97f78a217ef3e961136c4a60d43 214842733;235433638 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982045 CHS119_E4L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13098014 ERR4494989 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494989/ERR4494989_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494989/ERR4494989_2.fastq.gz 894f60b0faf392b5d9e23a5d4e8f5e6b;23f9e140e7c863fdbd3952e618c2772a 385547540;422200009 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982046 CHS119_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2462843 ERR4494990 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494990/ERR4494990_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494990/ERR4494990_2.fastq.gz 29e3e6bce3c51aebc5e049fd1a398032;c8743ae367a169b10f012062e84929f1 71400417;79126223 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982047 CHS119_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11355240 ERR4494991 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494991/ERR4494991_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494991/ERR4494991_2.fastq.gz 892aa2b6d16b1c562f8dc9dcb2f70808;4c084553bc82a97a5d32be7967ff1560 328175706;360458178 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982048 CHS119_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2734077 ERR4494992 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494992/ERR4494992_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494992/ERR4494992_2.fastq.gz 8e1bb65e7a436ade59a0b0b1b45d8788;02fe2d9c3942d2bf7fa0d06b6447d3b6 78160190;83994103 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982049 CHS119_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1791983 ERR4494993 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494993/ERR4494993_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494993/ERR4494993_2.fastq.gz 1b7154ac83d1e56aed7e58e2971f9078;be2ec5529a9eba5e45df35754382125a 51877152;56770388 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982050 CHS119_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12546676 ERR4494994 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494994/ERR4494994_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494994/ERR4494994_2.fastq.gz e4f3fdf9e0f9d620c3c0a4b7944f9028;ef20b4e9be7379597e232a23b628054c 361974553;397422576 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982052 CHS119_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 12807483 ERR4494995 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494995/ERR4494995.fastq.gz 87705146d9529f5e89770e214371d6d5 478054123 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982051 CHS119_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 8337219 ERR4494996 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494996/ERR4494996.fastq.gz 275f6855870d09e23dc0e519e045e80f 325586100 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982054 KM14-7_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6718712 ERR4494997 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494997/ERR4494997.fastq.gz 9499548557a6f1401234595e13d4bae1 230666636 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982055 KM14-7_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5468926 ERR4494998 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494998/ERR4494998.fastq.gz 610de41f2ca1369e1cc1d6b58d9400ed 189639312 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982056 KM14-7_ac_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3747501 ERR4494999 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494999/ERR4494999.fastq.gz 71306af4541ffa42a7852a0afbffdf7c 131697857 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982053 KM14-7_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 3885617 ERR4495000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495000/ERR4495000_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495000/ERR4495000_2.fastq.gz b83895d7009f5bd0b2727289a0c29c5a;8f1385a1cd0ff5b2fcf8ec63edfc65b0 176259481;210605553 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982057 KM14-7_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 2363278 ERR4495001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495001/ERR4495001_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495001/ERR4495001_2.fastq.gz 69c87ba3a05c3e7046aed663dc93610f;af73fe846c961fdd90f30eb38b65070a 108473873;126443934 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982058 KM14-7_E1a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 16703377 ERR4495002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495002/ERR4495002_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495002/ERR4495002_2.fastq.gz 8fca9bb5d435c5c8c27fc5decf2a91bf;23eafbb2bcb8eead858bdb1525e57754 487285164;538788626 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982059 KM14-7_E2a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 782087 ERR4495003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495003/ERR4495003_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495003/ERR4495003_2.fastq.gz 435a69a9953ece2e36c019a6a93baa88;0d28620d0db97ba178b3ea85a5d03308 23321878;25168161 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982060 KM14-7_E2b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1715519 ERR4495004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495004/ERR4495004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495004/ERR4495004_2.fastq.gz d056acc791d6a539b3acd29e50b3e570;5706b6117967c5d992a9384b664ae045 51871657;53785864 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982061 KM14-7_E2L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3873153 ERR4495005 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495005/ERR4495005.fastq.gz c4bb61f5bf049861057eaef23678fb33 135091821 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982062 KM14-7_E2L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7642034 ERR4495006 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495006/ERR4495006.fastq.gz 951137b10e07c8dd6041f97e31c9c4a7 254727172 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982063 KM14-7_E2L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4438800 ERR4495007 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495007/ERR4495007.fastq.gz 1d3bcb3a290e411f9ac3cdbc902d843f 152637278 -Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982084 PD28_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3630293 ERR4495008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495008/ERR4495008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495008/ERR4495008_2.fastq.gz ff86e86f6420160dffb9cc617046fa9d;792c38130336aaab353760ca84d2e0fd 153699206;183355282 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982065 KM14-7_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8001677 ERR4495009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495009/ERR4495009_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495009/ERR4495009_2.fastq.gz 1147702b7edf5b6cc7a3e73170ee9707;d6ec126788ff2b0c97f5dd10d4a599a5 233519320;255614550 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982066 KM14-7_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17969549 ERR4495010 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495010/ERR4495010_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495010/ERR4495010_2.fastq.gz 66a6563ce7876acea38020006febb801;fe67815c956c7f27c6b0c7e3bf2554b5 524552560;573746558 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982067 KM14-7_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1722548 ERR4495011 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495011/ERR4495011_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495011/ERR4495011_2.fastq.gz 31c28fadf7ec224948f7c0b034aa8300;da600d4f8af8ef9d62cc1c4309b14df1 50226759;53622722 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982068 KM14-7_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2044012 ERR4495012 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495012/ERR4495012_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495012/ERR4495012_2.fastq.gz 0482550709b9e5b66cc22eeab33bc2e4;941d3bf30ebae031e96ecd76cc79b6cb 59626873;64037057 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982069 KM14-7_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2723532 ERR4495013 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495013/ERR4495013_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495013/ERR4495013_2.fastq.gz a61094f360f28f3585fc7a4ef21515c1;39a1ea6133744cb8aa2b7f1cb51b7f2e 79994510;87194220 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982070 KM14-7_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10762156 ERR4495014 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495014/ERR4495014_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495014/ERR4495014_2.fastq.gz a8a7b4274c1ba72268cad64ad77724a4;7b7122b630e25e71cdbb6e21e76a49ac 315579658;343023702 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982071 KM14-7_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10241941 ERR4495015 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495015/ERR4495015_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495015/ERR4495015_2.fastq.gz 44a14c0ac611540a0f486f910df14e24;3a1445bf24526a2a2b93f0e23222e8b4 300491183;328913835 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982072 KM14-7_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2248130 ERR4495016 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495016/ERR4495016_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495016/ERR4495016_2.fastq.gz 483c30b56c265b558963fc0170134845;72c7fd5a16fe6a4ee173bff9b245b157 67077523;69458891 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982073 KM14-7_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1334686 ERR4495017 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495017/ERR4495017_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495017/ERR4495017_2.fastq.gz c40dc6e58a72810d49ab39bfa0a92e93;d5ccc7c151ccc897d06db09f229432d5 39535291;42865512 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982074 KM14-7_E6L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 134760 ERR4495018 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495018/ERR4495018_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495018/ERR4495018_2.fastq.gz c36aeeb0d93939e7c019b18ed0ff8eae;8bc5623fae5e8325140bfe460f114f90 4123994;4560940 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982075 KM14-7_E6L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1841494 ERR4495019 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495019/ERR4495019_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495019/ERR4495019_2.fastq.gz c89d405bc17d4c2d9e7ead11b3df22d3;4f5fa0472451abb478e1211ff1f41f55 53636583;58191799 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982076 KM14-7_E6L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10318071 ERR4495020 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495020/ERR4495020_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495020/ERR4495020_2.fastq.gz c991786ff882786504e048d630960506;d0f69348c62d36fa5ed35e4a0498c04c 299680782;328221359 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982077 KM14-7_E6L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1709190 ERR4495021 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495021/ERR4495021_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495021/ERR4495021_2.fastq.gz 7ad922ff5190a927614c5766ea365d82;406c3aef25d02fe86374cc6901eaf14d 50079130;53917924 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982078 KM14-7_E6L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9001415 ERR4495022 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495022/ERR4495022_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495022/ERR4495022_2.fastq.gz 6eabad0d34f1b9b275ca2e5a6813cf63;20d7fd4d5314cdab1300b64267c47970 261810646;285592996 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982080 KM14-7_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 5844187 ERR4495023 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495023/ERR4495023.fastq.gz c7e132f3e31f9a368fb10b5918bad1b6 226140399 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982079 KM14-7_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2413040 ERR4495024 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495024/ERR4495024.fastq.gz 0d1af4fa8dcfa03ae90685918ab58d85 93918391 -Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982081 PD28_E1L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 32162506 ERR4495025 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495025/ERR4495025.fastq.gz 052df6ccc7a1e95fd721855756648a85 1198935441 -Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982082 PD28_E1L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 46064633 ERR4495026 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495026/ERR4495026.fastq.gz 83c7281b1f700859e6a35a80483425f6 1713566727 -Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982083 PD28_E1L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17219244 ERR4495027 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495027/ERR4495027.fastq.gz 2dd8d3c017cda72665cd53c01c4fb5d1 666617618 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982086 SJ219_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4134283 ERR4495028 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495028/ERR4495028.fastq.gz 64a1100e9955f8201641c4d117b55272 142866732 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982087 SJ219_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6983283 ERR4495029 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495029/ERR4495029.fastq.gz e031018b646c7a87d4b320fbe85190d9 257134672 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982085 SJ219_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1950098 ERR4495030 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495030/ERR4495030_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495030/ERR4495030_2.fastq.gz 7d481ca6578a9b1db1a25adc790863ba;78e1a78d7add867a9c935c528560e22b 84600777;101461871 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982089 SJ219_ba_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7345084 ERR4495031 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495031/ERR4495031.fastq.gz 52cd924973276d5b29d3199ea2646619 231781836 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982090 SJ219_bb_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7590544 ERR4495032 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495032/ERR4495032.fastq.gz 917a9bef942abda7977073c6dd3c9a10 264472200 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982088 SJ219_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1932354 ERR4495033 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495033/ERR4495033_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495033/ERR4495033_2.fastq.gz 838cf589b6f2b7287b23fa7843dd5432;5462c7087ff4550564f8392b8026107f 83750812;99285425 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982091 SJ219_E1a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 41641003 ERR4495034 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495034/ERR4495034.fastq.gz fa2bfef6f0e1b50fc78e900bad5fb448 1342087024 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982092 SJ219_E1b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2326655 ERR4495035 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495035/ERR4495035_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495035/ERR4495035_2.fastq.gz 96882b3ea60ca09a4ea3f297a0c1aef5;7d91ee74c60b4f96ba0509e5fad5e4f5 67850722;73050245 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982093 SJ219_E2a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2033564 ERR4495036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495036/ERR4495036_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495036/ERR4495036_2.fastq.gz 44375dea59fcffc3ec0732046d86014c;885fb57011755ddb0a98455e9b9eff08 59421464;63794496 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982094 SJ219_E2b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2828440 ERR4495037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495037/ERR4495037_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495037/ERR4495037_2.fastq.gz 1eac9067933728d55b886ee4e2b75df5;3db88903d9b99ebfa1800f084740924e 83047582;90121201 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982095 SJ219_E2c_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1849161 ERR4495038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495038/ERR4495038_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495038/ERR4495038_2.fastq.gz ba5625b8a2c22eace1501236b36646fa;969eac18c16bf7a4e4ca196027681134 53998954;58107252 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982096 SJ219_E3a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6171625 ERR4495039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495039/ERR4495039_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495039/ERR4495039_2.fastq.gz 412493e52edc7e699e98cbc755c72894;f133453f91f4c4e734a708a9ba98a1dd 181212049;200496717 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982097 SJ219_E3b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 14443974 ERR4495040 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495040/ERR4495040_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495040/ERR4495040_2.fastq.gz e42c7e801f99b7bcc81cec3c714c8128;9790453a2a4c2733b79e655a9546af74 422701745;466376356 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982098 SJ219_E3L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12304650 ERR4495041 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495041/ERR4495041.fastq.gz 8f2df6150a297d1e732003858dae3108 442806274 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982099 SJ219_E3L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8819404 ERR4495042 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495042/ERR4495042.fastq.gz 6d35f94e952629c45dedf51cf36bc7ee 305564182 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982100 SJ219_E3L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12319067 ERR4495043 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495043/ERR4495043.fastq.gz f090a143df7470c333d3e147bb6bff57 453781010 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982101 SJ219_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2435392 ERR4495044 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495044/ERR4495044_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495044/ERR4495044_2.fastq.gz afb320ca470906960035dd44b42f4ffc;cdd1ccc0e20876ffcbd5dff0ea0e5dac 71948855;78250635 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982102 SJ219_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 957 ERR4495045 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495045/ERR4495045_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495045/ERR4495045_2.fastq.gz 8ef9353717483f5dfa5bfa4930d81109;6bad7e2f0e602bed16679caf121f6869 25249;29992 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982103 SJ219_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2638629 ERR4495046 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495046/ERR4495046_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495046/ERR4495046_2.fastq.gz 18d64c3c9d0975c302b503e71fbe56a4;621233cd8166e8e41ad550e03a6044c6 78410505;86411888 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982104 SJ219_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3140357 ERR4495047 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495047/ERR4495047_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495047/ERR4495047_2.fastq.gz 1d4c141accb954598a3a467ec5bff209;5244841f45e4f60ce2641e81bb15983d 93039195;100420934 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982105 SJ219_E4L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6483928 ERR4495048 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495048/ERR4495048_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495048/ERR4495048_2.fastq.gz 975c6e65ea3ad5bdbbf90882ffeaf317;3ebde2847df870a1ff907b236984af87 190533295;208346724 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982106 SJ219_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10379191 ERR4495049 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495049/ERR4495049_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495049/ERR4495049_2.fastq.gz bcf93add557fd7dc2afc33ecba995cf1;6ef6aa2e0f19d2759358b12d74baa23c 308406121;332803590 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982107 SJ219_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2577305 ERR4495050 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495050/ERR4495050_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495050/ERR4495050_2.fastq.gz 76971fb71eade50fd3667ee3e5a1521d;3b7363a4531c8b5c9d43d1fa5916800d 76392643;82872027 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982108 SJ219_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4856270 ERR4495051 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495051/ERR4495051_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495051/ERR4495051_2.fastq.gz 896d191059ebe4b688f397786e4d3dbc;eda32425f88cb597fa141cd20b8d3317 144442467;158795227 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982109 SJ219_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3318660 ERR4495052 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495052/ERR4495052_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495052/ERR4495052_2.fastq.gz 833de69521aa4876df95b4419a4ba78d;a1587ad25bf7ff37df4eaf6cc91bf544 98810926;107534624 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982110 SJ219_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5692534 ERR4495098 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495098/ERR4495098_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495098/ERR4495098_2.fastq.gz 754fb271c57dcbf16ea73fb03c210cca;6549ee70784e2aeeaf98be2bef229c64 168039525;183135933 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982113 SJ219_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 3888293 ERR4495099 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495099/ERR4495099.fastq.gz 9687ef1e2c7f8e8e55e85f1cf675f572 148538604 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982112 SJ219_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3303778 ERR4495100 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495100/ERR4495100.fastq.gz 22aede18be4284f9954c34f34fd0d515 131319287 -Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982111 SJ219_E5L6_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7817537 ERR4495101 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495101/ERR4495101_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495101/ERR4495101_2.fastq.gz 8ef8b6b43eae64e297edb94193288264;57b5cfde61449b40a73119d3e18748cc 231636751;253964329 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982030 CHS119_E1L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2666880 ERR4495102 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495102/ERR4495102_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495102/ERR4495102_2.fastq.gz dd325033534c8bf9c49144f98ed23c54;d579a3b591a216d74bde0d3502290153 79155192;85990179 -Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982031 CHS119_E2L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20343352 ERR4495103 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495103/ERR4495103_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495103/ERR4495103_2.fastq.gz 5595c51393070c7eb1361e1f437ded26;2b19f80fb96efc9d7815c223fde47ee5 574767628;621774712 -Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982064 KM14-7_E3a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5868366 ERR4495104 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495104/ERR4495104_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495104/ERR4495104_2.fastq.gz e6f86e77a9d2fca8676df8eab61e8cec;25d40c9fd361e98a3f83f4ce96f8b1be 175408825;193189308 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942275 B0624 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 24398268 ERR1094787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094787/ERR1094787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094787/ERR1094787_2.fastq.gz 15b228f1f6e816d00b165e9b8677ed82;183ea7641cb8fc128b21c7011407eb52 2073374396;2104934249 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942266 A1141 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 294435 ERR1094778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094778/ERR1094778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094778/ERR1094778_2.fastq.gz 3ddfcf48d080d9ddc311a7fa5ac3c321;723002543630cfbb81ede88ffa7fb6ab 19217293;19737362 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942283 C0056 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 21790245 ERR1094795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094795/ERR1094795_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094795/ERR1094795_2.fastq.gz 56b9f99c0c1413f0479077afa6c58aaf;b2e8c5efa1053b64670f1fb80ed00861 1884405031;1896513127 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942284 C0057 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 19884835 ERR1094796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094796/ERR1094796_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094796/ERR1094796_2.fastq.gz 1eb1eba287d2e58b191b75dbe5aa950d;e65d6c52093d605b7286c283231a14e5 1710896646;1721437182 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942285 C0058 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 27481493 ERR1094797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094797/ERR1094797_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094797/ERR1094797_2.fastq.gz e23bc6695c4cef3c1bee9ed359beac5c;2fe36b6308daeac5c85cf16a707142e5 2378343725;2397406421 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942286 C0059 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 31004221 ERR1094798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094798/ERR1094798_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094798/ERR1094798_2.fastq.gz befebf2fd94aadb6bc92bf96f1213774;877430fbf17f9f9c527b1bf0db4a054b 2650871975;2605058846 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942287 C0360 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 19016942 ERR1094799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094799/ERR1094799_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094799/ERR1094799_2.fastq.gz 90d16ebd3dfcfc401cb89bf898746b07;d55b4a7d8c84a2ee802bd979aab9d64a 1597228112;1611945870 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942288 C0361 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 14930879 ERR1094800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094800/ERR1094800_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094800/ERR1094800_2.fastq.gz 30eac3a4a8bb6f7327beb259dee2f045;2d6138e921e6cd6a2207821cffea113d 1248148942;1257014466 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942289 C0362 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 38888 ERR1094801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094801/ERR1094801_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094801/ERR1094801_2.fastq.gz b5a59506f85fb5fee4be8dfb376b71d1;2b9e520031bfb60122edc402d659c0a0 3214553;3264921 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942290 C0363 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 39601058 ERR1094802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094802/ERR1094802_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094802/ERR1094802_2.fastq.gz 38a37682190325908066762c6fc335a4;952a694e1dc03b4a35bda971bb50a335 3310079487;3268455957 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942291 D0022 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 77705846 ERR1094803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094803/ERR1094803_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094803/ERR1094803_2.fastq.gz 83ac9686b1cf3735d6c27c0d044b82cf;32fb980b0fe8732843cf7bde21161faa 6124261414;6218686478 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942291 D0022 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 78030109 ERR1094804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094804/ERR1094804_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094804/ERR1094804_2.fastq.gz f6ef192157173ba9b3d270ab8048f975;15ab1bf17c275cf133bcd211c0a367f7 6176413071;6249361452 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942292 D0023 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 17648750 ERR1094805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094805/ERR1094805_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094805/ERR1094805_2.fastq.gz 9f54d642c0b5518e55785e18e4e672de;e757e9da66bcbf0002663eec1fe9eb59 1400003557;1423227557 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942292 D0023 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 17808220 ERR1094806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094806/ERR1094806_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094806/ERR1094806_2.fastq.gz 1c132ea70f4ee4999d8db485440098b9;ca4d3536ce3ae51cf93999e482e444e2 1418600506;1436655562 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942293 D0024 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 99095046 ERR1094807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094807/ERR1094807_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094807/ERR1094807_2.fastq.gz 619adddffce4139ef856daecc814ae14;1c99a9f2dd36c3fc8389931cc749c454 7697616858;7773524014 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942293 D0024 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 95495627 ERR1094808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094808/ERR1094808_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094808/ERR1094808_2.fastq.gz 2ba3a90677e5d613d89ca550fb74f123;ccb10948268e97a02d5425b5658a3f96 7330758821;7402325955 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942294 D0025 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 25349515 ERR1094809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094809/ERR1094809_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094809/ERR1094809_2.fastq.gz 40b20edf3b07ac307171c731a1d26706;d102292b82322a7eb8cc9373d1dd9a7b 1979818803;1938540456 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942294 D0025 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 24587412 ERR1094810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094810/ERR1094810_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094810/ERR1094810_2.fastq.gz 3709774b2ffc7095c69b809e907485a4;cb624c9259c3aa1d948405673ea5b0dd 1897906749;1858865023 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942267 A1142 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 237328 ERR1094779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094779/ERR1094779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094779/ERR1094779_2.fastq.gz c6b3a2b956b18a9e6b3cf93a1e32c01b;b8262717919970562eb700d00210f119 15943170;16493333 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942277 B0626 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 35008351 ERR1094789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094789/ERR1094789_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094789/ERR1094789_2.fastq.gz 566daf81f25956cd289dd3b6b1cbd853;b49f4195caaf9e9c172c7e1f68e01761 2916091531;2985105539 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942270 A1146 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 15177460 ERR1094782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094782/ERR1094782_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094782/ERR1094782_2.fastq.gz 37bc35bb045144e3c49e1c8620c5c78f;97c2a4697839d16f026b5b30baa6e7a8 967029359;994344194 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942274 B0623 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 21623712 ERR1094786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094786/ERR1094786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094786/ERR1094786_2.fastq.gz 1ad039bed5fb2e451e1fc7fa09e5eda5;4ede837c863e3aea318c7de35707ad79 1856108274;1891725518 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942269 A1145 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 9410725 ERR1094781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094781/ERR1094781_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094781/ERR1094781_2.fastq.gz d4fe78eed70163576d3f20fead39177c;8d24ef6f61b739191ff845763b9bc8db 611468550;626024052 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942268 A1144 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 11934198 ERR1094780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094780/ERR1094780_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094780/ERR1094780_2.fastq.gz 09cc0693c163f3c306c6861cefe2a4b3;c13f8482be40dd93dabb7e1c5bccedab 717937541;729522678 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942271 B0620 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 15176127 ERR1094783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094783/ERR1094783_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094783/ERR1094783_2.fastq.gz 1634a8b403b34691ad22b4fa5d53afe3;8d9ff469779df035a6764f14777bb8d5 1306669325;1342661167 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942265 A1140 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 13227134 ERR1094777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094777/ERR1094777_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094777/ERR1094777_2.fastq.gz 9fade193957c867802accb7ed8822df3;88cc76f2e486932155fda76053b616ee 963225881;981225373 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942273 B0622 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 31115751 ERR1094785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094785/ERR1094785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094785/ERR1094785_2.fastq.gz 8a410006dbcdaa3ca87e958212310d48;98ed074d87002c0372df31565e4efd98 2632853759;2693047826 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942272 B0621 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 20871329 ERR1094784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_2.fastq.gz a0a27714cf273c2af218ae7e84cb765a;42068f47a62ae52ef2d94fcdea1173d4 1734887058;1769681767 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942281 C1824 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 60954954 ERR1094793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_2.fastq.gz d195918dc21bd80fcbcf5e3055c9e1eb;efd29499b049aaaa338b81fc95ca9965 5116924426;5280303595 -Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942282 C1825 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 63743693 ERR1094794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_2.fastq.gz e66f62757a607246c7b69add6d8bf543;b1ddb80eac2e76489f86883b945f85a6 5352278174;5537792499 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18023_Japan_Edo_4 SRA PRJNA608555 SRS6212663 A18023_Japan_Edo_4 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 28256540 SRR11176627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/027/SRR11176627/SRR11176627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/027/SRR11176627/SRR11176627_2.fastq.gz 5831bf5f70ed34a90a4b6f8a41ef3fe1;876795c72323bbe231d4f0ea73ee5aa6 1457889020;1701645469 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18021_Japan_Edo_2 SRA PRJNA608555 SRS6212661 A18021_Japan_Edo_2 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 16275747 SRR11176629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/029/SRR11176629/SRR11176629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/029/SRR11176629/SRR11176629_2.fastq.gz 2f7cbec3ee788177cd0757af854d791f;6d775029ac36228432ef298973a23ec6 824309761;986790734 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18020_Japan_Edo_1 SRA PRJNA608555 SRS6212660 A18020_Japan_Edo_1 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 13460948 SRR11176630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/030/SRR11176630/SRR11176630_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/030/SRR11176630/SRR11176630_2.fastq.gz f72b137c2dc0b256018d7a5156867dec;a0390060436eb370dce0a1c65a55541c 662327420;775389197 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18018_Japan_Jomon_4 SRA PRJNA608555 SRS6212658 A18018_Japan_Jomon_4 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 8017182 SRR11176632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/032/SRR11176632/SRR11176632_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/032/SRR11176632/SRR11176632_2.fastq.gz d6ba2f81de7080a29462bd03abef822f;71f0e5f9d4813ff20f25cdf62cd15201 363491671;409423805 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18016_Japan_Jomon_2 SRA PRJNA608555 SRS6212656 A18016_Japan_Jomon_2 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 9106996 SRR11176634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/034/SRR11176634/SRR11176634_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/034/SRR11176634/SRR11176634_2.fastq.gz 9c292bd6d6d4f3c8321545968767facf;77d1dd596bb7bbffc63553918595bae5 406949209;459531948 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18033_Japan_Edo_10 SRA PRJNA608555 SRS6212655 A18033_Japan_Edo_10 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 14344364 SRR11176635 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/035/SRR11176635/SRR11176635_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/035/SRR11176635/SRR11176635_2.fastq.gz c84c4a5435f35a5730a3dacec900d338;bedcb449da2bcf88d3f79342f55474ec 766653172;893293180 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18032_Japan_Edo_9 SRA PRJNA608555 SRS6212654 A18032_Japan_Edo_9 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 14788985 SRR11176636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/036/SRR11176636/SRR11176636_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/036/SRR11176636/SRR11176636_2.fastq.gz 28e431435f6c9da7471791a5f87f6d12;31a68e414aa874a71e10a21829ee6f35 729232341;851264876 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18027_Japan_Edo_8 SRA PRJNA608555 SRS6212652 A18027_Japan_Edo_8 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 5349054 SRR11176638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/038/SRR11176638/SRR11176638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/038/SRR11176638/SRR11176638_2.fastq.gz 48a173ff1dc9832b196e71f12fa7b557;14427a8e784f293e4b23fdf7001b52a0 248876272;280102340 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18026_Japan_Edo_7 SRA PRJNA608555 SRS6212651 A18026_Japan_Edo_7 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 15256347 SRR11176639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/039/SRR11176639/SRR11176639_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/039/SRR11176639/SRR11176639_2.fastq.gz 96004934d7b6055e8f5618b303373820;bef884e76a96c2665874edb84fa8a8b2 849341234;1041195299 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18025_Japan_Edo_6 SRA PRJNA608555 SRS6212650 A18025_Japan_Edo_6 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 20949072 SRR11176640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/040/SRR11176640/SRR11176640_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/040/SRR11176640/SRR11176640_2.fastq.gz 559689dc63623d21780cfe3f75022d86;234396626d866e35cfecd741974d590a 1147493145;1392807336 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18024_Japan_Edo_5 SRA PRJNA608555 SRS6212649 A18024_Japan_Edo_5 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 11292668 SRR11176641 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/041/SRR11176641/SRR11176641_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/041/SRR11176641/SRR11176641_2.fastq.gz 08090c3929583fe8ede5a5398c95b598;2c0d83bd6b113d214a4a378f534f1293 752065439;923639274 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18015_Japan_Jomon_1 SRA PRJNA608555 SRS6212648 A18015_Japan_Jomon_1 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 11451382 SRR11176642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/042/SRR11176642/SRR11176642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/042/SRR11176642/SRR11176642_2.fastq.gz 35620180c3512f7cea8518161f3787d6;e92e959b61677f01dc03941f84f7ff18 616604877;775312906 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl dentine_lib1 dentine_lib1 double Unknown none unspecified SINGLE WGS NA dentine_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/dentine_lib1.fq.gz 4aad6319a7fe3f696e06b84f809396b8 37909146294 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl dentine_lib2 dentine_lib2 double Unknown none unspecified SINGLE WGS NA dentine_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/dentine_lib2.fq.gz 1e08550125801c3ee185f541e3077a33 4663745319 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl femur_lib1 femur_lib1 double Unknown none unspecified SINGLE WGS NA femur_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/femur_lib1.fq.gz 09a342a277786b89a98c7153f7c6b22e 2865197889 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl new_lib1 new_lib1 double Unknown none unspecified SINGLE WGS NA new_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/new_lib1.fq.gz c0354d39de98dc75553a702c78cfaf4b 160275221 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl new_lib2 new_lib2 double Unknown none unspecified SINGLE WGS NA new_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/new_lib2.fq.gz 4fb1492524d15cf583714e5693b80eff 510850411 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl pulp_lib1 pulp_lib1 double Unknown none unspecified SINGLE WGS NA pulp_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/pulp_lib1.fq.gz 4d105f8ea4f7154428b05cdd6c3a8d43 4467854717 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl whole_root_lib1 whole_root_lib1 double Unknown none unspecified SINGLE WGS NA whole_root_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/whole_root_lib1.fq.gz 5b325db922d3182f7f5a71607b987199 1186859094 -Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl whole_root_lib2 whole_root_lib2 double Unknown none unspecified SINGLE WGS NA whole_root_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/whole_root_lib2.fq.gz 5adca2b3f7e250585826392205f115f6 5524601607 -GuzmanSolis2021 2021 10.7554/eLife.68612 COYC4 Dryad 10.5061/dryad.5x69p8d2s 864574 COYC4.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 1397 COYC4.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864574 bced2b602baa7e9a2b4ebe19c84f3454 334550 -GuzmanSolis2021 2021 10.7554/eLife.68612 HSJN194 Dryad 10.5061/dryad.5x69p8d2s 864575 HSJN194.GQ331046 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 1215 HSJN194.GQ331046 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864575 a30d7d5a7f051b9efe8e2eefb17f111a 284669 -GuzmanSolis2021 2021 10.7554/eLife.68612 HSJN240 Dryad 10.5061/dryad.5x69p8d2s 864576 HSJN240.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 7928 HSJN240.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864576 9478ff3448d3695bcf0a4eac52c8dfe2 1827724 -GuzmanSolis2021 2021 10.7554/eLife.68612 HSJNC81 Dryad 10.5061/dryad.5x69p8d2s 864577 HSJNC81.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 25536 HSJNC81.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864577 28f7ac3a41cf27265ad58bbb943f233c 6432414 -Namouchi2018 2018 10.1073/pnas.1812865115 BSS31 ENA PRJEB24499 ERS2865269 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 54518592 ERR2862153 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/003/ERR2862153/ERR2862153_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/003/ERR2862153/ERR2862153_2.fastq.gz f36edddd83739b18d00562376f27eb16;2e317b38db5e7bb5a32b9ff22021f0b3 2768446734;2889325922 -Namouchi2018 2018 10.1073/pnas.1812865115 SLC1006 ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 203877595 ERR2862150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_2.fastq.gz a6112d04b304b2375dae6c34033bbc16;acafcc79f3d021db8f3308d9ac935bcf 11059312752;11017819383 -Namouchi2018 2018 10.1073/pnas.1812865115 SLC1006 ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 221791489 ERR2862151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_2.fastq.gz f80f8e1d0712e6c0f2a65e79acc67ba3;190cc46629e5eda6fef664d6cb80ee3d 11578595157;11538874156 -Namouchi2018 2018 10.1073/pnas.1812865115 OSL1 ENA PRJEB24499 ERS2865270 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 40003541 ERR2862148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/008/ERR2862148/ERR2862148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/008/ERR2862148/ERR2862148_2.fastq.gz 41283d9b2f686b7f8a046e1c96b34bdb;a53312032dfc64e719e3be7263351e47 2161454525;2250278255 -Namouchi2018 2018 10.1073/pnas.1812865115 OSL1 ENA PRJEB24499 ERS2865270 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 185270186 ERR2862149 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/009/ERR2862149/ERR2862149_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/009/ERR2862149/ERR2862149_2.fastq.gz 8bb91f4a47371d605a6e5c6a8dd14728;4c5264643c3b180902778e99c48a6cb6 10098942815;10702895807 -Namouchi2018 2018 10.1073/pnas.1812865115 Ber45 ENA PRJEB24499 ERS2865268 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 222117414 ERR2862147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/007/ERR2862147/ERR2862147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/007/ERR2862147/ERR2862147_2.fastq.gz fc67a9eb81749af90752cd998025bf75;575f66d2c19c73797e829c8b2cf1245a 11273955083;11260577539 -Namouchi2018 2018 10.1073/pnas.1812865115 Ber37 ENA PRJEB24499 ERS2865267 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 61657375 ERR2862146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/006/ERR2862146/ERR2862146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/006/ERR2862146/ERR2862146_2.fastq.gz 30e2676bebf58be0ee28c1fb0c5d1a0c;deaf3af1e3bb8efb11ade6571f99db64 3045935914;3190429031 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22885856 ERR4000686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000686/ERR4000686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000686/ERR4000686_2.fastq.gz b761b2c14dc8105926b7191241b7bca0;52cc8cf21f54204a16fa8a5eb1b2b388 903939528;959368702 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3060071 ERR4000687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000687/ERR4000687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000687/ERR4000687_2.fastq.gz 00ac30dd567beb5768f3ab459e094779;56bb75bac71e27617fd12fa17549cda5 141446644;144607639 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2845127 ERR4000688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000688/ERR4000688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000688/ERR4000688_2.fastq.gz 863ac8d474747be2f26fd05f7b6e5c92;298c306fcfc68c809bc4e21052714fbd 130674021;133597567 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3090361 ERR4000689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000689/ERR4000689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000689/ERR4000689_2.fastq.gz 41b85464025aad3854d68c50954d3178;1d92569f385d1c1aceae19dc2f062815 142248765;147778445 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3001848 ERR4000690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000690/ERR4000690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000690/ERR4000690_2.fastq.gz 5a67c2c409e3c0d7d858044bf15bac2e;ab7111da19e1ecfb0f41f65f6030aae8 138790891;144181598 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3144286 ERR4000691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/001/ERR4000691/ERR4000691_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/001/ERR4000691/ERR4000691_2.fastq.gz 07e1e801dd06cbea17db024eee1b5ebb;bd1d86c678977bcab81e1a8b98604dcb 144910502;147731992 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2933372 ERR4000692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/002/ERR4000692/ERR4000692_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/002/ERR4000692/ERR4000692_2.fastq.gz c31075d8fc9dd701919afa16b7cb5ac9;89416696b8565f3e9551a8e678191c62 134241540;136926614 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3189566 ERR4000693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/003/ERR4000693/ERR4000693_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/003/ERR4000693/ERR4000693_2.fastq.gz d08c73ba61597290601a32d21390359a;713fde2e0f4d22a1a9d42f419b0aeda2 146532910;151772674 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3095357 ERR4000694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/004/ERR4000694/ERR4000694_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/004/ERR4000694/ERR4000694_2.fastq.gz d9e3e951d9fe85bc500873d28b2f1ea9;b3f5eb89170419c6294a67aab7da4bd5 142893406;148019854 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU020 ENA PRJEB37508 ERS4398262 AGU020.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3843987 ERR4000695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000695/ERR4000695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000695/ERR4000695_2.fastq.gz e204206e1308bc6eef10c2c198eeece2;cb9f0b504f184ccdddbf548e9513bf28 124732417;133856024 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU020 ENA PRJEB37508 ERS4398262 AGU020.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3286933 ERR4000696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000696/ERR4000696_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000696/ERR4000696_2.fastq.gz be6f86deace194cbdcc95c44855cee7c;b92f11a35670415ec6f2987d8616d9df 107235347;115948150 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3009182 ERR4000697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000697/ERR4000697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000697/ERR4000697_2.fastq.gz cfe924ca1d6f93a2d4ea7c27776f3d60;fb1dfc49b953c42448dd38797cb0f4ee 138974546;142332055 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2802868 ERR4000698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000698/ERR4000698_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000698/ERR4000698_2.fastq.gz e9105b295a7fe8f923e4254cad17b9a7;291025c02f4051d30eae51cdce5f7f7f 128476539;131512034 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3041178 ERR4000699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000699/ERR4000699_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000699/ERR4000699_2.fastq.gz 896f968073a75037fd5951a4afb9a9de;635ddf4c79217bec3814d6565c5eda4c 139986140;145677594 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2957434 ERR4000700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000700/ERR4000700_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000700/ERR4000700_2.fastq.gz a0abcfe156c99b0701fcade7d1c58e8b;376a1d47ced8bf06bb4bf26ace26c9c2 136765755;142283105 -Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398260 AGU007.A0102.TP2.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20506151 ERR4000685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000685/ERR4000685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000685/ERR4000685_2.fastq.gz a2861438793d9a4b94a9100ad0dc2354;09e2e34e6bc2b68d24d0522f2c49eb1f 850624514;925250575 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM83 SRA PRJNA730407 SRS9000656 XBQM83_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 14549039 SRR14565211 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/011/SRR14565211/SRR14565211_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/011/SRR14565211/SRR14565211_2.fastq.gz b6bd276c572f7deb52fb927f09c9c9df;9d949477cc70dec4ecf47365a0d9646b 951359310;908915820 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM83 SRA PRJNA730407 SRS9000653 XBQM83_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 64016080 SRR14565212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/012/SRR14565212/SRR14565212_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/012/SRR14565212/SRR14565212_2.fastq.gz 217eb4ce24c1b809827be09d056ca523;a511d66a5cbe5ec666a3cf155fd23a6e 4639284556;4662834484 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM11 SRA PRJNA730407 SRS9000654 XBQM11_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 16815096 SRR14565213 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/013/SRR14565213/SRR14565213_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/013/SRR14565213/SRR14565213_2.fastq.gz f8a84396cd0a29d5750bbcc0d4e6ed25;0e217afcad8f23002d654ffe10983747 1098450781;1098816816 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM11 SRA PRJNA730407 SRS9000655 XBQM11_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 9311745 SRR14565214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/014/SRR14565214/SRR14565214_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/014/SRR14565214/SRR14565214_2.fastq.gz ab013f34350b95e60155de1618cd486e;6bd3949829f9c9502b5d98a04d5a7878 660607550;654762621 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM7 SRA PRJNA730407 SRS9000651 XBQM7_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 13824752 SRR14565215 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/015/SRR14565215/SRR14565215_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/015/SRR14565215/SRR14565215_2.fastq.gz 77cec9ca56524f021b18c6a513b6c7da;05ce15d031818d49dac4a95adf51047f 903370747;895710707 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM7 SRA PRJNA730407 SRS9000652 XBQM7_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 69268460 SRR14565216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/016/SRR14565216/SRR14565216_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/016/SRR14565216/SRR14565216_2.fastq.gz a8d0657bddb8f901ea3748ecbb9cede0;6feed0c285ba0b7ac370c998e892d1c8 5235871812;5459600628 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM90 SRA PRJNA730407 SRS9000650 XBQM90_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 25388703 SRR14565217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/017/SRR14565217/SRR14565217_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/017/SRR14565217/SRR14565217_2.fastq.gz a3a200693b96295951f9ced6eb071f3a;eb825715d9c61bb2f52838973297611f 1712233814;1710476566 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM90 SRA PRJNA730407 SRS9000648 XBQM90_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 63328125 SRR14565218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/018/SRR14565218/SRR14565218_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/018/SRR14565218/SRR14565218_2.fastq.gz fcea3925b978263a041330466ae4f9f8;4655ede3e13e0011050a4a11d09321ad 4243106558;4217903097 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM64 SRA PRJNA730407 SRS9000649 XBQM64_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 15172493 SRR14565219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/019/SRR14565219/SRR14565219_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/019/SRR14565219/SRR14565219_2.fastq.gz 1cc92a85227084da00f67d4883f5c417;5bc2b90d8d5e5318b2437691990a8c11 1041039188;1115465118 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM64 SRA PRJNA730407 SRS9000647 XBQM64_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 19590596 SRR14565220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/020/SRR14565220/SRR14565220_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/020/SRR14565220/SRR14565220_2.fastq.gz fb5726b5f57eddc174c86924d04b7314;0ed1afd6db8f74f4607a688e1625fa15 1294841802;1270489220 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM20 SRA PRJNA730407 SRS9000646 XBQM20_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 29095860 SRR14565221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/021/SRR14565221/SRR14565221_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/021/SRR14565221/SRR14565221_2.fastq.gz aac99cfe6f22250aea5faf0fa93ae688;d64864088c980891729b1040c74e6169 1895927673;1867829467 -Wu2021 2021 10.1371/journal.ppat.1009886 XBQM20 SRA PRJNA730407 SRS9000645 XBQM20_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 54881279 SRR14565222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/022/SRR14565222/SRR14565222_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/022/SRR14565222/SRR14565222_2.fastq.gz 9798d971880d9ac36309812f439c805b;775e797e41249aa7db50260f8caca7df 3532466872;3372737972 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 18128930 ERR5354929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354929/ERR5354929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354929/ERR5354929_2.fastq.gz 6723e5963cf3e566464a89eee2673a87;754ae1adc2b44a0048c0976748fc3b3c 616541849;746635527 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12727342 ERR5354930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5354930/ERR5354930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5354930/ERR5354930_2.fastq.gz df93929b1354aa05cfbef70b6c3134e4;bb3a1cbc8e2f9db73b67b5d9da8c1eff 415782367;501384365 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina MiniSeq PAIRED WGS 139312 ERR5354966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5354966/ERR5354966_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5354966/ERR5354966_2.fastq.gz 690c46c13471abaaeee2f50d91961b59;1ea84692b19c350a8dbeea9a25f7b01e 3362749;3454741 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 7357358 ERR5354967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5354967/ERR5354967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5354967/ERR5354967_2.fastq.gz 7712c7e52a699ad6b0b8d4219cda5018;8f0854688b386b2d7d419b9b4baf1d39 246285309;302024827 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina MiniSeq PAIRED WGS 52166 ERR5354968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5354968/ERR5354968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5354968/ERR5354968_2.fastq.gz a471165abdd6ec69779dfd35460d38dd;5c9659932b13735d0a55eccb014c3850 1170989;1245684 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 6567554 ERR5354969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354969/ERR5354969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354969/ERR5354969_2.fastq.gz 2ce2643dd0aa1e11c6b7e177e18b0268;62f52c94b612eaa251478ee18f18f2a6 224093508;269050193 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 91093746 ERR5354999 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354999/ERR5354999.fastq.gz 8a73938c41df3ddd963e30bcb45cd469 4086127948 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 66607702 ERR5355000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5355000/ERR5355000.fastq.gz 781d4a90ef7f018dc6fc28c60ce94ad8 2787431584 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina MiniSeq SINGLE WGS 594022 ERR5355036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5355036/ERR5355036.fastq.gz fd0698188a4202d32105575f04998cd5 22313113 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 71560003 ERR5355037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5355037/ERR5355037.fastq.gz 78e038f528a501cba04e3450cc4dda26 2732657638 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina MiniSeq SINGLE WGS 209607 ERR5355038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5355038/ERR5355038.fastq.gz 2d9715d0fcf53d330d2b6dcd8f427235 7822473 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 52561225 ERR5355039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5355039/ERR5355039.fastq.gz c55a07e76fa6879e2afba5503a1e64d3 2041453601 -Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE387 GenBank PRJEB25584 LT992447 RISE387 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992447.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992447.1 7caa93249501bd21c45496a1cbb14a9f 3374 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA195 GenBank PRJEB25584 LT992441 DA195 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992441.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992441.1 986e00023fe60e2748e57305ea5b0023 3372 -Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE563 GenBank PRJEB25584 LT992443 RISE563 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992443.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992443.1 acc6a806d2b2a501809221cd0f70012d 3341 -Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE254 GenBank PRJEB25584 LT992459 RISE254 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992459.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992459.1 44b9a94446baa1a1fae23441d547a2cf 3341 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA29 GenBank PRJEB25584 LT992438 DA29 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992438.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992438.1 c871d0ed0f29deb084b1c848721cd758 3338 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA27 GenBank PRJEB25584 LT992439 DA27 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992439.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992439.1 76d0e7b583614fcf1e837b4930a06ae3 3338 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA119 GenBank PRJEB25584 LT992440 DA119 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992440.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992440.1 79274dee021559cbd2fd40b067b393ef 3378 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA45 GenBank PRJEB25584 LT992442 DA45 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992442.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992442.1 ff8b800b99abd74e9673116ae6518742 3371 -Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE154 GenBank PRJEB25584 LT992455 RISE154 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992455.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992455.1 27b11133502f2fbea6e82131345e9f66 3363 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA51 GenBank PRJEB25584 LT992444 DA51 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992444.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992444.1 d5d71252e0970cc0b2b1cb32ab4e2fc3 3338 -Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE386 GenBank PRJEB25584 LT992448 RISE386 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992448.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992448.1 71a21ca87809ab1ba033300c4a7ffa55 3374 -Muhlemann2018 2018 10.1038/s41586-018-0097-z DA222 GenBank PRJEB25584 LT992454 DA222 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992454.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992454.1 df1dfaf15c22d263bd9f48246d3f6ae8 3339 -BarGal2012 2012 10.1002/hep.25852 Yangju child mummy GenBank Unknown JN315779 unspecified double Unknown none unspecified SINGLE Unknown NA JN315779.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/JN315779.1 0f9e5d114e839270583de1a9ead66260 3342 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb4 SRA PRJNA646369 SRS7008173 Herb4 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4430641 SRR12224798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/098/SRR12224798/SRR12224798.fastq.gz 349af60c1d39bb6680c62c82b7af1968 170617155 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb5 SRA PRJNA646369 SRS7008179 Herb5 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4088135 SRR12224792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/092/SRR12224792/SRR12224792.fastq.gz f7d87e394ad365054ccfa8a828b25c0a 166304371 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb9 SRA PRJNA646369 SRS7008183 Herb9 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4164522 SRR12224788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/088/SRR12224788/SRR12224788.fastq.gz ceea464aa9541cdd584bf3ebdc36275f 169510392 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK003 SRA PRJNA646369 SRS7008154 MK003 double AmpliTaq Gold DNA none unspecified SINGLE WGS 40098604 SRR12224817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/017/SRR12224817/SRR12224817.fastq.gz b9ea0dbc3777267d9caacf08aeb1497c 1391910082 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK011 SRA PRJNA646369 SRS7008163 MK011 double AmpliTaq Gold DNA none unspecified SINGLE WGS 36843352 SRR12224808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/008/SRR12224808/SRR12224808.fastq.gz 3c87c37037a37fb420ea7d97355a9fe7 1279887629 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK012 SRA PRJNA646369 SRS7008164 MK012 double AmpliTaq Gold DNA none unspecified SINGLE WGS 20856691 SRR12224807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/007/SRR12224807/SRR12224807.fastq.gz f45f82be8a5ac46bdb1a3b76caad7c80 779043612 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK014 SRA PRJNA646369 SRS7008166 MK014 double AmpliTaq Gold DNA none unspecified SINGLE WGS 13382520 SRR12224805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/005/SRR12224805/SRR12224805.fastq.gz a63a992d0cf94c97dd00039ccdb98f09 502055195 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK015 SRA PRJNA646369 SRS7008167 MK015 double AmpliTaq Gold DNA none unspecified SINGLE WGS 26349087 SRR12224804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/004/SRR12224804/SRR12224804.fastq.gz 1bd625eaef0397a0e44dcf1d3dbe0b40 929439153 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK016 SRA PRJNA646369 SRS7008168 MK016 double AmpliTaq Gold DNA none unspecified SINGLE WGS 19087704 SRR12224803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/003/SRR12224803/SRR12224803.fastq.gz 4b4e58f9fb4aa7f28ed573ece4428acf 686766302 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK017 SRA PRJNA646369 SRS7008169 MK017 double AmpliTaq Gold DNA none unspecified SINGLE WGS 27771155 SRR12224802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/002/SRR12224802/SRR12224802.fastq.gz f5c5b70320eda0e279b2cac8e31f36a8 999627110 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK019 SRA PRJNA646369 SRS7008171 MK019 double AmpliTaq Gold DNA none unspecified SINGLE WGS 23935870 SRR12224800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/000/SRR12224800/SRR12224800.fastq.gz e2f46439990673cca8e3f481bdf3ee22 857004771 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK020 SRA PRJNA646369 SRS7008172 MK020 double AmpliTaq Gold DNA none unspecified SINGLE WGS 28559669 SRR12224799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/099/SRR12224799/SRR12224799.fastq.gz 964d2fb8032bca2871a9a98928774420 1045759253 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK023 SRA PRJNA646369 SRS7008175 MK023 double AmpliTaq Gold DNA none unspecified SINGLE WGS 15043930 SRR12224796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/096/SRR12224796/SRR12224796.fastq.gz bbfe0ae4791a5d25f065db5377bcb85a 561055390 -Danneels2021 2021 10.1016/j.cub.2021.03.049 MK025 SRA PRJNA646369 SRS7008177 MK025 double AmpliTaq Gold DNA none unspecified SINGLE WGS 22600558 SRR12224794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/094/SRR12224794/SRR12224794.fastq.gz 45a9346eee8f693e8a8f579911a7a12c 797445194 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208309.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208309.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208309.1 7f7425a5a99c0fa48947dc74cc38c7e1 2434 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208310.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208310.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208310.1 befbf7de2173e509775a25e6b81b20a9 2428 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208311.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208311.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208311.1 3503da7d8fdd8b0a5973147c2ffcbd89 2301 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF116575.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF116575.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF116575.1 8e0e87fadeb8f0d2b5623c645b425009 1352 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AY744935.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AY744935.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AY744935.1 3970e212eb8b492f9f045c71f0c3f7a0 1636 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF250356.2 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF250356.2 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF250356.2 d9f855cb3f051e4458049c46ad77cae0 1546 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AY130766.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AY130766.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AY130766.1 c66636db2e0f9adc34291650a366e831 1133 -Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF333238.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF333238.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF333238.1 6b80207549ec72324985e87491e2ea5f 1002 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 SK11 SRA PRJNA417381 SRS2667046 SK11 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 932681 SRR6263250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/000/SRR6263250/SRR6263250_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/000/SRR6263250/SRR6263250_2.fastq.gz 68afc6b7f233bd9345c583f78de68458;0268c08ff7d782b6f22ec59a85f5eee4 68170556;60168167 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 SK11 SRA PRJNA417381 SRS2667046 SK11_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 870237 SRR6263256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/006/SRR6263256/SRR6263256.fastq.gz 1c02d530a9aea2173b8d11f3a11fa295 29299247 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 T18 SRA PRJNA417381 SRS2667044 T18 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 923820 SRR6263251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/001/SRR6263251/SRR6263251_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/001/SRR6263251/SRR6263251_2.fastq.gz 4fc9ab23fc065e3f8419f6fe3c9353a0;9a4a1c4b8d838d5349509d5f01c763b6 69712147;64085918 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 T18 SRA PRJNA417381 SRS2667044 T18_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 799283 SRR6263257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/007/SRR6263257/SRR6263257.fastq.gz 72c7e90c18f9d282e648ee3003e7c771 27296727 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Body 188 SRA PRJNA417381 SRS2667047 Body188 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 38370698 SRR6263249 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/009/SRR6263249/SRR6263249_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/009/SRR6263249/SRR6263249_2.fastq.gz f43f55ed4b4dce646ba5527bd980381a;db892bda8736fa457d27eafa01929869 2891352307;2620341921 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Body 188 SRA PRJNA417381 SRS2667047 Body188_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 35172757 SRR6263255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/005/SRR6263255/SRR6263255.fastq.gz 78aa02f8f124373ce030ddf21a03eca7 1257325015 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_1 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 32941086 SRR6263252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/002/SRR6263252/SRR6263252_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/002/SRR6263252/SRR6263252_2.fastq.gz cd0ceae3960e977b57250d413a2acd45;474a5c1a04c9f1f23e4452a638ce1fe8 2415048428;2509014319 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_2 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 51410154 SRR6263253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/003/SRR6263253/SRR6263253_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/003/SRR6263253/SRR6263253_2.fastq.gz e01e8e595180db68811ff214cbb7f341;f48cbf2293abe34f35a7c44c42356965 3864535768;3776741536 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_3 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 7268389 SRR6263254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/004/SRR6263254/SRR6263254_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/004/SRR6263254/SRR6263254_2.fastq.gz bd88cc13294dfcf0e9da8e52b43bf6e0;bb6cf2349340aad4f492efff25b25127 704754734;607683648 -Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942272 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 20871329 ERR1094784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_2.fastq.gz a0a27714cf273c2af218ae7e84cb765a;42068f47a62ae52ef2d94fcdea1173d4 1734887058;1769681767 -Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942281 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 60954954 ERR1094793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_2.fastq.gz d195918dc21bd80fcbcf5e3055c9e1eb;efd29499b049aaaa338b81fc95ca9965 5116924426;5280303595 -Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942282 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 63743693 ERR1094794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_2.fastq.gz e66f62757a607246c7b69add6d8bf543;b1ddb80eac2e76489f86883b945f85a6 5352278174;5537792499 -Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942276 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 33452784 ERR1094788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094788/ERR1094788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094788/ERR1094788_2.fastq.gz 4ef9983030d265f96f770aac240b16e4;3f678c48d82e637ef5dc64603337ccb2 2805332116;2813277772 -Schuenemann2011 2011 10.1073/pnas.1105107108 ES 1-5 GenBank Unknown HE576987 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina Genome Analyzer IIx SINGLE Targeted-Capture NA HE576986.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/HE576986.1 a471f7422782c8f822585ba2882425e6 1461 -PattersonRoss2018 2018 10.1371/journal.ppat.1006750 NASD24 GenBank Unknown MG585269 LM1 double Unknown none Illumina HiSeq 1500 PAIRED Targeted-Capture NA MG585269.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/MG585269.1 dd915f2e6514598ce1512406f54ed84e 3314 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 37860526 ERR2570893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570893/ERR2570893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570893/ERR2570893_2.fastq.gz fe24702a3a31d9503081dc3332311b6f;00ca6e5ad01f4d0c9de87ec4fafaf6e9 2707281650;2506718803 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 35924761 ERR2570894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570894/ERR2570894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570894/ERR2570894_2.fastq.gz 044a82f8dcbe86fdc0b40747b9996592;b3f02f47ad84fc162644ffb8d44f2413 2454813540;2429692257 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 32893331 ERR2570895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570895/ERR2570895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570895/ERR2570895_2.fastq.gz d8eddef8a75e69c09e681183dc980f8b;ece99d98de9f346ed3432dd36c507532 2323725686;2310827969 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12654810 ERR2570896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570896/ERR2570896_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570896/ERR2570896_2.fastq.gz dbb1c2463207c412cdd8777b91ab2276;c1e6f3199e2e5471fade906083b6b8ad 523906635;600245609 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11958869 ERR2570897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570897/ERR2570897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570897/ERR2570897_2.fastq.gz 511688417572c894957c735fa979cc39;f99cc3bccb2603d18bc20bbf58858e62 495183145;574717274 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12316322 ERR2570898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570898/ERR2570898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570898/ERR2570898_2.fastq.gz a3ba46a634c766ee08ebb7b3bbc173d9;f951e17a1a15dd856beb330e046c80d9 517246160;591977836 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11887488 ERR2570899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570899/ERR2570899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570899/ERR2570899_2.fastq.gz 22e612ee7b3de185fbdda88604b2d1bc;4fd030d802c572a92d1042f664534a45 496531587;575478945 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 21439776 ERR2570900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570900/ERR2570900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570900/ERR2570900_2.fastq.gz 5101240c04d824be255ffcdff4e851ad;dfe9af3aa0a652e830beaa699304dba4 903450834;1024907077 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 20815771 ERR2570901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570901/ERR2570901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570901/ERR2570901_2.fastq.gz 85620bedab1b71c08b42494c7978d153;5451c9142bab47801b0d84bd5c35261a 877430007;1008398277 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 21032362 ERR2570902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570902/ERR2570902_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570902/ERR2570902_2.fastq.gz 273417f980b948511f8088705af9f663;1375696481266f1ff6501722e7746d1d 899548041;1018525770 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 20556954 ERR2570903 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570903/ERR2570903_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570903/ERR2570903_2.fastq.gz 977a623036fd4a6d426e25bf0b113ff5;b8202619b9ceaeb47a56b0febd3e607c 875152312;1002987453 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12910492 ERR2570904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570904/ERR2570904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570904/ERR2570904_2.fastq.gz f365b4c693f2aa93421ae5be050ef0ed;7d81c9df2d6dabf8bb9060ae829c3b54 540264717;619499900 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12385163 ERR2570905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570905/ERR2570905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570905/ERR2570905_2.fastq.gz 028d3c79cb175781e868f9ef104395f9;af3d7ed2e8369664b8e4634d9dd388cd 520056036;602138520 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12498680 ERR2570906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570906/ERR2570906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570906/ERR2570906_2.fastq.gz 2ef341033cff59c76713893e27f3ea66;45e04521445c06e434555f20915be21a 529734232;607493467 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12184135 ERR2570907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570907/ERR2570907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570907/ERR2570907_2.fastq.gz e67029b4dd4777f262d43c2645f266f2;d37441aea9ccfaeefbc434e04e8ce54e 515363207;597161718 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7230268 ERR2570908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570908/ERR2570908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570908/ERR2570908_2.fastq.gz cb9bc95f2cc6438f7bfe1fb4b158ab6b;e01a89ea15af1c6b927cd94e653c343c 303220388;345932301 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6817880 ERR2570909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570909/ERR2570909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570909/ERR2570909_2.fastq.gz 26f4b654a6b90fbd59f1971fd5a5de37;1b10f2a549e97235064563e2c7856f83 286744000;329979577 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7145679 ERR2570910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570910/ERR2570910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570910/ERR2570910_2.fastq.gz 22f725683b378519aa7cc167f67c3418;329233049927b45f4663e8279d5a446b 304763925;346372513 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6783520 ERR2570911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570911/ERR2570911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570911/ERR2570911_2.fastq.gz ee8c4220a62fa5759cc0367c91355bae;07353479419ffe903d1806b4708fb3de 289043249;331303302 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7303573 ERR2570912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570912/ERR2570912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570912/ERR2570912_2.fastq.gz b90e8f406c6fb602e393fda94083e312;27803a06b00ae9fd77f41996a71073b2 306921950;351129483 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6756556 ERR2570913 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570913/ERR2570913_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570913/ERR2570913_2.fastq.gz 9f348d5ee46a907453ec9961f150fd4a;b4582109285e44bca557ae668517dd82 284378618;329029977 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7186967 ERR2570914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570914/ERR2570914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570914/ERR2570914_2.fastq.gz e50c337cc27480f28651f552614056c2;b4b4360a5fe095b3de5b29ea1ee9fc29 306738045;349675666 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6791339 ERR2570915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570915/ERR2570915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570915/ERR2570915_2.fastq.gz a8b083ef1123936f9ef083927200e8ad;4ce4834af5638adc81aaa0ee6d30de19 289455817;333219560 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11550313 ERR2570916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570916/ERR2570916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570916/ERR2570916_2.fastq.gz 28e6312acaa41b68d33a28beda876db9;9a7008690d3bd0974e6f213862e5f62c 484099589;553094244 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11135128 ERR2570917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570917/ERR2570917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570917/ERR2570917_2.fastq.gz 08796fb156ceefe08eaf581b3e2cb319;4ede870dad58b4e6ff419e83affe63cd 466878031;538400712 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11350615 ERR2570918 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570918/ERR2570918_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570918/ERR2570918_2.fastq.gz 004575230fecf7f5dd7791e4acd40fcd;51e98969e7b36172d2b5ffda2ceb906e 482762643;550746595 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 10950921 ERR2570919 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570919/ERR2570919_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570919/ERR2570919_2.fastq.gz 94e2761c729790c91cbb252af398b80f;92610efa686172bcfb2e6a240cca1efc 464486018;534041169 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 17520079 ERR2570920 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570920/ERR2570920_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570920/ERR2570920_2.fastq.gz b4b76e15f6d489618a99ae0f99b20992;1b6dfa95bbc58353d8a0bf087a80a219 735655315;834878948 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 16673183 ERR2570921 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570921/ERR2570921_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570921/ERR2570921_2.fastq.gz 7555d3354475746f51c41c278d71d772;8856def9a9a41c433b79d62fa7260707 698103901;804297916 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 17318097 ERR2570922 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570922/ERR2570922_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570922/ERR2570922_2.fastq.gz 32136d3700292f2fcd0788623722b88c;acb475050ce41c193ae8222765557c32 738584777;835859549 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 16615782 ERR2570923 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570923/ERR2570923_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570923/ERR2570923_2.fastq.gz b9c1fad39cd87ae6c860561a90b7cbe3;9ceab94ce7e2cebd94854ec627ae9d30 704695874;808588130 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 28505361 ERR2570924 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570924/ERR2570924_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570924/ERR2570924_2.fastq.gz 1a37ca29c99afab4e4eafcf8d227730d;34f5a16e12bc7aebf78b75d36f9956dc 1190287178;1361585729 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 27285888 ERR2570925 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570925/ERR2570925_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570925/ERR2570925_2.fastq.gz cbfb1bbce9d992dece2edaa47d07b13e;32d30aa2be8016db1fdf5ed5b68147b2 1140426021;1320430592 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 28195675 ERR2570926 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570926/ERR2570926_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570926/ERR2570926_2.fastq.gz 9a7e520ac19de4427bd6092df9d8b32a;b3babed3e103adcd370b0058150647b1 1194566162;1365530607 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 27398108 ERR2570927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570927/ERR2570927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570927/ERR2570927_2.fastq.gz f4b3264c53c63ec6d93aca2cc3db8ced;c7aac52215e932ebd5940297a753faa3 1154087012;1336926417 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 13408535 ERR2570928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570928/ERR2570928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570928/ERR2570928_2.fastq.gz 48ced0fea1465e94b54a9a2437270a69;1c609a0e9634eb386d83105cb6ef4430 565362957;646553913 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12900259 ERR2570929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570929/ERR2570929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570929/ERR2570929_2.fastq.gz f6c687edb5ce72c7b14cfda855f4f8cf;cacce5886ad88004bd4bcba1014d5d94 544920815;630813416 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 13254636 ERR2570930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570930/ERR2570930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570930/ERR2570930_2.fastq.gz 6576c8d16a4c2f82b60330564fc0472d;bfe7f6b9c94c7e66dfc55fc192e601fc 566481579;647103850 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12850208 ERR2570931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570931/ERR2570931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570931/ERR2570931_2.fastq.gz be2c8c9e7daf214c6bc4e54f6982907b;01085d242140169792182aa43a13354d 547170370;632884615 -Worobey2016 2016 10.1038/nature19827 SF20 GenBank Unknown KJ704794 SF20 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704794.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704794.1 138abbc5a7a35686b493939e2d27cfca 8725 -Worobey2016 2016 10.1038/nature19827 NYC7 GenBank Unknown KJ704791 NYC7 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704791.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704791.1 3e4d73069a9dde19517519a781b1e6a4 8780 -Worobey2016 2016 10.1038/nature19827 NYC16 GenBank Unknown KJ704790 NYC16 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704790.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704790.1 1bd39dae86e4206bb7dc517565828e6f 8714 -Worobey2016 2016 10.1038/nature19827 NYC12 GenBank Unknown KJ704789 NYC12 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704789.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704789.1 c36627e2be31f5f8913727ceaf6c7581 8706 -Worobey2016 2016 10.1038/nature19827 NYC4 GenBank Unknown KJ704792 NYC4 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704792.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704792.1 3fb180ffef0451437cec23d1a7a41b1f 8730 -Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704787 PatientOpbMc unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704787.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704787.1 109a8e3388ae516e61fbe81025aba58f 8855 -Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704788 PatientO unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704788.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704788.1 c9bed36585f4d00cdeac3340728f51f2 7490 -Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704797 PatientO unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704797.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704797.1 341b8306332761befecda58427accd07 8852 -Muhlemann2018b 2018 10.1073/pnas.1804921115 DA251 GitHub acorg/parvo-2018 DA251 DA251 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 SINGLE Targeted-Capture NA DA251-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA251-combined.fasta 21f7096675e71e2f81cc9cf81de2af19 112619 -Muhlemann2018b 2018 10.1073/pnas.1804921115 DA336 GitHub acorg/parvo-2018 DA336 DA336 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA336-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA336-combined.fasta 1c9ce3c1c88d4a37fab4ac22ca39adbf 129424 -Muhlemann2018b 2018 10.1073/pnas.1804921115 DA337 GitHub acorg/parvo-2018 DA337 DA337 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA337-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA337-combined.fasta c2707fc958c7483d3879e85ec834b577 636493 -Muhlemann2018b 2018 10.1073/pnas.1804921115 DA66 GitHub acorg/parvo-2018 DA66 DA66 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA66-combined-unique fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA66-combined-unique.fasta 4cbadd0cd45f4a900ceefeee8f4d0344 119199 -Muhlemann2018b 2018 10.1073/pnas.1804921115 NEO105 GitHub acorg/parvo-2018 NEO105 NEO105 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA NEO105-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/NEO105-combined.fasta e22a15caab9a4aa5a4da17b509d431a4 543830 -Muhlemann2018b 2018 10.1073/pnas.1804921115 RISE569 GitHub acorg/parvo-2018 RISE569 RISE569 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA RISE569-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/RISE569-combined.fasta 1ce8487a9481ec7d909eda18f00ed373 564234 -Muhlemann2018b 2018 10.1073/pnas.1804921115 VK143 GitHub acorg/parvo-2018 VK143 VK143 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK143-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK143-combined.fasta c1bbb0a3d99207a76f9ed210637c6074 213067 -Muhlemann2018b 2018 10.1073/pnas.1804921115 VK154 GitHub acorg/parvo-2018 VK154 VK154 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK154-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK154-combined.fasta d305c6ab14b58a5cac78311378cc2994 280817 -Muhlemann2018b 2018 10.1073/pnas.1804921115 VK477 GitHub acorg/parvo-2018 VK477 VK477 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK477-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK477-combined.fasta 847d8acbf85793026b8f241d27693c32 610366 -Muhlemann2018b 2018 10.1073/pnas.1804921115 VK6 GitHub acorg/parvo-2018 VK6 VK6 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK6-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK6-combined.fasta 5d4bb520173e0692b0e1232b7775853c 845688 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 17448321 ERR476784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476784/ERR476784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476784/ERR476784_2.fastq.gz 221282b6d8f2c84b0112926ca056a197;68c2676caac9047fb395d9ced9a737d7 1531518242;1518967127 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 7047406 ERR476785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476785/ERR476785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476785/ERR476785_2.fastq.gz c4de0ffa9f953c6a4260d580eb527c99;1ee5ef81a62c9afe5d3ad586007b4375 567376509;557712310 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 25700429 ERR476786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476786/ERR476786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476786/ERR476786_2.fastq.gz 0c93a6c48aa87acad9f46740c183f33f;89a22a6f9ced1607f586e630eab10b2f 2048700503;2015765836 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 73909548 ERR476787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476787/ERR476787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476787/ERR476787_2.fastq.gz 98b38a934fac3f3e6cf830dc57ba15ae;3cb7af3c29606b8a926a0f62480a3938 6554053284;6618846248 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 74001064 ERR476788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476788/ERR476788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476788/ERR476788_2.fastq.gz 650dccbe734713baba7e5f3964bab597;2820e6d472dae1482fa66cebcb4c4aca 6648554470;6727677715 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 SINGLE Unknown 159950709 ERR476799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476799/ERR476799.fastq.gz bee09f2abcaf0e41c2f68b9d863a8459 10460725471 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 3193242 ERR476807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476807/ERR476807_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476807/ERR476807_2.fastq.gz 6a39ecc0a7eaa5de8b617e4968c59202;60a1ced220de7756d2366f9506d8c6e6 266343460;265766090 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 12281898 ERR476808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476808/ERR476808_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476808/ERR476808_2.fastq.gz 34e2dd82c71afccb1b7c8cc7701d9afe;906fc7469a05e0c7e06f65d46f676696 1018066410;1018080234 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947233 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947233/ERR5947233.fastq.gz 43ee2815ae6df7bc02c19150ca554635 63434647 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947234 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947234/ERR5947234.fastq.gz 71e12b925ddb00125032c6014e5fce54 63965052 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947235 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947235/ERR5947235.fastq.gz 31840d11dcf5adc8ac4cd2ca93856e81 63696753 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947236/ERR5947236.fastq.gz 6137873a9d70c2c0b18bdce70c3c5fca 63435824 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947237 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947237/ERR5947237.fastq.gz 4e9e494209a35fab9e7c20fa0fa2bcad 63723564 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947238 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947238/ERR5947238.fastq.gz b4d7477e36fa74ed646e422349cb3ebd 62043626 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947239 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947239/ERR5947239.fastq.gz f488203bf96a8f50f2f5547030833ffe 60739987 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947240 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947240/ERR5947240.fastq.gz c0b3095ad298d12cc4fbf1755679adbb 60972314 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947241/ERR5947241.fastq.gz b3fce1796384fb0aad3494bcc9d54d5a 60798882 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947242 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947242/ERR5947242.fastq.gz af7cf61a6212d18a469cf4d50741131a 60582717 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947243 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947243/ERR5947243.fastq.gz 9c0d98afade28ecd632a17dea5889e08 67697522 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947244 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947244/ERR5947244.fastq.gz 6b421f9afd406f33e41f9cad4a5b0e8a 76610499 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947245 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947245/ERR5947245.fastq.gz dd31d316c4bd5c0af8b42dbc30e0ff27 76850145 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947246 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947246/ERR5947246.fastq.gz e7e37b453ff03b29634d1be273520602 76001848 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947247 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947247/ERR5947247.fastq.gz f9931702dbd0e1b5c704ba2be25d7ded 76708763 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947248 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947248/ERR5947248.fastq.gz 8a9208dcdffe3c5b6cdcf9c9e19db987 75883430 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947249 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947249/ERR5947249.fastq.gz 55b985fba6532167acfe550c1c2a095c 73891974 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947250/ERR5947250.fastq.gz 6ad12e9475938fffac225ea14a558920 74043902 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947251/ERR5947251.fastq.gz 83363b563be35ebcf404a22db48fa851 74199879 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947252/ERR5947252.fastq.gz e5e04eacb60cd8073d8f022834439dee 73633695 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947253/ERR5947253.fastq.gz 051b83b2a3b022e45e4b64036b7874f1 74087066 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947257/ERR5947257.fastq.gz 40be4c3c5720d1e7d16be25a4af46aef 43430701 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947258/ERR5947258.fastq.gz 11c096c01ddc178c1783668531a26464 43450414 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947259/ERR5947259.fastq.gz adda3ceb582187430bd6a8e414725d0b 43379846 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947260 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947260/ERR5947260.fastq.gz 3416fc077508636016ea87e56371a68f 43403217 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947261 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947261/ERR5947261.fastq.gz 1f6cde5a36bf201ec2d0b0470d07bafc 43402754 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947262 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947262/ERR5947262.fastq.gz 476f44e96e66a08d1761544b83abaf84 43570389 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947263 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947263/ERR5947263.fastq.gz 4927bf2da7572c4855db0b047c2041a4 43619527 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947264 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947264/ERR5947264.fastq.gz 24ea42673e10226a299b868481bc638f 43559886 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947265 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947265/ERR5947265.fastq.gz ee1d618c43aa1cfc435cf7f081294f87 43560855 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947266 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947266/ERR5947266.fastq.gz dda87a32af136629aa83f06ee07e68e9 43532856 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947267/ERR5947267.fastq.gz 111c437e266efdf3eb252a56f59c34a0 43444952 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947268/ERR5947268.fastq.gz 681d3f8217cb861e510c1c9dcfb722c1 43585437 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947269/ERR5947269.fastq.gz a693fef286480f225ddc81947831b503 43378479 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947270 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947270/ERR5947270.fastq.gz 35ea5b954916a840a8ec8062eb7fbaf5 43320336 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947271 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947271/ERR5947271.fastq.gz a143460f2aa5d8010dadf161643be4e6 43366222 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947272 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947272/ERR5947272.fastq.gz 5a0da2a51a639d0893649c2324b8c430 43289779 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947273 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947273/ERR5947273.fastq.gz bc76a14575361b3a8d02f12ac6c97def 43376246 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947274 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947274/ERR5947274.fastq.gz c60ae4830447ecf4f603322a0e70f1b1 43386470 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947275 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947275/ERR5947275.fastq.gz d60b36e01430e751852c9d893b5585d8 43621716 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947276 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947276/ERR5947276.fastq.gz 5f044658a0c639a48c1c3be15fa2b33b 43517370 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947277/ERR5947277.fastq.gz f4bc9ca61e6c4dd9a1854ca44f399933 43404196 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947278/ERR5947278.fastq.gz f8c79db41a91657cc8ac6be9825f266c 43400091 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947279/ERR5947279.fastq.gz e74354dda5b353f80ee30e202f7f6c00 43313819 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947280/ERR5947280.fastq.gz ad11c31c781a30a6d28fe3634dc33ba2 43331715 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947281/ERR5947281.fastq.gz 270d3da30d8b0f9fd599189c18da8b82 43353237 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947282/ERR5947282.fastq.gz a88605bebf57280f7cd8847c256e83b4 43288899 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947283/ERR5947283.fastq.gz 3a94d5cd3b1c34b0bb9fe4efc0d7d931 43285987 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947284 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947284/ERR5947284.fastq.gz e9f11dae3e5234eb1b1ccff5e84b45e7 43443179 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947285 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947285/ERR5947285.fastq.gz c538f8356b5531f5ff6c4a83070a1384 43534604 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947286 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947286/ERR5947286.fastq.gz 03614be23629af00968945a37e65f13b 43405237 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947287/ERR5947287.fastq.gz 78f3ac57f0ca21099bb9d7f3aac500ce 43413343 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947288/ERR5947288.fastq.gz 6ae0df78123e818c08169d695fead2a6 43454708 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947289/ERR5947289.fastq.gz 0cd2e37abadbf6d04563265638aaa7cb 43376215 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947290 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947290/ERR5947290.fastq.gz 4f9f043967b01e22938d19b906a22970 43258831 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947291 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947291/ERR5947291.fastq.gz aa9d1dcd79fb0ae91906a724c49b2af0 43270358 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947292 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947292/ERR5947292.fastq.gz 152cd7057e753f525ff0d212a0d81095 43160237 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947293 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947293/ERR5947293.fastq.gz 89a14f2317e32e6da13a822172e57405 43237043 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947297/ERR5947297.fastq.gz 056a066d4e240b08ec369c55be9d8799 43344830 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947298/ERR5947298.fastq.gz d3846b6164f85c56613b02b9ab687453 43337753 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947299/ERR5947299.fastq.gz 7e4494d4c05e25a9888697a73ad1da94 43811597 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947300/ERR5947300.fastq.gz b457231fa133a173e50a4155ef188c5c 43356643 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947301/ERR5947301.fastq.gz 13c0dbd6afd3f703020b4cbc11881d06 43363320 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947302/ERR5947302.fastq.gz 17625a8d44432f77b697898f5517fa23 43269554 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947303/ERR5947303.fastq.gz 2a84ff21b1f6c75fa2e71b150dd394af 43054680 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947307/ERR5947307.fastq.gz 93cc72fa1b579a278de95b3add79829c 43029227 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947308/ERR5947308.fastq.gz ad1a3c8e0392e78c1c598d3eb9ffdce3 43110333 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947309/ERR5947309.fastq.gz e4d01521d83309384cc491bbd738fa82 43200469 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947310 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947317 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947317/ERR5947317.fastq.gz d00464741bd88b15afb1a18a2ce5cead 42900720 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947318 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947318/ERR5947318.fastq.gz 8e2693ff59e74bdda5ba3eb6394f1dc5 43113695 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947319 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947319/ERR5947319.fastq.gz 8b2dbf5fa77b09985bb3881d8f1fa66c 43305800 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947320 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947327 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947327/ERR5947327.fastq.gz 8ee31319cac2752c7f6c303c21830024 43180964 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947328 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947328/ERR5947328.fastq.gz 139b19f554019ad31f66f3fd05c176fc 42951336 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947329 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947329/ERR5947329.fastq.gz 1da00f0a966ca3701f904fea4a02d3e2 43304735 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947330 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947337 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947337/ERR5947337.fastq.gz 56a440f5281734a21df42585f60e596d 43898749 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947338 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947338/ERR5947338.fastq.gz ca704ea241102fc82536c90ff6281a56 43592960 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947339 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947339/ERR5947339.fastq.gz 77718a3c3f3c9a50967a051636504099 43094591 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 177662 ERR5947340 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947340/ERR5947340.fastq.gz 47dce08f29d455eb00490f55c623f685 7733506 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947341 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947341/ERR5947341.fastq.gz 46ab926eb6f556b11c3cba9422a23d67 72906654 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947342 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947342/ERR5947342.fastq.gz 889009269c4f41938228889f16796b51 72770595 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947343 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947343/ERR5947343.fastq.gz 05c56b30124d411ba2357cd639907022 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947347 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947347/ERR5947347.fastq.gz c9879929e80283c47190ed53d2f01a7c 73331401 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947348 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947348/ERR5947348.fastq.gz 411dcd25c9f3ef4db747de0446b5bd19 73147773 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947349 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947349/ERR5947349.fastq.gz 26d7a0a4676fd88b803af1a76a292efc 72729355 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947350 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947357 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947357/ERR5947357.fastq.gz 546cef1dbff4ef8a4d0e6948652778f5 77054903 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947358 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947358/ERR5947358.fastq.gz 98196e6ffe17582a30e1827531cb368a 77838928 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947359 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947359/ERR5947359.fastq.gz 168361c7403899a202b146bf19ee3f54 77757407 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947360 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947377 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947377/ERR5947377.fastq.gz fbd45e7947cbead891cd497dc28be3c4 45794134 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947378 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947378/ERR5947378.fastq.gz 5fc36604017648fea7d7b5e5af3189f5 46366922 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947379 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947379/ERR5947379.fastq.gz a9be124efe3d13ef3c70dbfc310c0bda 46329971 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947380 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947387 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947387/ERR5947387.fastq.gz af047349bf9ebdd95a41439965ccb366 45751223 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947388 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947388/ERR5947388.fastq.gz 3459ad6584531500efd14073708dc929 45690954 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947389 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947389/ERR5947389.fastq.gz fc4cf32c388bd8c865499fa955c13d59 46268561 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947390 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947397 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947397/ERR5947397.fastq.gz fd55dba2d6cac91c0502f9d9312022fb 45756181 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947398/ERR5947398.fastq.gz 723e88e1487cf6f343c087fc33d2ea77 45775281 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947399 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947399/ERR5947399.fastq.gz cfb0ae3dd31f7dade703d6247e849119 45586362 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947400 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947400/ERR5947400.fastq.gz a338deb3789c0ea0ae7c94c999594d2b 45956910 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947401 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947401/ERR5947401.fastq.gz 5a5fa660809d893dd0f41f833d133e2a 46170579 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947402 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947402/ERR5947402.fastq.gz 34a85e1613882d3b31dd684255404154 46150254 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947403 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947403/ERR5947403.fastq.gz 45652aa501d2b28728f62b4970d50e05 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947407/ERR5947407.fastq.gz d6ef2fc4169be2915335ea0a79b420cd 45921526 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947408/ERR5947408.fastq.gz b011e9f116637dda46e6b48d4c18d84e 45757461 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947409/ERR5947409.fastq.gz 1c91ec14cfdd2dc2bc9b2621ef1f76d3 45718938 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947410 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947417 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947417/ERR5947417.fastq.gz d65952626733996a3645c059ae28a7b8 45977500 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947418 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947418/ERR5947418.fastq.gz 37c59ef5dd3f8ee78f24f64653c998e7 45982080 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947419 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947419/ERR5947419.fastq.gz 3bfc720abf07dd16c6518cd84ddbc6cd 45970961 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947420 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947427 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947427/ERR5947427.fastq.gz b94bf27521d5036855889fd190ca1f7b 46063814 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947428 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947428/ERR5947428.fastq.gz f9a6a8dc3b8d2471f9a30a9b972999c5 45946797 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947429 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947429/ERR5947429.fastq.gz 2de6a78c5f9c56fea3a52b22a9160661 45887842 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947430 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947437 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947437/ERR5947437.fastq.gz 937b8b7eb035f1b26e0282bdd500df95 46174443 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947438 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947438/ERR5947438.fastq.gz 9b939aa81850e91c21c95b2a5be19540 46195494 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947439 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947439/ERR5947439.fastq.gz 61118a310fc924e492efc8c13bed1cec 46236107 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947440 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947447 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947447/ERR5947447.fastq.gz 29261a983d84c3e9b6e174b19fb51c08 46494416 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947448 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947448/ERR5947448.fastq.gz 3da85a85c4ab861df2796a96aac83928 46488119 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947449 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947449/ERR5947449.fastq.gz a0404b49663a0a17d06377e40c86b403 46309490 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947450 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947477 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947477/ERR5947477.fastq.gz 8723fa6122f96474cd58ae2b860cdb95 45929909 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947478/ERR5947478.fastq.gz e01850b223acb3893f74bb6ac93bd913 45936068 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947479/ERR5947479.fastq.gz 2c7d45e8b1927bb4439651a3394446a5 46317423 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947480 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947487 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947487/ERR5947487.fastq.gz 311d5f120eb76b6c6b8a0232b0c60555 45838283 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947488 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947488/ERR5947488.fastq.gz 7aab4aacc959b6ad87daf7266986dc77 45847736 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947489 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947489/ERR5947489.fastq.gz 16f57d891e8f1c5a97f6a024e274cc52 45847317 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947490 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947497 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947497/ERR5947497.fastq.gz 4cd5b096a279edb5dd631ffa2ac04a1a 45775816 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947498/ERR5947498.fastq.gz 5ac1ed0bb718e6d53233c20509ab7f2d 45753667 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947499 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947499/ERR5947499.fastq.gz fe3a6626c0ce73b68fae4e2985f009f8 45790942 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947500 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947500/ERR5947500.fastq.gz 9c0c6e08bc5350ae0ff13a4bfc5e446a 45841886 -DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 315081 ERR5947501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947501/ERR5947501.fastq.gz ca8583e019cc707cee1199dce34a9503 14421106 -Granehall2021 2021 10.1186/s40168-021-01132-8 2102 ENA PRJEB43389 ERS6205401 2102 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 21344616 ERR5670969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR567/009/ERR5670969/ERR5670969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR567/009/ERR5670969/ERR5670969_2.fastq.gz 1548e1beb98d29bc48dacc733fa70a6d;9e055de188c1b178c86b19028714ea4d 482055984;496434335 -Kocher2021 2021 10.1126/science.abi5658 ADR001 ENA PRJEB45699 ERS6597748 ADR001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 59 ERR6053580 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053580/ERR6053580.fastq.gz 8253e6fcb83eb618347f882084e6f6ed 3400 -Kocher2021 2021 10.1126/science.abi5658 AKB003 ENA PRJEB45699 ERS6597749 AKB003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6027 ERR6053581 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053581/ERR6053581.fastq.gz 2d6013cca1bb3dbac1b9f3a297b3e85f 255666 -Kocher2021 2021 10.1126/science.abi5658 ALA098 ENA PRJEB45699 ERS6597750 ALA098.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 116 ERR6053582 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053582/ERR6053582.fastq.gz 727d6b71d071c1311aa1ff210fd175ab 6230 -Kocher2021 2021 10.1126/science.abi5658 ALA110 ENA PRJEB45699 ERS6597751 ALA110.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 147 ERR6053583 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053583/ERR6053583.fastq.gz 1c5b9aac7e6e570c757b9099a2cbd69a 5001 -Kocher2021 2021 10.1126/science.abi5658 ARM001 ENA PRJEB45699 ERS6597752 ARM001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3248 ERR6053584 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053584/ERR6053584.fastq.gz 85daed8a7edcb5b16bb1cb6036d758ef 78050 -Kocher2021 2021 10.1126/science.abi5658 ARM0023 ENA PRJEB45699 ERS6597753 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 439 ERR6053585 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053585/ERR6053585.fastq.gz 7a7ae7fb7a012e5856b3f074c126fd62 12016 -Kocher2021 2021 10.1126/science.abi5658 ART005 ENA PRJEB45699 ERS6597754 ART005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 32 ERR6053586 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053586/ERR6053586.fastq.gz f5304d08e116d2a1c2936e55e92499d4 1223 -Kocher2021 2021 10.1126/science.abi5658 ART024 ENA PRJEB45699 ERS6597755 ART024.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 67 ERR6053587 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053587/ERR6053587.fastq.gz a8f0f28e5e74982cfbf437a076efc988 2045 -Kocher2021 2021 10.1126/science.abi5658 BNL005 ENA PRJEB45699 ERS6597756 BNL005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 413 ERR6053588 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053588/ERR6053588.fastq.gz b8f6f711c4de4f1d08e861c950cc74d3 14563 -Kocher2021 2021 10.1126/science.abi5658 BON020 ENA PRJEB45699 ERS6597757 BON020.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 369 ERR6053589 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053589/ERR6053589.fastq.gz 61a2748d4c7d9c666c3a2b247e1ced7d 10806 -Kocher2021 2021 10.1126/science.abi5658 BOO006 ENA PRJEB45699 ERS6597758 BOO006.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1067 ERR6053590 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053590/ERR6053590.fastq.gz b6be2d65e2b5ef9372819611b11c2d71 28668 -Kocher2021 2021 10.1126/science.abi5658 BOO008 ENA PRJEB45699 ERS6597759 BOO008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5323 ERR6053591 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053591/ERR6053591.fastq.gz b26258c46c43fbad2affdfe6cc913aa3 131403 -Kocher2021 2021 10.1126/science.abi5658 BRE008 ENA PRJEB45699 ERS6597760 BRE008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1459 ERR6053592 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053592/ERR6053592.fastq.gz 813a5e8ff44f310261897e3f152d8f5c 61140 -Kocher2021 2021 10.1126/science.abi5658 BRE026 ENA PRJEB45699 ERS6597761 BRE026.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2830 ERR6053593 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053593/ERR6053593.fastq.gz afce6e7f33bd132a31ac0a9d8d1f3b79 147893 -Kocher2021 2021 10.1126/science.abi5658 BRE028 ENA PRJEB45699 ERS6597762 BRE028.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2338 ERR6053594 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053594/ERR6053594.fastq.gz 5b1e217e39b126f7d9848a906151f588 127411 -Kocher2021 2021 10.1126/science.abi5658 CAA002 ENA PRJEB45699 ERS6597763 CAA002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 58 ERR6053595 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053595/ERR6053595.fastq.gz cdf661a0162db3fa56d8d14590d327ae 2058 -Kocher2021 2021 10.1126/science.abi5658 CAO009 ENA PRJEB45699 ERS6597764 CAO009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1301 ERR6053596 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053596/ERR6053596.fastq.gz 92f1941d3c3211e6c8b2d34d79149c29 46626 -Kocher2021 2021 10.1126/science.abi5658 CHA003 ENA PRJEB45699 ERS6597765 CHA003.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 188 ERR6053597 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053597/ERR6053597.fastq.gz 2a92ef1fb264594f6205e74ed0c84084 6297 -Kocher2021 2021 10.1126/science.abi5658 CHT001 ENA PRJEB45699 ERS6597766 CHT001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 865 ERR6053598 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053598/ERR6053598.fastq.gz 11fa858c0b9a6977a34beca59aa4e72b 29165 -Kocher2021 2021 10.1126/science.abi5658 CLL005 ENA PRJEB45699 ERS6597767 CLL005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 704 ERR6053599 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053599/ERR6053599.fastq.gz 3dcae3a7f551f38f7b218bbc98f1774a 26884 -Kocher2021 2021 10.1126/science.abi5658 CUN002 ENA PRJEB45699 ERS6597768 CUN002.D0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 172 ERR6053600 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053600/ERR6053600.fastq.gz aa94eff253e19219f85650ea9879a6d4 6902 -Kocher2021 2021 10.1126/science.abi5658 DER027 ENA PRJEB45699 ERS6597769 DER027.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1176 ERR6053601 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053601/ERR6053601.fastq.gz 3fbb07f85b11ee39d3e828dd501daa0a 35794 -Kocher2021 2021 10.1126/science.abi5658 DOG007 ENA PRJEB45699 ERS6597770 DOG007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 14 ERR6053602 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053602/ERR6053602.fastq.gz 868b0f00a855b342f749c5d1b63473e8 754 -Kocher2021 2021 10.1126/science.abi5658 ELT005 ENA PRJEB45699 ERS6597771 ELT005.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5111 ERR6053603 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053603/ERR6053603.fastq.gz 68edfb11cc84a023f41c1b71ffe4334a 137769 -Kocher2021 2021 10.1126/science.abi5658 ELT006 ENA PRJEB45699 ERS6597772 ELT006.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4675 ERR6053604 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053604/ERR6053604.fastq.gz 91af68f869a0331902cc30b21522e042 123945 -Kocher2021 2021 10.1126/science.abi5658 GGN005 ENA PRJEB45699 ERS6597773 GGN005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 205 ERR6053605 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053605/ERR6053605.fastq.gz 833dfe9d162d0673900586dfffdba0a8 9817 -Kocher2021 2021 10.1126/science.abi5658 GRG001 ENA PRJEB45699 ERS6597774 GRG001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1499 ERR6053606 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053606/ERR6053606.fastq.gz 346bc1768a01984f7409265bbc037630 34270 -Kocher2021 2021 10.1126/science.abi5658 GRG036 ENA PRJEB45699 ERS6597775 GRG036.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 793 ERR6053607 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053607/ERR6053607.fastq.gz e73c957b641bfc20acee71eeef67da5c 25023 -Kocher2021 2021 10.1126/science.abi5658 HAL05 ENA PRJEB45699 ERS6597776 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4948 ERR6053608 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053608/ERR6053608.fastq.gz b5a0c599871fcc5060148e24e9cb9df8 213843 -Kocher2021 2021 10.1126/science.abi5658 HAL15 ENA PRJEB45699 ERS6597777 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 5543 ERR6053609 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053609/ERR6053609.fastq.gz d1845d05892ed06e8726f588fdff1d1e 201580 -Kocher2021 2021 10.1126/science.abi5658 HOP004 ENA PRJEB45699 ERS6597778 HOP004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1200 ERR6053610 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053610/ERR6053610.fastq.gz 61d73a542d493bed202efdbc319b065e 38109 -Kocher2021 2021 10.1126/science.abi5658 HSL001 ENA PRJEB45699 ERS6597779 HSL001.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 316 ERR6053611 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053611/ERR6053611.fastq.gz 916ec7d96cc2bb29c42d36217eeeda50 9121 -Kocher2021 2021 10.1126/science.abi5658 HUA056 ENA PRJEB45699 ERS6597780 HUA056.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 94 ERR6053612 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053612/ERR6053612.fastq.gz 861f21a8cd93d20c7dab4d0c9ac80a5e 4333 -Kocher2021 2021 10.1126/science.abi5658 HUA063 ENA PRJEB45699 ERS6597781 HUA063.A0102 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 11 ERR6053613 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053613/ERR6053613.fastq.gz 0a23f779c421bfd1158cea51a9723da8 548 -Kocher2021 2021 10.1126/science.abi5658 I0061 ENA PRJEB45699 ERS6597782 XXX001.A161019 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 1571 ERR6053614 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053614/ERR6053614.fastq.gz de0dd45c052fd06dd51fceacbd777937 40197 -Kocher2021 2021 10.1126/science.abi5658 I0100 ENA PRJEB45699 ERS6597783 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1363 ERR6053615 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053615/ERR6053615.fastq.gz 65ddb321d82426881ef8b896456eccfd 45286 -Kocher2021 2021 10.1126/science.abi5658 I0104 ENA PRJEB45699 ERS6597784 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1810 ERR6053616 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053616/ERR6053616.fastq.gz b36e95e5f6e63e38d21723f26a112149 55010 -Kocher2021 2021 10.1126/science.abi5658 I0111 ENA PRJEB45699 ERS6597785 XXX001.A161203 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 45 ERR6053617 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053617/ERR6053617.fastq.gz 74830b5a7473333a410719a65842e9db 1954 -Kocher2021 2021 10.1126/science.abi5658 I0157 ENA PRJEB45699 ERS6597786 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2491 ERR6053618 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053618/ERR6053618.fastq.gz 26426154a189ae056eb0d1561bc9281a 99533 -Kocher2021 2021 10.1126/science.abi5658 I0161 ENA PRJEB45699 ERS6597787 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2433 ERR6053619 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053619/ERR6053619.fastq.gz 7d3c57b2ed94bf6727e7c69a5a84dca6 82117 -Kocher2021 2021 10.1126/science.abi5658 I0162 ENA PRJEB45699 ERS6597788 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 43 ERR6053620 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053620/ERR6053620.fastq.gz 87b36333c29d3efc1abf7b36550f8bc8 2183 -Kocher2021 2021 10.1126/science.abi5658 I0163 ENA PRJEB45699 ERS6597789 XXX001.A161062 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 35 ERR6053621 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053621/ERR6053621.fastq.gz 1d71fc2a37cb80eb31381e396937d326 1818 -Kocher2021 2021 10.1126/science.abi5658 I0216 ENA PRJEB45699 ERS6597790 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 3056 ERR6053622 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053622/ERR6053622.fastq.gz 891a553749a497a43047c65e292c182a 119529 -Kocher2021 2021 10.1126/science.abi5658 I0217 ENA PRJEB45699 ERS6597791 XXX001.A16562 double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 471 ERR6053623 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053623/ERR6053623.fastq.gz 902691363b8f5227ed359e01f0aefbe5 17823 -Kocher2021 2021 10.1126/science.abi5658 I0411 ENA PRJEB45699 ERS6597792 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2100 ERR6053624 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053624/ERR6053624.fastq.gz 2c15ab3a9a1339000d6fe5a20d2b2825 55412 -Kocher2021 2021 10.1126/science.abi5658 I0461 ENA PRJEB45699 ERS6597793 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 3496 ERR6053625 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053625/ERR6053625.fastq.gz 214bb4836d71ae1d5a6381549791b909 89172 -Kocher2021 2021 10.1126/science.abi5658 I0551 ENA PRJEB45699 ERS6597794 XXX001.A161111 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 835 ERR6053626 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053626/ERR6053626.fastq.gz d75e905ce8b5220cb5f525397cbba442 24230 -Kocher2021 2021 10.1126/science.abi5658 I0554 ENA PRJEB45699 ERS6597795 XXX001.A161114 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7 ERR6053627 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053627/ERR6053627.fastq.gz 051c141c05ee7b0c21f6e1383dc42867 390 -Kocher2021 2021 10.1126/science.abi5658 I0784 ENA PRJEB45699 ERS6597796 XXX001.A161154 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 538 ERR6053628 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053628/ERR6053628.fastq.gz 81a4d2d846c3082a7a2493a05e5ff4ae 13784 -Kocher2021 2021 10.1126/science.abi5658 I0795 ENA PRJEB45699 ERS6597797 XXX001.A161165 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1898 ERR6053629 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053629/ERR6053629.fastq.gz 9fd507bb8bbd41eefbe98255b4b4490d 46256 -Kocher2021 2021 10.1126/science.abi5658 I0796 ENA PRJEB45699 ERS6597798 XXX001.A161166 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 137 ERR6053630 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053630/ERR6053630.fastq.gz f586cf174dc4b09f0deaccd9a38beb7c 4654 -Kocher2021 2021 10.1126/science.abi5658 I0797 ENA PRJEB45699 ERS6597799 XXX001.A161167 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 122 ERR6053631 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053631/ERR6053631.fastq.gz a9e520af283e9771f0bfd4c0ef3bdf0c 5070 -Kocher2021 2021 10.1126/science.abi5658 I0798 ENA PRJEB45699 ERS6597800 XXX001.A161168 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 442 ERR6053632 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053632/ERR6053632.fastq.gz 54271bb0126e863560251a6c6eb4179a 18782 -Kocher2021 2021 10.1126/science.abi5658 I0960 ENA PRJEB45699 ERS6597801 XXX001.A161227 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 103 ERR6053633 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053633/ERR6053633.fastq.gz 0d041f4a2ed9b23f419d160941caaa49 4025 -Kocher2021 2021 10.1126/science.abi5658 I0972 ENA PRJEB45699 ERS6597802 XXX001.A161239 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8 ERR6053634 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053634/ERR6053634.fastq.gz 09ef907de6a9ab2933802ac765b1cda2 397 -Kocher2021 2021 10.1126/science.abi5658 I1321 ENA PRJEB45699 ERS6597803 XXX001.A161295 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 920 ERR6053635 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053635/ERR6053635.fastq.gz ef8d96ca4ed8ecbd5e3211278f349a84 36490 -Kocher2021 2021 10.1126/science.abi5658 I1344 ENA PRJEB45699 ERS6597804 XXX001.A161318 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4093 ERR6053636 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053636/ERR6053636.fastq.gz 9fa610e44ba80b543c089d3403c32e73 103492 -Kocher2021 2021 10.1126/science.abi5658 I2005 ENA PRJEB45699 ERS6597805 XXX001.A161356 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 222 ERR6053637 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053637/ERR6053637.fastq.gz e7c2d7de69da79fc3c3a3633be1df4aa 8706 -Kocher2021 2021 10.1126/science.abi5658 I2006 ENA PRJEB45699 ERS6597806 XXX001.A161357 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 98 ERR6053638 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053638/ERR6053638.fastq.gz 9027eafe914a5c5f20c4226a2c2a5b16 4079 -Kocher2021 2021 10.1126/science.abi5658 I2017 ENA PRJEB45699 ERS6597807 XXX001.A161368 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17 ERR6053639 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053639/ERR6053639.fastq.gz 9419860079a267382bb5912d17825b89 709 -Kocher2021 2021 10.1126/science.abi5658 I2020 ENA PRJEB45699 ERS6597808 XXX001.A161371 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 365 ERR6053640 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053640/ERR6053640.fastq.gz ab7765291fe43f4b406350fadb976866 14286 -Kocher2021 2021 10.1126/science.abi5658 I2027 ENA PRJEB45699 ERS6597809 XXX001.A161378 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19 ERR6053641 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053641/ERR6053641.fastq.gz 269735aef94a534f966e6d8664d3cf76 908 -Kocher2021 2021 10.1126/science.abi5658 I2031 ENA PRJEB45699 ERS6597810 XXX001.A161382 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1075 ERR6053642 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053642/ERR6053642.fastq.gz f276f18f5823ceec4080a8ba2bc69739 44735 -Kocher2021 2021 10.1126/science.abi5658 I2032 ENA PRJEB45699 ERS6597811 XXX001.A161383 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 36 ERR6053643 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053643/ERR6053643.fastq.gz e41f15526a5973d0be74a091b1d693ba 1453 -Kocher2021 2021 10.1126/science.abi5658 IKI009 ENA PRJEB45699 ERS6597812 IKI009.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 293 ERR6053644 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053644/ERR6053644.fastq.gz b6dee4a538f52d1d8d93e453ff80b6dd 8965 -Kocher2021 2021 10.1126/science.abi5658 ISB002 ENA PRJEB45699 ERS6597813 ISB002.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1820 ERR6053645 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053645/ERR6053645.fastq.gz 354cbe54177bf1c318d182e878cbcf15 59237 -Kocher2021 2021 10.1126/science.abi5658 JAZ001 ENA PRJEB45699 ERS6597814 JAZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1235 ERR6053646 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053646/ERR6053646.fastq.gz 6a460ca60b09bd14d75c95642e353eea 36177 -Kocher2021 2021 10.1126/science.abi5658 KAP002 ENA PRJEB45699 ERS6597815 KAP002.A0202 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4530 ERR6053647 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053647/ERR6053647.fastq.gz 679c187b21f3dc727510e80683147274 210442 -Kocher2021 2021 10.1126/science.abi5658 KBD002 ENA PRJEB45699 ERS6597816 KBD002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1032 ERR6053648 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053648/ERR6053648.fastq.gz 64e55b044e60523f8e32674d2265832f 27987 -Kocher2021 2021 10.1126/science.abi5658 KDC001 ENA PRJEB45699 ERS6597817 KDC001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 18 ERR6053649 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053649/ERR6053649.fastq.gz 1fb787c26300e0b2befa2460e6ca3f89 1299 -Kocher2021 2021 10.1126/science.abi5658 KEL045 ENA PRJEB45699 ERS6597818 KEL045.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12 ERR6053650 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053650/ERR6053650.fastq.gz 1361112564111f2715a0877a9bcf9684 797 -Kocher2021 2021 10.1126/science.abi5658 KIL044 ENA PRJEB45699 ERS6597819 KIL044.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2596 ERR6053651 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053651/ERR6053651.fastq.gz 02b23211b5a91c4b96708366b83f971e 122042 -Kocher2021 2021 10.1126/science.abi5658 KLE031 ENA PRJEB45699 ERS6597820 KLE031.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6480 ERR6053652 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053652/ERR6053652.fastq.gz 4830865c306060a82b55b4b12714cb49 171100 -Kocher2021 2021 10.1126/science.abi5658 KRA001 ENA PRJEB45699 ERS6597821 KRA001.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1598 ERR6053653 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053653/ERR6053653.fastq.gz 2bd5d939584768115daf6960a9009448 101813 -Kocher2021 2021 10.1126/science.abi5658 KRA010 ENA PRJEB45699 ERS6597822 KRA010.F0101 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1749 ERR6053654 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053654/ERR6053654.fastq.gz 9797a82d1264aed202657c3d1263116c 102609 -Kocher2021 2021 10.1126/science.abi5658 KUE033 ENA PRJEB45699 ERS6597823 KUE033.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 794 ERR6053655 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053655/ERR6053655.fastq.gz 0fc10068a32b2e17596cfefdc07a061d 32550 -Kocher2021 2021 10.1126/science.abi5658 KVK001 ENA PRJEB45699 ERS6597824 KVK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 351 ERR6053656 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053656/ERR6053656.fastq.gz a6e9348f2afece33e8bc8892a85fd572 9659 -Kocher2021 2021 10.1126/science.abi5658 LEU065 ENA PRJEB45699 ERS6597825 LEU065.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 985 ERR6053657 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053657/ERR6053657.fastq.gz a5595a7ad821ceb1d3dfa8f53f12e719 35556 -Kocher2021 2021 10.1126/science.abi5658 Loschbour ENA PRJEB45699 ERS6597826 unspecified unknown Unknown unknown Illumina HiSeq 4000 SINGLE WGS 795 ERR6053658 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053658/ERR6053658.fastq.gz 822c533dd769c4559956d50645d21e1f 18137 -Kocher2021 2021 10.1126/science.abi5658 MAP007 ENA PRJEB45699 ERS6597827 MAP007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 353 ERR6053659 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053659/ERR6053659.fastq.gz bd11ebfe7b182268876eb4d20b1ff1a6 9439 -Kocher2021 2021 10.1126/science.abi5658 MAY017 ENA PRJEB45699 ERS6597828 MAY017.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2323 ERR6053660 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053660/ERR6053660.fastq.gz 7d54e28c3fa93ca9e0189f595ded516d 113618 -Kocher2021 2021 10.1126/science.abi5658 MIB003 ENA PRJEB45699 ERS6597829 MIB003.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 696 ERR6053661 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053661/ERR6053661.fastq.gz 6f9bc14aa1771352fdfa8d84735356d1 18947 -Kocher2021 2021 10.1126/science.abi5658 MIB011 ENA PRJEB45699 ERS6597830 MIB011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 295 ERR6053662 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053662/ERR6053662.fastq.gz ce26ffbf802d085cf341c04be44d4662 9055 -Kocher2021 2021 10.1126/science.abi5658 MIB040 ENA PRJEB45699 ERS6597831 MIB040.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6323 ERR6053663 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053663/ERR6053663.fastq.gz cbe0c1a83d9f4414e7445be2b4c11b88 276756 -Kocher2021 2021 10.1126/science.abi5658 MIB041 ENA PRJEB45699 ERS6597832 MIB041.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5186 ERR6053664 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053664/ERR6053664.fastq.gz c628cd088e888a42b593c89fbca3f78b 198284 -Kocher2021 2021 10.1126/science.abi5658 MIS002 ENA PRJEB45699 ERS6597833 MIS002.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 347 ERR6053665 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053665/ERR6053665.fastq.gz d50d4ba75b3f4d5bdcf4e4c49d7163f7 12608 -Kocher2021 2021 10.1126/science.abi5658 MK5004 ENA PRJEB45699 ERS6597834 MK5004.D0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2986 ERR6053666 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053666/ERR6053666.fastq.gz 1cf50351b7d9080f05235cffe602b4d9 66768 -Kocher2021 2021 10.1126/science.abi5658 MK5009 ENA PRJEB45699 ERS6597835 MK5009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2272 ERR6053667 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053667/ERR6053667.fastq.gz 594eb18a1b1c0adcd032793fc1219896 49486 -Kocher2021 2021 10.1126/science.abi5658 MKL025 ENA PRJEB45699 ERS6597836 MKL025.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1872 ERR6053668 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053668/ERR6053668.fastq.gz 9a1a1a10c4e0c451520e2f589f0db205 70532 -Kocher2021 2021 10.1126/science.abi5658 MLR005 ENA PRJEB45699 ERS6597837 MLR005.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 707 ERR6053669 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053669/ERR6053669.fastq.gz 66280817e5f48bf8501bf0061bee96e4 27531 -Kocher2021 2021 10.1126/science.abi5658 MN2003 ENA PRJEB45699 ERS6597838 MN2003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 340 ERR6053670 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053670/ERR6053670.fastq.gz 551082a251e17fdbf33876b5acfd02c4 9169 -Kocher2021 2021 10.1126/science.abi5658 MOT001 ENA PRJEB45699 ERS6597839 MOT001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2391 ERR6053671 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053671/ERR6053671.fastq.gz 0035814de5c49b8d51f0867a2b543511 58295 -Kocher2021 2021 10.1126/science.abi5658 MPR001 ENA PRJEB45699 ERS6597840 MPR001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 441 ERR6053672 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053672/ERR6053672.fastq.gz aefa6b57ec6842c5aa2f9537655a600a 11207 -Kocher2021 2021 10.1126/science.abi5658 MUR007 ENA PRJEB45699 ERS6597841 MUR007.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 801 ERR6053673 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053673/ERR6053673.fastq.gz df634b4d4a75400ff1affc878233e654 34061 -Kocher2021 2021 10.1126/science.abi5658 NV3001 ENA PRJEB45699 ERS6597842 NV3001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19 ERR6053674 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053674/ERR6053674.fastq.gz 76ba890c28a59d127f33c2cc38685084 1042 -Kocher2021 2021 10.1126/science.abi5658 OAI017 ENA PRJEB45699 ERS6597843 OAI017.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2252 ERR6053675 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053675/ERR6053675.fastq.gz 3b7ce0086258ec5f39fc3347d5ca9cc9 106915 -Kocher2021 2021 10.1126/science.abi5658 OOH025 ENA PRJEB45699 ERS6597844 OOH025.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1614 ERR6053676 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053676/ERR6053676.fastq.gz b7c8cff7e4a4c0b7da75f3173bcc7e03 49944 -Kocher2021 2021 10.1126/science.abi5658 ORE002 ENA PRJEB45699 ERS6597845 ORE002.A0104 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2715 ERR6053677 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053677/ERR6053677.fastq.gz 1fecdfa7a3c13179318031d0d07f398b 93608 -Kocher2021 2021 10.1126/science.abi5658 PDA001 ENA PRJEB45699 ERS6597846 PDA001.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1414 ERR6053678 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053678/ERR6053678.fastq.gz 8ab965e098e957b77a5da4cdfa19ae78 79499 -Kocher2021 2021 10.1126/science.abi5658 PDA003 ENA PRJEB45699 ERS6597847 PDA003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1162 ERR6053679 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053679/ERR6053679.fastq.gz 9c9db153ff6702f9f6a0a7c7dcde29b0 50293 -Kocher2021 2021 10.1126/science.abi5658 PEN003 ENA PRJEB45699 ERS6597848 PEN003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 366 ERR6053680 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053680/ERR6053680.fastq.gz cce327677d0b22bcc75d97510e9c6447 9907 -Kocher2021 2021 10.1126/science.abi5658 PLS004 ENA PRJEB45699 ERS6597849 PLS004.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2811 ERR6053681 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053681/ERR6053681.fastq.gz 70938e4e7a8702955053b4078df9e157 118518 -Kocher2021 2021 10.1126/science.abi5658 PLZ001 ENA PRJEB45699 ERS6597850 PLZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2372 ERR6053682 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053682/ERR6053682.fastq.gz 67dedf837babe66260d97715597b0c72 54153 -Kocher2021 2021 10.1126/science.abi5658 QUE004 ENA PRJEB45699 ERS6597851 QUE004.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 95 ERR6053683 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053683/ERR6053683.fastq.gz f856e7d03b4c685b830833b81cf36b56 4060 -Kocher2021 2021 10.1126/science.abi5658 RMI002 ENA PRJEB45699 ERS6597852 RMI002.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 4369 ERR6053684 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053684/ERR6053684.fastq.gz 5d0058825b088735f19dc53733369c11 196308 -Kocher2021 2021 10.1126/science.abi5658 SEC006 ENA PRJEB45699 ERS6597853 SEC006.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1118 ERR6053685 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053685/ERR6053685.fastq.gz c5640a00537072b500bf4db61c24e594 30801 -Kocher2021 2021 10.1126/science.abi5658 SED009 ENA PRJEB45699 ERS6597854 SED009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 286 ERR6053686 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053686/ERR6053686.fastq.gz eacffe52474c4e80fb4c4f2374ee328b 13411 -Kocher2021 2021 10.1126/science.abi5658 SGR003 ENA PRJEB45699 ERS6597855 SGR003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2734 ERR6053687 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053687/ERR6053687.fastq.gz cfbcf4a2dcfad465be90a303701b027b 66727 -Kocher2021 2021 10.1126/science.abi5658 SGR004 ENA PRJEB45699 ERS6597856 SGR004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 520 ERR6053688 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053688/ERR6053688.fastq.gz 4d5d243aa8e2d0e35b46b36e9ac27c20 13999 -Kocher2021 2021 10.1126/science.abi5658 SHK001 ENA PRJEB45699 ERS6597857 SHK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1017 ERR6053689 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053689/ERR6053689.fastq.gz 3cffadf2caca415fd3cbc471b53ee781 47282 -Kocher2021 2021 10.1126/science.abi5658 SID005 ENA PRJEB45699 ERS6597858 SID005.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1246 ERR6053690 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053690/ERR6053690.fastq.gz 64b340381015573135ad40b5ab994e7b 36692 -Kocher2021 2021 10.1126/science.abi5658 SJN005 ENA PRJEB45699 ERS6597859 SJN005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28 ERR6053691 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053691/ERR6053691.fastq.gz 7c5a333582ec3b50a325356d738c4206 1332 -Kocher2021 2021 10.1126/science.abi5658 SJN013 ENA PRJEB45699 ERS6597860 SJN013.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1139 ERR6053692 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053692/ERR6053692.fastq.gz d48cc97628810aaa17386f6c3bfb6ed4 30644 -Kocher2021 2021 10.1126/science.abi5658 SMH004 ENA PRJEB45699 ERS6597861 SMH004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 104 ERR6053693 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053693/ERR6053693.fastq.gz 413e75f3f8b4863f604fff3f789cbf18 3423 -Kocher2021 2021 10.1126/science.abi5658 STR144 ENA PRJEB45699 ERS6597862 STR144.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2332 ERR6053694 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053694/ERR6053694.fastq.gz d53f30ecca2575f9f0e5783bee1ae053 93489 -Kocher2021 2021 10.1126/science.abi5658 SUA002 ENA PRJEB45699 ERS6597863 SUA002.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 208 ERR6053695 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053695/ERR6053695.fastq.gz 628bbffbfcab48ab9f79a809c336913a 10699 -Kocher2021 2021 10.1126/science.abi5658 SUA007 ENA PRJEB45699 ERS6597864 SUA007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 128 ERR6053696 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053696/ERR6053696.fastq.gz 85fd5848ebd386964b0e9efb996e9e34 7930 -Kocher2021 2021 10.1126/science.abi5658 TRI011 ENA PRJEB45699 ERS6597865 TRI011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2289 ERR6053697 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053697/ERR6053697.fastq.gz 1ad69e179f0095a063b254058f52cc62 55453 -Kocher2021 2021 10.1126/science.abi5658 TTK002 ENA PRJEB45699 ERS6597866 TTK002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 29 ERR6053698 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053698/ERR6053698.fastq.gz 901ca383ea4c3579859a287f8d1b79cb 999 -Kocher2021 2021 10.1126/science.abi5658 UOO011 ENA PRJEB45699 ERS6597867 UOO011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 143 ERR6053699 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053699/ERR6053699.fastq.gz e9934e63c2ef7a7dafa0aa372937b8e5 4589 -Kocher2021 2021 10.1126/science.abi5658 UOO024 ENA PRJEB45699 ERS6597868 UOO024.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 46 ERR6053700 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053700/ERR6053700.fastq.gz 2b03e2c8c967529c000a98a851ff3a5a 1726 -Kocher2021 2021 10.1126/science.abi5658 UOO033 ENA PRJEB45699 ERS6597869 UOO033.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 357 ERR6053701 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053701/ERR6053701.fastq.gz ba20baa24d69135be60b8c084642b5af 9266 -Kocher2021 2021 10.1126/science.abi5658 UZZ061 ENA PRJEB45699 ERS6597870 UZZ061.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 6409 ERR6053702 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053702/ERR6053702.fastq.gz 4c8aaaeb0705447e83a90a4022100e7a 281837 -Kocher2021 2021 10.1126/science.abi5658 UZZ075 ENA PRJEB45699 ERS6597871 UZZ075.A0201 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3044 ERR6053703 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053703/ERR6053703.fastq.gz 9b0f06b244af64f09de6bc508486dc23 73804 -Kocher2021 2021 10.1126/science.abi5658 UZZ081 ENA PRJEB45699 ERS6597872 UZZ081.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2793 ERR6053704 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053704/ERR6053704.fastq.gz 87b6545e4ec4144517d94a2ec60a0407 88019 -Kocher2021 2021 10.1126/science.abi5658 UZZ099 ENA PRJEB45699 ERS6597873 UZZ099.A0201 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3512 ERR6053705 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053705/ERR6053705.fastq.gz a230130381d5ca36814465afbb656ccf 102901 -Kocher2021 2021 10.1126/science.abi5658 VAR021 ENA PRJEB45699 ERS6597874 VAR021.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 42 ERR6053706 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053706/ERR6053706.fastq.gz 3d0e6ce51335e1ee4a4563b48c4b285e 1461 -Kocher2021 2021 10.1126/science.abi5658 VLI016 ENA PRJEB45699 ERS6597875 VLI016.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 257 ERR6053707 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053707/ERR6053707.fastq.gz 81feb844e7da1e555e0594ed03f2b5bf 14349 -Kocher2021 2021 10.1126/science.abi5658 VLI060 ENA PRJEB45699 ERS6597876 VLI060.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 786 ERR6053708 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053708/ERR6053708.fastq.gz 2a2c0ddc10b4f496aa6a9221f3da9a92 24670 -Kocher2021 2021 10.1126/science.abi5658 VTZ008 ENA PRJEB45699 ERS6597877 VTZ008.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 350 ERR6053709 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053709/ERR6053709.fastq.gz 8a7d6e0a0d9926ca18311298a517cd2c 12820 -Kocher2021 2021 10.1126/science.abi5658 VTZ011 ENA PRJEB45699 ERS6597878 VTZ011.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2312 ERR6053710 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053710/ERR6053710.fastq.gz ab1ba4203a811ae69a1589e00bd0fcd0 76359 -Kocher2021 2021 10.1126/science.abi5658 WEH008 ENA PRJEB45699 ERS6597879 WEH008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 917 ERR6053711 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053711/ERR6053711.fastq.gz 982c8356dcba87f9d85b30c1f04f8bd2 22857 -Kocher2021 2021 10.1126/science.abi5658 WEH009 ENA PRJEB45699 ERS6597880 WEH009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3244 ERR6053712 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053712/ERR6053712.fastq.gz f3c121103cf4f7a85ccae86c3e0f9a0a 79921 -Kocher2021 2021 10.1126/science.abi5658 WSN010 ENA PRJEB45699 ERS6597881 WSN010.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 38 ERR6053713 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053713/ERR6053713.fastq.gz efe3b5988d7a6c1eb45759989e9ef398 1677 -Kocher2021 2021 10.1126/science.abi5658 WSN012 ENA PRJEB45699 ERS6597882 WSN012.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 370 ERR6053714 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053714/ERR6053714.fastq.gz 817da88d92b341dcb9af19572e8e3cd5 12574 -Kocher2021 2021 10.1126/science.abi5658 YUN048 ENA PRJEB45699 ERS6597883 YUN048.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 824 ERR6053715 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053715/ERR6053715.fastq.gz c23a572be7e3657e70dad51e616265c1 24030 -Kocher2021 2021 10.1126/science.abi5658 ZWE008 ENA PRJEB45699 ERS6597884 ZWE008.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3570 ERR6053716 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053716/ERR6053716.fastq.gz f3b0a5e471bd5bfb31f1f13ecf692a3c 161027 -KrauseKyora2018 2018 10.7554/eLife.36666 Karsdorf ENA PRJEB24921 ERS2200179 IL235-Kars_537_M.NA double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 386780892 ERR2299807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/007/ERR2299807/ERR2299807.fastq.gz e5627496b0d6a6f5d78a11fb20249f8c 12253917998 -KrauseKyora2018 2018 10.7554/eLife.36666 Sorsum ENA PRJEB24921 ERS2200180 KH170066.halfUDG.shotgun double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 367574767 ERR2299808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/008/ERR2299808/ERR2299808.fastq.gz 30fc629fe055fef51ea2f5f6eff29454 11735270987 -KrauseKyora2018 2018 10.7554/eLife.36666 Petersberg ENA PRJEB24921 ERS2200178 KH150005.halfUDG.NA double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 419413082 ERR2299806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/006/ERR2299806/ERR2299806.fastq.gz 23ffc9b98d5b57136929a67112079db7 14039216437 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 BEL024 SRA PRJNA721828 SRS9825982 BEL024-1-191126-ML4-I-PE-P7-NextSeq500_S4_L001_R1_001 double HGS Taq Diamond none unspecified PAIRED WGS 24222239 SRR15512724 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/024/SRR15512724/SRR15512724_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/024/SRR15512724/SRR15512724_2.fastq.gz dac13d11985f2cd7d59a687927218b4c;4b74540af3585980773297020d1c2e78 1045813443;1082441105 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826037 TU594LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 13024659 SRR15512595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512595/SRR15512595.fastq.gz 687d352b3a74ae3e557c0f2020d4be47 459188288 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826036 TU594bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 60428835 SRR15512596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512596/SRR15512596.fastq.gz 42136fd28a0ce0e232d876c7ea93920a 2070309008 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826036 TU594aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 58087240 SRR15512597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512597/SRR15512597.fastq.gz b6a957424e0e95aa8d10584182d05e19 1979729021 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826038 TU594_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 8516797 SRR15512594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512594/SRR15512594.fastq.gz 3317224bd1d6c199856651994b3ce510 295956644 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY023 SRA PRJNA721828 SRS9825983 CHRY023-1-191126-ML1-I-UDG-PE-P7-NextSeq500_S1_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15122665 SRR15512723 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/023/SRR15512723/SRR15512723_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/023/SRR15512723/SRR15512723_2.fastq.gz 036ffbd45195a4219b8e5952f5615958;7f3096785f73fc600c5f5c95b8b86ac0 520871996;545208145 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY023 SRA PRJNA721828 SRS9826045 CHRY023-1-200706-ML9-I-UDG-PE-P7-NS500_S10_L004_R2_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 11285398 SRR15512549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512549/SRR15512549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512549/SRR15512549_2.fastq.gz e2c2a877c6b39ec3a9daad559a604e0d;35dbae006dd092812244f67a03d9353a 441936123;463526923 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY044 SRA PRJNA721828 SRS9826047 CHRY044-1-200626-ML10-I-UDG-SE-P7-NS500_S8_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15625772 SRR15512532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512532/SRR15512532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512532/SRR15512532_2.fastq.gz 7c6c1d27aab36adf86e3ca5312c9743d;2fccae11b039ec65686a317b49692652 658191651;703282995 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190719.A-Lane_10_TU1084LeprosyCapture_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 43686576 SRR15512687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512687/SRR15512687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512687/SRR15512687_2.fastq.gz 3fae2596a9289a41a04b81e860e3319f;0cb5c787d74346ef90c815eca04400d3 1796671126;1907215670 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190314.A-Lane_9_TU1084LepCapturePortugal_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 113182 SRR15512688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512688/SRR15512688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512688/SRR15512688_2.fastq.gz 74f9c541279637f0d02f9cbca8d6dd3e;cb6858e052dab2e7b875dd24ce92c48d 3849086;4445967 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190314.A-Lane_9_TU1083LepCapturePortugal_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 200162 SRR15512690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512690/SRR15512690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512690/SRR15512690_2.fastq.gz f9b483544bd3b4540c408507841ab616;ccdabae82d001e72c30f3f7b4854fe19 6970576;8134258 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 27188837 SRR15512684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512684/SRR15512684_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512684/SRR15512684_2.fastq.gz b7d5a273fa8f15efe821200e420255d3;6be85fd60b56dccd5b23a492024d9d57 1166576320;1221496496 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 25568707 SRR15512685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512685/SRR15512685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512685/SRR15512685_2.fastq.gz 1f5fbaac3d43b0e509c5b3ddb6fa0244;080c9f6d66c7780fa8dda0560fdf43fb 1102451158;1153651846 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 27745734 SRR15512686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512686/SRR15512686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512686/SRR15512686_2.fastq.gz 2dcd1eaaccb5bd7b5889051ab7de3624;2b89aa2b37084208def66ae33f52dbe6 1186492498;1241136372 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 EDI006 SRA PRJNA721828 SRS9826051 EDI006.A0101.ML1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 16115791 SRR15512521 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/021/SRR15512521/SRR15512521_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/021/SRR15512521/SRR15512521_2.fastq.gz dcbd334f06a693d67d0b1d072ad2f973;9bb9411d49fbbe05ef91f3e558461932 596404715;689453503 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 JDS097 SRA PRJNA721828 SRS9826001 JDS097-1-200626-ML11-I-UDG-SE-P7-NS500_S9_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14530542 SRR15512689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512689/SRR15512689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512689/SRR15512689_2.fastq.gz 763f50ffaf28b6f7ad6b2066cd031d8d;cc647416a70bcb9c3e9801851fdf33fa 597249141;625816336 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU940_XXX001.A18330.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2477927 SRR15512522 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/022/SRR15512522/SRR15512522_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/022/SRR15512522/SRR15512522_2.fastq.gz 44370fcda113d5810cf4d28683fda2ce;a1f5b3f117d1e518a552d1ca6e31fa80 67763229;77423253 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU942_XXX001.A18332.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2976051 SRR15512693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/093/SRR15512693/SRR15512693_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/093/SRR15512693/SRR15512693_2.fastq.gz d26788e8213c9628624d2bf1e7951387;676cf91c0ab1fd7157a6eb12f3e2c030 80029548;91748548 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU941_XXX001.A18331.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2781548 SRR15512695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512695/SRR15512695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512695/SRR15512695_2.fastq.gz 80f375219ada608e277b3258ed70c4b2;69feebbb593e7c5e25d099dcec102bf6 73581030;84818958 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGa_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 4417786 SRR15512519 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/019/SRR15512519/SRR15512519_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/019/SRR15512519/SRR15512519_2.fastq.gz b5fcf572c059e5d780a54694af32e2ca;9c18228c69ba2f2fc9d0db672a80337e 136564924;145650939 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGc_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 31056166 SRR15512696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512696/SRR15512696_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512696/SRR15512696_2.fastq.gz 57ef269d4dbe538c10783f723123a9ee;67a87e8fe5080ba29916768c0cf20278 1190339420;1265288335 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGb_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 17176698 SRR15512697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512697/SRR15512697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512697/SRR15512697_2.fastq.gz 4ca9e240db39549ce00c005e20f5b1ba;c40ffb63304d09bb4f9751f500fc6df7 686449807;730674733 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU940ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2439503 SRR15512520 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/020/SRR15512520/SRR15512520_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/020/SRR15512520/SRR15512520_2.fastq.gz 1e18a55302c93b78f60d161aa2bc7727;8447c65616c1b803f667c43eb2caa5cc 67076466;72118907 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU942ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2828828 SRR15512692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512692/SRR15512692_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512692/SRR15512692_2.fastq.gz 17710d30cdb73642d6dc99078a0345aa;e6b4e3991c96b26c2ce5bbeee09e0a5b 75957372;82102756 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU941ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3121280 SRR15512694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512694/SRR15512694_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512694/SRR15512694_2.fastq.gz 347664586fe13a768710acdad903dc7f;ea45b04fe96bc193a3f6bda91d42ef18 82410349;89481413 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU527_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 3699509 SRR15512575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/075/SRR15512575/SRR15512575.fastq.gz 02bb7bb27d147582e9c60b1ff4a8f5a5 121420453 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU527LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 982734 SRR15512576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/076/SRR15512576/SRR15512576.fastq.gz d766299ea300e31272c52b6be911ba93 33230176 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 4150035 SRR15512578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/078/SRR15512578/SRR15512578.fastq.gz 40551fa48c91111e67dbfd79482d105b 132755863 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526LperosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 1302846 SRR15512579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/079/SRR15512579/SRR15512579.fastq.gz a1da3e4ac4e155672b04a83a9fc04a82 43628073 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526C double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 56772741 SRR15512580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/080/SRR15512580/SRR15512580.fastq.gz d61b466b82cb9400185da9ea915c0813 1850754467 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526B double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 23837107 SRR15512583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512583/SRR15512583.fastq.gz 2e3615133f18ca554c557b5703093cd7 748911660 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 6077219 SRR15512585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512585/SRR15512585.fastq.gz 67cc201d654855665ff1420665a73b4c 196363706 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 3307095 SRR15512586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512586/SRR15512586.fastq.gz 9ded477de6d5c98167305d3233d5bbd0 108102813 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 24607865 SRR15512587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512587/SRR15512587.fastq.gz ccad4c3ab5a450981b052b3a03da42d4 806425731 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 22780562 SRR15512588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512588/SRR15512588.fastq.gz bf0373fa4d75fecaa50bcf18c0e720cb 736944774 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 5286152 SRR15512589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512589/SRR15512589.fastq.gz 8bc829276b12395083775ac5f586184b 165371151 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 38171 SRR15512590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512590/SRR15512590.fastq.gz b4e9f951f4fdd21752facb388742e987 1051912 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 10705138 SRR15512591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/091/SRR15512591/SRR15512591.fastq.gz 90c01ba445aa069806734f10962aef22 336835013 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 7807646 SRR15512592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512592/SRR15512592.fastq.gz 5304139dd3a5228294508d34d581647d 244531474 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU527bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 16794139 SRR15512577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/077/SRR15512577/SRR15512577.fastq.gz c056ede4a4dc523f0c1260d4ec831214 561917540 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU526bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 9263024 SRR15512581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/081/SRR15512581/SRR15512581.fastq.gz 52d12b5da82f056c92a2acf31c1f03d9 301092713 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU526aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 8356398 SRR15512584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512584/SRR15512584.fastq.gz c19b4f69c54ffae27f92a2d7f7d35967 272507406 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11_S2_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12049622 SRR15512542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512542/SRR15512542_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512542/SRR15512542_2.fastq.gz f975d8eafa9617b7355abd9d1df37c76;fa36aa061eccae3071092212e9baf44c 518496860;492223847 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 2475311 SRR15512559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512559/SRR15512559.fastq.gz 5c3dbdf7eb9efdb600ca15c5287a7acf 85550047 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11Lep_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 2080239 SRR15512561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512561/SRR15512561.fastq.gz 7265da31167729e19f6be3ec449ed11c 72396666 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11B double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 83673115 SRR15512563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512563/SRR15512563.fastq.gz 0770e4ea9931587b9ad4e639878b8ba0 2485664202 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11_S0_L006_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 4702986 SRR15512565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/065/SRR15512565/SRR15512565.fastq.gz a52062264d2359c741a3e128449c47c7 191136313 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 23407885 SRR15512566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/066/SRR15512566/SRR15512566.fastq.gz 9806060e176988fbbd2f6cca4d79a044 695199556 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 12123292 SRR15512567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/067/SRR15512567/SRR15512567.fastq.gz 915df22b947efe399edf6a63cbe0238d 358801447 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 25276936 SRR15512568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/068/SRR15512568/SRR15512568.fastq.gz c3dc114a9f4c5a510468320205fe59e6 748383811 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 22865002 SRR15512569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/069/SRR15512569/SRR15512569.fastq.gz e12523018ab59e819cec874c1a4a9b72 680357158 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11lep_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 3227559 SRR15512682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/082/SRR15512682/SRR15512682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/082/SRR15512682/SRR15512682_2.fastq.gz 6724e793e58871e37d5ba1d929479108;95063f240ee6bb882d560770c285e2cb 151065238;174543984 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826044 TU11bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 9769364 SRR15512562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512562/SRR15512562.fastq.gz 2c6ada53f48812620ba91f4c1f592e6e 320634217 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826044 TU11aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 13080236 SRR15512564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512564/SRR15512564.fastq.gz 45baa6e43a94796eebc8d822117473b7 421646799 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826003 TU11_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6489853 SRR15512683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512683/SRR15512683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512683/SRR15512683_2.fastq.gz f8eaf27552b9de5747f0759f631961b3;0a42c377db46ba8e7cc1c2b4bf67c99c 253336865;267960712 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826023 20201023.A-ZH1119_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 16393711 SRR15512636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/036/SRR15512636/SRR15512636_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/036/SRR15512636/SRR15512636_2.fastq.gz 6a0e089903460e90e9ee9b958598eb5c;3035c62deae8671ef8320fe3677846c1 615273933;633143446 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826023 20201023.A-ZH1108_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 12324903 SRR15512637 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/037/SRR15512637/SRR15512637_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/037/SRR15512637/SRR15512637_2.fastq.gz 6e067f8f720d411c8bc07d0109b91711;14c6ab689871e41620486b292af5126c 468280884;494721120 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG3_S25_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6068 SRR15512638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/038/SRR15512638/SRR15512638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/038/SRR15512638/SRR15512638_2.fastq.gz c1eb0af933cc639e69a8b3a74c171de4;072a243289fd7b05385104c958aa01fc 289249;294722 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG2_S24_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 3869 SRR15512639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/039/SRR15512639/SRR15512639_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/039/SRR15512639/SRR15512639_2.fastq.gz 12f4f4b9aea059ce785dae0732a5a6e7;5cd65d8bb1b55147eb291e90b87d5bc5 181812;188551 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG1_S23_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 3306 SRR15512640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/040/SRR15512640/SRR15512640_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/040/SRR15512640/SRR15512640_2.fastq.gz f16c1bd6866ec3bb0530b0f1f1043d13;45938ecf9a16130285779852eae36ed2 150608;155468 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826014 20190516.A-Lane_17_TU1173_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3412962 SRR15512654 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/054/SRR15512654/SRR15512654_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/054/SRR15512654/SRR15512654_2.fastq.gz db579430e539302ad573bfef603e1723;d46bb266fe0a6e7c05810b783f3f5a7b 164806130;170372872 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826014 20190516.A-Lane_17_TU1172_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2800635 SRR15512659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512659/SRR15512659_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512659/SRR15512659_2.fastq.gz 50d7cff0b6f1770247d9f8975a1df3ba;032cbf01a1128cdc29109014fac740fe 136393267;140076170 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 24830 SRR15512655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/055/SRR15512655/SRR15512655_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/055/SRR15512655/SRR15512655_2.fastq.gz 50aad8f0195ed89b54e3463e8498cd2f;9e111d8ca2ddd639907a17093e0baf5c 1046004;1142912 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 12693866 SRR15512657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/057/SRR15512657/SRR15512657_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/057/SRR15512657/SRR15512657_2.fastq.gz 7a87dcaaa6db650047d8c926b7e903b8;cdcef1e4af73b0fcf12c9380052c89ae 551688346;567650222 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5019250 SRR15512658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/058/SRR15512658/SRR15512658_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/058/SRR15512658/SRR15512658_2.fastq.gz 097fa14c0c185a2db16e119c6779bc37;117d39390d2ce1a8bd64dded54060059 227286509;232649254 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826017 20190516.A-Lane_17_TU1171_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3728851 SRR15512651 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/051/SRR15512651/SRR15512651_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/051/SRR15512651/SRR15512651_2.fastq.gz 287c11046ec0fe42b749cdddd1a9ac7a;5b5a83c26c4f1b54a39644fa6c10d612 182427856;185739427 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826017 20190516.A-Lane_17_TU1170_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3055068 SRR15512652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/052/SRR15512652/SRR15512652_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/052/SRR15512652/SRR15512652_2.fastq.gz a8f206eaab4dc8d301284235cc5cde6b;02443f939485d2cfe67aba8ff4d81a3f 148497514;153620987 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6014995 SRR15512648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/048/SRR15512648/SRR15512648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/048/SRR15512648/SRR15512648_2.fastq.gz 4e72c724ebfa8642901804953cfec27d;0732b7ea2efced337d70c663e87568a7 248803198;255871706 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6138019 SRR15512649 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512649/SRR15512649_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512649/SRR15512649_2.fastq.gz b98fb83487efcee6543238369f369002;f74eae7f2d848d8c7bbaf120706fea95 278068824;280464918 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9853149 SRR15512650 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/050/SRR15512650/SRR15512650_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/050/SRR15512650/SRR15512650_2.fastq.gz 353a73679d6e131507049d2863cdf4d2;f44591811b9370b76b820b1061c8839d 418003976;431013594 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826019 20190516.A-Lane_17_TU1167_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3274860 SRR15512642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512642/SRR15512642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512642/SRR15512642_2.fastq.gz 4211f104f6e5e5b6a0d19920d13951a6;96aeebbea1e9c294a0daede95c5b2c6f 155984268;160737638 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826019 20190516.A-Lane_17_TU1166_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2841263 SRR15512647 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/047/SRR15512647/SRR15512647_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/047/SRR15512647/SRR15512647_2.fastq.gz 3e75ec96e879255c1c588eac0370eb16;2cec4aa0e47755f1b30c48656b298787 136229055;142791271 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14836030 SRR15512643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/043/SRR15512643/SRR15512643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/043/SRR15512643/SRR15512643_2.fastq.gz 384cec68ecabcb1fce7c397027a24219;be3f6b0be8d05e4e24c6012856dc886e 618234836;651882251 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 4090725 SRR15512644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/044/SRR15512644/SRR15512644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/044/SRR15512644/SRR15512644_2.fastq.gz 9dd59de030247bd6c28a045207c5e643;0c6512069874039843415e3a6a83924e 162525493;172435257 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9178172 SRR15512646 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/046/SRR15512646/SRR15512646_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/046/SRR15512646/SRR15512646_2.fastq.gz e71d0fbb401ec37a274993aed8a811f1;d2b766a022ce30f28bf0ff6063a58545 369282315;394715445 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825989 20201023.A-ZH1114_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6722946 SRR15512713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512713/SRR15512713_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512713/SRR15512713_2.fastq.gz a1ee9083fe79c66b2d089085e81adbf7;875e92246047ea50e86fc88476628ef1 252642664;260471407 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825989 20201023.A-ZH1113_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 10291264 SRR15512714 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512714/SRR15512714_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512714/SRR15512714_2.fastq.gz bb605db02eef03b6f0133811efe4939d;3b8d1b4dc48433913db60ff81741d715 381760710;394756043 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG3_S22_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 2036 SRR15512715 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/015/SRR15512715/SRR15512715_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/015/SRR15512715/SRR15512715_2.fastq.gz 7154860ba05cee957d425b5f5b82c5e4;85816b2493895057725e04e38f20adfa 98856;100158 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG2_S21_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 2271 SRR15512716 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512716/SRR15512716_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512716/SRR15512716_2.fastq.gz 1504873a70186f0a789907c77e87e29a;0137b2c4edb9f55e7a3badc98cd271af 109384;112056 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG1_S20_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 1580 SRR15512717 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512717/SRR15512717_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512717/SRR15512717_2.fastq.gz 073a5b5ade4e0584924c2ca471481138;4ba57f8b7366bd00a4fb2e369b558724 77536;79027 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825992 20190516.A-Lane_17_TU1158_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3303744 SRR15512701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/001/SRR15512701/SRR15512701_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/001/SRR15512701/SRR15512701_2.fastq.gz 01be822609002d240030a9e518d6e45b;2ee04acf1e4c2621bd29f1bd5ef7ccdc 163374036;166126749 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825992 20190516.A-Lane_17_TU1157_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3698387 SRR15512705 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/005/SRR15512705/SRR15512705_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/005/SRR15512705/SRR15512705_2.fastq.gz 5955c9fcc876270c0b68a4d2d087ca42;a1129046274a67f16caa9e11004d240a 173898353;178217777 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 8450039 SRR15512702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/002/SRR15512702/SRR15512702_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/002/SRR15512702/SRR15512702_2.fastq.gz 758e20c364251263ab9a38e367dd7bb8;37d83e175cee4586c9ecc373f94ff61b 358789954;369429069 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9994861 SRR15512703 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/003/SRR15512703/SRR15512703_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/003/SRR15512703/SRR15512703_2.fastq.gz 3abd0ef2852c53112405e3526c0dd99f;4c615e3fe5b0711a5b3e362ccfe4594f 413914579;429685661 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6562846 SRR15512704 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/004/SRR15512704/SRR15512704_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/004/SRR15512704/SRR15512704_2.fastq.gz 3a7aca5732ffdda90b5adda3588a0026;7bedcdc4b2ede43f793a865b28ef9ad0 275965657;281553783 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826012 20190516.A-Lane_17_TU1169_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2153032 SRR15512660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/060/SRR15512660/SRR15512660_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/060/SRR15512660/SRR15512660_2.fastq.gz 882ac257670306f89b9324cae868c595;6d663beeec1edb649df14cca4ed1d266 102944265;107735506 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826012 20190516.A-Lane_17_TU1168_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 1881317 SRR15512664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512664/SRR15512664_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512664/SRR15512664_2.fastq.gz 317dd8af565ac0ea16bf3cd6ce26e8a0;264c2747aabbf75c42226dc2f1868935 90078305;97157931 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 13067069 SRR15512661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512661/SRR15512661_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512661/SRR15512661_2.fastq.gz 6bbd796407ed11830097cff4db60697e;f4feafdfa37f776f4a4546bd44df6e31 549962434;566733896 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5655426 SRR15512662 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512662/SRR15512662_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512662/SRR15512662_2.fastq.gz b188166e06d4b59c5d47401d5d9e887f;291cad3d396acfe69c1a06f3d8b3a4d1 235706205;241710276 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5931825 SRR15512663 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512663/SRR15512663_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512663/SRR15512663_2.fastq.gz c029883a0cfe5269317ed2179f12052a;0437e04238ba1a2f68d45795b9092bc6 236298937;245547031 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9826024 20201023.A-ZH1112_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 4247976 SRR15512627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/027/SRR15512627/SRR15512627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/027/SRR15512627/SRR15512627_2.fastq.gz c06f7db9bd573fdc15aa982f4ce01c14;ed102e217f0f3f9518d1cf0dd3262fc1 153587338;160800656 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9826024 20201023.A-ZH1111_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 11454793 SRR15512628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/028/SRR15512628/SRR15512628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/028/SRR15512628/SRR15512628_2.fastq.gz 02fa139f8578e1e4f112a2ede55efd3b;9b1e586bb75b1bc40c0bd9db048242d4 419077575;429445937 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1112_UDG2_TTACTTCT_CCTCGATA_S3_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 20775643 SRR15512629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/029/SRR15512629/SRR15512629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/029/SRR15512629/SRR15512629_2.fastq.gz e906c46ed3337c3b90b3992e12831a94;a87520ce136b87389faf8807f7d7a00c 781391061;814614681 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1112_UDG2_S21_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 293036 SRR15512630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/030/SRR15512630/SRR15512630_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/030/SRR15512630/SRR15512630_2.fastq.gz caead9938ca81cfc8a32947cffeaee6f;a210d1510faa249ad3287f8f5f1f9ffd 11563389;12159549 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1112_UDG1_TTGGCAGA_AACCAACG_S4_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 18280330 SRR15512631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/031/SRR15512631/SRR15512631_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/031/SRR15512631/SRR15512631_2.fastq.gz 0500446a7d72cbe3fceeeafa93a2edbd;98f0ba9f50b9f5de04cad0979c44f669 695852501;754810450 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1112_UDG1_S20_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 266369 SRR15512632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512632/SRR15512632_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512632/SRR15512632_2.fastq.gz 25b68ca5123c307f92c31f246cb56537;0cd7b6057f9673b254d7403990b12f9c 10614592;11643853 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1111_UDG2_TGGTCCTG_CGAGAGTT_S2_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 24111899 SRR15512633 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/033/SRR15512633/SRR15512633_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/033/SRR15512633/SRR15512633_2.fastq.gz da48c20d9e748fa1030f354c5f6257cd;2385e96be9129d0e8e245dd4f59f2188 953909643;984799760 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1111_UDG2_S19_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 338632 SRR15512634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/034/SRR15512634/SRR15512634_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/034/SRR15512634/SRR15512634_2.fastq.gz 0885f5240449afa825de343bd191a3b3;7036774a9154a1340060149e931f07b5 13904591;14489598 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1111_UDG1_TGGTAATT_TGGTAGTC_S1_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 25135710 SRR15512698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/098/SRR15512698/SRR15512698_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/098/SRR15512698/SRR15512698_2.fastq.gz 004b1a012880bfbc6d85d3bf8503afcb;fc62c31ec5d583ece13b9e0497eed782 967857613;1006452562 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1111_UDG1_S18_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 354734 SRR15512699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/099/SRR15512699/SRR15512699_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/099/SRR15512699/SRR15512699_2.fastq.gz 770ded5a982b1b9f0a23dfde6df277b1;810298bdd4db630d0a8a67e8aa54be67 14212447;14922107 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826029 20190516.A-Lane_17_TU1160_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2556961 SRR15512612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/012/SRR15512612/SRR15512612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/012/SRR15512612/SRR15512612_2.fastq.gz f90724086cecc915586f226009918b68;1335065af0becb69fd304934e6cca14a 121369790;125650969 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826029 20190516.A-Lane_17_TU1159_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2270716 SRR15512617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512617/SRR15512617_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512617/SRR15512617_2.fastq.gz 202b20a5e272285dd5fa82044a988613;d93fd9ea22c7d6a1aaa94d3822121339 109438676;113039908 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 10498778 SRR15512609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/009/SRR15512609/SRR15512609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/009/SRR15512609/SRR15512609_2.fastq.gz 725dea7227d8b571a58b6ce73fcef191;a527b7af25e5b409450f108ad8a309f5 475416046;493399613 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9112084 SRR15512610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/010/SRR15512610/SRR15512610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/010/SRR15512610/SRR15512610_2.fastq.gz 52916bbdd16aa17fcfc41d7de30f2f3c;6bb666764eea6d4a3ffc0833e9f5ab47 388859655;406423184 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 18127984 SRR15512611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/011/SRR15512611/SRR15512611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/011/SRR15512611/SRR15512611_2.fastq.gz 5f807944b9781f80960612d1aa10100a;acf85d157c9c19b85456938c84108543 814415698;849046249 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 16522459 SRR15512613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512613/SRR15512613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512613/SRR15512613_2.fastq.gz dc4cf59f753cc050486e35afb76ea15b;1d14ba0d322f9179739707edad2765eb 736891563;767539808 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14188709 SRR15512614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512614/SRR15512614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512614/SRR15512614_2.fastq.gz 7db265def38bb2b35bab0403ea6294ad;e406e13c994dc1903d399ae4ba9183fd 641798617;687185776 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15369171 SRR15512616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512616/SRR15512616_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512616/SRR15512616_2.fastq.gz 5667c84e73631d5654900c888d3daf10;a6f8b88c7edebc36d5b073ca138f448e 684584767;735771282 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 28876018 ERR8958741 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958741/ERR8958741_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958741/ERR8958741_2.fastq.gz fb6b01c64a79ff4f6bc4a6da2d8bbf37;91589691b93ca920595f4997941472d6 492904219;519409908 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20054538 ERR8958742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958742/ERR8958742_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958742/ERR8958742_2.fastq.gz 83794e3d585cecadf221eb7da0da54f2;f8f7067f6526d6b174bf17ca4a030ecf 357395694;380626259 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24713886 ERR8958743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958743/ERR8958743_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958743/ERR8958743_2.fastq.gz 5d7b5424d6dd3d47f53b0e86fa7720a8;45a563d5c023a8eaa696afe820231df9 412963924;433351173 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 36550342 ERR8958744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958744/ERR8958744_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958744/ERR8958744_2.fastq.gz 320eaf2711d7ea39968cedf16b32d436;9ccf43923bff77e15db2599f5f1ab506 576503895;605303015 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0104 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 15253454 ERR8958745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958745/ERR8958745_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958745/ERR8958745_2.fastq.gz 36178eb417a6de3790b8a0a0e5dbec1b;32919cfd708d0567114daf77d73be52d 248237096;258470309 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 29442670 ERR8958746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958746/ERR8958746_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958746/ERR8958746_2.fastq.gz 6a5238a929d7d5f0d61e149a052f32a6;5cc30efb7b1ac5c8dd291ee8abdc800f 499848154;510867830 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0103 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22716298 ERR8958747 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958747/ERR8958747_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958747/ERR8958747_2.fastq.gz 949cd0959100790612e0bfd8614777d1;ac5c08e7948ece79ae9aeb301e3aed9d 343090912;353549427 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0104 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 19784314 ERR8958748 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958748/ERR8958748_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958748/ERR8958748_2.fastq.gz 4ea625c8dfd14c4c714b4593cbb72ae1;4c5e0c1537f3afaf48accdabeb3b2e17 321844977;333645015 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 GRS004 ENA PRJEB51099 ERS10777166 GRS004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20634126 ERR8958749 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958749/ERR8958749_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958749/ERR8958749_2.fastq.gz 5169684d19059bb40dca683d60f286ee;d453b508eedce749b873985b32345c36 335329463;341266169 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23517728 ERR8958750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958750/ERR8958750_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958750/ERR8958750_2.fastq.gz e1bb80a3c1d1bef3d576a499709e368e;0b366c8acad5a101093a45fea4ffb980 372333212;380513957 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7415860 ERR8958751 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958751/ERR8958751_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958751/ERR8958751_2.fastq.gz f9c1b4762e18acd2cb2ecb7f3714d75d;69a1eee974c2581058cea96c3cab4f0a 132671262;133218681 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6865106 ERR8958752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958752/ERR8958752_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958752/ERR8958752_2.fastq.gz ab6e38eb5661177bc8a214a9f81404a8;64700c9d12b1941d566573ab9db256eb 122173681;122880444 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7466930 ERR8958753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958753/ERR8958753_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958753/ERR8958753_2.fastq.gz fe8054a4ed40a36ce16346edd8761d04;7f6ac7c892cae3035f38d65b1bdc19a4 132767458;134776372 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7283934 ERR8958754 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958754/ERR8958754_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958754/ERR8958754_2.fastq.gz 9df513ec93961c4a76eca0e1a0026d96;4ab75ea3071ec49d3ac0200524107f54 129976884;132293549 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7310936 ERR8958755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958755/ERR8958755_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958755/ERR8958755_2.fastq.gz b6d8be62b8cce6660e457c1b107bdb13;527c405657b8068aa21836094f08b90a 127164933;133475599 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 26111934 ERR8958756 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958756/ERR8958756_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958756/ERR8958756_2.fastq.gz 6b7a4444f006cc8094a513cffc57d2a2;fc7e0931260978d89b54c6703d34d3b2 437564462;455298409 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7367942 ERR8958757 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958757/ERR8958757_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958757/ERR8958757_2.fastq.gz ea69ddabaa2d40a93dfd16e157a83d3d;8a2470adb920d9fb74b4cdffb7eb41ee 139893787;141546069 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6844112 ERR8958758 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958758/ERR8958758_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958758/ERR8958758_2.fastq.gz 40299e10a8e2b3ecc139c88f2e59ae6e;f70555fa0dea932921108392b1190fd1 129427920;131025297 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7451900 ERR8958759 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958759/ERR8958759_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958759/ERR8958759_2.fastq.gz 83d251d34be0e77fded560756479952f;5c4b3c75880b5b8f612940c63b5f1505 140839203;144089413 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7220638 ERR8958760 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958760/ERR8958760_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958760/ERR8958760_2.fastq.gz 841422777bafa2f2363b6138eda6ab16;89fe5606418128ccf96b5d22145777d9 137047724;140443758 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20080206 ERR8958761 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958761/ERR8958761_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958761/ERR8958761_2.fastq.gz 84f6ba8593a148ad7cdbcea92b06900c;043e37196eb5f6d0dce4975f751e7a73 384534868;408953448 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 28242528 ERR8958762 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958762/ERR8958762_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958762/ERR8958762_2.fastq.gz 29fc1357a5bbc23a21b859d39224f9fe;891c818b347d39b4e7ca83b2377e32c9 460969895;484144809 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 25216996 ERR8958763 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958763/ERR8958763_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958763/ERR8958763_2.fastq.gz fc35b4906103201bc3ea2f495287fd1b;4aa197a36fc950282b6a7bb9222095d3 439074246;465132587 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 18646814 ERR8958764 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958764/ERR8958764_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958764/ERR8958764_2.fastq.gz b5d2463bdb64f9d4cf66fd71908246fb;a4086e61df24ed249ec0b1d72e538e14 318205005;327114018 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24483462 ERR8958765 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958765/ERR8958765_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958765/ERR8958765_2.fastq.gz 1d5a2d8cebfb3968b469b2f9ee097581;baf27af8a054bd0afdba249e426f7ac1 470865727;497288903 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31782690 ERR8958766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958766/ERR8958766_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958766/ERR8958766_2.fastq.gz 9c9e7e78bbc59a4978fe1eaeadde4f20;ba1bd94ae1d98c1313f8824c3624717e 495945594;541498970 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 25429992 ERR8958767 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958767/ERR8958767_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958767/ERR8958767_2.fastq.gz aafc69fb496bff9e59a09208192d39f3;149353a520639dfe8fc5212bfc6d676d 452111445;477368950 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KZL002 ENA PRJEB51099 ERS10777179 KZL002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24350346 ERR8958768 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958768/ERR8958768_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958768/ERR8958768_2.fastq.gz cfd8f456f5c6e34eef219a80a8036512;8dca4a07fa36889b3ddafa5db6ed589a 404950248;418469399 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KZL002 ENA PRJEB51099 ERS10777179 KZL002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23416470 ERR8958769 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958769/ERR8958769_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958769/ERR8958769_2.fastq.gz 52f09d049aa5671c6a8171da3b21eed0;7fb7a7206271460e78c6519d9ba84364 389635284;398734827 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777172 MIB054.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22816694 ERR8958770 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958770/ERR8958770_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958770/ERR8958770_2.fastq.gz f4f082d5701342b6f773a0c178a386ff;e42bf738e95a442ae0dfab776dad9274 412099780;441082812 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 21089426 ERR8958771 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958771/ERR8958771_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958771/ERR8958771_2.fastq.gz 15c46d0e4fb081c9ae01720368701cfe;9882e9f7ae9954329bc5cc0f8ade8c48 399580379;415472643 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 27820024 ERR8958772 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958772/ERR8958772_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958772/ERR8958772_2.fastq.gz b014a7c083dddb8d7878ad215a4dfcef;be57f47d395290ddf3c6726e882841f0 509836910;536949682 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18956_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7201144 ERR8958773 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958773/ERR8958773_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958773/ERR8958773_2.fastq.gz 052f62c5e1c9d45d7abfe828681e26ef;a38b3b7ea76c0a0fc86aa818ee2e6e70 113767950;117338242 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18957_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7163666 ERR8958774 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958774/ERR8958774_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958774/ERR8958774_2.fastq.gz b27ee9a8c04c8527bb6387149dd94125;ee51d33d44e1213feede217887481808 114232043;119178345 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18958_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4951700 ERR8958775 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958775/ERR8958775_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958775/ERR8958775_2.fastq.gz 3581f1857a8d8fe2f812b7dd9ba8f5ab;31ca2289506419a767ed2c47be278aeb 78836668;82274230 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18959_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4864020 ERR8958776 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958776/ERR8958776_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958776/ERR8958776_2.fastq.gz e883d2fe3fa252d05ce2841c99d18b2d;6a2f7ebd3f6034c12089388e8a5c41e7 77187807;81008583 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18960_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9816730 ERR8958777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958777/ERR8958777_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958777/ERR8958777_2.fastq.gz f1e3da952bf066a6bc82754cbe3facc7;d442ca438eebc39849fdfd926915a84d 154697855;162248108 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18961_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5838156 ERR8958778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958778/ERR8958778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958778/ERR8958778_2.fastq.gz fef1e9ae38530e3737748d20ca6f762b;8bcee84738a2f6f312184e8e97fc1b66 92912342;98450778 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18962_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7397302 ERR8958779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958779/ERR8958779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958779/ERR8958779_2.fastq.gz bedcf98eb820b87420c91b31cb78cf66;974d8efd7bc3c09b9d42f30aa12ec2d3 116325572;121916225 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18963_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6653730 ERR8958780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958780/ERR8958780_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958780/ERR8958780_2.fastq.gz 7c4be487f778352503bc54c111f9edb2;19f6ba5a3f45eb993a449f18e2b2fef1 104687020;107176760 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18964_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7743068 ERR8958781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958781/ERR8958781_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958781/ERR8958781_2.fastq.gz 51bf94581298d54e35f3c686121e8a77;394863b554f471aaab63dd62214606fd 121916100;126465610 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18965_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6086152 ERR8958782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958782/ERR8958782_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958782/ERR8958782_2.fastq.gz dd0cb6ec6aaa72378728f18f503d1d21;9cf50394f638dec6098273975fa0e713 96277711;99527190 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18966_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3721770 ERR8958783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958783/ERR8958783_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958783/ERR8958783_2.fastq.gz ce21188868a2628c3afa8c868f36f6bb;c76e2ae2441c601ea934cc1f1031dd09 59180472;62176580 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18967_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5294376 ERR8958784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958784/ERR8958784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958784/ERR8958784_2.fastq.gz fc025d307047caf0cd583d6a68f56267;1001f86d0ac15865d45ebfcffb4decd0 82815236;85954911 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18968_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6034900 ERR8958785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958785/ERR8958785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958785/ERR8958785_2.fastq.gz a51d170da88c95c0b1c9da4129791220;eba56bb98b6f16b2a26cce64bdff56f5 95111775;99928027 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18969_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7682146 ERR8958786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958786/ERR8958786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958786/ERR8958786_2.fastq.gz 37f2373ae042bc1dc50c77d17b690407;a14ae32bc1b06474133d9be20c6131d1 120187125;126308998 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18972_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13061698 ERR8958787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958787/ERR8958787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958787/ERR8958787_2.fastq.gz 10afa6ad9d1c91560d480c513758d3d8;03919c58c3d422bba2046eeedcb44a82 211715948;222503135 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6122276 ERR8958788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958788/ERR8958788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958788/ERR8958788_2.fastq.gz af6eb45e7278629c9f8c4d23974bdfa3;2a75ac5d86673a6f54d3947aaab6f11d 121767014;140972419 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5302840 ERR8958789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958789/ERR8958789_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958789/ERR8958789_2.fastq.gz c21a5ab337cc41f9c82a22134d3733cb;c7681a5e0637d644477fc093819e9382 104307330;122245357 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6399566 ERR8958790 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958790/ERR8958790_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958790/ERR8958790_2.fastq.gz f2a8e2f962fc099d0a4b63b68900ce60;b349d93c6751ba545dacf4183814a5e8 126793610;147498807 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5687250 ERR8958791 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958791/ERR8958791_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958791/ERR8958791_2.fastq.gz 0afdaa77ad5b17447ba1e752058b45b8;2aa4d4795d8555c214d81b368bc3ee7c 112533015;131914486 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6703710 ERR8958792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958792/ERR8958792_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958792/ERR8958792_2.fastq.gz 432cf2cfbf9cd27f8bc5233ff819ebba;cb51bde572c43fa5dca3ac167c0f831f 126103951;144411919 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5752622 ERR8958793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958793/ERR8958793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958793/ERR8958793_2.fastq.gz 28bdcc2709f0c08a775a6b0c6a84783d;ecd633180180b7a73360b2ac385f9aed 107217075;124231241 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7013530 ERR8958794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958794/ERR8958794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958794/ERR8958794_2.fastq.gz 49cb2ff8662feb99f97e3c6401d8cb2d;82a6b3709d8e3883ddc311fb458db4c2 131152659;150941251 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6173532 ERR8958795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958795/ERR8958795_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958795/ERR8958795_2.fastq.gz 849041022ba8d91924eba6d66a5dc293;3776b2ed87921c423eb36c6014856fab 115417775;133927301 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5854114 ERR8958796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958796/ERR8958796_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958796/ERR8958796_2.fastq.gz 458d8d51940ab364e88a50ea5aaf37ab;80995c424e0e3f14c0d5df792593b0fe 113239629;129990393 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4980244 ERR8958797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958797/ERR8958797_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958797/ERR8958797_2.fastq.gz b1ba3eeb80779570f4188bb5fc69857c;e53b683b28294bc3dd9f59a12a8cd70f 95308580;110829407 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6119716 ERR8958798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958798/ERR8958798_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958798/ERR8958798_2.fastq.gz aa91db5df39c6b2b92389abe374b0274;7223bef5972de00f4d6089ff40d32517 117622361;135747217 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5334900 ERR8958799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958799/ERR8958799_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958799/ERR8958799_2.fastq.gz 61c039d5b75a88adc5432202f0f344d1;abaf8ef8692aa2285daa8007d6413e41 102567093;119274008 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLE031 ENA PRJEB51099 ERS10777171 KLE031.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 7052786 ERR8958800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958800/ERR8958800.fastq.gz 41f09009eeaf716e9b0b16a6da639a5d 267898743 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLE048 ENA PRJEB51099 ERS10777175 KLE048.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 9937768 ERR8958801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958801/ERR8958801.fastq.gz 81974d6b0077654cae414d7a34a8289f 369483736 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 21060311 ERR8958802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958802/ERR8958802.fastq.gz 0e2eab00b0164f156c0a022ed34e108b 726962619 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 OOH003 ENA PRJEB51099 ERS10777176 OOH003.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 2859519 ERR8958803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958803/ERR8958803.fastq.gz 5b3e3b1b330706b2e6f0b1f8216c3d41 100819346 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 OOH003 ENA PRJEB51099 ERS10777176 OOH003.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 19349232 ERR8958804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958804/ERR8958804.fastq.gz a8a8599c37a2b7786d0fe7d15b280b31 625131667 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 GRH001 ENA PRJEB51099 ERS10777181 GRH001.A0202 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 13928892 ERR8958805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958805/ERR8958805.fastq.gz f57f7160a11d3bab4faadf6ce7d07059 490241008 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 VEL003 ENA PRJEB51099 ERS10777180 VEL003.B0101 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 12441905 ERR8958806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958806/ERR8958806.fastq.gz 371c79ddff5baa91a5cb7766d167f23a 359596973 -Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 SVK01_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 810269 SRR10010568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/068/SRR10010568/SRR10010568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/068/SRR10010568/SRR10010568_2.fastq.gz b77c65c2dc07f61661d7300ef1d5b025;981c381065af0ec4c9d1529f43428152 30813644;32693295 -Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 SVK01_2017-08ss single KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 4256252 SRR10010569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/069/SRR10010569/SRR10010569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/069/SRR10010569/SRR10010569_2.fastq.gz 2aafc58f7b355c6f04ae3669b0414c2b;7d95048832dd4c180d4bac83fc9a1de0 216792814;245578698 -Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1027699 SRR10010570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/070/SRR10010570/SRR10010570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/070/SRR10010570/SRR10010570_2.fastq.gz c8de1e0f007eb5d798f7de7d39ddfef5;316112d5b8a69768a011f9f588287b5b 52061368;54802649 -Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 36039199 SRR10010571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/071/SRR10010571/SRR10010571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/071/SRR10010571/SRR10010571_2.fastq.gz 323525ced3bfcc0fd15d61e9f9785f25;7558d827486a97dc355d69f87bb228a7 1609120451;1753741001 -Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 3754544 SRR10010572 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/072/SRR10010572/SRR10010572_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/072/SRR10010572/SRR10010572_2.fastq.gz 66a611a73235587c4dd966ea448ccf3d;c54419ae0bc9836834e14fa49859db91 203901221;218508247 -Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 SVK02_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 721496 SRR10010573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/073/SRR10010573/SRR10010573_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/073/SRR10010573/SRR10010573_2.fastq.gz 6a8a080279e22e5d1e608a42bec0fdd4;9e51094e1a844273dea90d9a81c750cf 27699227;29934574 -Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1037689 SRR10010574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/074/SRR10010574/SRR10010574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/074/SRR10010574/SRR10010574_2.fastq.gz a14e39b1306c76cf0e853f45614f4bc8;492ed6ec10f1c884768f036ef458f4e7 52286282;51869063 -Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 60932077 SRR10010575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/075/SRR10010575/SRR10010575_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/075/SRR10010575/SRR10010575_2.fastq.gz 41481e2181bed17a1f6162088e73039e;b736b720dba1676df12cf2189cb5b7a6 2703887417;2767173269 -Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 1591335 SRR10010576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/076/SRR10010576/SRR10010576_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/076/SRR10010576/SRR10010576_2.fastq.gz 3d65ac1bd94f08b63b510a75cbe4fd8b;8227754107c914b85d5e0228099cad86 86436366;88520653 -Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 SVK05_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 450392 SRR10010577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/077/SRR10010577/SRR10010577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/077/SRR10010577/SRR10010577_2.fastq.gz 6c67f1c9141a1fe3a37942ef79f44caa;a10717ee3e574c36f76ae203c80ed6b3 16647817;16987734 -Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 25679913 SRR10010578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/078/SRR10010578/SRR10010578_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/078/SRR10010578/SRR10010578_2.fastq.gz 0aef885a64d57b609c8998015846cbaa;3d1e0aa7817d566b9b449f40da6a6ed1 1127153201;1332208906 -Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 1664765 SRR10010579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/079/SRR10010579/SRR10010579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/079/SRR10010579/SRR10010579_2.fastq.gz ea4c12c22667d6c62ad18a6407137fe7;240b09e087aff94c6b4a0367d239bed8 90177817;97639654 -Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 SVK12_2017-07 single KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2843753 SRR10010580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/080/SRR10010580/SRR10010580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/080/SRR10010580/SRR10010580_2.fastq.gz 362edbffa824ccb1d77a5f55ed524314;f44c86bc993db56db4295553f9a867f4 114431250;148091561 -Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 DVK12_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 682612 SRR10010581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/081/SRR10010581/SRR10010581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/081/SRR10010581/SRR10010581_2.fastq.gz 6174fee350c45ac4a0a7318e19227d2d;56b3a3c50d01284dd73d2173eda51205 33963837;35581491 -Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 DVK05_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 812001 SRR10010582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/082/SRR10010582/SRR10010582_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/082/SRR10010582/SRR10010582_2.fastq.gz ad9c4931b5cdba3cb041b4cb3c6718c8;12edf561bc794d149ff350e2eb748e0b 41018374;43169343 -Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 DVK05_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 2808729 SRR10010583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/083/SRR10010583/SRR10010583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/083/SRR10010583/SRR10010583_2.fastq.gz 1d13745c7262c970798a93b3066d8bb8;0aed21dffdd5717529551e5e57a3154d 152181514;163658839 -Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 SVK08_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 1341471 SRR10010584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/084/SRR10010584/SRR10010584_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/084/SRR10010584/SRR10010584_2.fastq.gz d55052c8ae6a2e219596ed216f1d81f3;b41d36f87c8233eb5095f0df03747087 47807296;46331297 -Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 614274 SRR10010585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/085/SRR10010585/SRR10010585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/085/SRR10010585/SRR10010585_2.fastq.gz 8fbcdec363b781374defd10fba65bf0f;f5ae7359f7d4741b57ba4e47fb1a34ea 30656133;34004397 -Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 DVK12_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2912644 SRR10010586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/086/SRR10010586/SRR10010586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/086/SRR10010586/SRR10010586_2.fastq.gz abbc9e2294d5a307e4916b4b4ada3e68;e2fbedcc7f4ed926c0f334fb97a05ef0 157768389;167668299 -Jager2022 2022 10.1016/j.tube.2022.102181 body_210 SRA PRJNA795622 SRS11554883 body210_A double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq X PAIRED WGS 58414020 SRR17499019 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/019/SRR17499019/SRR17499019_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/019/SRR17499019/SRR17499019_2.fastq.gz 64c07f9194159d6ac459cb1d89e3032d;3dc6ad3a84132fff1013c008cc52da31 3941440515;3753166391 -Jager2022 2022 10.1016/j.tube.2022.102181 body_210 SRA PRJNA795622 SRS11554883 body210_B double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq X PAIRED WGS 9768947 SRR17499018 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/018/SRR17499018/SRR17499018_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/018/SRR17499018/SRR17499018_2.fastq.gz 5f9ad49d7787d1857b096dc6a27e1380;2a66ad5a28fe0f553c6a4b8e865e0e6e 654630901;627204826 -Rieux2021 2021 10.1038/s41598-021-00518-w P04808771 SRA PRJNA698751 SRS8172159 AJHA16 unknown Unknown unknown unspecified SINGLE RNA-Seq 8687869 SRR13608699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR136/099/SRR13608699/SRR13608699.fastq.gz 71b71d16ea63a7465443240ef8063681 113111989 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 I.I2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 104886594 ERR7303550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/000/ERR7303550/ERR7303550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/000/ERR7303550/ERR7303550_2.fastq.gz 825326983e3c8f59731cc24a8c338847;17df877516351b9949b5786e10bde0ad 2806151164;2822885868 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 IC7 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 80319730 ERR7303553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/003/ERR7303553/ERR7303553_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/003/ERR7303553/ERR7303553_2.fastq.gz d692a4a0865cb8753c961f470d3b768d;e9e532bdb6c91f1ca632ef384bdc967f 1947121851;2016325596 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555208 IC11 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 108001856 ERR7303554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/004/ERR7303554/ERR7303554_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/004/ERR7303554/ERR7303554_2.fastq.gz e22ae8b6fbe97d84677bd15901e7eed9;4c0722ace2d73929ddec206f0c54aa2d 2625476006;2710005884 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 IC14 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 125205674 ERR7303555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/005/ERR7303555/ERR7303555_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/005/ERR7303555/ERR7303555_2.fastq.gz 6043bcd867835ab8f264104f8ab4d0b6;70fb96fefa144369fec5bd41045f66b4 3823351835;3889742972 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555209 IC15 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 110736790 ERR7303556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/006/ERR7303556/ERR7303556_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/006/ERR7303556/ERR7303556_2.fastq.gz 438160c23fb013915449f9295a386fd3;0adf0b461270b0d16f949fc3c522828f 3312064669;3419344141 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555210 IC18 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 74352738 ERR7303557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/007/ERR7303557/ERR7303557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/007/ERR7303557/ERR7303557_2.fastq.gz 0a66b0fb351cf971b6e44b65cd0ee7ae;de4d7e424826a8c3ce7d355369c3596a 1854685213;1867870076 -Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555211 IC19 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 61092786 ERR7303558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/008/ERR7303558/ERR7303558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/008/ERR7303558/ERR7303558_2.fastq.gz a0cc71c164aadb32e2478c38aaa0f7b2;ee6a4ff2438cd828298c4b827141f920 1506603737;1527311630 -Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG1 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 19151842 ERR7448187 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/007/ERR7448187/ERR7448187.fastq.gz 38211a1b9c8378fc1e449681173e1277 629828075 -Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG2 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 300624029 ERR7448188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/008/ERR7448188/ERR7448188.fastq.gz 683dfb8ea855b24e127bccdfc5842bb2 10121409009 -Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG1 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 12690759 ERR7448189 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/009/ERR7448189/ERR7448189.fastq.gz 24e7b4645ff0033c06c051eb190627d0 428644711 -Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG2 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 248662536 ERR7448190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/000/ERR7448190/ERR7448190.fastq.gz 1fd0403795e103c62aa64773ea20db72 8793649985 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 16951828 ERR9355392 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/002/ERR9355392/ERR9355392_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/002/ERR9355392/ERR9355392_2.fastq.gz 658ec67e123afc7f7c6224b86843fec7;139ac382a6f07fd97ab6441217f8ad18 313096554;339559582 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17584650 ERR9355393 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/003/ERR9355393/ERR9355393_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/003/ERR9355393/ERR9355393_2.fastq.gz 98fbc87d060ef4a399babe1b9055c197;a7301b2cb283365877e2831761a94f49 326264586;356507196 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 19370698 ERR9355394 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/004/ERR9355394/ERR9355394_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/004/ERR9355394/ERR9355394_2.fastq.gz d9bd113cdf7a834553b4b4121b5fdea7;ddda2c8cabf336054ef27989f1623453 370461155;402438212 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17850874 ERR9355395 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/005/ERR9355395/ERR9355395_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/005/ERR9355395/ERR9355395_2.fastq.gz 4c99c0e2787eda03f87d84b9f61b1b24;37d4ec613fc4c404b4c37ef7127d2fb9 343309857;386684061 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK007 (5559/2; Grave 9) ENA PRJEB46734 ERS11205114 BSK007.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 27229398 ERR9355396 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/006/ERR9355396/ERR9355396_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/006/ERR9355396/ERR9355396_2.fastq.gz 40f40f56d1c0c3fd8f7ae0e879520d44;86a8ae911d163ba622befcfe9c86ab89 499027409;522602659 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0103.YP1.1 single PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 11189534 ERR9355397 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/007/ERR9355397/ERR9355397.fastq.gz c55908390d1ed9bfa7499360f41c70ac 413508084 -Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0103.YP1.1 single PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 10741737 ERR9355398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/008/ERR9355398/ERR9355398.fastq.gz 70404b926652da7ca5635bf1d3f8c504 420669443 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 28565952 ERR9669404 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669404/ERR9669404_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669404/ERR9669404_2.fastq.gz 08f6257184374b0d08fb58cd136cd4d5;531557473965e8141de22b65b68aebc7 476051648;505185307 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 21671612 ERR9669405 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669405/ERR9669405_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669405/ERR9669405_2.fastq.gz 3cbffa97fc77a5a06018a45cf4f3e6f0;177d4d0a3e41d1bb337aaa42b6403869 418533397;482834091 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0103.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 24188424 ERR9669406 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/006/ERR9669406/ERR9669406_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/006/ERR9669406/ERR9669406_2.fastq.gz 4d573c16446d96c5a4f7deb14fc4c889;9badbf4d316ec0605d4ae2cb628f0931 405107593;436944436 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0301.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22337878 ERR9669407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/007/ERR9669407/ERR9669407_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/007/ERR9669407/ERR9669407_2.fastq.gz 7c6a0da06785393ff5f94e4593ec75ee;342eb4adfd6587b679783c0aa6aacd49 383557902;398186270 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0302.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 24430448 ERR9669408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/008/ERR9669408/ERR9669408_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/008/ERR9669408/ERR9669408_2.fastq.gz 1a68d69231d74fda238ece9e92ccbe1e;cecf1d84fa181b93287039c6d4284aa5 476540172;552408259 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0303.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 24207012 ERR9669409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/009/ERR9669409/ERR9669409_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/009/ERR9669409/ERR9669409_2.fastq.gz f364962168a87191c7d29425a6b343b3;ad03a818612a195386f148fae5d552b3 408638869;440249942 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC004 ENA PRJEB52494 ERS11891572 HGC004.A0101.SE1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 26551742 ERR9669410 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/000/ERR9669410/ERR9669410_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/000/ERR9669410/ERR9669410_2.fastq.gz 019022f35d607d9bac4072f4209e361a;4f355daa6d6f25a11d2c196f4c3e3ef3 444546764;481580713 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC004 ENA PRJEB52494 ERS11891572 HGC004.A0102.SE1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31864446 ERR9669411 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/001/ERR9669411/ERR9669411_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/001/ERR9669411/ERR9669411_2.fastq.gz 4b31c9702e91e5a7e995f6fdb8a5b6b2;46c3fac3f29c58f488932380664c748e 527729143;555916537 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC040 ENA PRJEB52494 ERS11891573 HGC040.A0101.SE1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 38485972 ERR9669414 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669414/ERR9669414.fastq.gz 1ee0e83e64f8573df1942b4d0cfddd89 1160783154 -Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC068 ENA PRJEB52494 ERS11891571 HGC068.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 17993639 ERR9669415 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669415/ERR9669415.fastq.gz 494e69d761f9ee36431741931da748df 581023835 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281cU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3189279 SRR16922678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/078/SRR16922678/SRR16922678_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/078/SRR16922678/SRR16922678_2.fastq.gz c22845b95016472792ec08a0253a9415;e10f6193fa95ab85532c4feb7bb9ba35 108986365;109306900 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281aU-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 57977817 SRR16922679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/079/SRR16922679/SRR16922679.fastq.gz 27176e03efe5e381515cd955f872c823 1942994904 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281aU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2592677 SRR16922680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/080/SRR16922680/SRR16922680_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/080/SRR16922680/SRR16922680_2.fastq.gz 34e2416160ad1583a92eda6051d8b182;ba10d1fb79d8b9ef5a77d784f3517ff9 87100475;90346889 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bU-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 111837207 SRR16922681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/081/SRR16922681/SRR16922681.fastq.gz 62ca90c19247bab62f9998a5b825f94c 3819737404 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3495800 SRR16922682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/082/SRR16922682/SRR16922682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/082/SRR16922682/SRR16922682_2.fastq.gz 857f3ed3853cc79ddfcd911ce6cf1a71;b802f430a2e76cd088173476b52efd15 119819305;125251986 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bnU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3676776 SRR16922683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/083/SRR16922683/SRR16922683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/083/SRR16922683/SRR16922683_2.fastq.gz 4abad9e258ddecc4a1d0d4ad1f140bd7;0bdc955fb6bda32dcb64510c5429df87 125127151;129871239 -Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-SE2 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303224978 SRR16922684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/084/SRR16922684/SRR16922684.fastq.gz e18b6319f1194cbed26a80cde440d1bd 10476984517 -Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 150232327 SRR16922685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/085/SRR16922685/SRR16922685.fastq.gz 3d5e08f53c5cf4e1dc74da670dfa31e9 5306492183 -Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-SE2 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 256832150 SRR16922686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/086/SRR16922686/SRR16922686.fastq.gz eaf0ce90bd1d12fbdc2c6e02e6b8f415 8803285926 -Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 75014612 SRR16922687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/087/SRR16922687/SRR16922687.fastq.gz e995bb05cdb08a25f3191b61ec7c707f 2584866403 -Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3616194 SRR16922688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/088/SRR16922688/SRR16922688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/088/SRR16922688/SRR16922688_2.fastq.gz 288e0ba3cb5cc2e9de07e2998b0d77ef;85bb2ae88af10080f40562e70f965bc1 125560823;130895117 -Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386nU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 6477081 SRR16922689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/089/SRR16922689/SRR16922689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/089/SRR16922689/SRR16922689_2.fastq.gz 20961f2f47f90213e78c4461f0cdade2;a34c440e2d063dbfe58fac6c6366dd82 229471170;245346319 -Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2441151 SRR16922690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/090/SRR16922690/SRR16922690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/090/SRR16922690/SRR16922690_2.fastq.gz 8f303582086d7b47403fd9f42a1069f6;99184254b3d6b3ebc6666d487b6387cd 85187653;90274175 -Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82nU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3360095 SRR16922691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/091/SRR16922691/SRR16922691_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/091/SRR16922691/SRR16922691_2.fastq.gz c1e291e014cbc3f0c374c9482d4d905c;ca16fed20c9417dd8e7de8bc007c1f7a 115435035;119261910 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281cnU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 4534757 SRR17121930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/030/SRR17121930/SRR17121930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/030/SRR17121930/SRR17121930_2.fastq.gz e33fda820ecc4a2da9062aa5d8942526;118830a57465f07c98fc9ed17712b335 152301736;159989354 -Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281anU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 2995886 SRR17121931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/031/SRR17121931/SRR17121931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/031/SRR17121931/SRR17121931_2.fastq.gz 052b3a0bee2a27d38be2f2c97660ba14;31b00a9a2b10cbc48a881d6372c42cb0 101748252;106945706 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.1 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 729746210 ERR9939477 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939477/ERR9939477_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939477/ERR9939477_2.fastq.gz 50c15ebe319e67990f9a37334c780a30;ce5e1a8511fd0eedd4f8ba81e5c92875 13667674645;14293596650 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.1 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 661697490 ERR9939478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/008/ERR9939478/ERR9939478_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/008/ERR9939478/ERR9939478_2.fastq.gz cd98375432de10cc3164f18bc763f2da;f2be8234f3f69f526ae4032fc9a81dcc 12293560312;12907819272 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 386863910 ERR9939479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/009/ERR9939479/ERR9939479_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/009/ERR9939479/ERR9939479_2.fastq.gz a6103ca923cf4558f8b983243479e942;80c6b9547bbdcee683b1ddf84487cbe9 7580269685;7896692160 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 402303864 ERR9939480 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/000/ERR9939480/ERR9939480_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/000/ERR9939480/ERR9939480_2.fastq.gz a3e7aa089f6c47a692e35d117caa7942;549d6bbea8a13e2c8c58a3ba0ae1732d 7741676029;8073956092 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 392650510 ERR9939481 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/001/ERR9939481/ERR9939481_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/001/ERR9939481/ERR9939481_2.fastq.gz 7b07c4480d2d91503b8d802440274bbc;b0e7b3a25956f1dba584020aa22ae8c1 7574744722;7880644002 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 756339688 ERR9939482 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/002/ERR9939482/ERR9939482_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/002/ERR9939482/ERR9939482_2.fastq.gz 74e301ed61c9aafe3311c7840aae185c;a75fabbb15b05ff01cf26792b9a7b76b 14117927036;15000950007 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 563642992 ERR9939483 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/003/ERR9939483/ERR9939483_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/003/ERR9939483/ERR9939483_2.fastq.gz fa3a9cfed7e3499febc3184d8a3e9587;74247fea38a76a1e77d36bdb8c2dfcca 10583302507;11294511972 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 513929068 ERR9939484 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/004/ERR9939484/ERR9939484_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/004/ERR9939484/ERR9939484_2.fastq.gz 1d59d4cbce96d6e9190982f8b0d4de15;d9a48c9260f727966c68ade7328c7c07 9709351022;10147864691 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 700918312 ERR9939485 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/005/ERR9939485/ERR9939485_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/005/ERR9939485/ERR9939485_2.fastq.gz 2d08964594c6525f4d418dfa05103874;9ce9395a07e31ece18cdfd50c1af6d7e 13494914328;13838319529 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 748171294 ERR9939486 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/006/ERR9939486/ERR9939486_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/006/ERR9939486/ERR9939486_2.fastq.gz 6daee6eaf31e4aa3a21741b3c7e7faca;24431da7cf070b7c886ad85ec969a668 13901172930;14274505498 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 753733414 ERR9939487 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939487/ERR9939487_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939487/ERR9939487_2.fastq.gz 3e633137a43d571f3ca69da737b7c7ea;6858e50185b967aafa2f0953c3deca8e 13831587008;14252079086 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005_Run1 double AmpliTaq Gold DNA none NextSeq 500 SINGLE WGS 23925771 ERR9966695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/005/ERR9966695/ERR9966695.fastq.gz 6512c7feab32e963f7f82210b228f1c8 1031655765 -Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005_S14 double AmpliTaq Gold DNA none NextSeq 500 SINGLE WGS 9760844 ERR9966696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/006/ERR9966696/ERR9966696.fastq.gz 553c7dbc04957f43e660f991d0c07ad3 375956668 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-191022-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 359229755 ERR9966697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/007/ERR9966697/ERR9966697.fastq.gz c0d6773c7f57a859d1be6bda62a40cc9 12565068865 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 259040995 ERR9966698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/008/ERR9966698/ERR9966698.fastq.gz 43bdcef98b2ca977a8afd7e4708fd533 8307378258 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 317684494 ERR9966699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/009/ERR9966699/ERR9966699.fastq.gz ac218660ca3c0080ccd20058773ec388 10503875893 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 336269825 ERR9966700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/000/ERR9966700/ERR9966700.fastq.gz 17189bd60b6a20168e3d6f787a2e5cd7 11169730829 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111_PSN650_S10 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 26980519 ERR9966701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/001/ERR9966701/ERR9966701.fastq.gz b5c7a3a202fd61aeb9c0f6d2ed9c5bd9 928505816 -Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111_S1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 339765264 ERR9966702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/002/ERR9966702/ERR9966702.fastq.gz 4576c9e1720e806e5a3de2d258582464 11664154829 -Austin2022 2022 10.1038/s42003-022-03890-z St.LI SRA PRJNA851947 SRS13524932 StLI double KAPA HiFi Uracil+ half-udg NextSeq 500 PAIRED WGS 10007285 SRR19789961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR197/061/SRR19789961/SRR19789961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR197/061/SRR19789961/SRR19789961_2.fastq.gz b1c4f74ac3687e4c116e383a6c67b985;3b585e177b27b035b38488563aa8a620 462241004;561213881 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-5-6_S53 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 5300544 SRR18150952 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/052/SRR18150952/SRR18150952_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/052/SRR18150952/SRR18150952_2.fastq.gz 36479f9b2c5c414f7500f864ec251e85;edfbe72bc66c0438edc0cd9c00e09df5 278245879;306923931 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4_S77 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2912298 SRR18150953 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/053/SRR18150953/SRR18150953_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/053/SRR18150953/SRR18150953_2.fastq.gz 6853f0a854f5a8e4034c08afc3951f10;f0fa9490ba838929304f86d1584c61f9 106299285;120122117 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4D_S57 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 15449232 SRR18150954 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/054/SRR18150954/SRR18150954_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/054/SRR18150954/SRR18150954_2.fastq.gz c2160158a20ddc5cbd093df0e7faa25b;16d239ca5a28034fbe88f79ac3921511 770219695;840992096 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4C_S56 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 7483535 SRR18150955 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/055/SRR18150955/SRR18150955_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/055/SRR18150955/SRR18150955_2.fastq.gz 79f0b40a03e5fe4b9b55f9b4933fe048;12bd023f08a2785bcb49c769649cbc78 374058762;403205476 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4B_S55 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 7650810 SRR18150956 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/056/SRR18150956/SRR18150956_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/056/SRR18150956/SRR18150956_2.fastq.gz 5e0a48d1fe5b3f9db7ced1f72a6676fe;445284db588c5b134253300bb6f149af 397779359;441468012 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4A_S54 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 6081871 SRR18150957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/057/SRR18150957/SRR18150957_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/057/SRR18150957/SRR18150957_2.fastq.gz bd2102966a2d3c67690ea87924b96d70;a3d5f3a3f2ead540828c240f85fa9746 311516546;353562432 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-2_S68 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1428026 SRR18150958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/058/SRR18150958/SRR18150958_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/058/SRR18150958/SRR18150958_2.fastq.gz b24b6e83870d2724caa43b6a3a904e0e;45ea0c641bb7ed468c2886ff9eff7d60 55133527;68889683 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-2_S52 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 5990000 SRR18150959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/059/SRR18150959/SRR18150959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/059/SRR18150959/SRR18150959_2.fastq.gz 8d836e380e09b86386d98c46d843b69e;4452cc959cd6e9cf9355fa734a4cb845 310481422;346847466 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-5-6_S69 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1133130 SRR18150968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/068/SRR18150968/SRR18150968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/068/SRR18150968/SRR18150968_2.fastq.gz 06c8d2e6b996cb826be7daed6cf83de6;ec1e537d768b51fa11251d90770f1ca6 44364260;54648101 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-1_S67 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1497645 SRR18150969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/069/SRR18150969/SRR18150969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/069/SRR18150969/SRR18150969_2.fastq.gz d6573e26220d45576e8554a6010b6615;01e5eadd8888e8835b11ed8a1e292473 61175563;69862712 -Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-1_S51 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 6529733 SRR18150970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/070/SRR18150970/SRR18150970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/070/SRR18150970/SRR18150970_2.fastq.gz b3a43f394fff668fc0afdfa6f386e544;5be9f1428889a5028e047598a7f7c976 346242268;378621522 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Fer.T75 SRA PRJNA791766 SRS11653538 Fer.T75 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 13338644 SRR17604804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/004/SRR17604804/SRR17604804_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/004/SRR17604804/SRR17604804_2.fastq.gz 24542fbf75ab1002a28f0ae5b2d6bade;ff88456861e622ec0376485bf51a83b8 343660159;360826955 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Rip.USD618 SRA PRJNA791766 SRS11653590 Rip.USD618 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 10083762 SRR17604755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/055/SRR17604755/SRR17604755_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/055/SRR17604755/SRR17604755_2.fastq.gz 7b34a5100b9f85b82a81542d9d645f24;b448e9a6bfcb89f90dd117411799f6ee 259617969;270214867 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Rip.USD628 SRA PRJNA791766 SRS11653591 Rip.USD628 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 14434687 SRR17604753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/053/SRR17604753/SRR17604753_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/053/SRR17604753/SRR17604753_2.fastq.gz 3b20949dec7a3078dd02dd0b3b6b1d74;10f6c51bcb9060bf741103a6ac2b609a 376761946;393371719 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Tar.T71 SRA PRJNA791766 SRS11653602 Tar.T71 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 10547211 SRR17604742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/042/SRR17604742/SRR17604742_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/042/SRR17604742/SRR17604742_2.fastq.gz daa4e7790d7aab7bea84bd91ac29e839;78f847e81acc69d917335ebc06d724f9 269520107;282499619 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 TR177 SRA PRJNA791766 SRS11653605 TR177 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 11991702 SRR17604739 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/039/SRR17604739/SRR17604739_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/039/SRR17604739/SRR17604739_2.fastq.gz cb7abc5a1c3c353d85a8c1685d3e3fa2;7e40bf84a5145abcbe98e75dd2bfc65a 300635634;314637119 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 PC-T5 SRA PRJNA791766 SRS11653578 PC-T5 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 318602 SRR17604766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766_2.fastq.gz 840b205e472345eb3da5f5891dabfb10;e328540b328c0ae5f2e81b6772a9bcf3;cb26cb61ce1020f07d0f0ba6f906b4cc 777946;6791795;6962974 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 H07192 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 13363594 ERR7555586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR755/006/ERR7555586/ERR7555586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR755/006/ERR7555586/ERR7555586_2.fastq.gz 9ba1f2709958a6c4e3762e6e9e7d1997;09eac1339c01788ae9173abcfab21c44 245815842;251101447 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 14937140 ERR7563587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563587/ERR7563587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563587/ERR7563587_2.fastq.gz c734156365b58ffe379b25248b9f18eb;08ecb5164204ef86e67a42c77cc6e2da 282977533;298295622 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 H01549 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 13900040 ERR7563607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563607/ERR7563607_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563607/ERR7563607_2.fastq.gz 95108156f164ff3d8ae43b8b77337542;579951f755c9dc397fa43b4c13a3c438 259845072;272521312 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 H07200 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 16287630 ERR7563611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7563611/ERR7563611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7563611/ERR7563611_2.fastq.gz 54169074fb11f9c5bc7d710478a3d21e;5216218ec09ab5e44d596e87b054b834 329995834;354187120 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 H07198 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 15054474 ERR7563615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7563615/ERR7563615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7563615/ERR7563615_2.fastq.gz e0bcb9dbdb334a256951bb8ce5a961c9;5245820a9ba3f28fcebeffefb522b544 295543951;316836016 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 727233150 ERR7564468 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/008/ERR7564468/ERR7564468_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/008/ERR7564468/ERR7564468_2.fastq.gz 336400f05fdbbfe32f2e5a90f7b18be6;ccdbe083671f4c78789189d4508422b1 13221814748;14418948696 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 H07192 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 761040474 ERR7564469 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7564469/ERR7564469_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7564469/ERR7564469_2.fastq.gz c63620ffa0d576b64f0f37ba1197b8fb;e0a3ff7f54b48adfe588a3809247d27f 13267138645;14081073128 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 752610868 ERR7564473 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7564473/ERR7564473_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7564473/ERR7564473_2.fastq.gz e5cd4d3b29b5aab4ebc418216fbe71b7;b5fab1388ab2edf7e63a655231998443 13459018092;14293111561 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 I01668 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 1955478 ERR7565665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7565665/ERR7565665_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7565665/ERR7565665_2.fastq.gz 9dd5fae8f9a687c43a0d6a12437d0b28;5adbf82f40b62ee6b2259aa12fd5c5a4 37543362;39224928 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3577178 ERR7565666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7565666/ERR7565666_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7565666/ERR7565666_2.fastq.gz 7491d3377a7ce3144949da3456d69f1d;dce76434f93a591330734bfc2be1cb55 68423167;72332681 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 14341408 ERR7565669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7565669/ERR7565669_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7565669/ERR7565669_2.fastq.gz 8a73bf6f255caced0b423231e056eb21;f8990716643125ce26462c7b6a39c3d1 327477828;355214169 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 I01676 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 258 ERR7565670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/000/ERR7565670/ERR7565670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/000/ERR7565670/ERR7565670_2.fastq.gz 89419a4a96d3316bca77fed6596179d6;57f55ed7e321d53ceb5a45b577fb8281 6182;6725 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 I01676 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 4903400 ERR7565672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/002/ERR7565672/ERR7565672_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/002/ERR7565672/ERR7565672_2.fastq.gz f33c4505b3a249f61614510ce2b158d8;753efa79ca4650bd04bb8546e96ae4d4 96605446;103491677 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 22662294 ERR7565673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7565673/ERR7565673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7565673/ERR7565673_2.fastq.gz ebd9090965851b8d3e28d458f19d068e;18f70b1ec3bf0447912a8d6c03bb7d6e 496917146;546096303 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 I01674 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 148 ERR7566241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7566241/ERR7566241_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7566241/ERR7566241_2.fastq.gz 6268e8959afafe301df9a06ca19a6cbe;dea1afd51e6bc4dd1f4a63036eca0269 3573;4045 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H31169 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 578 ERR7566245 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7566245/ERR7566245_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7566245/ERR7566245_2.fastq.gz 88398673dccf403249f5865390b122bf;82c3d916d9440b4b4f75e343b037c097 12311;13178 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 I01674 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9156564 ERR7566246 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7566246/ERR7566246_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7566246/ERR7566246_2.fastq.gz 13654d788780011bc8a8fbcaad1c8dbe;e62b94ab26dce825dbb8621024b6c85c 170977998;176516326 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 I01678 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10000560 ERR7566247 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7566247/ERR7566247_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7566247/ERR7566247_2.fastq.gz 10c68363bddfa7b6827d6a3a29cdc31b;150cf87c6c56dc182ae974a0d899a137 194429362;202915434 -Braun2020 2020 10.3390/microorganisms8020298 Chemnitz 1878 (M-0290509) SRA PRJNA309927 SRS5865127 R070-14 double Unknown none Illumina MiSeq PAIRED WGS 3854620 SRR10743037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR107/037/SRR10743037/SRR10743037_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR107/037/SRR10743037/SRR10743037_2.fastq.gz f2ec23ff5b8afc5a2f1ece21b75d1657;fe0a9c9c6a0f3cf352dc05d8b6ef243d 734469183;600088846 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 747930 SRR23219883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/083/SRR23219883/SRR23219883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/083/SRR23219883/SRR23219883_2.fastq.gz bc3d0c921f0dc0c9dfe9cb5b2d792b64;dc0f0655a0b133a48c0272a6eb7072c7 38592517;41460411 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 16 SRA PRJNA926136 SRS16580002 D71b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 30936358 SRR23219884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/084/SRR23219884/SRR23219884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/084/SRR23219884/SRR23219884_2.fastq.gz d442ad5d7b105c58ee1d167603411458;aa3f5c3b56418e405dfb91e65da2f561 1701201556;1787613498 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5549779 SRR23219885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/085/SRR23219885/SRR23219885_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/085/SRR23219885/SRR23219885_2.fastq.gz e969acc9871ef04ce03c30cfcba31def;f9f5d7eb8b579d2df4c53e18adf4edc7 286996773;308626369 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4674209 SRR23219886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/086/SRR23219886/SRR23219886_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/086/SRR23219886/SRR23219886_2.fastq.gz 4f7236a32fd278f0a0de0793ad2fffa6;a2f4d47bd32debc6332e6b823045c324 239904360;254949048 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2466330 SRR23219887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219887/SRR23219887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219887/SRR23219887_2.fastq.gz e3bc16260a2499da2db1cfeb0d05e2c1;08238399a1e747aaaaf596ff305fb85e 123529200;130406223 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2024201 SRR23219888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219888/SRR23219888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219888/SRR23219888_2.fastq.gz df3304ffac810e2896e4b47d638a7b18;f7e52a50495286ebd3d54f9376307b29 100063455;105028320 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1973641 SRR23219889 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219889/SRR23219889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219889/SRR23219889_2.fastq.gz 7bd1c4907fda42dc5851a14285469b03;e7d2aff52d258a1143feaab8d0d61255 60686919;60706112 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1270919 SRR23219890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/090/SRR23219890/SRR23219890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/090/SRR23219890/SRR23219890_2.fastq.gz ea0feb007bd1fdc62cad47cb318ebea8;c439d1fbef89ad5dc94811dcea10f7f6 36314644;36450050 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1480551 SRR23219891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/091/SRR23219891/SRR23219891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/091/SRR23219891/SRR23219891_2.fastq.gz b393bd60a2459e8ee714986bc8ce8cc0;ec0f39fd35dcf908a01ed4cc3d698ed6 76756705;83766964 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4894302 SRR23219892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/092/SRR23219892/SRR23219892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/092/SRR23219892/SRR23219892_2.fastq.gz 6133dec2a2e81386b9eac11cdcee2746;5c9f5dc231f937f93f2c740b8b88a73e 137148728;137854546 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4191605 SRR23219893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/093/SRR23219893/SRR23219893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/093/SRR23219893/SRR23219893_2.fastq.gz cf98e94e0b517f6003343adf11fcf57e;30b4dfc3259aa45677da97e004f60aa4 109566425;110370424 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5799534 SRR23219894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/094/SRR23219894/SRR23219894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/094/SRR23219894/SRR23219894_2.fastq.gz 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double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2458222 SRR23219897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/097/SRR23219897/SRR23219897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/097/SRR23219897/SRR23219897_2.fastq.gz 912c6701e038d857a14a8092324d9bc0;5fc65d3028b0bf7b8c3dcb228e35e223 135115793;145309429 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 945996 SRR23219898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/098/SRR23219898/SRR23219898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/098/SRR23219898/SRR23219898_2.fastq.gz 07d6ab50ca468ff21d8f907ce1536783;35c04a02e37da69924976d95a68d78d8 28421329;29159658 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1351192 SRR23219899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/099/SRR23219899/SRR23219899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/099/SRR23219899/SRR23219899_2.fastq.gz a63daa0018d04f47fde39addc9f3cf23;1b8355fcc45b3c60124887f10744574d 42612637;42731381 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1790763 SRR23219900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/000/SRR23219900/SRR23219900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/000/SRR23219900/SRR23219900_2.fastq.gz fbb33cb247c9a139526f182561ccaf3d;138c7b424a800c35840ca431d6303f3d 90612305;96532361 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2245735 SRR23219901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/001/SRR23219901/SRR23219901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/001/SRR23219901/SRR23219901_2.fastq.gz 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AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4238765 SRR23219904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/004/SRR23219904/SRR23219904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/004/SRR23219904/SRR23219904_2.fastq.gz 1475d1be38b4b42a1122b222bd392d0e;da81822af2777ff8af1fe158cd1e446a 229694800;250062026 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1155636 SRR23219905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/005/SRR23219905/SRR23219905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/005/SRR23219905/SRR23219905_2.fastq.gz 7cd5d2d9c1edaa0943d0fb0fa24e2a9d;85fc6d0b973fc15b3236c85aa875472f 61021597;66537988 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G.25A SRA PRJNA926136 SRS16579986 D62b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 21423100 SRR23219906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/006/SRR23219906/SRR23219906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/006/SRR23219906/SRR23219906_2.fastq.gz 493aa4a7bf18a12f72b49bc7b507604d;6a61b995aefaf4f0b07705611c461828 639115526;641064853 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4484587 SRR23219907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/007/SRR23219907/SRR23219907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/007/SRR23219907/SRR23219907_2.fastq.gz 9331489977830ba0b468788763e664a4;42456fdb759d53f0389f1fdf1e0c2b38 122109311;122844925 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1572704 SRR23219908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/008/SRR23219908/SRR23219908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/008/SRR23219908/SRR23219908_2.fastq.gz 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Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1325886 SRR23219927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/027/SRR23219927/SRR23219927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/027/SRR23219927/SRR23219927_2.fastq.gz e0ff4bdf739ee535ed367ba1ef9222aa;6a383c6c7f417309d307170179a4aa5a 35480738;35755848 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4731835 SRR23219931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/031/SRR23219931/SRR23219931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/031/SRR23219931/SRR23219931_2.fastq.gz 9032bba2394b91e1146499f9771aea32;af614db255f3d1d36aed72e1800e2925 240478133;262420800 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5029228 SRR23219932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/032/SRR23219932/SRR23219932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/032/SRR23219932/SRR23219932_2.fastq.gz 178a853f40a76b50fdb915ee58fc50e5;bce48642eb4ec8f1af332afc4a0462e5 255020371;281409566 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1164071 SRR23219933 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/033/SRR23219933/SRR23219933_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/033/SRR23219933/SRR23219933_2.fastq.gz 9e981422b6bc33c547c3fe7a5285ee77;8d609cef309b394e3d569b21387fc2e0 59873606;64517695 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3526903 SRR23219934 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/034/SRR23219934/SRR23219934_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/034/SRR23219934/SRR23219934_2.fastq.gz 7574940c45bb3a4b1300f5909ac0fbfd;b08b4814585fdbec48c315a142666333 180371930;197037420 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1934819 SRR23219935 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/035/SRR23219935/SRR23219935_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/035/SRR23219935/SRR23219935_2.fastq.gz e53952699bb4b562a93aa714d6768ad5;cd2e9c7e0d48a4c95a0b207abf55682d 98554767;108685131 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4582057 SRR23219936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/036/SRR23219936/SRR23219936_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/036/SRR23219936/SRR23219936_2.fastq.gz 6a559a8d0b90e43f13e9d9ccb1b9a826;bc2c74ccacb0c1dff40c8b2e2062b487 237050542;258155509 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1690135 SRR23219937 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/037/SRR23219937/SRR23219937_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/037/SRR23219937/SRR23219937_2.fastq.gz d654fccb2c853c22f4da92408f7524b1;8af4093493d31786877fb3397f887078 84405699;91283534 -Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 397829 SRR23219938 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/038/SRR23219938/SRR23219938_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/038/SRR23219938/SRR23219938_2.fastq.gz 10c92c6ada28df6e75f8735b611cc29f;b0a89d664936eaf8587e2270a2e2cf1e 18107830;19331058 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212o double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 7331316 SRR23219939 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/039/SRR23219939/SRR23219939_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/039/SRR23219939/SRR23219939_2.fastq.gz bbb70b6727a96f8a8e27f50fe74f6db0;f88b4783c29ec8db7598381f063c6fc0 387943394;419972314 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212n double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 8269841 SRR23219940 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/040/SRR23219940/SRR23219940_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/040/SRR23219940/SRR23219940_2.fastq.gz 6562793cfdba2eb6e03a82fc0f75f04b;9b4b28638166af08216d5dd705bed132 443626604;472141240 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2222335 SRR23219941 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/041/SRR23219941/SRR23219941_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/041/SRR23219941/SRR23219941_2.fastq.gz 11830fbdbcf8a4a95275e6f4b3383bda;ff680d655b5646ed2e56335c20eeeba7 109807733;125986168 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5913018 SRR23219942 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/042/SRR23219942/SRR23219942_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/042/SRR23219942/SRR23219942_2.fastq.gz 1d4a71a612f789772c458792dcf8d0dd;72e1407ee32f6cdef4e80218f92c7748 324885545;363823400 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1042634 SRR23219943 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/043/SRR23219943/SRR23219943_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/043/SRR23219943/SRR23219943_2.fastq.gz 098a1a3b3a330bf3f95180ee6ffd275c;c2f70e7fa51bbc544532b3ed15772ff9 25348486;26200272 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G.25A SRA PRJNA926136 SRS16579986 D62a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 845921 SRR23219944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/044/SRR23219944/SRR23219944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/044/SRR23219944/SRR23219944_2.fastq.gz e5cd4f5463318294be7099c69ccc9cf7;9c7b10edebbf7299626a6825158c222d 23647454;23843164 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5967460 SRR23219945 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/045/SRR23219945/SRR23219945_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/045/SRR23219945/SRR23219945_2.fastq.gz 270f38194d8d51b397e29c69bf1f5703;a1203cf66258d74b443907d567d3801e 176079450;177092979 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1192874 SRR23219946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/046/SRR23219946/SRR23219946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/046/SRR23219946/SRR23219946_2.fastq.gz 870eb22a4c320f37931a96f83d87e012;a0d589cee8c741c63155049937e003cc 25774384;26512612 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3179921 SRR23219947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/047/SRR23219947/SRR23219947_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/047/SRR23219947/SRR23219947_2.fastq.gz edf37e98bf9b228fe5d0ff7aad2874ea;23193bc991a14c648d166371a2a9c030 93412602;93886290 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3664836 SRR23219948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/048/SRR23219948/SRR23219948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/048/SRR23219948/SRR23219948_2.fastq.gz 6e1187dffd749d38766abffb7577f5cb;eb003b91c983698b4b940f6ddfeaae3f 188547731;200927425 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3193090 SRR23219949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/049/SRR23219949/SRR23219949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/049/SRR23219949/SRR23219949_2.fastq.gz 758c5252b3e1edac7015029e54693ca7;2ffd140e6591d64e294695fc021c0f00 102471638;102919299 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 933 SRR23219950 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/050/SRR23219950/SRR23219950_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/050/SRR23219950/SRR23219950_2.fastq.gz 1c06a11315374afd3ef23399b75674cf;9784c7fd63893b9bb7250d69263e9e4c 49611;54529 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2532483 SRR23219951 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/051/SRR23219951/SRR23219951_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/051/SRR23219951/SRR23219951_2.fastq.gz fce4a9daf470805cedb804e7a1bf713c;1a220a0f35d9de2c2858c1240c27efa4 125896450;131479169 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1755 SRR23219952 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/052/SRR23219952/SRR23219952_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/052/SRR23219952/SRR23219952_2.fastq.gz 96c511fbbf50cd88016e6f960d2e2a29;d970a6f3eb0dbd129d8412b7c62d5bcd 92960;104606 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2509433 SRR23219953 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/053/SRR23219953/SRR23219953_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/053/SRR23219953/SRR23219953_2.fastq.gz 9b40473e24b22a853e1b1131925227fa;1393db1415450466816fcd3b12e76c02 79412092;79647260 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1660940 SRR23219954 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/054/SRR23219954/SRR23219954_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/054/SRR23219954/SRR23219954_2.fastq.gz b3685376a278929b474c33fb5db4378d;bdcf51730ffe485354ae68469af4f5b7 47398073;47460364 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Gr GCx15 SRA PRJNA926136 SRS16579984 D51b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 27619274 SRR23219955 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/055/SRR23219955/SRR23219955_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/055/SRR23219955/SRR23219955_2.fastq.gz 1cd4286e823b27a568982da30b2e6782;1cef09996a55bf39a6e67a40ea2a887b 800497432;805892929 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187n double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4363313 SRR23219956 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/056/SRR23219956/SRR23219956_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/056/SRR23219956/SRR23219956_2.fastq.gz db53de8497a32cf446918671666941e5;95d95bfbdfa6491f883e1a1f0f445199 126442328;126780006 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5542469 SRR23219957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/057/SRR23219957/SRR23219957_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/057/SRR23219957/SRR23219957_2.fastq.gz 2700cef32b05c1f0221c6583d80fc415;1b4f8d676d0a008b64709e7e1107eedc 294441477;319340137 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4732630 SRR23219958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/058/SRR23219958/SRR23219958_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/058/SRR23219958/SRR23219958_2.fastq.gz 40a169960da314c3151f950689d47f3b;5b3938e5f1a1342c9daa6baa1afc1282 129001400;131930156 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2809920 SRR23219959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/059/SRR23219959/SRR23219959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/059/SRR23219959/SRR23219959_2.fastq.gz 0fe979bfc779a8add555f07b06036aee;1ecce45930d0eee01d18dca1303e84a9 76589555;77328398 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 914343 SRR23219960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/060/SRR23219960/SRR23219960_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/060/SRR23219960/SRR23219960_2.fastq.gz 0ddcad627ec5339290180bd365cbba83;fba4b32891f95d4e349b66377c71cb61 43864042;48278621 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3579081 SRR23219961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/061/SRR23219961/SRR23219961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/061/SRR23219961/SRR23219961_2.fastq.gz 6ca7700b40bb3055e735a759203a0f9d;0f23505709fd738eab043d1288e29825 70837143;75890636 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1288478 SRR23219962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/062/SRR23219962/SRR23219962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/062/SRR23219962/SRR23219962_2.fastq.gz 83168d7287da362c5ee46dbe289b10ad;e2252f3ff89c039bc9458f5c12c39038 61997827;65850949 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4801837 SRR23219963 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/063/SRR23219963/SRR23219963_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/063/SRR23219963/SRR23219963_2.fastq.gz ea14834eaf22341c8a2a02d0c3433e47;2a2cc5bdfc2fd0d9fc01180159cbe740 135939204;136205881 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 327118 SRR23219964 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/064/SRR23219964/SRR23219964_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/064/SRR23219964/SRR23219964_2.fastq.gz b190ba440aa8b444877a288d1c45d51e;3235ed191167134290668af5579c1c77 10129385;10193385 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 729289 SRR23219965 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/065/SRR23219965/SRR23219965_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/065/SRR23219965/SRR23219965_2.fastq.gz 2be33dfe4bfa1bac6551c3eca1870d57;ac55c741a63de21b6fa982e3cbe3245d 22433275;23150693 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Gr GCx15 SRA PRJNA926136 SRS16579984 D51a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 872087 SRR23219966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/066/SRR23219966/SRR23219966_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/066/SRR23219966/SRR23219966_2.fastq.gz b63fd2a1f0cdd345973c594014bd6fa5;fc372ee6c46483e7eb92f1a5bf238169 24076532;24396232 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 6524234 SRR23219967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/067/SRR23219967/SRR23219967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/067/SRR23219967/SRR23219967_2.fastq.gz 0c2b990c22fee19e4585578f6ac4dc93;3a7fb2217aa113f24b3b4b3b06e6d7db 361447409;388855138 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1797532 SRR23219968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/068/SRR23219968/SRR23219968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/068/SRR23219968/SRR23219968_2.fastq.gz 088f635c569f382fbb7b1def23781d67;5ac0efba06a8293d9bcca3afce12bc44 56834134;57171092 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2632030 SRR23219969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/069/SRR23219969/SRR23219969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/069/SRR23219969/SRR23219969_2.fastq.gz d567179d0997245625c334a460ae235e;9cfc15ef4b7a2c9aa208c9fe3749c7f2 131833694;139594342 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 974547 SRR23219970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/070/SRR23219970/SRR23219970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/070/SRR23219970/SRR23219970_2.fastq.gz 65b6e50aaac18c6beb2dd82aa94e48f5;30fb6ef76835afc6580d03558550d7ed 43174359;46818134 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 25B x98 SRA PRJNA926136 SRS16579982 R36b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 29807887 SRR23219971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/071/SRR23219971/SRR23219971_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/071/SRR23219971/SRR23219971_2.fastq.gz 6977a4589856323cd5ed70b616ddb665;41a182e92e1a585532137c5f4963a14a 1646702784;1722206987 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 25B x98 SRA PRJNA926136 SRS16579982 R36a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1116614 SRR23219972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/072/SRR23219972/SRR23219972_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/072/SRR23219972/SRR23219972_2.fastq.gz 9e828b403e5e22fb70b4e0f002f7779b;74cbd6d45d4619d2b345e2d283d2deb7 29220111;29447695 -Eaton2023 2023 10.1016/j.cub.2023.01.064 ID 319 SRA PRJNA926136 SRS16579981 R21b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 40704606 SRR23219973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/073/SRR23219973/SRR23219973_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/073/SRR23219973/SRR23219973_2.fastq.gz bf003e9c4ccfdd4279997001bc8d75bd;37764e03464075799ffb10990310a52c 1148449320;1152857651 -Eaton2023 2023 10.1016/j.cub.2023.01.064 ID 319 SRA PRJNA926136 SRS16579981 R21a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1810523 SRR23219974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/074/SRR23219974/SRR23219974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/074/SRR23219974/SRR23219974_2.fastq.gz 6386c943bb73741d161f19a61e291c20;eec07d809c42531d7457031681ce12cb 48310791;48885388 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 861 x1035 SRA PRJNA926136 SRS16579973 D75b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 27178045 SRR23219976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/076/SRR23219976/SRR23219976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/076/SRR23219976/SRR23219976_2.fastq.gz ae81be4cd033c4a8af73a7e6c3040fee;65657a44e17ebf45ceb79569d11c8827 1509645860;1580397073 -Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 861 x1035 SRA PRJNA926136 SRS16579973 D75a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1010003 SRR23219987 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219987/SRR23219987_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219987/SRR23219987_2.fastq.gz 790245b2caa19915e731a876d9c14535;655f6b4426101be3fe5d18cb2646c928 29472327;29540704 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A19 x21 SRA PRJNA926136 SRS16579972 D24b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 46083075 SRR23219988 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219988/SRR23219988_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219988/SRR23219988_2.fastq.gz 56a32e847d7c701239e352ea76ca5d73;daec638d13ad8a8b1cf60fcc802712d8 1360814811;1366205662 -Eaton2023 2023 10.1016/j.cub.2023.01.064 A19 x21 SRA PRJNA926136 SRS16579972 D24a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 933793 SRR23219989 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219989/SRR23219989_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219989/SRR23219989_2.fastq.gz 37108199f42f1296c3aacc9afb9ace7b;bfe803386227735b073e3376403fb4f5 49932402;58928402 -Rifkin2023 2023 10.1038/s42003-023-04582-y BBayA SRA PRJNA930765 SRS16665771 baa001 single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE WGS 1225105 SRR23320768 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR233/068/SRR23320768/SRR23320768.fastq.gz 0fd88effcdfcbdebff88b97308947bf8 15127737 -Sarhan2023 2023 10.1186/s12915-022-01509-7 3045 ENA PRJEB44723 ERS10216488 3045 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 52823444 ERR8202909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR820/009/ERR8202909/ERR8202909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR820/009/ERR8202909/ERR8202909_2.fastq.gz 261a6f5fe988cffdf421303d7581b087;24bbe3ab0c9f460ef777936e3d5e676b 1775631371;2004262086 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A100 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2254233 ERR11262423 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11262423/ERR11262423.fastq.gz 0df3bc0db4d6f92b38c9eb3c9b0d4511 65651502 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A1655 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2041845 ERR11262430 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11262430/ERR11262430.fastq.gz 743a38f38c4270de9271c16286bfcd21 62171808 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A3150 single AccuPrime Pfx DNA none unspecified SINGLE WGS 510590 ERR11262436 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11262436/ERR11262436.fastq.gz 62a91ee900823d2d67cee4cf9527adba 14230608 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A3151 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1411720 ERR11262437 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11262437/ERR11262437.fastq.gz 72fd18bbf4dd73a738be6594193c528d 39599900 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A28 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 2784401 ERR11262439 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/039/ERR11262439/ERR11262439.fastq.gz efda0b93fead0feb1d14e7b484e7e470 82233713 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A29 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 4957302 ERR11262440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/040/ERR11262440/ERR11262440.fastq.gz 923d1d492e0e3f7d1825759ed1320dcf 151586034 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A33 single AccuPrime Pfx DNA none unspecified SINGLE WGS 18975450 ERR11262442 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/042/ERR11262442/ERR11262442.fastq.gz ce3f54ddebcd07b5ecf55f33a34c46df 526121745 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A66 single AccuPrime Pfx DNA none unspecified SINGLE WGS 441669 ERR11262443 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/043/ERR11262443/ERR11262443.fastq.gz 225acf1046627ad3a3ff789fbdfc9353 13226242 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A67 single AccuPrime Pfx DNA none unspecified SINGLE WGS 640668 ERR11262444 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/044/ERR11262444/ERR11262444.fastq.gz 036601a2f04b74299c1ea0c7fa681499 18565561 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A222 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1715182 ERR11262424 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11262424/ERR11262424.fastq.gz fff8483ec07ebcb70d02e435713a7a9a 48594271 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A19 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 4574726 ERR11262434 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11262434/ERR11262434.fastq.gz 7a705aa6bfe9df42ab147b6b4358af11 140468354 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A16 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1172993 ERR11262427 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11262427/ERR11262427.fastq.gz 58bffb6875dbdac5d975a18dff1e08ba 35252097 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A17 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 2483805 ERR11262428 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11262428/ERR11262428.fastq.gz 763d15e322653e4a7efd764bc26c1f89 76858824 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A1654 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2230754 ERR11262429 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11262429/ERR11262429.fastq.gz f4f7f1b4e1f9a9afc59a1729e7b7bd8c 70236772 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO3305A10 single AccuPrime Pfx DNA none unspecified SINGLE WGS 210905275 ERR11262432 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11262432/ERR11262432.fastq.gz f2d99b5cff37f2516bbab3178cceaa05 5916318597 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A20 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 4993942 ERR11262435 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11262435/ERR11262435.fastq.gz f92d3a4df6c21da19660d83e54fce012 137494640 -Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A68 single AccuPrime Pfx DNA none unspecified SINGLE WGS 4945098 ERR11262445 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/045/ERR11262445/ERR11262445.fastq.gz 3103c1e011059ce978f8eb548edbd7b3 136788974 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A18 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1532377 ERR11262433 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11262433/ERR11262433.fastq.gz 93f4f7e8e743f6796bd604f74991aa16 49162720 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A15 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1090587 ERR11262426 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11262426/ERR11262426.fastq.gz d4383815606c1ecfe49ebccedcca6015 35127077 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A30 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 12974948 ERR11262441 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/041/ERR11262441/ERR11262441.fastq.gz 73e0ffb4a3c1d5bcbaaefca9bb4930c1 394518804 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891342 SKO719A22 single AccuPrime Pfx DNA none unspecified SINGLE WGS 3773285 ERR11262422 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11262422/ERR11262422.fastq.gz 9a852c1b5b6e2dd8f2ef217682357438 121523751 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891342 SKO3305A4 single AccuPrime Pfx DNA none unspecified SINGLE WGS 756209056 ERR11262431 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11262431/ERR11262431.fastq.gz 0341ba5f2e31cb6b1b9adb85db84b2d0 21198299666 -Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891343 SWA3304A26 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 95147891 ERR11262438 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/038/ERR11262438/ERR11262438.fastq.gz cd15d4f78840490886a804d090781b5b 2781054839 -Swali2023 2023 10.1038/s41467-023-38393-w C10928 ENA PRJEB61230 ERS14909714 SKO719A1330 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1655114 ERR11262425 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11262425/ERR11262425.fastq.gz 113798f9c11a7f7af20b824b13ec7bb3 47631779 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr13_i13_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 613320 ERR10822513 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822513/ERR10822513_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822513/ERR10822513_2.fastq.gz df75bb4f8a2c9bfaa48439b993340e21;d5defc5f56aec153be31adcb77af0316 14749107;14483761 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr19_i37_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 190286 ERR10822515 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822515/ERR10822515_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822515/ERR10822515_2.fastq.gz a962623e18a5620b8be28d6588683612;5c313aa1eceee4214d799c2048866d13 4589523;4747485 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 148820 ERR10822519 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/019/ERR10822519/ERR10822519_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/019/ERR10822519/ERR10822519_2.fastq.gz b2ac9c11f8bf69bf17bac7597203ea2f;d6920ef7457419dba846aa7e4b9356e3 3661844;3559207 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr21_i41_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 284610 ERR10822521 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822521/ERR10822521_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822521/ERR10822521_2.fastq.gz cb8c6eeb1dc1c6d769e83f30db854498;8861b87f0e7cb2dd936731cf58c9060c 6768690;6591602 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 276966 ERR10822525 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822525/ERR10822525_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822525/ERR10822525_2.fastq.gz b3a6d203941566c554d004f5f448ea51;dea7a72f4bbec34ed3dd208369b22ea5 6349860;6577270 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 309244 ERR10822526 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822526/ERR10822526_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822526/ERR10822526_2.fastq.gz ba1732481ab18ab9edb95e732e533590;f48e8a9c8bacea1b71b0bb81993034af 7213766;7443380 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 253470 ERR10822527 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822527/ERR10822527_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822527/ERR10822527_2.fastq.gz 6015740b76c364869912471a90327089;235d19e0f5483d77fb7943486223b56e 6087856;5865967 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555611 MAJ75t3_Ages_2_7012_lr50_i79_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 34534 ERR10822531 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822531/ERR10822531_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822531/ERR10822531_2.fastq.gz b551cc1950a142fc10ddedc6effc6f7e;f91b93f4d26d1bde8274e93504317e90 777830;741677 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 253028 ERR10822532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822532/ERR10822532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822532/ERR10822532_2.fastq.gz 05f7209213371756ac27bdff47ba0e1f;c9e35eb957b7563c12229e4b51903f68 5901182;5728714 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 178688 ERR10822536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822536/ERR10822536_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822536/ERR10822536_2.fastq.gz 3dc944040f1c8d45a7ac0c7d3332cb4d;69880f966951c403db348cc8de4d36d9 4150912;4299395 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 188334 ERR10822540 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822540/ERR10822540_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822540/ERR10822540_2.fastq.gz 4b212ebdc4cdf4375d2b0bd786d0e79e;4eed216462d23d2c11fda3e12349078e 4274236;4412630 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr51_i54_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 14688 ERR10822541 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822541/ERR10822541_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822541/ERR10822541_2.fastq.gz cc7a4011e4603157b4b3afd1023a9f6e;efaa1da1d80dbedaaf22e06fef16df10 307577;294779 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 48230 ERR10822542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822542/ERR10822542_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822542/ERR10822542_2.fastq.gz 8b404484784b62905f0fc968248a1bcf;74e329d3091b9b68757db0078c82d52a 1126803;1161691 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr20_i38_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 35444 ERR10822543 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822543/ERR10822543_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822543/ERR10822543_2.fastq.gz b5cbff2cd63142e4eac81fada3fc571f;1424ebf5ae26a26c9ee706f81cd8071d 833427;848639 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 69962 ERR10822546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822546/ERR10822546_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822546/ERR10822546_2.fastq.gz 36cd933ba011cee389705e40d87e6ca3;bad641627aedb149d0b0e549ea8654cd 1604421;1666555 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 268508 ERR10822548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822548/ERR10822548_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822548/ERR10822548_2.fastq.gz 5ffd1df644c852696c78ebfd25647f8a;135f47ceaa81e0f3ff090cf563e844ed 6272657;6379536 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 176578 ERR10822549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822549/ERR10822549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822549/ERR10822549_2.fastq.gz 90edf6db0e2363f7d622aea1bc875147;99cea5ab66a1ad2eed174f39682fd6d1 4242709;4142988 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr15_i21_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 209310 ERR10822550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822550/ERR10822550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822550/ERR10822550_2.fastq.gz 9c119a739899c6e944e28a50b9557e9f;2b176e0db709864718bc09fb97bf971d 5055396;4959484 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 221956 ERR10822553 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/012/ERR10822512/ERR10822512_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/012/ERR10822512/ERR10822512_2.fastq.gz 533d1361c7f79a867416eaa80b7f49f7;b308d9e748e28fd270fb7ca5f976a00d 6448793;6181279 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr22_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 156986 ERR10822516 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/016/ERR10822516/ERR10822516_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/016/ERR10822516/ERR10822516_2.fastq.gz 2b47dfdec5c82c18fd457f108013850a;486dd547338ec51cb4d0f20f0457a1b4 3716505;3849565 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 85184 ERR10822517 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/017/ERR10822517/ERR10822517_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/017/ERR10822517/ERR10822517_2.fastq.gz 705f5a386939ed66d8aaddcab0918e06;2e9c16e8d36f26f04a57b151394ed971 2058262;2117577 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr20_i38_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 345054 ERR10822520 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/020/ERR10822520/ERR10822520_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/020/ERR10822520/ERR10822520_2.fastq.gz 0dfc35f6e69225fb7b82b78325183195;c9d6d8f4b85893bbf350393efdc5579d 8134117;8330889 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr22_i44_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 266138 ERR10822522 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/022/ERR10822522/ERR10822522_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/022/ERR10822522/ERR10822522_2.fastq.gz 915046e186a04ad9d47d05f562d48b03;95974217fc7c43140a526a3e311b6191 6089596;6320343 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr23_i46_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 271584 ERR10822523 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/023/ERR10822523/ERR10822523_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/023/ERR10822523/ERR10822523_2.fastq.gz 38da46c9e624baf841b6b5b67948465e;78e50fa0344294144ff7052ca0e0abd6 6316370;6543931 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr24_i47_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 255016 ERR10822524 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/024/ERR10822524/ERR10822524_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/024/ERR10822524/ERR10822524_2.fastq.gz 6812e3f1eed794983faf2dbd695f6e7f;85d8adf23114d2e11990a2c16cb79e5f 5958486;6129795 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr11_i11_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 193984 ERR10822533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/033/ERR10822533/ERR10822533_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/033/ERR10822533/ERR10822533_2.fastq.gz 07b00719486d96122816a21c3be386b1;69028728396351c1af63723560f67fc5 4569458;4798563 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 221010 ERR10822538 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/038/ERR10822538/ERR10822538_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/038/ERR10822538/ERR10822538_2.fastq.gz 8ac364af891c40515606ae47cb994f9a;fae1ea41febc6ff03db590377da3bb2b 5124147;5337316 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555614 MAJ75t6_Ages_2_8158_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 59734 ERR10822544 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/044/ERR10822544/ERR10822544_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/044/ERR10822544/ERR10822544_2.fastq.gz fe3c40e8f9fb402bd149f15059150ca3;7bad476d6a3363dfddec0f3cbb36d300 1365932;1395305 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr22_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 146382 ERR10822547 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/047/ERR10822547/ERR10822547_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/047/ERR10822547/ERR10822547_2.fastq.gz ed08bfff4d630c186afc077fb0800751;d082f61e7f53e77bb16f7b613135d994 3257760;3340800 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 303082 ERR10822551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822551/ERR10822551_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822551/ERR10822551_2.fastq.gz 9e8e3aa2c3f43c811103703bcadf1f61;59f302cc2066f30191b5666df1752ee5 7301978;7109922 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr19_i37_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 660892 ERR10822554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822554/ERR10822554_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822554/ERR10822554_2.fastq.gz ed028cf87e9adbf052c6ea9a27fd3ad6;141b61fefd29f2d31a6a4629c14e85c6 15218819;15618951 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr20_i38_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 649992 ERR10822555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822555/ERR10822555_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822555/ERR10822555_2.fastq.gz 6ebe44281fdbe901ebe448754f70ee23;291d960618ed6db604eeb1ae2b2e8d0d 15720983;15440100 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr18_i32_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 124426 ERR10822514 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/014/ERR10822514/ERR10822514_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/014/ERR10822514/ERR10822514_2.fastq.gz 55a187d177a30fcc5303db2c83625041;3dfdb80cca1fddccf6a812cd645104aa 3031197;2940931 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr24_i47_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 40972 ERR10822518 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/018/ERR10822518/ERR10822518_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/018/ERR10822518/ERR10822518_2.fastq.gz 01dfdf9f03c04eab52b3733b19e4375b;7709da0e101dc7f3dc72eb85bb4f7d53 1023734;1003584 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 20984 ERR10822528 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822528/ERR10822528_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822528/ERR10822528_2.fastq.gz 9e279be0e7951e189d5da114f63e05db;2d792aed5b65e4ef995f8d373f6fcc41 481156;468364 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 138616 ERR10822529 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822529/ERR10822529_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822529/ERR10822529_2.fastq.gz 457299fb4b2e977897237a19d1b4c11e;cb127f777a81021792941d9c4fae3d0d 3321358;3183341 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr48_i77_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 166496 ERR10822530 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/030/ERR10822530/ERR10822530_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/030/ERR10822530/ERR10822530_2.fastq.gz e18cf1094ad03e18e69c147c5a815ea8;df38b424a3a871f341408466b1239bd7 3761623;3899224 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 207174 ERR10822534 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822534/ERR10822534_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822534/ERR10822534_2.fastq.gz cd6188eeac7a0e477d4025a99499d20b;8e52f0426cf7e77446b233421c99e20b 4778908;4910987 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 179736 ERR10822535 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822535/ERR10822535_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822535/ERR10822535_2.fastq.gz 65a86ac1abc9211a1a1fdc57144aecae;38769028f185c77cbdaafc099876ccd7 4265045;4153864 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr15_i21_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 205776 ERR10822537 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822537/ERR10822537_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822537/ERR10822537_2.fastq.gz a4fceac55fbe721999215ed4b692a2b4;9d0623e4dc40062c0532ea943c2e4e09 4767175;4896790 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr17_i27_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 180368 ERR10822539 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822552/ERR10822552_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822552/ERR10822552_2.fastq.gz 85d55349b34ef1a30a0a4ae5733cf187;0145747d89561c137d7737d48302dfdf 6972929;7160482 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr21_i41_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 469492 ERR10822556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822556/ERR10822556_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822556/ERR10822556_2.fastq.gz e010b88d1d62a2b8f35063be44df2980;29a1f57ced061ea6d98bba1d2b3f1819 10952967;11151304 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr22_i44_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 566430 ERR10822557 fastq_all 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MAJ75t9_Ages_2_8347_lr24_i47_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 808856 ERR10822211 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822211/ERR10822211.fastq.gz f8cd1d2613442ec856d6b023465d19ab 35747354 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr24_i47_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 416826 ERR10822215 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822215/ERR10822215.fastq.gz 3614913a93c7fb1755a1792b115409b7 17572953 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 341871 ERR10822200 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822200/ERR10822200.fastq.gz 6e5b73b1183aeaa0f240781b37e38173 15408771 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 299949 ERR10822203 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822203/ERR10822203.fastq.gz 749d45270b6551df9648928004503ff9 14595291 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 293598 ERR10822205 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822205/ERR10822205.fastq.gz f049d24f918deec201936dd244c4c401 13265667 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 MAJ75t9_Ages_2_8347_lr21_i41_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 460707 ERR10822208 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/008/ERR10822208/ERR10822208.fastq.gz b728345a2cd6458d33e0f2b6f94d8448 21316471 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555617 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MAJ75t_Ages_2_6107_lr22_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 210016 ERR10822168 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/068/ERR10822168/ERR10822168.fastq.gz 1a24a9eb260175011e7f180d48028572 8749326 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 120929 ERR10822169 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/069/ERR10822169/ERR10822169.fastq.gz 5808c67a32fcb0e05c46ccf9aa4fa98b 5114801 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 197109 ERR10822171 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/071/ERR10822171/ERR10822171.fastq.gz 257dfa6c89402d8782040c8f64da3703 8252956 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr21_i41_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 620026 ERR10822173 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/073/ERR10822173/ERR10822173.fastq.gz 1cf0bef75aae46a45722e0d9cb8074a7 24408696 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 577699 ERR10822177 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/077/ERR10822177/ERR10822177.fastq.gz aedc93b87492d2efa96cb6758dc5a409 22312210 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 727982 ERR10822178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822178/ERR10822178.fastq.gz c914d77ebe58c1e88eee17c68ed72d7f 27585447 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 48323 ERR10822180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822180/ERR10822180.fastq.gz 8a05c20cead4a5ff90cef4de086e79a4 1784279 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555611 MAJ75t3_Ages_2_7012_lr50_i79_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 45824 ERR10822183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822183/ERR10822183.fastq.gz 9639fe96efe49531e196b9bae1014eb8 1879467 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 658285 ERR10822188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822188/ERR10822188.fastq.gz 059192071f626a3a20e11f2e24ade6d3 26167003 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 695900 ERR10822190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822190/ERR10822190.fastq.gz 67f583d230bf821dab6a94d584d2f50e 27387699 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 97053 ERR10822194 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822194/ERR10822194.fastq.gz d1e260503b40dac5c6b5cff77579896e 4197534 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555614 MAJ75t6_Ages_2_8158_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 150002 ERR10822196 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822196/ERR10822196.fastq.gz daebf306ed28297c83fb113b9a24f300 5555212 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555614 MAJ75t6_Ages_2_8158_lr21_i41_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 356277 ERR10822197 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822197/ERR10822197.fastq.gz e17faeb7bbed259046f4051d5a2bfb06 12128727 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 134530 ERR10822198 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822198/ERR10822198.fastq.gz 063f66564bd7350b465578253cecd0f5 5651278 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr22_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 156120 ERR10822199 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822199/ERR10822199.fastq.gz e8e192e96e89f1fac901f59df78c304a 6542036 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822459/ERR10822459_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822459/ERR10822459_2.fastq.gz 8a5411c177c3909fe325201f58ce445a;128cff7c67e1b113fc40e3c6a8af0113 4320649;4460708 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr52_i63_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 11918 ERR10822461 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/061/ERR10822461/ERR10822461_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/061/ERR10822461/ERR10822461_2.fastq.gz 3156878c4f990012f37100d19722f8fd;19210322133d2bec6a54d70ba00a684f 285413;278900 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555599 MAJ46t4_Ages_2_8154_lr17_i27_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 38266 ERR10822466 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/066/ERR10822466/ERR10822466_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/066/ERR10822466/ERR10822466_2.fastq.gz 7e59f336083abf8ec93e859a3f745b64;8036a4bb9e2e1b73f4a99fb8f6aefbb1 853972;868092 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555600 MAJ46t5_Ages_2_8155_lr18_i32_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 72228 ERR10822468 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/068/ERR10822468/ERR10822468_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/068/ERR10822468/ERR10822468_2.fastq.gz f760d3638134de76d6bb4df2ea36585a;409319f41602575fc46332f8f2e95286 1648600;1706065 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr31_i59_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 55714 ERR10822471 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/071/ERR10822471/ERR10822471_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/071/ERR10822471/ERR10822471_2.fastq.gz c7ca5f3cfb958166f8aef60f2c69cebe;64709e624e393dfc44400b5247cf7dbe 1213630;1268015 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 43868 ERR10822473 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/073/ERR10822473/ERR10822473_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/073/ERR10822473/ERR10822473_2.fastq.gz cfead88d1ca68374c8c9f41d5aa34d16;9e7c435206d7ebd8140dc614208e392a 966288;993971 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 61668 ERR10822474 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822474/ERR10822474_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822474/ERR10822474_2.fastq.gz 6ba1c30ffd732b88ecb16d1fc42b27db;e0c0a35d0337b67c84e40b0221160dce 1352898;1388157 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr02_i02_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 419314 ERR10822481 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822481/ERR10822481_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822481/ERR10822481_2.fastq.gz 3c465020f7907613095521f3e677ce35;d3e1ae3b48ba818a81f5e23d5b01ebe6 9775993;9888844 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr04_i04_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 301372 ERR10822483 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822483/ERR10822483_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822483/ERR10822483_2.fastq.gz 1fa7f6eca674949b3b513cfb8e7f8dfa;e09fc85bda270c69b22f74497171e7af 7019684;7123955 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 146172 ERR10822488 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822488/ERR10822488_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822488/ERR10822488_2.fastq.gz a1601f7afeb5d7fa817d7e23c0d26c3c;7b7836e34ce52fdf4c85554bbdc2ccac 3313775;3239909 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr11_i11_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 261456 ERR10822490 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822490/ERR10822490_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822490/ERR10822490_2.fastq.gz ac60709046e8e3ec0bea4b2d0acad5f9;147489c6e3805df0e1c95f38ef4222a9 5931059;6073331 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 332128 ERR10822491 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/091/ERR10822491/ERR10822491_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/091/ERR10822491/ERR10822491_2.fastq.gz 99fcc0a5a52a86977947ae0bb6bc753a;33b1f0f2d12e7eb41cd0bbda431cec82 7356445;7407974 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr24_i47_T30min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 286964 ERR10822494 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822494/ERR10822494_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822494/ERR10822494_2.fastq.gz b2261cc588c00003ff7a93753f8f44b7;9136dbdb87a799f7fa7e8f5240d46beb 7074382;6862288 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr25_i52_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 8916 ERR10822499 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822499/ERR10822499_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822499/ERR10822499_2.fastq.gz 27433324dc3c8236563cff958350c98b;9987126d30729e6e89fea714988a2ffe 207868;215515 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr27_i55_T1min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 13460 ERR10822500 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822500/ERR10822500_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822500/ERR10822500_2.fastq.gz b6c17521fa03691874d5fc19cfbdaf1b;e31f7643acfd86383f68124d2f55012d 313208;320919 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr30_i28_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 33828 ERR10822503 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822503/ERR10822503_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822503/ERR10822503_2.fastq.gz a10f2ec5598d7f82e15e18520cb92625;c0d46c80929be6c0fe2d256542bd9e0e 795902;809949 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr12_i12_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 521438 ERR10822445 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822445/ERR10822445_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822445/ERR10822445_2.fastq.gz 86e1301d1a23c460cfa3d827a3b066e7;a1f9c9a35688aa1c9624567f237d3ea7 11334069;11240557 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr15_i21_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 249538 ERR10822449 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822449/ERR10822449_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822449/ERR10822449_2.fastq.gz b801a709ddd0ec430905d4d98a339aa7;5ebad915bab421e1f3500462338f9903 5648717;5812453 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 89478 ERR10822452 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822452/ERR10822452_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822452/ERR10822452_2.fastq.gz b538d75cec0ab7faddc022081090d568;11b20f4b56da876f9b5fe7861c3b22be 2029041;1965589 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr43_i72_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 159692 ERR10822453 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822453/ERR10822453_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822453/ERR10822453_2.fastq.gz 132e55e812745ba5d7874e4248608ad8;c922668f939be40770c21c2de62b14b0 3689997;3801617 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr46_i75_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 126120 ERR10822455 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822455/ERR10822455_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822455/ERR10822455_2.fastq.gz d95559425228186b708263b4d7c449d0;6c71a6e8d0083dcae342bcbd6637c48d 2829194;2982036 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr46_i75_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 186506 ERR10822456 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822456/ERR10822456_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822456/ERR10822456_2.fastq.gz 05775206dbd51f8af61b4236b0d9b069;cb489ed5fe4458ddba0bc7fe1e369538 4501287;4349757 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr47_i76_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 252144 ERR10822457 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822457/ERR10822457_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822457/ERR10822457_2.fastq.gz 76fca19548325ecc388e154a26d8e1e1;ed0891749ded78589eb5bd66daa3cd77 5867051;5640779 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555597 MAJ46t2_Ages_2_8128_lr42_i71_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 222892 ERR10822463 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/063/ERR10822463/ERR10822463_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/063/ERR10822463/ERR10822463_2.fastq.gz 12704286076fd2e7ef4dea370ebd7dac;5b44bcb1bc116c3c7abc7ec22a5df78f 5000377;5251348 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 15558 ERR10822476 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/076/ERR10822476/ERR10822476_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/076/ERR10822476/ERR10822476_2.fastq.gz 4908ccd75824018baa2462d07364cf34;d35ea58a2b5ed5e7e6d553133447281c 344471;358483 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr41_i70_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 750 ERR10822479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/079/ERR10822479/ERR10822479_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/079/ERR10822479/ERR10822479_2.fastq.gz 112cd8d449ad4f83669d5ae1371e2599;fca16017c83f08f0ab5f84b83824e74d 17150;16783 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr03_i03_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 201074 ERR10822482 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822482/ERR10822482_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822482/ERR10822482_2.fastq.gz 75b4727f7b0d32b438aeccba5c6a50db;8a9681c8e7c499d5c88ef6fe74205af7 4910290;5031128 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 248506 ERR10822486 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822486/ERR10822486_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822486/ERR10822486_2.fastq.gz c6f4b2017f2732e9574758c57c865b9b;380b86744a12773372aebe767c33a0e9 5645938;5723847 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 324034 ERR10822487 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822487/ERR10822487_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822487/ERR10822487_2.fastq.gz 343a48280fff1ffad2e4e4276f0ec884;a848b41f586af8f0533a6beb797e5a07 7164009;7217243 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr22_i44_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 29610 ERR10822492 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/092/ERR10822492/ERR10822492_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/092/ERR10822492/ERR10822492_2.fastq.gz d6e2dd721ef179a2ef0a2df3ccbc28ab;207fc7a6b11e56102b95821df705fb5a 736630;704791 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr25_i52_T40min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 381212 ERR10822495 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822495/ERR10822495_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822495/ERR10822495_2.fastq.gz 88e202c7aaebaa6a1ecb693582d43f1f;2734e28d31df0a423840733505dfacf0 8567160;8709598 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr24_i47_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 17556 ERR10822498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822498/ERR10822498_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822498/ERR10822498_2.fastq.gz 3c76bb5d2ce39a3acca37107c8c52310;f894d7a352ca3a77eb87c7c1195227b9 418723;423232 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr28_i56_T2.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 8104 ERR10822501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822501/ERR10822501_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822501/ERR10822501_2.fastq.gz 5acfddb4713ac9f7e8891df6d7635e73;5cd3697c0e2eb7651d8bb2d542f73a9e 191713;195331 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr29_i57_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 13106 ERR10822502 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822502/ERR10822502_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822502/ERR10822502_2.fastq.gz 275c4482b6979f5dfcb43906e22afcd7;1da3da9a7be0117bc98bdbf42e75b188 313426;308508 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr12_i12_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 228148 ERR10822446 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822446/ERR10822446_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822446/ERR10822446_2.fastq.gz eed952add15978c300e080471d431cd1;eb2ef4faa1e07107dac7cfad21b7dd7e 5030943;5134605 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr14_i16_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 237966 ERR10822448 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822448/ERR10822448_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822448/ERR10822448_2.fastq.gz 25cd86dcced04df5537c72b62fea49de;c9ab86d6ce0b5d399692a54092f6827f 5454022;5338942 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr44_i73_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 251748 ERR10822454 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822454/ERR10822454_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822454/ERR10822454_2.fastq.gz 5f29fcff0c48f1629fb9c33390a5f44d;4898038d836f43c5910bf2f9127bd34e 5571644;5810481 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr48_i77_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 191970 ERR10822458 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822458/ERR10822458_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822458/ERR10822458_2.fastq.gz 1010121acfd81efedf319487a2b53187;04063dd7f78b56a7f044981a855ccdf6 4489386;4316433 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 34984 ERR10822460 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822460/ERR10822460_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822460/ERR10822460_2.fastq.gz a3304604297107ee1755f95f13b64b80;e9163b6195f85c097d5f965938c41598 773900;812031 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 5156 ERR10822462 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822462/ERR10822462_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822462/ERR10822462_2.fastq.gz fdcd7528e7f01101520561600bc8af4c;42431bb45490007205bda388d8214f4b 128054;130536 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555598 MAJ46t3_Ages_2_7008_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 41534 ERR10822464 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/064/ERR10822464/ERR10822464_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/064/ERR10822464/ERR10822464_2.fastq.gz 86f9576e359a669d5b46690fc619c75e;635c6f133d4933f70e1d9fb0d3149715 857693;891963 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555599 MAJ46t4_Ages_2_8154_lr04_i04_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 101666 ERR10822465 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/065/ERR10822465/ERR10822465_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/065/ERR10822465/ERR10822465_2.fastq.gz 8edf54fe2f8f1f8093cebf4b342dffd7;5d80b297f13bc4f90dde7c13d14e1c62 2379817;2355944 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555600 MAJ46t5_Ages_2_8155_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 49616 ERR10822467 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/067/ERR10822467/ERR10822467_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/067/ERR10822467/ERR10822467_2.fastq.gz 6bf3c877ff130d9da4fc51625277d47f;79f0740e545584ac9c1a727837938dee 1210098;1162513 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr06_i06_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 75510 ERR10822469 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/069/ERR10822469/ERR10822469_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/069/ERR10822469/ERR10822469_2.fastq.gz 0e7666087a44b3b7f49deb6a9c2a22b1;430a412bfb1be46f02251e5f0134ad33 1815495;1858447 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr19_i37_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 92024 ERR10822470 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/070/ERR10822470/ERR10822470_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/070/ERR10822470/ERR10822470_2.fastq.gz 184124d2eef83c34424e21f099f7b9f8;ff112a7fd2a6542760a2fb0850f167ed 2099906;2130656 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 11078 ERR10822472 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/072/ERR10822472/ERR10822472_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/072/ERR10822472/ERR10822472_2.fastq.gz fd93ce539e788454060c6ce75a56dde7;7d15dba37af7bbb68356fd6a0a4ae4d3 245530;240260 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 3954 ERR10822475 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/075/ERR10822475/ERR10822475_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/075/ERR10822475/ERR10822475_2.fastq.gz 5976f1c4ff132d2e42db5cebef254c9e;2cc9aa8fcc1706edd4406f5b95c26538 82570;85954 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 17878 ERR10822477 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/077/ERR10822477/ERR10822477_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/077/ERR10822477/ERR10822477_2.fastq.gz 531daddc5d4fd7c2a1851ea4514f4f95;87bfba2d6ec4f58a04a23a353fed44b0 399797;407725 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 17152 ERR10822478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822478/ERR10822478_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822478/ERR10822478_2.fastq.gz 0fabaec4c56d38eae6bd834886c1d4cb;548a97c1d85aed083d2f0e51e80befe3 384215;397462 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr01_i01_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 396658 ERR10822480 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822480/ERR10822480_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822480/ERR10822480_2.fastq.gz cb9ead1bf864a46f5a5b11c0d9bcea25;f4cbb7112b1af15b723b47025ee321c5 9139649;9210105 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 307406 ERR10822484 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822484/ERR10822484_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822484/ERR10822484_2.fastq.gz 6420958130c682089793d419c60e8b6b;16061adb16ef95d34048a87a9bb7d290 7334787;7246489 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr06_i06_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 282060 ERR10822485 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822485/ERR10822485_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822485/ERR10822485_2.fastq.gz e8867c9883987c8a55b2712441a84fa9;b671e1c34278c62db1558ee38d7c20fd 6702466;6781970 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 253796 ERR10822489 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822489/ERR10822489_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822489/ERR10822489_2.fastq.gz 26f045662f6dc90285f867c7fb623d62;79770aa6eb2763fb0f7616855683a4bd 5641215;5740018 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr23_i46_T20min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 130850 ERR10822493 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/093/ERR10822493/ERR10822493_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/093/ERR10822493/ERR10822493_2.fastq.gz 7f6db9d1b1b0492324cf8275d4ca807b;0c6239fca4031c9ade3c469ca28672c1 3076750;3172929 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr28_i56_T60min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 288670 ERR10822497 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822497/ERR10822497_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822497/ERR10822497_2.fastq.gz 2ac80bd76d6ab00ef9ef84a11c2651bf;281487ed8ceb34b7a40ccd50bcac2e79 6767461;6382388 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr31_i59_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 40634 ERR10822504 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822504/ERR10822504_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822504/ERR10822504_2.fastq.gz 039bf3cea247383c92e965414cc91a1c;20cd7db600804630f8759afb97b1786b 918236;931861 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr12_i12_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 932338 ERR10822096 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822096/ERR10822096.fastq.gz 36be0490dbe33bde678a4598028d979e 33079385 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10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr17_i27_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 230362 ERR10822103 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822103/ERR10822103.fastq.gz d1e8fcccc80501fa5d80047657218fa3 9163976 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr43_i72_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 640689 ERR10822105 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822105/ERR10822105.fastq.gz b59631c3306ba8a6065a6aa46b205f59 23973354 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr46_i75_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 95705 ERR10822107 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/007/ERR10822107/ERR10822107.fastq.gz 4bf98b1916f6e1a5c5d15aed2f2d73ef 4538894 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr46_i75_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 495021 ERR10822108 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/008/ERR10822108/ERR10822108.fastq.gz 6f84626a7ad48146bd8ecb7502325800 18919363 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr48_i77_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 941727 ERR10822110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/010/ERR10822110/ERR10822110.fastq.gz ff434ad4bb5610084cadc667a0c50427 33028409 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 16902 ERR10822114 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/014/ERR10822114/ERR10822114.fastq.gz 764056c9190b82dda99a5278550bf923 548477 -Clavel2023 2023 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10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr12_i12_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1303653 ERR10822097 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822097/ERR10822097.fastq.gz a2afdd06cfe602229cc9ae2b44329112 45870193 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr13_i13_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 130794 ERR10822099 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822099/ERR10822099.fastq.gz 70dd1d6ca75cfd0ba51e5d76425cf53e 5103725 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr44_i73_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1000485 ERR10822106 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/006/ERR10822106/ERR10822106.fastq.gz 2eb30bfc99be0f5748164c411ee05e91 35675095 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr47_i76_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 979718 ERR10822109 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/009/ERR10822109/ERR10822109.fastq.gz 764bdcd99645cfc960c928b2812b1b95 34685106 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr50_i79_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 672845 ERR10822111 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822111/ERR10822111.fastq.gz feb1db8b827232e2d8e8d56f5cc4a74e 24293659 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 127549 ERR10822112 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/012/ERR10822112/ERR10822112.fastq.gz e76f7a2bcadf0baaebeef76a4cfa789d 4441369 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555597 MAJ46t2_Ages_2_8128_lr42_i71_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 163546 ERR10822115 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822115/ERR10822115.fastq.gz 2cdf91625ab9ea93d38e66d6939b4519 7676657 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555598 MAJ46t3_Ages_2_7008_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 39480 ERR10822116 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/016/ERR10822116/ERR10822116.fastq.gz 5fd5a22ee0f284ca86110342450bc555 1763973 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555600 MAJ46t5_Ages_2_8155_lr18_i32_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 109671 ERR10822120 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/020/ERR10822120/ERR10822120.fastq.gz da28f4192d4ee579abc0eec41f7b7ad0 4740334 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr06_i06_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 622818 ERR10822121 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822121/ERR10822121.fastq.gz d73d2e4a01bf64e9a889f24bb5e28dda 23709573 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 527280 ERR10822126 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822126/ERR10822126.fastq.gz ecd586a64f32fcd11911807f3f0eed13 19076858 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 106934 ERR10822128 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822128/ERR10822128.fastq.gz 1209dfff216ee5c10c5d030927abc8b3 3886705 -Clavel2023 2023 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10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 461958 ERR10822138 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/038/ERR10822138/ERR10822138.fastq.gz 191a13c200a28027a3f31c5a232664a6 18821496 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 255703 ERR10822140 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822140/ERR10822140.fastq.gz b967087054fa2fc506652dacf87f330b 10309495 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 406752 ERR10822141 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822141/ERR10822141.fastq.gz c013e43b8f0bdce11076840638c3f533 16586988 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 536417 ERR10822143 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822143/ERR10822143.fastq.gz 1bb8fd7a6263869660832c6b379490e0 21749073 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr23_i46_T20min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 254297 ERR10822145 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822145/ERR10822145.fastq.gz d8597622317118b21b4d5c6eb784c1d5 9261384 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr30_i28_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 58573 ERR10822155 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822155/ERR10822155.fastq.gz 24dae65515468977fefbbbae6762ceef 2170897 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr16_i26_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 199044 ERR10822102 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822102/ERR10822102.fastq.gz d57a373c1ee8a916e575143b97aace23 8153084 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 413988 ERR10822104 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822104/ERR10822104.fastq.gz 3add7bb2bdb8c33e88b768229af1988c 14524780 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr52_i63_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 34265 ERR10822113 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822113/ERR10822113.fastq.gz b65b7bb987fecb7085cb04d11752f8ca 1187149 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555599 MAJ46t4_Ages_2_8154_lr17_i27_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 51492 ERR10822118 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/018/ERR10822118/ERR10822118.fastq.gz 165c3d23b83acdb0538b4e7bb152b976 2345279 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555600 MAJ46t5_Ages_2_8155_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 95385 ERR10822119 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/019/ERR10822119/ERR10822119.fastq.gz d9910ea34051dfb02e6cc537e69ee77c 4051016 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 25594 ERR10822127 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822127/ERR10822127.fastq.gz 1e80fcddd630acaa40b3d62537100b22 899461 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 124589 ERR10822129 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822129/ERR10822129.fastq.gz 3b6bd12c699e47fcf347725ca16fdbd8 4629343 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 583321 ERR10822136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822136/ERR10822136.fastq.gz 0b894b42a54eaddbc3b9f4d4785d4210 25710653 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr06_i06_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 539159 ERR10822137 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822137/ERR10822137.fastq.gz 37af0d088182e2c6c170221d0a821b44 23814915 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 533811 ERR10822139 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/039/ERR10822139/ERR10822139.fastq.gz 078fb17c1291d14d57fb156f66e5a993 21511414 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr11_i11_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 406181 ERR10822142 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822142/ERR10822142.fastq.gz 3940c949db78d96377bce1566f155f6d 17402612 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr24_i47_T30min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 409002 ERR10822146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822146/ERR10822146.fastq.gz 74541c834bd2ec8a8769d547730d506b 16492173 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555604 MAJ46t9_Ages_2_9070_lr27_i55_T50min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 386302 ERR10822148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822148/ERR10822148.fastq.gz 518750d969c2205696281c90455dc997 14733021 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr24_i47_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 20579 ERR10822150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822150/ERR10822150.fastq.gz 41d8877f6861eadc707dd89a64538642 935848 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr25_i52_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 12497 ERR10822151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822151/ERR10822151.fastq.gz d592b01e723ad86870b75725801f0005 501200 -Clavel2023 2023 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Illumina MiniSeq SINGLE Targeted-Capture 86755 ERR10822089 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822089/ERR10822089.fastq.gz 7d37bf4f01cf0e1a537c4c54ea7458bd 3979904 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555591 MAJ38t5_Ages_2_8152_lr02_i02_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 47366 ERR10822436 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822436/ERR10822436_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822436/ERR10822436_2.fastq.gz 0b48bd7d523bf83f89af5c5b4ba2c01c;12e86516536591328dbf00373d93bc64 2329519;2235312 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555591 MAJ38t5_Ages_2_8152_lr15_i21_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 49035 ERR10822437 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822437/ERR10822437_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822437/ERR10822437_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822434/ERR10822434_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822434/ERR10822434_2.fastq.gz 4d2e89ed6ca3ee84d921ae80e1d33185;d3abdf11ac1b8adb793ae0ea6e8853c4 1128227;1159428 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555590 MAJ38t4_Ages_2_8151_lr14_i16_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 49962 ERR10822435 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822435/ERR10822435_1.fastq.gz;ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822435/ERR10822435_2.fastq.gz 5e07ff8339372e823d3f9df557f3cc0c;09a3883449a1a45afb2744cdde44e020 2407850;2322418 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555589 MAJ38t3_Ages_2_6987_lr44_i73_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 136985 ERR10822085 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822085/ERR10822085.fastq.gz 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78880 ERR10822432 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822432/ERR10822432_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822432/ERR10822432_2.fastq.gz 93bc8bf43efb76497ee9bd0caccf6b35;5e5a831a40ac56b474b82b5ed3a01aa4 3804437;3615350 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555587 MAJ38t_Ages_2_6099_lr09_i09_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 992975 ERR10822074 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822074/ERR10822074.fastq.gz 1b0d180ffc7d1684c1572f28a08e4917 36253244 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555587 MAJ38t_Ages_2_6099_lr09_i09_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 381108 ERR10822075 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/075/ERR10822075/ERR10822075.fastq.gz b9178964ce9a2fbe9ba115984bc9ef76 14339509 -Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ38 ENA PRJEB59234 ERS14555587 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PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr12_i12_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2524983 ERR10822387 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822387/ERR10822387.fastq.gz 9f125d9cc7f53946103a5526f8bad4ff 104120907 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr14_i16_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1974861 ERR10822389 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822389/ERR10822389.fastq.gz ba7ce328c89a5119fa54699399cca811 81958803 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr8_i8_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2182752 ERR10822390 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822390/ERR10822390.fastq.gz 85be5915a78fedb0c2ed5ae05ed3a2e9 89747907 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr9_i9_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2109118 ERR10822391 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/091/ERR10822391/ERR10822391.fastq.gz 78f2ff39d9409558de3cca332c8fe5bb 85867892 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555670 AMIENS268t2_Ages_2_9072_lr21_i41_T60min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 405697 ERR10822384 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822384/ERR10822384.fastq.gz 0ca599b80470d95d046b0dc3fb90f9a0 16545660 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555670 AMIENS268t2_Ages_2_9072_lr18_i32_T30min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 458603 ERR10822381 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822381/ERR10822381.fastq.gz dc4385bd34b345a33f01da0efb600954 18831853 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555669 AMIENS268t_Ages_2_8642_lr41_i70_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2924008 ERR10822378 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822378/ERR10822378.fastq.gz 343d16b7c995f36fd6c8a186b4606670 131346822 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr10_i10_T1min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2386081 ERR10822385 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822385/ERR10822385.fastq.gz 99d642feb74c3408db887d2ae05d7342 99533489 -Clavel2023 2023 10.1016/j.isci.2023.106787 AMIENS268 ENA PRJEB59233 ERS14555671 AMIENS268t4_Ages_2_9347_lr13_i13_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1831592 ERR10822388 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822388/ERR10822388.fastq.gz 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PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 214852 ERR10822579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/079/ERR10822579/ERR10822579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/079/ERR10822579/ERR10822579_2.fastq.gz fb7c7015463934ab536643295c6f103e;e4a540b404c66db63ffc149848f40aa2 4829970;4871410 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr7_i7_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 294358 ERR10822584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822584/ERR10822584_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822584/ERR10822584_2.fastq.gz 5f69afcc31bff88a3dd816e52ce6bcd9;1c4cdc39196090dfd3245d44e14f20cd 7133712;6956752 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr8_i8_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 315288 ERR10822585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822585/ERR10822585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822585/ERR10822585_2.fastq.gz 4d3acf053c95124cba16cfa3afd63718;932bb4de6e92ec1cbe79c3933bda7a49 7484100;7316920 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 210456 ERR10822588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822588/ERR10822588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822588/ERR10822588_2.fastq.gz 90ac990be159107aa0c696410e839747;748e35544393f2138e2f39913d7c045f 5058454;4928547 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 272164 ERR10822589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822589/ERR10822589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822589/ERR10822589_2.fastq.gz c48815a29c2dfbbcdd615b716ed9b06a;c966fcba70e7dbbdc1761296b9194c45 6564698;6334334 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 186652 ERR10822590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822590/ERR10822590_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822590/ERR10822590_2.fastq.gz 0e881df158ad207e73f308c229a17919;a1e974f410463b00f5f3514bdd47ba31 4626819;4467161 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 221874 ERR10822594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822594/ERR10822594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822594/ERR10822594_2.fastq.gz ebb72e326ceca0737c512ddc315b7c35;64c8cd6d972a49e2823f1044fa9f6bd0 5148216;5342874 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr19_i37_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 321824 ERR10822595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822595/ERR10822595_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822595/ERR10822595_2.fastq.gz e816bb8bac0a5c029908576596c2b257;5eb1ef1021a0974682878d9949002602 7804870;7570292 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr3_i3_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 190024 ERR10822574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822574/ERR10822574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822574/ERR10822574_2.fastq.gz 44c9ffdb7f3e4ea7917c6730dccf3fb0;c97bb8374c47bbb3ce00a24f8c98b52b 4495222;4678091 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr31_i59_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 383286 ERR10822581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822581/ERR10822581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822581/ERR10822581_2.fastq.gz f7dd9d3bf59aa5200c6076ca591fd22c;06669b279a3dc582d8ce3c6649f2cff1 8429974;8609550 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr5_i5_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 354766 ERR10822582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822582/ERR10822582_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822582/ERR10822582_2.fastq.gz 72367436825516b452c70dbd7ebfda2f;85ba6dd650943c14860da8654df3fe43 8345007;8569255 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr20_i38_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 252396 ERR10822596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822596/ERR10822596_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822596/ERR10822596_2.fastq.gz e668cec49e35b4eedd056aaa70799961;10583df119178d9e02656f22f8d70296 6186144;5996576 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 143768 ERR10822571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/071/ERR10822571/ERR10822571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/071/ERR10822571/ERR10822571_2.fastq.gz ac7f72f64d9b07159412074398ae2057;58a8c4e0d9403146ad31b60a3cd21cf9 3216525;3408052 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr2_i2_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 604222 ERR10822573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/073/ERR10822573/ERR10822573_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/073/ERR10822573/ERR10822573_2.fastq.gz e196e0725276b3a33a182d84f12d2f40;8e4f27ab312d6f7d80c7c79604f9511d 14092167;13756778 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 233606 ERR10822576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/076/ERR10822576/ERR10822576_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/076/ERR10822576/ERR10822576_2.fastq.gz 3fec786bb5019d9ea2ece4ca5beabfad;23f48aeba7f2356a8a96fb730f161ca7 5306689;5215348 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 195360 ERR10822577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/077/ERR10822577/ERR10822577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/077/ERR10822577/ERR10822577_2.fastq.gz c9b6308f6e0d5add1dedf7022368559f;38858cdbf2c7836587914f1f7c0eefd8 4400942;4492367 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr30_i58_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 314666 ERR10822580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822580/ERR10822580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822580/ERR10822580_2.fastq.gz 257572b67c8cf027333e00a061c67f3b;a28eb89f672d9d5d49cdbdd1c82a50ab 7177474;7310686 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr6_i6_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 156850 ERR10822583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822583/ERR10822583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822583/ERR10822583_2.fastq.gz e811c9e76d3a4853e48cab4beb351b6d;994d0f377e33447f786e3f9b0918ea1a 3768793;3685537 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 301154 ERR10822586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822586/ERR10822586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822586/ERR10822586_2.fastq.gz 658486183967c069481e41fd3b295521;ac8f1828303a9d70affa4f9ffd918d4b 6928113;7132692 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 295620 ERR10822587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822587/ERR10822587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822587/ERR10822587_2.fastq.gz d5bc93c05b06a13e5c181f809bfc7bfc;2a0fadcee3f00d0bfc25bc1b5c78a073 7104294;6859529 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr15_i21_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 256534 ERR10822591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/091/ERR10822591/ERR10822591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/091/ERR10822591/ERR10822591_2.fastq.gz f5af19b25747551aefcb2d3280d31521;b2917963b6be1ea24b834dc92b2bdbd7 6310975;6106230 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 252534 ERR10822592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/092/ERR10822592/ERR10822592_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/092/ERR10822592/ERR10822592_2.fastq.gz fdb99dce389509a9ef2638a2f78b38c4;e3f8577b7dd55a539024ec7e2745e84f 5947277;6223395 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr17_i27_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 265510 ERR10822593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/093/ERR10822593/ERR10822593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/093/ERR10822593/ERR10822593_2.fastq.gz 87a90c3e7d85ebf27ed4540360908a03;923cbbfbd445ca43580756f9e6c8f208 6243927;6532880 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 422107 ERR10822228 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822228/ERR10822228.fastq.gz aee7515a571d7bd6e50fe647e2e50773 17320064 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 380905 ERR10822230 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/030/ERR10822230/ERR10822230.fastq.gz bf2aeb5175d8f2c8f624b876a2af8d6c 15900570 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr30_i58_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 565311 ERR10822232 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822232/ERR10822232.fastq.gz 8922e6ccaf87421d502766bcbffba846 23846846 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr5_i5_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 811089 ERR10822234 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822234/ERR10822234.fastq.gz 34da1f252a24164be19329b45cc02aca 34143840 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 519094 ERR10822240 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822240/ERR10822240.fastq.gz fd3e6d15d2d1a91c6309e6d86e8f9fe6 21333021 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 538495 ERR10822241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822241/ERR10822241.fastq.gz 30c02e8a5b3d1ef8f1dcf59313b4d29c 20995532 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 450434 ERR10822242 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822242/ERR10822242.fastq.gz 26a4f3605efdfded6f364dc3b9a3bc58 17435690 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 376331 ERR10822244 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/044/ERR10822244/ERR10822244.fastq.gz 78ea24660eec876dc38c42d401f15660 16170086 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 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RAY1015t_Ages_2_6112_lr2_i2_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1127771 ERR10822225 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822225/ERR10822225.fastq.gz 59b95bddc4762a27fb5d6f7d341efa0c 45866597 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr3_i3_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 419961 ERR10822226 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822226/ERR10822226.fastq.gz 4a48b7113b0cb18bca5f64ced9df34be 17414634 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr31_i59_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 751007 ERR10822233 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/033/ERR10822233/ERR10822233.fastq.gz fc42c11ec1b6b2f5335187abc13dfe98 30404830 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr6_i6_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 322738 ERR10822235 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822235/ERR10822235.fastq.gz c4fa4dff836942003346095bb4b00146 13897536 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr8_i8_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 761890 ERR10822237 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/037/ERR10822237/ERR10822237.fastq.gz f1dda26018b1283558e0bd054f3b969f 31473897 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 829654 ERR10822239 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/039/ERR10822239/ERR10822239.fastq.gz 9fcc0e6afddc0be601f49b7c096cb55a 32978363 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr15_i21_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 563058 ERR10822243 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822243/ERR10822243.fastq.gz 2c2a54f4d5efb6bebb099ba39f8e83c1 22343361 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr17_i27_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 432661 ERR10822245 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822245/ERR10822245.fastq.gz c51e019ca2c27cdf387f4417015b572c 18107143 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 526741 ERR10822246 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822246/ERR10822246.fastq.gz 211b129c389bfea635aa5189faacd6ff 20213616 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr4_i4_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 706863 ERR10822227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822227/ERR10822227.fastq.gz f9817c07b04297a27fb5ffe43122ce94 26861113 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 367751 ERR10822229 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822229/ERR10822229.fastq.gz f1461f8cd2a6fea7809c480bcd1b33b2 15238954 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 404850 ERR10822231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822231/ERR10822231.fastq.gz 2fc70fccddd6701a90ae1ab24518fcb7 16573463 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr7_i7_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 599264 ERR10822236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822236/ERR10822236.fastq.gz 1abab78f9046bd25f7890f87509b3451 26061029 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 776793 ERR10822238 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/038/ERR10822238/ERR10822238.fastq.gz adc87cf2cf6b175173b5029f3a5fae67 31451368 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr19_i37_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 867800 ERR10822247 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/047/ERR10822247/ERR10822247.fastq.gz 51c150c7b57a76f3394fc690b0c78819 33042078 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr24_i47_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 892733 ERR10822249 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822249/ERR10822249.fastq.gz a9ceef0b30e14ee30acfcf589807fcd0 32618342 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 534726 ERR10822250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822250/ERR10822250.fastq.gz ba74763395be8fc0b3c9c1e17a5041e5 22164495 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 520740 ERR10822251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822251/ERR10822251.fastq.gz 50e41d86d5fc61318d6fadb88a4b35c2 21264440 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 423853 ERR10822252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822252/ERR10822252.fastq.gz 70dbc2494ef09cb385c93c4e824083c7 17361291 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 425692 ERR10822253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822253/ERR10822253.fastq.gz 7f7891069af8c4ebbb3c171788b7aa5f 16964428 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 427280 ERR10822254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822254/ERR10822254.fastq.gz 53848bd7a4f1b6bca0fd81309fd49a6b 18150795 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 359410 ERR10822255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822255/ERR10822255.fastq.gz b25924b40c520f77c94f0f9c8e25a011 15373129 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 580505 ERR10822256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822256/ERR10822256.fastq.gz d52f4544ec943ce8ba4763f9fb367a17 24717603 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 324072 ERR10822257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822257/ERR10822257.fastq.gz 8c3a46008e7b06e52d7a5207b252a3d8 14387884 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 456830 ERR10822258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822258/ERR10822258.fastq.gz caa3384e1cee554c18a7129b657e15ee 19388526 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 707959 ERR10822259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822259/ERR10822259.fastq.gz cfc385f645a35329ddb3f4261d7f9bd4 30084140 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr24_i47_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 77478 ERR10822597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822597/ERR10822597_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822597/ERR10822597_2.fastq.gz 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10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 114183 ERR10822600 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822600/ERR10822600_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822600/ERR10822600_2.fastq.gz c207df75ae1be8872247651b737a231c;e69cb337b3b30bbffe2a491898bb330f 5495353;5305370 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 125261 ERR10822601 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822601/ERR10822601_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822601/ERR10822601_2.fastq.gz 7c0c8f20ddacaf0fb68e1b16da367c18;3906a320ff8e8aebe45f4f1cf23e2f4d 5648540;5827869 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 119510 ERR10822602 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822602/ERR10822602_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822602/ERR10822602_2.fastq.gz c1557b367782366111e7f6020b66e227;408496f27e0b2ee781b477f1320cfe26 5524223;5585107 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 112501 ERR10822603 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822603/ERR10822603_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822603/ERR10822603_2.fastq.gz d46880b15cc613f8a4e20dbfc86d9f50;f393e9437fb0e6204bce45459b2a73f1 5243249;5168690 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 164635 ERR10822604 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822604/ERR10822604_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822604/ERR10822604_2.fastq.gz fe81135d79b0c9f2b1723b54ca157ff3;f722d321985ba6a7672d508443db6278 7474392;7625354 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 117881 ERR10822605 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822605/ERR10822605_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822605/ERR10822605_2.fastq.gz 2a1ed3547741aa053e4cd2eeb4bfb5c2;f7a0bc373e6e308c1c597eca02c651c9 5591684;5433241 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 129252 ERR10822606 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/006/ERR10822606/ERR10822606_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/006/ERR10822606/ERR10822606_2.fastq.gz 626ff5ce3b8e4eaa80476f1a44bfd387;50423edaba2f123f059b24b60a5bec25 5913523;6017707 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 217678 ERR10822607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/007/ERR10822607/ERR10822607_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/007/ERR10822607/ERR10822607_2.fastq.gz 85e12194117c61cf203ee8ef29fe0dad;7cd4fb2a982ad57c085f2bafcc4f35ed 10032881;10218796 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr30_i58_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 488633 ERR10822260 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822260/ERR10822260.fastq.gz 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Targeted-Capture 107529 ERR10822609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/009/ERR10822609/ERR10822609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/009/ERR10822609/ERR10822609_2.fastq.gz 3c0a97a57b604b839226215b307437d1;aa7d1ec42cd35af47d1224ff4decb2c4 5150680;4967400 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 84292 ERR10822610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/010/ERR10822610/ERR10822610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/010/ERR10822610/ERR10822610_2.fastq.gz 871af0b8acb034d9c86f6c13965507e0;3fc8ec2fcc86961a9c51d6579e35e8bf 3966685;4063682 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 99394 ERR10822611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822611/ERR10822611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822611/ERR10822611_2.fastq.gz 29d1031343b3a423252831fca0d94ff5;fb0617b5fc0889d2d4b8428fa2762554 4681708;4804891 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 119885 ERR10822612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/012/ERR10822612/ERR10822612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/012/ERR10822612/ERR10822612_2.fastq.gz 4974ea8520a9715f98f7914152bc2721;cc2de26a3d32845a1cf905c70117a4cc 5556509;5709783 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 67020 ERR10822613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822613/ERR10822613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822613/ERR10822613_2.fastq.gz 90c274f3daca69cf6ad9a6561cd5c698;ab09bffc099731f5adac8cd1bf58c3c1 3314559;3175513 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 98080 ERR10822614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/014/ERR10822614/ERR10822614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/014/ERR10822614/ERR10822614_2.fastq.gz cc42ab17363a5127fbc185b250a46b0f;885fcb6755615158ab49407971703278 4751360;4598218 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555628 RAY1028t2_Ages_2_8350_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 86588 ERR10822615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822615/ERR10822615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822615/ERR10822615_2.fastq.gz 8f786432e4908309a91a621ba704d52b;e0758f3fe044eb498527dda1a8c975f3 4127335;4257492 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr34_i62_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 802813 ERR10822280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822280/ERR10822280.fastq.gz faf088e2b818774b509b0af2599db0b5 29485348 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 963048 ERR10822281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822281/ERR10822281.fastq.gz 9e21f73075d2f96501790c57cc93815e 38409000 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr41_i70_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 911975 ERR10822282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822282/ERR10822282.fastq.gz 3edc09484cbc5c1a5efad67d4832c1ed 35246770 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr42_i71_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1040842 ERR10822283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822283/ERR10822283.fastq.gz 32f4f73ca8a03647a0450ccf42fbf868 40269846 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr43_i72_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 717308 ERR10822284 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/084/ERR10822284/ERR10822284.fastq.gz cd2e95332196495b08df7b7dcaafcca3 28917263 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr47_i76_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 660241 ERR10822285 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822285/ERR10822285.fastq.gz 3bf5c717572989befd18b9af510111d7 27339063 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr48_i77_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 580786 ERR10822286 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822286/ERR10822286.fastq.gz 429632b50f511aa32c9d618efb93293a 24078955 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr50_i79_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 608949 ERR10822287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822287/ERR10822287.fastq.gz 77d19269444bd50f42fc3d73243d4bf8 26119802 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 233724 ERR10822288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822288/ERR10822288.fastq.gz 646398eb51454e46f9e880d8a714f64d 9559955 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr52_i63_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 676164 ERR10822289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822289/ERR10822289.fastq.gz feee32510aa137239509dd88fa0efd9f 28623138 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 142905 ERR10822290 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822290/ERR10822290.fastq.gz 0d44ed07c22d0a30c93baaebaaf25168 5964873 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr34_i62_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 128714 ERR10822628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822628/ERR10822628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822628/ERR10822628_2.fastq.gz 867d7413a7124a2ad05bd893ad757615;83cf6d02940f12df4d8d77aab2577704 6016942;5631374 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 299694 ERR10822629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822629/ERR10822629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822629/ERR10822629_2.fastq.gz c2deb296eba15d1084af5a8616b22cc7;2a5aba8046e24019c8eb6e526bce99db 14565686;14085204 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr41_i70_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 241606 ERR10822630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/030/ERR10822630/ERR10822630_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/030/ERR10822630/ERR10822630_2.fastq.gz 22dff416ceb4b7237eed06393cdbfcc0;8d1f8e60630be94f068b128b9498fe03 11199983;11518934 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr42_i71_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 279774 ERR10822631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822631/ERR10822631_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822631/ERR10822631_2.fastq.gz 31c8bfeca266985e9f84a88032f475db;2f099a7682a50c3e78cc7b26440de7cb 13564515;13062541 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr43_i72_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 233058 ERR10822632 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822634/ERR10822634_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822634/ERR10822634_2.fastq.gz e4aa7e7694b30a2214412122fdb7b267;8beb904d7599fccad93776ba7c88381e 7843524;7681929 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr50_i79_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 190880 ERR10822635 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822635/ERR10822635_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/035/ERR10822635/ERR10822635_2.fastq.gz 1a19d5349664d4dc52b60aa1d32d4c2c;7672812f9e815e4fd4cf09fdbceba61d 8831311;9015190 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 62316 ERR10822636 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822645/ERR10822645_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/045/ERR10822645/ERR10822645_2.fastq.gz 4f6f83ac2b0d13d04b67dd5e85314e34;a9edf359eef45133c3b55d881fd6b938 9502047;9186100 -Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555636 RAY3030t2_Ages_2_8351_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 179384 ERR10822646 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822646/ERR10822646_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822646/ERR10822646_2.fastq.gz a79ef53e5d8f8a1df48a31da6fa9aab5;d1bc81d9815f803e9e09078e9e84c627 8338933;8665783 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 139312 ERR10822649 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822649/ERR10822649_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822649/ERR10822649_2.fastq.gz d5aa4037fb2f5ce2d2baedec82854810;361147cd049fbf389c68e64d9adc6698 3365345;3457168 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i63_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 52166 ERR10822650 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822650/ERR10822650_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822650/ERR10822650_2.fastq.gz 5db7a87212c6ec0781da20f9c9e6317b;88eaf321602d07b26c144bd62cde57d0 1171530;1246387 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 13657286 ERR10822651 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822651/ERR10822651_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822651/ERR10822651_2.fastq.gz c7a513f0f51a58fc1e9791573b02baeb;1bfb0b8ca5645ae3ae2b8f6bf0d95dd8 435005504;528081261 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 94998 ERR10822647 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/047/ERR10822647/ERR10822647_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/047/ERR10822647/ERR10822647_2.fastq.gz fbb4f7baafc929ff34c4a632e2fb3cd2;295fa604500c546d7e06ccab89351af9 2323179;2327876 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i63_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 67540 ERR10822648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822648/ERR10822648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822648/ERR10822648_2.fastq.gz 74d2d21fafbd9bda02511b9d226ca79b;fe0b40b4bb4e544d5cfae1fffc9747c4 1652072;1646372 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i63_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 209607 ERR10822302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822302/ERR10822302.fastq.gz a42920eda87c2bc263b85b433824529d 7814297 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 120178967 ERR10822303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822303/ERR10822303.fastq.gz e7fc790341bd0780a1f95fcdd07322ac 4395737940 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE WGS 594022 ERR10822301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822301/ERR10822301.fastq.gz 49bd0ebafa21ea535143f071956641f9 22227933 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 664267 ERR10822299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822299/ERR10822299.fastq.gz d039386e5f86742ddb12b711b9a0e5bb 29057225 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR8 ENA PRJEB59233 ERS5823096 LAR8t_Ages_2_6121_lr35_i63_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 434776 ERR10822300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822300/ERR10822300.fastq.gz ef80f29100a5abdf176f8b3309b6875b 19227548 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR11 ENA PRJEB59233 ERS5823072 LAR11t_Ages_2_6443_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822653/ERR10822653_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822653/ERR10822653_2.fastq.gz 96810830c8a618a465e02e3a03c5989a;7b28e6ada5ccba60a8800ba674aa6abd 4523534;4597283 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR11 ENA PRJEB59233 ERS5823072 LAR11t_Ages_2_6443_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 91093746 ERR10822306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/006/ERR10822306/ERR10822306.fastq.gz cda4ad925dd9ce3c7640794049185699 4045662614 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR11 ENA PRJEB59233 ERS5823072 LAR11t_Ages_2_6443_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2250565 ERR10822305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822305/ERR10822305.fastq.gz 565e49e41ccce0d708cb39893ddc1d1f 90081191 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR11 ENA PRJEB59233 ERS5823072 LAR11t_Ages_2_6443_lr48_i77_SN2 double 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10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS5823086 LAR27t_Ages_2_6139_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 806933 ERR10822320 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/020/ERR10822320/ERR10822320.fastq.gz f7387dabd75c1c68c9413b28386cdbf0 35807463 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS5823086 LAR27t_Ages_2_6139_lr42_i71_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 50358 ERR10822321 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822321/ERR10822321.fastq.gz e8e39357c94c3d7cf71ee8e088211b67 2205975 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555637 LAR27t2_Ages_2_9069_lr1_i1_T1Omin double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 120863 ERR10822322 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/022/ERR10822322/ERR10822322.fastq.gz 33188565af14623a3ee70fcbcfe2605e 4925162 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555637 LAR27t2_Ages_2_9069_lr4_i4_T40min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 249823 ERR10822325 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822325/ERR10822325.fastq.gz 3b91183827ddb2ca9824a4890ddd3702 10276352 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555638 LAR27t4_Ages_2_9346_lr5_i5_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 41224 ERR10822332 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822332/ERR10822332.fastq.gz 7334bddde856d9f1fc6bed1e0c7d8667 1545738 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555638 LAR27t4_Ages_2_9346_lr6_i6_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 61443 ERR10822333 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/033/ERR10822333/ERR10822333.fastq.gz 60cf2d998a4ca8fe6f4587b8fa72c110 2469972 -Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555638 LAR27t4_Ages_2_9346_lr7_i7_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 364699 ERR10822334 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/034/ERR10822334/ERR10822334.fastq.gz e9e6ffb4a8198273dddb26a9b471fef2 14870385 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr7_i7_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 26720 ERR10822699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822699/ERR10822699_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822699/ERR10822699_2.fastq.gz ffbe1c54c2c5d193941f0c26b94b4468;e0db2ad7064ee4aaf169d6e266dcd00b 665912;684824 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr9_i9_T30min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 118630 ERR10822701 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822703/ERR10822703_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822703/ERR10822703_2.fastq.gz 4c048adf074cbfe4811ed0cd71c3c0d0;cfbd04af788fc00b8b9a9a43a0cc7a14 2626929;2710820 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr12_i12_T60min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 168530 ERR10822704 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822704/ERR10822704_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/004/ERR10822704/ERR10822704_2.fastq.gz 4001e610233a94d96ca4e98a60249286;9fd2a23560d535119f9da871ec19e722 3952536;3847414 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr18_i32_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 6696 ERR10822706 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822705/ERR10822705_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/005/ERR10822705/ERR10822705_2.fastq.gz 2ee0ab28f428ddaeb99655e53a5746b9;ad81c8f56553273f964e05ea7ebda162 334684;341001 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr20_i38_T2.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 7468 ERR10822708 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/008/ERR10822708/ERR10822708_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/008/ERR10822708/ERR10822708_2.fastq.gz 066c8cba257a585517a5c9ed05dfb6fa;01f5699c23669d2c926ebeb776d8461b 185574;184552 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555652 SQ8723t_Ages_2_8659_lr7_i7_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 282884 ERR10822698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822698/ERR10822698_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822698/ERR10822698_2.fastq.gz 79130096aac14c8420f5b189149280ed;daee2c74f71d3c492430a632c1024163 7197890;7341413 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr8_i8_T20min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 82936 ERR10822700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822700/ERR10822700_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822700/ERR10822700_2.fastq.gz 54fcc4edaae7b508d9b98f8ce22cf8f2;b94d1b14c5fc886c251fca986d56cf3e 1974200;2005645 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr21_i41_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 11460 ERR10822709 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/009/ERR10822709/ERR10822709_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/009/ERR10822709/ERR10822709_2.fastq.gz 315559496385a1180fec2970b310e2ed;dc433fa962db33602ea5a8deb1415648 273193;277324 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr22_i44_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 41370 ERR10822710 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/010/ERR10822710/ERR10822710_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/010/ERR10822710/ERR10822710_2.fastq.gz 4748c40884f085e7478bd9769d67fe56;60fd264739843bbee61e584b50b8859d 976732;964247 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr23_i46_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 31194 ERR10822711 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822711/ERR10822711_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/011/ERR10822711/ERR10822711_2.fastq.gz 7c74c88fa6daf232714c4de4856acdd7;cadd6c9255ccf0b64a81b1b9ddc77f46 723680;730909 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr9_i9_T30min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 247666 ERR10822353 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822353/ERR10822353.fastq.gz 441823bf25a7098a882664614cda6547 10501056 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr21_i41_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 25693 ERR10822361 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/061/ERR10822361/ERR10822361.fastq.gz 0e71aea4594aa2a9d3778cf4cad72c24 1113536 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr7_i7_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 47831 ERR10822351 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822351/ERR10822351.fastq.gz 3e6768bf375e611601ad65282ccfb703 2172645 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr8_i8_T20min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 183924 ERR10822352 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822352/ERR10822352.fastq.gz aa037d9844f29f21530ad108da050724 7458702 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr12_i12_T60min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 277783 ERR10822356 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822356/ERR10822356.fastq.gz 064310c2bf2f5685215174851a302058 10835463 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr17_i27_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 23715 ERR10822357 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822357/ERR10822357.fastq.gz 8a15aa0aba3494c99857839304327107 1104621 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr20_i38_T2.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 19257 ERR10822360 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822360/ERR10822360.fastq.gz f4536d43e3379cbc03c780d7ecb7bfc0 811985 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555652 SQ8723t_Ages_2_8659_lr7_i7_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2948813 ERR10822350 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822350/ERR10822350.fastq.gz effa1013e28e1b397606c21414c40a00 125600370 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr10_i10_T40min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 249312 ERR10822354 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822354/ERR10822354.fastq.gz 0334132ce4fe14bdf26e740b40382da1 9664062 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr11_i11_T50min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 327011 ERR10822355 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822355/ERR10822355.fastq.gz dcd2a7884371945addef83d15538fd19 10618230 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr18_i32_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 16904 ERR10822358 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822358/ERR10822358.fastq.gz df820a8f81d78bd4e4c1c8db5cfdbd79 707951 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr19_i37_T1min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 34887 ERR10822359 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822359/ERR10822359.fastq.gz 9e9438ebc9f4ac34f1700bece38fe7e0 1387168 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr22_i44_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 119958 ERR10822362 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822362/ERR10822362.fastq.gz accfbea8ed16a7ae4d993d8edd285f92 4881607 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr23_i46_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 100636 ERR10822363 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/063/ERR10822363/ERR10822363.fastq.gz 14a80aec367710c23a55cf759a3adc32 3856783 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8833 ENA PRJEB59233 ERS14555642 SQ8833t_Ages_2_8661_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 132762 ERR10822688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822688/ERR10822688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822688/ERR10822688_2.fastq.gz 530a9b2c6364a96618e2d41b60f13136;71e089195a15dde3dff3142850ae1480 3164582;3293963 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8833 ENA PRJEB59233 ERS14555642 SQ8833t_Ages_2_8661_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 982592 ERR10822340 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822340/ERR10822340.fastq.gz d51c58587e885ae6c9bf6d75c22e1f84 37659096 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8962 ENA PRJEB59233 ERS14555651 SQ8962t_Ages_2_8664_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 119192 ERR10822697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822697/ERR10822697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822697/ERR10822697_2.fastq.gz b66d7d13d0fa54eed12e5ea31fceb088;14bfea91d45a0163f5a997e0a4dc451b 3059098;3151326 -Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8962 ENA PRJEB59233 ERS14555651 SQ8962t_Ages_2_8664_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1876918 ERR10822349 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822349/ERR10822349.fastq.gz a0c5603cf22e0520d8be016a6bd459aa 69267755 -Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547238 DSH025.A0201.YP1.1 single AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 9470273 ERR11479454 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/054/ERR11479454/ERR11479454.fastq.gz 8ab24f98f3896da32012ef63fde3403f 279725487 -Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547237 DSH008.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 18186757 ERR11479451 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/051/ERR11479451/ERR11479451.fastq.gz d8f2f2fd8d62e02ff8a716fea9d18ad1 577912772 -Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547238 DSH025.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 20942952 ERR11479453 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/053/ERR11479453/ERR11479453.fastq.gz 178729c1ff7150afcaded359e62ed960 651275896 -Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547237 DSH008.A0201.YP1.1 single AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6850253 ERR11479452 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/052/ERR11479452/ERR11479452.fastq.gz 869fdf1366e7bceba885863135667f7d 205976513 -Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547235 DSH008.A0101.SG1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE WGS 3973592 ERR11479449 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/049/ERR11479449/ERR11479449.fastq.gz 6cf53899d806b5373b9846c9cffbebc7 124500605 -Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547236 DSH025.A0101.SG1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE WGS 4901176 ERR11479450 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/050/ERR11479450/ERR11479450.fastq.gz 999057c65a6ca3edeef32cbb714645ab 143481817 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 1292846992 ERR11478695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/095/ERR11478695/ERR11478695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/095/ERR11478695/ERR11478695_2.fastq.gz f253781a551cdf2415c9381715a3bcee;a392e90f10a7b28677870ece699773f5 29915422152;31546072181 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 X3003 ENA PRJEB60595 ERS14773585 X3003T double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 20632842 ERR11011327 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/027/ERR11011327/ERR11011327_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/027/ERR11011327/ERR11011327_2.fastq.gz a4a298f0a640223c6ec99d7f3855adc2;6586c9bba9ceda8ab6359fa94980c743 467638929;445341650 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T_3 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 21145732 ERR11011329 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/029/ERR11011329/ERR11011329_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/029/ERR11011329/ERR11011329_2.fastq.gz 7642790292dc433986c6159b2d708b99;d3ca94b15ab06613149b702f45882089 471808218;493240187 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 X3003 ENA PRJEB60595 ERS14773585 X3003T_2 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 229864836 ERR11011330 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/030/ERR11011330/ERR11011330_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/030/ERR11011330/ERR11011330_2.fastq.gz 5937f8e01e4a0c32e0059cd506432f2e;23d59102b0dfb3a5722ec08dc1b5a5cc 4985082432;5107020039 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T_2 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 1329592756 ERR11435697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/097/ERR11435697/ERR11435697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/097/ERR11435697/ERR11435697_2.fastq.gz ae96523cb62dbd7cd7c27530039eff97;7617998ef105698c866d6cdedf8710ea 30549343594;29093388600 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884856 KRA004.A0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10220738 ERR11202909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/009/ERR11202909/ERR11202909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/009/ERR11202909/ERR11202909_2.fastq.gz dfa4f293ebb5a3665e42cfc1fd3b6813;25c71f69827adf0792e04c90e0a39e0e 186251653;192557211 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884856 KRA004.A0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10278910 ERR11202910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/010/ERR11202910/ERR11202910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/010/ERR11202910/ERR11202910_2.fastq.gz 64a0b23736ea265ae7d43f983e684a01;cfc866608423cfdabd08dff49baca0ee 192588589;185849366 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884857 KRA004.A0201 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9525042 ERR11202911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/011/ERR11202911/ERR11202911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/011/ERR11202911/ERR11202911_2.fastq.gz d1bd6bae76cafd5dd3ccdefa6cb6a602;66422058317bd7ecc84d03360253e523 172581354;178547024 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884859 KRA004.D0501 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 11781722 ERR11202916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/016/ERR11202916/ERR11202916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/016/ERR11202916/ERR11202916_2.fastq.gz 8fe15d0ee0994166e763dab56f269f64;fac26a4974fdb189b35ab25b9718e6c4 219062832;208390381 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884859 KRA004.D0501 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 11932510 ERR11202917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/017/ERR11202917/ERR11202917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/017/ERR11202917/ERR11202917_2.fastq.gz e1f16e6fa1bf1c8d8c3e40fdce0fcbad;cab2c5fb96d75b46fb32fea4c5ddc722 209336406;220831024 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA008 ENA PRJEB61096 ERS14884861 KRA008.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 16155308 ERR11202920 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/020/ERR11202920/ERR11202920_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/020/ERR11202920/ERR11202920_2.fastq.gz a186c93f9d24895df33ce05896881f7c;efa8f062cbfd0b49218b0cdba7986fd4 314997036;299845407 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4817486 ERR11202923 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11202923/ERR11202923_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11202923/ERR11202923_2.fastq.gz 5ddc0509ea52490bbfb75191604b5201;57abda2f3d6f24b18e0b08f4e031ba1d 100651685;118272472 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5813694 ERR11202924 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11202924/ERR11202924_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11202924/ERR11202924_2.fastq.gz 318328bd1e8a4c26445288629ba80cee;86b11b96dc3aecec24f6e13803041050 122333463;142413921 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4822034 ERR11202927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11202927/ERR11202927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11202927/ERR11202927_2.fastq.gz 2188c6d5089dabb6fb62bda975beb7a9;f0ab7022f6e86a51e177380bac19dd61 97554144;113876106 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5229444 ERR11202929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11202929/ERR11202929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11202929/ERR11202929_2.fastq.gz e042bf42a9d8c716e575da8a6b9919ab;51a96bf2d70515d26c8abd493409d4f8 123805158;106342272 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0102 double AmpliTaq Gold DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20168892 ERR11202930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11202930/ERR11202930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11202930/ERR11202930_2.fastq.gz 4802996b62a6745b28ce1112084874ea;2557b55df3094c995436d7bc102ea7ba 357560863;337901625 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0103 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31398664 ERR11202931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11202931/ERR11202931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11202931/ERR11202931_2.fastq.gz 633a97406b8e2a32ca5f349f02578f3e;65ee889b18d530411c3b45a51ca7edb4 570088672;533201421 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4901794 ERR11202933 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11202933/ERR11202933_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11202933/ERR11202933_2.fastq.gz 1041e23fd4abcb3ca2c06800078966c5;b4a56eb8ab2388977c8c84c708981803 99299217;119037391 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884860 KRA004.I0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10166410 ERR11202919 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/019/ERR11202919/ERR11202919_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/019/ERR11202919/ERR11202919_2.fastq.gz 50a949798d8f2a4b8d0432b351ec94a0;121179f99de91793d81b8b6c87a3f818 180786614;190312404 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA008 ENA PRJEB61096 ERS14884861 KRA008.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 16367442 ERR11202921 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/021/ERR11202921/ERR11202921_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/021/ERR11202921/ERR11202921_2.fastq.gz 3d620a7447e8e0aa3a5f8564ef55fd9d;150a10a5d734d5e4b3aa7a283075604c 301621921;317503967 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5580106 ERR11202922 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11202922/ERR11202922_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11202922/ERR11202922_2.fastq.gz 9b97d688ab02efe5ba894c2e69b2f302;c38dfdc16240a45115ca2d82fc6ff700 118057443;136769060 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5923318 ERR11202928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11202928/ERR11202928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11202928/ERR11202928_2.fastq.gz de3eca9832110c034a833897b95ecc50;658e4707692ca1d536b7f8b695eb308c 139295443;120721858 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5734162 ERR11202932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11202932/ERR11202932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11202932/ERR11202932_2.fastq.gz 23bb1a2481862a7dfa22ddfb231ee275;c6f2a9b909931d363501c2522f456e3e 140156519;117429698 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0102 double AmpliTaq Gold DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17264252 ERR11202936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11202936/ERR11202936_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11202936/ERR11202936_2.fastq.gz 9a7e564f725e36d55d048e9b8fbaf8f3;4e3eb2acf6d320219f798ffa47029412 282736360;301660582 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884857 KRA004.A0201 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9593292 ERR11202912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/012/ERR11202912/ERR11202912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/012/ERR11202912/ERR11202912_2.fastq.gz 8b13ee44524aea73171eeabac22a4244;45c44d646be60f81abd4f4e0a0e363eb 172516647;178987082 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 8225072 ERR11202913 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/013/ERR11202913/ERR11202913_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/013/ERR11202913/ERR11202913_2.fastq.gz b04ca2a5cbdc34f338d762dcf10e74f1;2cc3d453c555322a6a191e68168cb612 149586289;154090893 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 8340408 ERR11202914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/014/ERR11202914/ERR11202914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/014/ERR11202914/ERR11202914_2.fastq.gz 66ad3798b8f0a93203568405aef30c9e;b5c8befc203d5a49034d5c8b1719a0f9 150622009;155474803 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0302 double AmpliTaq Gold DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23086182 ERR11202915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/015/ERR11202915/ERR11202915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/015/ERR11202915/ERR11202915_2.fastq.gz 680a8b550a3eb935f0f3245e37e16a85;888db33d4a25be7baacacd11372d8755 401585432;426408297 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884860 KRA004.I0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10044766 ERR11202918 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/018/ERR11202918/ERR11202918_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/018/ERR11202918/ERR11202918_2.fastq.gz cca21dcb6a79fd970530a0cfa2429cce;f8ae6a472c6f076e47c20965ba8d26a2 188681451;179715537 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5161998 ERR11202925 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11202925/ERR11202925_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11202925/ERR11202925_2.fastq.gz 8619517b6de3709e88cbbe9e8e50192e;f97297c0a7ce2d87643368ac90e78dd4 127335086;108534718 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5716674 ERR11202926 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11202926/ERR11202926_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11202926/ERR11202926_2.fastq.gz 0cd40fe89cc869ddb2abfef323a49c5a;7286534a69435dd12a642bbdfcfe1240 134241252;116675406 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6030024 ERR11202934 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11202934/ERR11202934_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11202934/ERR11202934_2.fastq.gz bc9ffa7506e877e24d48891704beaeb0;1cd0889ea74a340d4056c3422b5dd980 123130992;147880558 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5244376 ERR11202935 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11202935/ERR11202935_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11202935/ERR11202935_2.fastq.gz f4840469f8ec92960ddda12074bf49d1;86f321239eaf4c1c3b8743dab4d5b5cc 107055111;128528088 -Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0103 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 34240226 ERR11202937 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11202937/ERR11202937_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11202937/ERR11202937_2.fastq.gz 360f8370041b6558afd149593a6a8595;da02c63d5f55963d7ae9c6ab6ea15402 553924381;611677182 -Long2023 2023 10.1371/journal.ppat.1011538 Sante Brancorsini SRA PRJNA966239 SRS17532534 LMN01_S415 single AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 26874306 SRR24420453 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/053/SRR24420453/SRR24420453_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/053/SRR24420453/SRR24420453_2.fastq.gz d7b8d3754d7633e119f0a2769bd821a1;917b0e2ee6ad1bf51904061e7ab8d597 673258837;673103704 -Long2023 2023 10.1371/journal.ppat.1011538 Sante Brancorsini SRA PRJNA966239 SRS17532534 LMN01_S301 single AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 1731099 SRR24420454 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/054/SRR24420454/SRR24420454_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/054/SRR24420454/SRR24420454_2.fastq.gz 7d67f4001c48a53702e280edb68ddde1;e87eeebc190579aa3323845513e5128b 45760293;45221147 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1845 SRA PRJNA883598 SRS15248955 HERB_1845 double Unknown none NextSeq 500 SINGLE WGS 26083266 SRR21711661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/061/SRR21721661/SRR21721661.fastq.gz d0a79e7827ddb73b6220ce2a23e40714 701255405 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1852 SRA PRJNA883598 SRS15248956 HERB_1852 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 8020338 SRR21721660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/060/SRR21721660/SRR21721660.fastq.gz 4e97e0303fbaa346d262e664f8ecd70b 274357796 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1854 SRA PRJNA883598 SRS15248959 HERB_1854 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 6440966 SRR21721657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/057/SRR21721657/SRR21721657.fastq.gz f4fc3e5526d10841f8500f58ae96651e 230281895 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1859 SRA PRJNA883598 SRS15248960 HERB_1859 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 4752661 SRR21721656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/056/SRR21721656/SRR21721656.fastq.gz 2bc6b7b859331adf3e7b0b0f5fbdd59b 168302503 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1865 SRA PRJNA883598 SRS15248961 HERB_1865 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 3912063 SRR21721655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/055/SRR21721655/SRR21721655.fastq.gz 9e1715dfdd60db43bcae63e0861b11c9 151676612 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1884 SRA PRJNA883598 SRS15248962 HERB_1884 double Unknown none NextSeq 500 SINGLE WGS 14920382 SRR21721654 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/054/SRR21721654/SRR21721654.fastq.gz a63d5b897aafe3754063bdccf8789491 366477920 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1911 SRA PRJNA883598 SRS15248963 HERB_1911 double Unknown none NextSeq 500 SINGLE WGS 5972972 SRR21721653 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/053/SRR21721653/SRR21721653.fastq.gz e5e1b9df9f3e3a369859cc8d63474a52 195756499 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1915 SRA PRJNA883598 SRS15248964 HERB_1915 double Unknown none NextSeq 500 SINGLE WGS 7151544 SRR21721652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/052/SRR21721652/SRR21721652.fastq.gz 892f78532e8e0924aa7fe9a3bff88656 178713143 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1922 SRA PRJNA883598 SRS15248965 HERB_1922 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 17855646 SRR21721651 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/051/SRR21721651/SRR21721651.fastq.gz 154590670a30d3ee14af1d2c0dfdc7fa 583308323 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1946 SRA PRJNA883598 SRS15248966 HERB_1946 double Unknown none NextSeq 500 SINGLE WGS 10729826 SRR21721650 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/050/SRR21721650/SRR21721650.fastq.gz f31a22f48c35afdba9cfbd2d6f87dd73 311169565 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1963 SRA PRJNA883598 SRS15248957 HERB_1963 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 4107994 SRR21721659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/059/SRR21721659/SRR21721659.fastq.gz 718980e28d0c4dc91bd52d1efbc9f70a 139054986 -Campos2023 2023 10.1038/s41467-023-39950-z HERB_1974 SRA PRJNA883598 SRS15248958 HERB_1974 double Unknown none NextSeq 500 SINGLE WGS 9256767 SRR21721658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/058/SRR21721658/SRR21721658.fastq.gz e4530fe1bb2ee93f38c728edf4283d3c 199004045 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_001_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 32567057 DRR046399 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046399/DRR046399.fastq.gz 59098fe5c2d339f49a29f62bb581df0d 3031799168 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_004_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 22029742 DRR046405 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046405/DRR046405.fastq.gz 73f76a8c76f4548200740792cec3e80f 1480013579 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_mtDNA_Capture_R1 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 135268 DRR046406 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046406/DRR046406.fastq.gz 37c506c70b5f4384eac3daf49bbf1806 13168706 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_mtDNA_Capture_R2 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 135268 DRR046407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046407/DRR046407.fastq.gz b08daf33376d9b8769638c68ef9e1624 14586872 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_index16_R1 double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 356354850 DRR046408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046408/DRR046408.fastq.gz 792187bcc4f5a0837c33bfa9bcd45ff7 25135887359 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_mtDNA_Capture_R2 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 77847 DRR046411 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046411/DRR046411.fastq.gz a185e6ef0736d5798b73d57eade9aefe 8570877 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_003_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 25994286 DRR046402 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046402/DRR046402.fastq.gz 251cfd9c110f0c258b92986757c5e08e 2236884763 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_001_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 32567057 DRR046398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046398/DRR046398.fastq.gz dd07acfd074d7ab3de3a737a11a02bbf 2923006982 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_002_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 31133080 DRR046400 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046400/DRR046400.fastq.gz 9baaa4283c72e838b97cec348101b1e6 2739068719 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_002_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 31133080 DRR046401 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046401/DRR046401.fastq.gz 2c7dd699fe0ed1044b150de785c8ac16 2864519935 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_003_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 25994286 DRR046403 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046403/DRR046403.fastq.gz 05f383ec42a1d9c5d73e15c91b867904 2312625893 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_004_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 22029742 DRR046404 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046404/DRR046404.fastq.gz 4589fb0baa96aee3f653d2e6de17e5fd 1438715827 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_index16_R2 double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 356354850 DRR046409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046409/DRR046409.fastq.gz c66e84985b2b86e506713a055303f3fc 25985687100 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_mtDNA_Capture_R1 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 77847 DRR046410 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046410/DRR046410.fastq.gz 374b027632e96e155944a5ffff376fc3 7809572 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 163 ERR1937826 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/006/ERR1937826/ERR1937826.fastq.gz 4028690b02008c7d6934e4a399a3c324 8498 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 76673447 ERR1937833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/003/ERR1937833/ERR1937833_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/003/ERR1937833/ERR1937833_2.fastq.gz 9f5d8938ecfab81ff4b06cf5b85ecd84;9b0a31ebf902f6749b3d2bb66fe98583 3888369913;4105585278 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 5422 ERR1937825 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937825/ERR1937825.fastq.gz a0b9ad0f50ea8d3e84968e1a6b48a34f 196674 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE WGS 21 ERR1937828 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/008/ERR1937828/ERR1937828.fastq.gz 0853f9b447d7b2d3ea74c10e8e7b698a 882 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 52435610 ERR1937834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/004/ERR1937834/ERR1937834_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/004/ERR1937834/ERR1937834_2.fastq.gz 8bdc8dc708983ac9334f59ff5d3bca09;9b02c90be8f45c0a9bdcb138459bdd64 2172525415;2376886625 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE WGS 20404 ERR1937827 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/007/ERR1937827/ERR1937827.fastq.gz 6413c8cb99df1ce1762913cadf28329c 537498 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 44375613 ERR1937835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937835/ERR1937835_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937835/ERR1937835_2.fastq.gz 227dbeb7889d5b4e2f5188c56d079576;d0d9ee382a5ad825a4431ebfad77ba9f 2421609326;2479467479 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 807 ERR1942918 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR194/008/ERR1942918/ERR1942918.fastq.gz 8c002eac0175550cd4e5fd966261b50c 26359 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 318125040 ERR2112574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112574/ERR2112574.fastq.gz d29e8511b8c860889920240560f28963 11592228429 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320155752 ERR2112575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112575/ERR2112575.fastq.gz 1c3931ef9c7b3198fd89eed4c4af79aa 11523747356 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320577112 ERR2112576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112576/ERR2112576.fastq.gz c01e8e624b5e7e542a6a53060eda2963 11612997118 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 286756923 ERR2112577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112577/ERR2112577.fastq.gz 1b43fd6bdd9e0f372e0370426e502ae9 10175356811 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 165092355 ERR2112578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112578/ERR2112578.fastq.gz a546c8d02e34ab7ba9bf9b9b70edc110 6042098938 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-004-Tooth ENA PRJEB86458 ERS1906198 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 32788454 ERR2111944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2111944/ERR2111944.fastq.gz 2268b27c14ddaa9fe8ba1994dca180b7 1476338852 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 83657790 ERR2111947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2111947/ERR2111947.fastq.gz 28d80ed137a4f2749c8df338f1396296 4616384352 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 84678681 ERR2111948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2111948/ERR2111948.fastq.gz 2670f6ee30cdb2e9cf25194b1d00352f 4487414231 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 41600057 ERR2111950 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2111950/ERR2111950.fastq.gz 7d2f61ffbc3704b514b1ad49c83cc2ea 2283826200 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42454995 ERR2111951 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2111951/ERR2111951.fastq.gz 166f95e2b9def23d98644c5c37f39841 2239935032 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 46432244 ERR2112075 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112075/ERR2112075.fastq.gz c3058a6ab2a74162e841055c2c9871e7 3315636400 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 41968696 ERR2112076 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112076/ERR2112076.fastq.gz c1f0637d92139b565497ff8eb58dc708 3024212774 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42694502 ERR2112077 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112077/ERR2112077.fastq.gz 527ea4fcb4e247423862d8d65850297f 2971810358 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 56519202 ERR2112078 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112078/ERR2112078.fastq.gz 746c40aa7f5364b424a8a010625ab555 4015798460 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 103034192 ERR2112082 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112082/ERR2112082.fastq.gz b494900e3eb4faa8fc519510c3d18044 4339155003 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 48006465 ERR2112095 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112095/ERR2112095.fastq.gz aa23291e1ffa281f02cb00424cabca88 2904018843 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 46090647 ERR2112097 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112097/ERR2112097.fastq.gz a3bc3849f6ae72755564f0639badf10b 2763637774 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 34599863 ERR2111945 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2111945/ERR2111945.fastq.gz be2c0610c72a60232d3d2ceacfc45c15 1531332605 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 43607924 ERR2111949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2111949/ERR2111949.fastq.gz c12312b0e05b7364e4ae34ff58dbed2b 2330733778 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 48025167 ERR2112074 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112074/ERR2112074.fastq.gz 56b44ec8a3f4a84f0e6e52f23a45244f 2650703816 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 51462140 ERR2112079 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112079/ERR2112079.fastq.gz cb086c299d3dd88bea8b8497712d2f23 3674875735 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 52674925 ERR2112080 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112080/ERR2112080.fastq.gz 444cfc9e7f1312e42f812bf1e0437f8b 3656995820 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 247085213 ERR2112083 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112083/ERR2112083.fastq.gz 5e871b7f274fd4045af8ca7a99ba6fb1 12125066589 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 156625959 ERR2112084 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112084/ERR2112084.fastq.gz 1f89e2c52b4811dfcc047ed1ee608b7e 7764413478 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 95745866 ERR2112093 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112093/ERR2112093.fastq.gz 7bd19b4ef5a6ac548a04fe4e67afc7cc 6033829981 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 97073096 ERR2112094 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112094/ERR2112094.fastq.gz 3d7cae0f6e17f95675644668c8b58c43 5838900641 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 30451552 ERR2185281 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/001/ERR2185281/ERR2185281.fastq.gz ab6526f8ff7e7706029265c64df6ffac 1188674769 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 28674836 ERR2185284 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/004/ERR2185284/ERR2185284.fastq.gz 25cd96b8767c4435b1fa287ffa9a57d9 1206388101 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 86740492 ERR2111946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2111946/ERR2111946.fastq.gz 810b089d785ebd1edbad3a41226ce5ad 4637501739 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 50136895 ERR2112081 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112081/ERR2112081.fastq.gz 154863c74e9827eb9fee2b3a630ac19e 2230636146 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 37810056 ERR2112091 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112091/ERR2112091.fastq.gz 9d9ff02519fdb933fe98adbac42996b3 1904292211 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 101242754 ERR2112092 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112092/ERR2112092.fastq.gz b40662014d1863d723646aecec72da1b 6139469451 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 44839252 ERR2112096 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112096/ERR2112096.fastq.gz a0e40d36ccb46a36986b6396ccbdef39 2801279215 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-013-Tooth ENA PRJEB86458 ERS1906204 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42367542 ERR2112098 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112098/ERR2112098.fastq.gz 405950db4d2dd6088e452d76e574ed6b 2206630410 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 16219915 ERR2185282 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/002/ERR2185282/ERR2185282.fastq.gz ae8291e6f7c8dc421db1c5969b9230e3 681016439 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 187683798 ERR2185283 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/003/ERR2185283/ERR2185283.fastq.gz 96d19ed679b9b9a6c5b601fe840f571e 6382804778 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 861998 ERR2204611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_2.fastq.gz e97363c161e90082e6eb8fa53a3b8a58;939c0a52c40cec8b8cefdb38851435ba 39871514;41647617 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 28118462 ERR2204612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_2.fastq.gz ddfc21cae3d74b9d1c80f06f8115a71b;2b337c73947e90b37b4006bfed0e3fb5 1144496374;1271866282 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2863375 ERR2204613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_2.fastq.gz c3c2cd5a50992713d7ed50f5b91dd97b;eb94f2bba3435db0075a3b6fda474505 131797035;136207848 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 96106710 ERR2204614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_2.fastq.gz cdcbb32ff04e32423a6d04609a70870e;f010594dfbd557e727f45ed8fd262db3 3851279631;4247569192 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 994328 ERR2204644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_2.fastq.gz 73d0b651d0d03c55e2dddbe75d77dd9d;0c02751f3c5e30e5c43e352edc178964 73031399;75636413 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva_de_los_Lagos-Tooth ENA PRJEB23467 ERS2059523 unspecified double Phusion Hot Start High-Fidelity DNA none HiSeq X Ten SINGLE Unknown 179251988 ERR2224078 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/008/ERR2224078/ERR2224078.fastq.gz 245587cc316cb175e2eed76a5907d42e 5551553388 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva_de_los_Lagos-Tooth ENA PRJEB23467 ERS2059523 unspecified double Phusion Hot Start High-Fidelity DNA none HiSeq X Ten SINGLE Unknown 1164531241 ERR2225784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/004/ERR2225784/ERR2225784.fastq.gz d028912fb20f3a5c731406ad82d2e363 48849563848 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Yámana-Tooth ENA PRJEB24629 ERS2160137 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 SINGLE WGS 808299942 ERR2270785 fastq_all ftp://ftp.sra.ebi.ac.uk/vol1/run/ERR227/ERR2270785/IPY10.All.fastq.gz 3c32116386822aa24ff2efa67e5d2e94 45202276574 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Vác-Mummy-Tissue ENA PRJEB7454 ERS563409 92-A1 double Unknown none Illumina MiSeq PAIRED WGS 20084713 ERR651004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_2.fastq.gz 3f07d29738185963f380f637b9b93065;0d96c823b7998af0b2165fe46b7e542e 2984512816;3476815638 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_10 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 75660984 ERR966295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966295/ERR966295.fastq.gz 3f43def0d896afea489f3c5fccea36c3 3930297733 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_11 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 103486178 ERR966296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966296/ERR966296.fastq.gz b514bc662c122adb6ac42d5acf3b05f0 5330914571 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_13 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 285814147 ERR966298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966298/ERR966298.fastq.gz dc75bf256f29ebbd70954d7bd7ab2c9a 16162263061 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_6 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 30343646 ERR966310 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966310/ERR966310.fastq.gz 6efffec6ad1d62ed52e2cc3d3c5a7f43 1416897788 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_8 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 87962797 ERR966312 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966312/ERR966312.fastq.gz 5ceca13c5c30374209d7ea44e40de87c 4175899212 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_12 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 107286297 ERR966297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966297/ERR966297.fastq.gz ec6261bc595a0d84a6606143492f91ec 5571578708 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_15 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 40472562 ERR966300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966300/ERR966300.fastq.gz 600dc595ac8de4fe232ca1c00c456fec 2368473624 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_17 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 86611474 ERR966302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966302/ERR966302.fastq.gz 1d2c52049d8c8302e8d45b83c2ce7f4f 5140536631 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_2 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 58022324 ERR966305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966305/ERR966305.fastq.gz 9350277d1aafa8c43cec850f9e38f0e1 2756025719 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_20 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 136573362 ERR966306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966306/ERR966306.fastq.gz 98688aecf3d8b0969298d39010220e23 6672345221 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_3 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49940208 ERR966307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966307/ERR966307.fastq.gz ff03f2f79b3c528eb1c98af05a3fad62 2423386088 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_4 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 26872695 ERR966308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966308/ERR966308.fastq.gz 2557624cd4bd5e82ac3e32fc8fa4ed85 1254939750 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_7 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 94822961 ERR966311 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966311/ERR966311.fastq.gz 871dbd8cd245d22c9cdabc166b9118e5 4496790226 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_1 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49502893 ERR966294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966294/ERR966294.fastq.gz a808f03060305f2523287cf004fa29fc 2350014565 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_14 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 23206451 ERR966299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966299/ERR966299.fastq.gz 4139f9e28a3f01f79f1e8fc6163342ef 1361039728 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_16 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 25867706 ERR966301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966301/ERR966301.fastq.gz 142744b3e9bb59d960fb7959e5cadd24 1522488144 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_18 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 100755898 ERR966303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966303/ERR966303.fastq.gz 66be0bbef7e8660498b971e19236b005 5975543012 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_19 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 85601752 ERR966304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966304/ERR966304.fastq.gz 2377b397bc7659809ba3a3b58c9abdda 5175038658 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_5 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 47945651 ERR966309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966309/ERR966309.fastq.gz d27e80a6d72a4e6c366a4481847639df 2206834714 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_9 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 98694708 ERR966313 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966313/ERR966313.fastq.gz 9cfcbea3b01094ef1ab7b0bd30f84c5a 4681565044 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 11472673 ERR966440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966440/ERR966440.fastq.gz 28855b18583116ffa22e1f40fd963278 694295918 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libCAGCTA.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 50343799 ERR966426 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966426/ERR966426.fastq.gz 88d4a682975953ad845683f12590a1d3 2888163703 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 3444716 ERR966430 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966430/ERR966430.fastq.gz 075f7fe98e6ec5cde875bf670cb49c47 201382661 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Marseille-Tooth ENA PRJEB12163 ERS1020860 OBS107_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 14646710 ERR1193532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_2.fastq.gz 884a4afc0b75b86bbb323f58b80a041c;9e5e2bca98fdf7b541b490f5955a9ad3 1149013961;1150891719 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Marseille-Tooth ENA PRJEB12163 ERS1020860 OBS107 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 851096 ERR1193537 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/007/ERR1193537/ERR1193537.fastq.gz 864da17f8807ceecad7368caf2c92997 39236628 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Barcelona-3031-Tooth ENA PRJEB13664 ERS1124787 Barcelona3031 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 61845279 ERR1368878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_2.fastq.gz 095af025dc7f11f79502974aa75e7386;4130f9ec25f3df279f8142845961aadb 4422361795;4446780768 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 SLC-France-Tooth ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 203877595 ERR2862150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_2.fastq.gz a6112d04b304b2375dae6c34033bbc16;acafcc79f3d021db8f3308d9ac935bcf 11059312752;11017819383 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 SLC-France-Tooth ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 221791489 ERR2862151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_2.fastq.gz f80f8e1d0712e6c0f2a65e79acc67ba3;190cc46629e5eda6fef664d6cb80ee3d 11578595157;11538874156 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karolva-Tooth ENA PRJEB32786 ERS3568107 unspecified single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE Unknown 1140330766 ERR3426230 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR342/000/ERR3426230/ERR3426230.fastq.gz a132e833c23eea070bcaacf5ec544fc4 52616619455 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karolva-Tooth ENA PRJEB32786 ERS3568107 unspecified single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE Unknown 171457258 ERR3426214 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR342/004/ERR3426214/ERR3426214.fastq.gz b8738de2667671d5a178a72cadfee9c0 5737682401 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1595-Tooth ENA PRJEB33848 ERS3635963 Abusir1595t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1752726 ERR4374869 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4374869/ERR4374869_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4374869/ERR4374869_2.fastq.gz ae15532ee7d7f77e66e514c3aba99136;7a90231a56f5b797c3b57343139ff922 123648672;117691019 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1671-Tooth ENA PRJEB33848 ERS3636004 Abusir1671t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1782693 ERR4375141 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4375141/ERR4375141_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4375141/ERR4375141_2.fastq.gz 5ae99bc0ce03b22aff0d9850f1fde5d3;175c717414a955be4cf03ec799d76262 125757629;120330029 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1607-Tooth ENA PRJEB33848 ERS3636032 Abusir1607t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1586988 ERR4374914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4374914/ERR4374914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4374914/ERR4374914_2.fastq.gz 1d77a89866d7447f45292a4dec6658a4;55da618b78bfecc4baa4584293980eb2 110209867;107590188 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1655-Tooth ENA PRJEB33848 ERS3635957 Abusir1655t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1945335 ERR4375049 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4375049/ERR4375049_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4375049/ERR4375049_2.fastq.gz f22d9971ef57fe9e47700a8c7457a588;688449cd8b334879880e9020e1ec45e9 131666971;121340094 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1668-Tooth ENA PRJEB33848 ERS3635986 Abusir1668b double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1541347 ERR4375136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/006/ERR4375136/ERR4375136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/006/ERR4375136/ERR4375136_2.fastq.gz effef5dfd1a98d96b9e3fe315f3571f1;998c0eb27a55a32b6fe0c9414bfffa84 100349234;96655523 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1668-Tooth ENA PRJEB33848 ERS3636003 Abusir1668t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1713268 ERR4375137 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/007/ERR4375137/ERR4375137_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/007/ERR4375137/ERR4375137_2.fastq.gz e0c16b10c7223f0f06dc877b967efade;159f44266cd022b79bcba198793b4426 118529958;117196832 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten PAIRED WGS 526840783 ERR3828670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/000/ERR3828670/ERR3828670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/000/ERR3828670/ERR3828670_2.fastq.gz 8bb30abf98faae0b4e32879e73d0fddb;2c14f5f656437db800c7d440b43118ec 32454725484;34339312668 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten PAIRED WGS 28036224 ERR6504159 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/009/ERR6504159/ERR6504159.fastq.gz 17a0ca6e5e6bf71c9baf67a3469c9667 1215957980 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten SINGLE WGS 26132707 ERR3828725 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3828725/ERR3828725.fastq.gz bdbd5c57583dd407cfb4fd238f65a64e 1141752081 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga_Cemetery-Tooth ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 191158993 ERR3841646 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/006/ERR3841646/ERR3841646.fastq.gz ad40e5810f4cade26206881f064d781a 8028301308 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga_Cemetery-Tooth ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 7930905 ERR3841647 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/007/ERR3841647/ERR3841647.fastq.gz 59264a85b271b4cc44ece2e409ed6257 329376589 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC12-12-Tooth ENA PRJEB37726 ERS4421181 SC79-L1101 single Unknown half-udg HiSeq X Ten PAIRED WGS 285113997 ERR4017942 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/002/ERR4017942/ERR4017942_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/002/ERR4017942/ERR4017942_2.fastq.gz 818b384816f44c7b1879294fd37bd299;0d2e65636f7a46edf753df2e68dd8a5b 18195979831;21200990407 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC12-24-Tooth ENA PRJEB37726 ERS4421183 SC79-L1096 single Unknown half-udg HiSeq X Ten PAIRED WGS 283637918 ERR4017944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/004/ERR4017944/ERR4017944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/004/ERR4017944/ERR4017944_2.fastq.gz 8c7a2105a5d34c1160ea68cc6c459a7f;9365adbf8f8538a7a63631f1b3e56bda 18392091676;21164798356 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC8-8168-Tooth ENA PRJEB37726 ERS4421185 SC79-L1099 single Unknown half-udg HiSeq X Ten PAIRED WGS 255728754 ERR4017946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/006/ERR4017946/ERR4017946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/006/ERR4017946/ERR4017946_2.fastq.gz c931ada4db74d678bc82e71dad544556;e648c62aaad77dd722f482cfd6f68d0e 16428825487;18295596682 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 El_Yaral-Bone SRA PRJNA244165 SRS592075 sample_64 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 50916301 SRR1238559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_2.fastq.gz f62e1e3dd90fb7fd0324e920f15ab8bd;b635c5da56ca1b3dd185678c9f9df508 3713855268;3742735134 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chiribaya_Alta-Bone SRA PRJNA244165 SRS591994 sample_54 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 80406577 SRR1238558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_2.fastq.gz 72ade0f81eed372eae9fb927a484aa44;5f1fa7e6729773322b52903151f03192 5821824690;5839496681 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA40-Bone SRA PRJNA246597 SRS620293 NA40 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED WGS 12285216 SRR1298750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/000/SRR1298750/SRR1298750_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/000/SRR1298750/SRR1298750_2.fastq.gz 0a15035340b0c7035d3bb909880b7b0e;0922a0583a8f80ec1508ad759179176f 986232779;962732023 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA42-Bone SRA PRJNA246597 SRS620295 NA42 double Platinum Taq DNA-Polymerase High Fidelity full-udg Illumina HiSeq 2500 PAIRED WGS 8330163 SRR1298752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/002/SRR1298752/SRR1298752_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/002/SRR1298752/SRR1298752_2.fastq.gz 11a8d69baa09d592a540b098a730f291;f2b6407d15e52c48950109f9a0433450 682701697;664051670 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA42-Bone SRA PRJNA246597 SRS620295 NA42 double Platinum Taq DNA-Polymerase High Fidelity full-udg Illumina HiSeq 2500 PAIRED WGS 18730377 SRR1314214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/004/SRR1314214/SRR1314214_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/004/SRR1314214/SRR1314214_2.fastq.gz d251b55d54eba0b090678c137b7db1a2;3f080f16f1ad832a0a19b532e0f3461f 1571141325;1542055871 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA40-Bone SRA PRJNA246597 SRS620293 NA40 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED WGS 22453782 SRR1314212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/002/SRR1314212/SRR1314212_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/002/SRR1314212/SRR1314212_2.fastq.gz 2d98d878adca254a59847145e4714b3e;25bf14d82da531b60a3ca430b90877f4 1871792459;1847705551 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_seperated1 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 5673426 SRR5169886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/006/SRR5169886/SRR5169886_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/006/SRR5169886/SRR5169886_2.fastq.gz 990dd87c0889dfb683b63a81547e18ff;9920fbe01c61b92ba8b7c655dda5e6ea 371088934;370621153 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_merged2 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 11699427 SRR5169887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/007/SRR5169887/SRR5169887.fastq.gz 0554a6c3520470fed11f5859dcf6ff60 654473091 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_BAM double Platinum Taq DNA-Polymerase High Fidelity none NextSeq 500 PAIRED Unknown 850652 SRR5182352 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR518/002/SRR5182352/SRR5182352.fastq.gz cacc950730273faf12248a8cf993d847 22154218 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_merged1 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 5047103 SRR5169885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/005/SRR5169885/SRR5169885.fastq.gz e738d5fc9710f7d66bbd52398aef88ee 303750743 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_seperated2 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 14110398 SRR5169888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/008/SRR5169888/SRR5169888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/008/SRR5169888/SRR5169888_2.fastq.gz dbb0c55e9c1da142301d4bdca8dde663;d17973f6ff1784e11a00e13cb9963253 918308388;927811702 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gniezno-Tooth SRA PRJNA354503 SRS1815300 PCA0162 single Phusion Hot Start High-Fidelity DNA none Illumina Genome Analyzer II SINGLE WGS 6594634 SRR5047069 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR504/009/SRR5047069/SRR5047069.fastq.gz 6df299e1a545cb4a7af8bccc6645696f 441544945 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Punta_Candelero-Tooth SRA PRJNA557308 SRS5212084 PC-119-WGE double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 13553081 SRR9898505 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR989/005/SRR9898505/SRR9898505.fastq.gz 5337cb2a6102a497dda11a6381238cb6 567421190 -Majander2024 2024 10.1038/s41586-023-06965-x ZH1541 ENA PRJEB62647 ERS15463028 ZH1541 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 99718186 ERR11483916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/016/ERR11483916/ERR11483916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/016/ERR11483916/ERR11483916_2.fastq.gz 591b393910a76fa0ef87a2857fad02fa;6d634bfb10fa7c7d8d8faa13d469157c 2025791855;2093301951 -Majander2024 2024 10.1038/s41586-023-06965-x ZH1557 ENA PRJEB62647 ERS15463030 ZH1557 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 88468522 ERR11483914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/014/ERR11483914/ERR11483914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/014/ERR11483914/ERR11483914_2.fastq.gz 32c7660a773aadc73bd202f4f0cd2831;75894201318f62ffbff2dbda1ff3cbca 1861701209;1936704663 -Majander2024 2024 10.1038/s41586-023-06965-x ZH1390 ENA PRJEB62647 ERS15463029 ZH1390 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 23585502 ERR11483915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/015/ERR11483915/ERR11483915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/015/ERR11483915/ERR11483915_2.fastq.gz 6eaabb4849154148d5e876bf0bf6349c;02f0635ede3c7eca60d800459736e3da 502526894;473323928 -Majander2024 2024 10.1038/s41586-023-06965-x ZH1540 ENA PRJEB62647 ERS15463027 ZH1540 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 20252894 ERR11483917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/017/ERR11483917/ERR11483917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/017/ERR11483917/ERR11483917_2.fastq.gz 214df0376a6ee084099b8f7356baa8fb;c3a241e2a911c6b672eb2ee21e374b02 436283340;449480697 -Rozwalak2024 2024 10.1038/s41467-023-44370-0 Zape3 GenBank PRJNA561510 BK063464 Zape3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS NA BK063464.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/BK063464.1 6e89d2506d7f411168a32546fb9d293d 37316 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-62-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32863597 ERR11660464 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/064/ERR11660464/ERR11660464.fastq.gz 9ed986c9657701718dcc576a4dc43965 2502706005 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-65-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32531149 ERR11660466 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/066/ERR11660466/ERR11660466.fastq.gz 422754336dedfa4ec80b3bf6282de8a7 2385234327 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-143_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 917938 ERR11660430 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/030/ERR11660430/ERR11660430_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/030/ERR11660430/ERR11660430_2.fastq.gz 96a2efac1e1b9ce05f916df6e54dec9d;c82a0333f304e038c8eb5e4811f2382b 25671678;24437025 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-95_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 184046 ERR11660432 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/032/ERR11660432/ERR11660432_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/032/ERR11660432/ERR11660432_2.fastq.gz 0f9192779ed5feba7f329d42e3cf1c8e;f6c7f2c68546cc9c6fd185291f972e1e 4830460;5108568 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-20-PCR2-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32142506 ERR11660461 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/061/ERR11660461/ERR11660461.fastq.gz d5c66ba45e4dae40c1bd2e663908a747 2362843719 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-38-PCR2-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 33934341 ERR11660462 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/062/ERR11660462/ERR11660462.fastq.gz 2026e4973e8a7e367805aec1672da6e7 2488557649 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-64-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 28637756 ERR11660465 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/065/ERR11660465/ERR11660465.fastq.gz 5baf93ea4f279072e3f0d44e0f5980c9 2169685309 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1.forsythia double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 221487 ERR11658336 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/036/ERR11658336/ERR11658336.fastq.gz a9c1c872e5a8b54a9b136b18ddbb2dd3 7896761 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-94_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1119516 ERR11660431 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/031/ERR11660431/ERR11660431_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/031/ERR11660431/ERR11660431_2.fastq.gz e99fd3e4ff55970048a320e75a88ff27;e874487f345a12e35afe886a998260c1 31350760;29310998 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-LIB1-71-PCR1-Mi09 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 1114567 ERR11660460 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/060/ERR11660460/ERR11660460.fastq.gz d3ca9d0846ebd58049c3f291e4cd4fc7 57414096 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-42-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 30014392 ERR11660463 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/063/ERR11660463/ERR11660463.fastq.gz debcd720461fe720765ac2815e9bfde3 2269019544 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX1-LIB1-53-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 317102 ERR11660451 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/051/ERR11660451/ERR11660451.fastq.gz 8e7282bb78e8c4087d67258d8b96b811 16721393 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-24-PCR2-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 39319672 ERR11660456 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/056/ERR11660456/ERR11660456.fastq.gz 712c8c61322a62203d3dc31a8de8d595 2931624690 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-25-PCR3-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 33535041 ERR11660457 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/057/ERR11660457/ERR11660457.fastq.gz 3b294f3e8abed23e0fb1a619211b1f1d 2507060016 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-Hi4.mutans double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 3493602 ERR11658334 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/034/ERR11658334/ERR11658334.fastq.gz 7deaa96d038b2e8e1c1cbdf125dc903a 139876792 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX2-LIB1-57-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 443501 ERR11660453 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/053/ERR11660453/ERR11660453.fastq.gz d91aa67d3c80db97e520115cf8075ffe 22940125 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-26-PCR1-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32567767 ERR11660458 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/058/ERR11660458/ERR11660458.fastq.gz 90832793c9d0500911806db7beac6b14 2427469246 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX1-LIB1-53-PCR3-Mi06 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 794689 ERR11660452 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/052/ERR11660452/ERR11660452.fastq.gz 9731a2510596b75d4164ea64cce32ff6 41743196 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX2-LIB1-57-PCR3-Mi06 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 1427678 ERR11660454 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/054/ERR11660454/ERR11660454.fastq.gz 1e0d78a67386d4cbf76d5973f3833df5 73360473 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-LIB1-41-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 168845 ERR11660455 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/055/ERR11660455/ERR11660455.fastq.gz e82b30b08242332fcaf36d6640b4cc0d 8915818 -Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-27-PCR3-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 26740396 ERR11660459 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/059/ERR11660459/ERR11660459.fastq.gz a6b6e30f5ae051e9ba290b187061e8b8 1991905325 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1.forsythia double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 841339 ERR11658335 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335_2.fastq.gz 2dcd1c6118c2a5a91ad32e02d8387bf3;ba697edc60ca5ccc3f8983a54142251d;297b106e886675b36c804f65066ee9c3 17115189;1558991;1587960 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-71_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12001112 ERR11660400 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/000/ERR11660400/ERR11660400_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/000/ERR11660400/ERR11660400_2.fastq.gz a4e7dc0c73ec4b136e186152f41fcc0c;b5a62fcfef7ddf10f1117c13d40492f5 195396449;191847862 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-71_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1250556 ERR11660401 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/001/ERR11660401/ERR11660401_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/001/ERR11660401/ERR11660401_2.fastq.gz 44cd455c9a804c3e59aeb23b2a773a62;8f99d15e040de5d7e95dbd48a1f7ffc2 34620502;33374527 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-76_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12044670 ERR11660411 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/011/ERR11660411/ERR11660411_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/011/ERR11660411/ERR11660411_2.fastq.gz 9eda78dcb6d7033d9c4cdbc5228be3fd;377cb489af3fe8c5ebffd409ed4092b4 197271541;192422500 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-76_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12038962 ERR11660412 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/012/ERR11660412/ERR11660412_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/012/ERR11660412/ERR11660412_2.fastq.gz 6d1a6fa7200d2c97044703d5927a000f;81ed6a7d67dc3b7b2e2d5a9e3c3ef7fc 196159488;191937897 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-77_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 13112750 ERR11660414 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/014/ERR11660414/ERR11660414_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/014/ERR11660414/ERR11660414_2.fastq.gz 36dea522b91f2cb94f84af3b30f5c32d;8f328b9e11696d23d59ee579fd1d7dc8 209935149;214549833 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-77_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 13122580 ERR11660415 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/015/ERR11660415/ERR11660415_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/015/ERR11660415/ERR11660415_2.fastq.gz d13e74eaa55c63342c1e4809a6dadbc3;7c15e5344c601b78cd122b9df320dcee 213565336;209603343 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-77_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1395530 ERR11660416 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/016/ERR11660416/ERR11660416_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/016/ERR11660416/ERR11660416_2.fastq.gz 756ae9a52ad54b6d32c3706fc57b8604;5b8b54a89f3bc4b3b1c9d867283e6c2c 37903659;39540661 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-78_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11236286 ERR11660417 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/017/ERR11660417/ERR11660417_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/017/ERR11660417/ERR11660417_2.fastq.gz 3d651d50e27f9f10a31c3862abc7a5a3;2887f52434034856f5cd37f11068d0c1 179402805;183343292 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-78_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/010/ERR11660410/ERR11660410_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/010/ERR11660410/ERR11660410_2.fastq.gz 3f87a6d7d9ca1eb5df32cd93f9a66f25;cb49ddfb3a589ea1e38e1c527093d476 24872371;24397508 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-78_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1290082 ERR11660419 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/019/ERR11660419/ERR11660419_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/019/ERR11660419/ERR11660419_2.fastq.gz 233bf1ab18d97fad49f1bb5484f2c088;ec76be62522d7fd73d6b4c9e2935e136 35851914;34375810 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-79_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11145480 ERR11660420 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/020/ERR11660420/ERR11660420_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/020/ERR11660420/ERR11660420_2.fastq.gz ac5c0e0ce0f818c55c67eaf72416fe0f;9cebd0ca4e52ea80483593635323e887 178300420;183061766 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-80_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11252586 ERR11660424 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/024/ERR11660424/ERR11660424_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/024/ERR11660424/ERR11660424_2.fastq.gz adfb95f2f75fb41bda1406f3641cf4ed;047e0a7fae662f4f8787ceeef670163b 182599851;179187636 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-80_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1032062 ERR11660425 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/025/ERR11660425/ERR11660425_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/025/ERR11660425/ERR11660425_2.fastq.gz 3fcc2117242154932b6382ab9f8ab2a4;4ea24d58af027a524a20f4808e4ac1ea 27517633;28773829 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-81_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11184792 ERR11660426 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/026/ERR11660426/ERR11660426_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/026/ERR11660426/ERR11660426_2.fastq.gz 904aedeb6b30dbb6ca88b733cd73dfa4;395ca80600fa9a4823c26ed61605d7ba 183165865;178901785 -Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-81_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11168602 ERR11660427 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/027/ERR11660427/ERR11660427_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/027/ERR11660427/ERR11660427_2.fastq.gz 378c0a501f4ab156d9c2c384dab9b5ac;84db574b20d5254da215cf8fdf458118 181992370;178329735 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H50_1 SRA PRJNA1021938 SRS20486703 MMW_H50_1_cap double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 3329459 SRR28001574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/074/SRR28001574/SRR28001574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/074/SRR28001574/SRR28001574_2.fastq.gz 2dde567228b8cb4e49449f361b8d9ca1;fd6a9a5fda73797c1af3becb2efbff53 156467184;159121792 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H50_1 SRA PRJNA1021938 SRS20486703 MMW_H50_1_sg double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 3613368 SRR28001551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/051/SRR28001551/SRR28001551_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/051/SRR28001551/SRR28001551_2.fastq.gz b4802915a7ee94318e0934904bb83f3d;0ba9f6ce56fc624ab42296c4997b2c0 169044170;176617490 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H80_1 SRA PRJNA1021938 SRS20486681 MMW_H80_1_cap double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 7566799 SRR28001572 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/072/SRR28001572/SRR28001572_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/072/SRR28001572/SRR28001572_2.fastq.gz 5a040f140b2f8b900d778bc8cd2df68f;5c7ad27382077a5ea9810e8b00757194 350808159;362817661 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H80_1 SRA PRJNA1021938 SRS20486681 MMW_H80_1_sg double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 3482302 SRR28001598 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/098/SRR28001598/SRR28001598_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/098/SRR28001598/SRR28001598_2.fastq.gz 6e1fec40d1b00b9849f790de212fbaef;4cc9847db4a82bcb5bd3e3c66e042f56 162147728;171102778 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H94_1 SRA PRJNA1021938 SRS20486688 MMW_H94_1_cap double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 1782739 SRR28001571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/071/SRR28001571/SRR28001571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/071/SRR28001571/SRR28001571_2.fastq.gz 50c5247c2ce1379020d984c96a21d26a;512f593af4db02058317019e74ebbca5 83975345;85935256 -Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H94_1 SRA PRJNA1021938 SRS20486688 MMW_H94_1_sg double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 3529513 SRR28001591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/091/SRR28001591/SRR28001591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/091/SRR28001591/SRR28001591_2.fastq.gz 696354cf94aa4a9f084606d76b2ffa3c;8609b8c0bb99b3171b4a7135a0dfb71c 162033285;169966357 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capKAPA double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE Targeted-Capture 8823598 SRR28001561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/061/SRR28001561/SRR28001561.fastq.gz 2e5d9ad74ef2ae38529e0de37a327112 395881457 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 7339169 SRR28001570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/070/SRR28001570/SRR28001570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/070/SRR28001570/SRR28001570_2.fastq.gz 57a7557b0f9b7b708685d20647c1aeca;e4e3b0cf1e5ca8056eabb08743d452f3 336089684;363686496 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 13883156 SRR28001568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/068/SRR28001568/SRR28001568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/068/SRR28001568/SRR28001568_2.fastq.gz 1c9c505d7d564c21c304390f15ae4e0c;334e7c75668a27dc2eca91f65444e9f8 608641869;654087235 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run3 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 3237493 SRR28001566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/066/SRR28001566/SRR28001566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/066/SRR28001566/SRR28001566_2.fastq.gz 1321a2e0be625a062e5969f47c108676;9a5ae164bf0f384c888216cff238f867 132230475;143538989 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run4 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 3317272 SRR28001564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/064/SRR28001564/SRR28001564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/064/SRR28001564/SRR28001564_2.fastq.gz e23a49764bc751360a919dae08de14c5;862cc45fb142f1a5536861a2bfc4fa02 137664283;154045731 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_sg_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 4246407 SRR28001589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/089/SRR28001589/SRR28001589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/089/SRR28001589/SRR28001589_2.fastq.gz 939f80e713295caebc3be5bed71e19c3;8335066159b39fd4374779e8da15b7e8 196998487;209697605 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_sg_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 10104162 SRR28001587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/087/SRR28001587/SRR28001587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/087/SRR28001587/SRR28001587_2.fastq.gz 9f2bdfada83f9bcd8c072f1a9f894c28;467b3f87c412782a9e5827d372d48b73 434877638;459606127 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capKAPA double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE Targeted-Capture 28493511 SRR28001560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/060/SRR28001560/SRR28001560.fastq.gz 3028f1a70f4d7197cc64351f870052f0 1252220085 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 73721739 SRR28001569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/069/SRR28001569/SRR28001569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/069/SRR28001569/SRR28001569_2.fastq.gz c570960b677437696b43e4e63e787f8d;0c479ac1e0c7ae3b7024115c5124a227 3178845451;3426341754 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 51916693 SRR28001567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/067/SRR28001567/SRR28001567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/067/SRR28001567/SRR28001567_2.fastq.gz f731005acab81baf6e218b8a2f68f207;b2c61e2354fb6088ccbae84dd38e63ca 2269898961;2342544905 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run3 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 14696554 SRR28001565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/065/SRR28001565/SRR28001565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/065/SRR28001565/SRR28001565_2.fastq.gz 4fe2246a40d429d70cb741c9373e2c57;4ed0a6f047bc14ac85daaa7b397c1c76 584446190;621416780 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run4 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 14336952 SRR28001563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/063/SRR28001563/SRR28001563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/063/SRR28001563/SRR28001563_2.fastq.gz 0c00297d41d8bf0c828226b3cafab542;095e90091cb5d9769ed9f538136275ef 581835802;630491193 -Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_sg_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 1604157 SRR28001588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/088/SRR28001588/SRR28001588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/088/SRR28001588/SRR28001588_2.fastq.gz ca969148cd913848121ae2a4de4e2125;9ea93852575548bfc1536b06e840850c 70368500;72656572 -Sun2024 2024 10.1038/s41467-024-47358-6 XBQM86 GSA PRJCA020853 SAMC3135916 XBQM86 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1202 CRR927065 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927065/CRR927065.fastq.gz 0afb3e7323612b9896dabc793aa9712d 223595 -Sun2024 2024 10.1038/s41467-024-47358-6 MY19 GSA PRJCA020853 SAMC3135917 MY19 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 128 CRR927066 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927066/CRR927066.fastq.gz a700798184068f2c8ff783a7c565929b 29836 -Sun2024 2024 10.1038/s41467-024-47358-6 XHM12 GSA PRJCA020853 SAMC3135918 XHM12 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 303 CRR927067 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927067/CRR927067.fastq.gz 3af7bd9be1083bb13c4bbc343b5eda12 57447 -Sun2024 2024 10.1038/s41467-024-47358-6 XHM16 GSA PRJCA020853 SAMC3135919 XHM16 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 52 CRR927068 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927068/CRR927068.fastq.gz c2c46e4b624381addc13285905ad6a74 11016 -Sun2024 2024 10.1038/s41467-024-47358-6 XHM18 GSA PRJCA020853 SAMC3135920 XHM18 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 16454 CRR927069 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927069/CRR927069.fastq.gz 3bafd57e87750b756a25088f303f47d0 3444176 -Sun2024 2024 10.1038/s41467-024-47358-6 XHM23 GSA PRJCA020853 SAMC3135921 XHM23 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 202 CRR927070 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927070/CRR927070.fastq.gz 79ba0c7ec422300c001e1be7902a5769 39564 -Sun2024 2024 10.1038/s41467-024-47358-6 XHM31 GSA PRJCA020853 SAMC3135922 XHM31 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 211 CRR927071 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927071/CRR927071.fastq.gz 9ff852aa1d06ff2f0cafd209be1b4e62 42376 -Sun2024 2024 10.1038/s41467-024-47358-6 NYM8 GSA PRJCA020853 SAMC3135923 NYM8 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1 CRR927072 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927072/CRR927072.fastq.gz 4410b8fe257a985c7be0dc0517d54e07 9981 -Sun2024 2024 10.1038/s41467-024-47358-6 AT7 GSA PRJCA020853 SAMC3135924 AT7 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 13704 CRR927073 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927073/CRR927073.fastq.gz 5c4641d09265f161b3552927fdec5544 3043171 -Sun2024 2024 10.1038/s41467-024-47358-6 AT19 GSA PRJCA020853 SAMC3135925 AT19 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 10636 CRR927074 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927074/CRR927074.fastq.gz 5a064fe6d09dee1551b68bb8ab7cb2b2 2338977 -Sun2024 2024 10.1038/s41467-024-47358-6 AT24 GSA PRJCA020853 SAMC3135926 AT24 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 61423 CRR927075 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927075/CRR927075.fastq.gz 441277d72a0fb88de70651fc7aa6375b 12309356 -Sun2024 2024 10.1038/s41467-024-47358-6 TJZM25-2 GSA PRJCA020853 SAMC3135927 TJZM25-2 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 4762 CRR927076 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927076/CRR927076.fastq.gz de70d2e8be8401580ac2d57680481fca 1051450 -Sun2024 2024 10.1038/s41467-024-47358-6 XBQM47 GSA PRJCA020853 SAMC3135928 XBQM47 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 387 CRR927077 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927077/CRR927077.fastq.gz c612f1ff29b4b53ad602cc99a7dbc77d 83061 -Sun2024 2024 10.1038/s41467-024-47358-6 XN12 GSA PRJCA020853 SAMC3135929 XN12 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 25849 CRR927078 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927078/CRR927078.fastq.gz 288a847042395d91c438138daaa46825 5262439 -Sun2024 2024 10.1038/s41467-024-47358-6 XFLDM173 GSA PRJCA020853 SAMC3135930 XFLDM173 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 402 CRR927079 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927079/CRR927079.fastq.gz 7041ba33ab1395f72341305234a9687f 81030 -Sun2024 2024 10.1038/s41467-024-47358-6 91KLH18 GSA PRJCA020853 SAMC3135931 91KLH18 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 5629 CRR927080 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927080/CRR927080.fastq.gz b0d11e8798061ce353c12e25349497e1 1231527 -Sun2024 2024 10.1038/s41467-024-47358-6 FLTM18 GSA PRJCA020853 SAMC3135932 FLTM18 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 133 CRR927081 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927081/CRR927081.fastq.gz e2bae3909f732ede9ff7e136566437cb 23624 -Sun2024 2024 10.1038/s41467-024-47358-6 FLTM48 GSA PRJCA020853 SAMC3135933 FLTM48 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 9795 CRR927082 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927082/CRR927082.fastq.gz dd453ddb39f0e9471ed1c457bd45aad7 2229530 -Sun2024 2024 10.1038/s41467-024-47358-6 FLTM97 GSA PRJCA020853 SAMC3135934 FLTM97 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 256 CRR927083 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927083/CRR927083.fastq.gz 61cdf7d3027fc72634938a0bfb75c566 46564 -Sun2024 2024 10.1038/s41467-024-47358-6 FLTM101 GSA PRJCA020853 SAMC3135935 FLTM101 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 13700 CRR927084 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927084/CRR927084.fastq.gz 3dccd8a09553e1fd4c3c4f841de45688 3278731 -Sun2024 2024 10.1038/s41467-024-47358-6 96NVZIM6 GSA PRJCA020853 SAMC3135946 96NVZIM6 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 380 CRR927095 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927095/CRR927095.fastq.gz 089be53544d5f2695c9ad4712b0d3286 67280 -Sun2024 2024 10.1038/s41467-024-47358-6 JHM2098 GSA PRJCA020853 SAMC3135947 JHM2098 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 789 CRR927096 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927096/CRR927096.fastq.gz 8f518f8eba35623ac1f13e9dab4d8fcb 167009 -Sun2024 2024 10.1038/s41467-024-47358-6 SBSM101 GSA PRJCA020853 SAMC3135948 SBSM101 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1334 CRR927097 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927097/CRR927097.fastq.gz 442a689c042bca7607c85169f5322bf3 294255 -Sun2024 2024 10.1038/s41467-024-47358-6 HHM29 GSA PRJCA020853 SAMC3135949 HHM29 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 3216 CRR927098 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927098/CRR927098.fastq.gz 0067075d17fc979e181674515a7101a6 585862 -Sun2024 2024 10.1038/s41467-024-47358-6 98JJLM9 GSA PRJCA020853 SAMC3135936 98JJLM9 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 5035 CRR927085 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927085/CRR927085.fastq.gz 8401b510716d51a40230294e09dbc85d 907443 -Sun2024 2024 10.1038/s41467-024-47358-6 95JJLM34 GSA PRJCA020853 SAMC3135937 95JJLM34 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 232 CRR927086 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927086/CRR927086.fastq.gz 6c17d6eeca569489e6fb2438a0c1962e 44492 -Sun2024 2024 10.1038/s41467-024-47358-6 95JJLM51 GSA PRJCA020853 SAMC3135938 95JJLM51 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 100 CRR927087 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927087/CRR927087.fastq.gz 45964c289765966b9e886f52ceddf7d3 18943 -Sun2024 2024 10.1038/s41467-024-47358-6 MY12 GSA PRJCA020853 SAMC3135939 MY12 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 14201 CRR927088 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927088/CRR927088.fastq.gz 0f2e470e393b8d18ed6c23a89301f6ee 2824101 -Sun2024 2024 10.1038/s41467-024-47358-6 MY17 GSA PRJCA020853 SAMC3135940 MY17 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 206 CRR927089 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927089/CRR927089.fastq.gz ea3e8717718bb5d2f0ebd683051bf987 44352 -Sun2024 2024 10.1038/s41467-024-47358-6 ZQM16 GSA PRJCA020853 SAMC3135941 ZQM16 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 658 CRR927090 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927090/CRR927090.fastq.gz 68fd0e51e576017dcbf2a657cf0e2a26 157527 -Sun2024 2024 10.1038/s41467-024-47358-6 XBQM20 GSA PRJCA020853 SAMC3135942 XBQM20 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 275 CRR927091 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927091/CRR927091.fastq.gz 0d216dc263ec208aa723dcd55999f743 59158 -Sun2024 2024 10.1038/s41467-024-47358-6 XBQM46 GSA PRJCA020853 SAMC3135943 XBQM46 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 16540 CRR927092 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927092/CRR927092.fastq.gz 8abe20d7ad71529e7606cf357155ccbc 3868947 -Sun2024 2024 10.1038/s41467-024-47358-6 XBQM125 GSA PRJCA020853 SAMC3135944 XBQM125 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 343 CRR927093 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927093/CRR927093.fastq.gz 45efa889dc53958b1e64eb13b3a4fbb2 90445 -Sun2024 2024 10.1038/s41467-024-47358-6 11KBM13 GSA PRJCA020853 SAMC3135945 11KBM13 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 1690 CRR927094 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927094/CRR927094.fastq.gz c7360f598593b3e4980300f34bca35e4 254052 -Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L5 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 145317698 ERR6466112 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz e4e00eb66e236b20020f6d12323ff24d 5064443689 -Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L3 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 164415447 ERR6466110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz 3387cbb54cd5593384586c3f70787405 6026604046 -Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L1 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 9413628 ERR6466108 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz 082fa661d3351c0fac22e2e922dc3795 342573885 -Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L2 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 123717709 ERR6466109 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz 267fe0d4b684a1cf765ae560abdfbbc3 4352735230 -Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L4 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 141415855 ERR6466111 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz 7bed95eb12f3d17c93fd6d47c5edfd04 4974034411 -White2021 2021 10.3390/biology10121324 B2_B3 ENA PRJEB49091 ERS9769380 L022 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 172363072 ERR13663673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_2.fastq.gz 93fe32a1e7baafdbe2ab5fde69a6d998;47cf6d5fec371200015a493a0839c828 4381516936;4643855551 -White2021 2021 10.3390/biology10121324 B2_B5 ENA PRJEB49091 ERS9769381 L023 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 165002236 ERR13663674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_2.fastq.gz 370f2ee1d8d3929d4999d1ef6ba795f5;0390ac309d270d11f8ef01d1a98fe74f 4143803128;4491981331 -White2021 2021 10.3390/biology10121324 B2_B6 ENA PRJEB49091 ERS9769382 L024 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 164114498 ERR13663676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_2.fastq.gz abafcc2b76f2d56f01e5c6ed95f0f20c;e65f30975fa8ff540a9083b77b25646b 4147933772;4482524602 -White2021 2021 10.3390/biology10121324 B2_B6 ENA PRJEB49091 ERS9769382 L024-B double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 108865268 ERR13663675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/075/ERR13663675/ERR13663675_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/075/ERR13663675/ERR13663675_2.fastq.gz 9f698e07345a859feb34cb4e99a55d11;d7d70554b02c6f5dc7952fd2485c163c 2589844121;2788114713 -White2021 2021 10.3390/biology10121324 B2_B7 ENA PRJEB49091 ERS9769383 L025-B double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 81293780 ERR13663677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/077/ERR13663677/ERR13663677_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/077/ERR13663677/ERR13663677_2.fastq.gz 00eb8d335bfedd6a0569e708bb5be5f8;3b34fc20b2c7a012ce5d25d177d55dc8 2074741912;2130629421 -White2021 2021 10.3390/biology10121324 B2_B7 ENA PRJEB49091 ERS9769383 L025 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 179780446 ERR13663678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/078/ERR13663678/ERR13663678_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/078/ERR13663678/ERR13663678_2.fastq.gz 47149ec413c0a14645b7a838fc088507;1372803ee3d494b1876b82982c69d10c 4575913200;4879999751 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_1 ENA PRJEB49648 ERS19529513 KH201292 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 407857327 ERR13081220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/020/ERR13081220/ERR13081220.fastq.gz 5175e567917874e58afc0ba7d0842df2 10971181148 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_1 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 825408927 ERR13081216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/016/ERR13081216/ERR13081216.fastq.gz 6cc72b1013107335a732b1de3c42315b 32378107839 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 779197269 ERR13081217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/017/ERR13081217/ERR13081217.fastq.gz e3716b3fcc0dc508355bac4066e98440 30780770975 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_3 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 331237067 ERR13081218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/018/ERR13081218/ERR13081218.fastq.gz 859d36af02ca9bc64a77a6198d647339 13693431199 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_4 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 264407276 ERR13081219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/019/ERR13081219/ERR13081219.fastq.gz e24316d796fcb34c2594f4aef1dc1a85 10868287934 -Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 37042575 ERR11752794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/094/ERR11752794/ERR11752794.fastq.gz 61b28af972bb99c8af64f6cc137cc84f 1221430231 -Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 12385850 ERR11752829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/029/ERR11752829/ERR11752829.fastq.gz f33fbe0a91a977678b8b00eb598edc47 478376457 -Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14284810 ERR11752821 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/021/ERR11752821/ERR11752821.fastq.gz 42a4d8479b85314b773b2154ed2ac4ab 797876394 -Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 17498050 ERR11752819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/019/ERR11752819/ERR11752819.fastq.gz 0f53118d59d4fa310bd8ad8985d30f60 780976768 -Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13354174 ERR11752820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/020/ERR11752820/ERR11752820.fastq.gz 774102835d045e5c1265d564dcda39db 705048039 -Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 4009656 ERR11752826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/026/ERR11752826/ERR11752826.fastq.gz ffbdb5ba8066de958196e658c220b052 172669974 -Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14918027 ERR11752801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/001/ERR11752801/ERR11752801.fastq.gz 233585ed450ade62105cad34d7657114 665276656 -Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 399816 ERR11752836 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/036/ERR11752836/ERR11752836.fastq.gz 8909d81e09ec7678b427cb94b06c1a7f 21075785 -Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 31778764 ERR11752802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/002/ERR11752802/ERR11752802.fastq.gz a753c7376d611562c9dfad5c49231b29 1448491519 -Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1382753 ERR11752837 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/037/ERR11752837/ERR11752837.fastq.gz 61712026cb96f12ff8419fd49abcea5f 71239939 -Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13580762 ERR11752812 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/012/ERR11752812/ERR11752812.fastq.gz 9cde7f94d06fe759c11f7743c84cc5ba 481816518 -Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19048033 ERR11752813 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/013/ERR11752813/ERR11752813.fastq.gz 5062d1c7d9b19cae8d3960a71f99217f 754542823 -Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1180056 ERR11752789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/089/ERR11752789/ERR11752789.fastq.gz 9583cbef85f1928ba764c31e6c694ffc 50854724 -Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 21850387 ERR11752811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/011/ERR11752811/ERR11752811.fastq.gz c94158533a06984bbade6264a79baca9 849503959 -Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7502551 ERR11752800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/000/ERR11752800/ERR11752800.fastq.gz 70996dd13cc662f87f82d8e15e32d074 255227717 -Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 514773 ERR11752835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/035/ERR11752835/ERR11752835.fastq.gz cf7ae7385254fbc368f1ad58ad8f2305 25314972 -Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 6260607 ERR11752830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/030/ERR11752830/ERR11752830.fastq.gz 4278f73e393ffb4c1997334d63da02eb 230231901 -Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 2755487 ERR11752795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/095/ERR11752795/ERR11752795.fastq.gz af6467ca96f0cde487fcaeaa46f04deb 82930819 -Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1271624 ERR11752838 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/038/ERR11752838/ERR11752838.fastq.gz 9a858ecc34f945de0db706a7a6c837f2 68021197 -Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 18536478 ERR11752803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/003/ERR11752803/ERR11752803.fastq.gz f9f21a911e4325b6774abc9ba4100f16 951574389 -Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 15068644 ERR11752810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/010/ERR11752810/ERR11752810.fastq.gz 2d861ef1204de1972cf66d010b7bfb46 842427926 -Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 39436478 ERR11752799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/099/ERR11752799/ERR11752799.fastq.gz ebf2be69af0e70d81d07de899065e9e6 1579984549 -Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19370251 ERR11752809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/009/ERR11752809/ERR11752809.fastq.gz f5c41bfb006fbb7529f7053cfeebaa69 1031334963 -Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 992802 ERR11752834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/034/ERR11752834/ERR11752834.fastq.gz a9094c2a2c8d5916a9e4967db9c6bfd5 55769718 -Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 10061322 ERR11752808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/008/ERR11752808/ERR11752808.fastq.gz 4a92fe502c283d7f77a22c715a045041 415208529 -Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 12046398 ERR11752807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/007/ERR11752807/ERR11752807.fastq.gz 17c916719a2009fbc32f83edd3521778 499609022 -Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1361554 ERR11752833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/033/ERR11752833/ERR11752833.fastq.gz 887d9732eef613f5df159e67ed16cf21 49122284 -Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 6500466 ERR11752798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/098/ERR11752798/ERR11752798.fastq.gz 80ab9700892ff2a1b27ece222d9a634e 196241935 -Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13990806 ERR11752818 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/018/ERR11752818/ERR11752818.fastq.gz b5d7892251467072310d35bc23b9da79 729548479 -Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7352560 ERR11752816 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/016/ERR11752816/ERR11752816.fastq.gz 45dc0bb7e87a7b35f038f29c55609a25 327426658 -Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 8931251 ERR11752817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/017/ERR11752817/ERR11752817.fastq.gz 562a8b2c522e044fc2a9566eac666574 485267477 -Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 5200014 ERR11752823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/023/ERR11752823/ERR11752823.fastq.gz 3225e74fd871ab61f8e58b3a2f2b93d0 212944176 -Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9537030 ERR11752814 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/014/ERR11752814/ERR11752814.fastq.gz ffb3748704649acb8a5f278187f58170 473911967 -Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9878005 ERR11752815 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/015/ERR11752815/ERR11752815.fastq.gz 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ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv --- ...entsinglegenome-hostassociated_samples.tsv | 742 ------------------ 1 file changed, 742 deletions(-) delete mode 100644 ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv deleted file mode 100644 index 3863623ac..000000000 --- a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv +++ /dev/null @@ -1,742 +0,0 @@ -project_name publication_year publication_doi site_name latitude longitude geo_loc_name sample_name sample_host sample_age sample_age_doi singlegenome_domain singlegenome_species material genome_type archive data_type archive_project archive_accession -Schuenemann2013 2013 10.1126/science.1238286 Sigtuna 59.618 17.726 Sweden 3077 Homo sapiens 900 10.1126/science.1238286 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA200950 SRS418834 -Schuenemann2013 2013 10.1126/science.1238286 St. Jørgen cemetery, Odense 55.399 10.406 Denmark Jorgen_625 Homo sapiens 600 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS418854 -Schuenemann2013 2013 10.1126/science.1238286 Refshale 56.193 9.394 Denmark Refshale_16 Homo sapiens 900 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS419262,SRS418858,SRS418859 -Schuenemann2013 2013 10.1126/science.1238286 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom SK2 Homo sapiens 700 10.1126/science.1238286 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA200950 SRS418843 -Schuenemann2013 2013 10.1126/science.1238286 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom SK8 Homo sapiens 1000 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS418845 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Szentes-Kistőke 46.715 20.281 Hungary SK11 Homo sapiens 1300 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667046 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Necropoli Vicenne Campochiaro 41.564 14.498 Italy T18 Homo sapiens 1300 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667044 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Prušánky 48.831 16.982 Czechia Body 188 Homo sapiens 1100 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667047 -Schuenemann2018 2018 10.1371/journal.ppat.1006997 Great Chesterford 52.063 0.193 United Kingdom GC96 Homo sapiens 1500 10.1371/journal.pone.0124282 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667045 -Warinner2014 2014 10.1038/ng.2906 Dalheim 51.565 8.84 Germany G12 Homo sapiens 900 10.1038/ng.2906 bacteria Tannerella forsythia tooth chromosome SRA raw PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 -Bos2014 2014 10.1038/nature13591 El Yaral -17.41 -71.092 Peru 64 Homo sapiens 900 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS592075 -Bos2014 2014 10.1038/nature13591 El Algodonal -17.583 -71.21 Peru 58 Homo sapiens 1000 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS591992 -Bos2014 2014 10.1038/nature13591 Chiribaya Alta -17.621 -71.269 Peru 54 Homo sapiens 900 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS591994 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Rasshevatskiy 45.569 41.03 Russia RK1001 Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892069 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Beli Manastir-Popova zemlja 45.77 18.61 Croatia GEN72 Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892068 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai 55.913 24.89 Lithuania Gyvakarai1 Homo sapiens 4000 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892064 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Kunila 58.616 23.796 Estonia KunilaII Homo sapiens 4000 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892065 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Haunstetten Unterer Talweg 85 48.318 10.891 Germany 1343UnTal85 Homo sapiens 3800 10.1371/journal.pone.0139705 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892067 -AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Haunstetten Postillionstrasse 6 48.308 10.893 Germany 6Post Homo sapiens 3600 10.1371/journal.pone.0139705 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892066 -Spyrou2018 2018 10.1038/s41467-018-04550-9 Mikhailovsky II burial site 53.2 50.2 Russia RT5 Homo sapiens 3500 10.1038/s41467-018-04550-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24296 ERS2106903 -Spyrou2018 2018 10.1038/s41467-018-04550-9 Mikhailovsky II burial site 53.2 50.2 Russia RT6 Homo sapiens 3500 10.1038/s41467-018-04550-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24296 ERS2106904 -Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gökhem 94:1, Frälsegården 58.173 13.407 Sweden Gok2 Homo sapiens 4400 10.1016/j.cell.2018.11.005 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB6090 ERS434180 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Sope 59.408 27.026 Estonia RISE00 Homo sapiens 4000 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848971 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Chociwel 50.796 17.094 Poland RISE139 Homo sapiens 3600 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848972 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bulanovo 52.453 55.16 Russia RISE386 Homo sapiens 3800 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848973 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Kapan 39.2 46.4 Armenia RISE397 Homo sapiens 2800 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848974 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Kytmanovo 53.456 85.447 Russia RISE505 Homo sapiens 3400 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848975 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bateni 54.584 90.775 Russia RISE509 Homo sapiens 4200 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848976 -Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bateni 54.584 90.775 Russia RISE511 Homo sapiens 2900 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848977 -Yu2020 2020 10.1016/j.cell.2020.04.037 Glazkovskoe Predmestie Site 52.279 104.251 Russia GLZ001 Homo sapiens 4600 10.1016/j.cell.2020.04.037 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37007 ERS4540520 -Yu2020 2020 10.1016/j.cell.2020.04.037 Glazkovskoe Predmestie Site 52.279 104.251 Russia GLZ002 Homo sapiens 4400 10.1016/j.cell.2020.04.037 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37007 ERS4540521 -Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod1 Homo sapiens 800 10.7554/eLife.20983 bacteria Gardnerella vaginalis calcified nodule chromosome SRA raw PRJNA352376 SRS1779841,SRS1779840 -Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod1 Homo sapiens 800 10.7554/eLife.20983 bacteria Staphylococcus saprophyticus calcified nodule chromosome SRA raw PRJNA352376 SRS1779841,SRS1779840 -Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod2 Homo sapiens 800 10.7554/eLife.20983 bacteria Gardnerella vaginalis calcified nodule chromosome SRA raw PRJNA352376 SRS1779846,SRS1779844 -Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod2 Homo sapiens 800 10.7554/eLife.20983 bacteria Staphylococcus saprophyticus calcified nodule chromosome SRA raw PRJNA352376 SRS1779846,SRS1779844 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Bulanovo 52.453 55.16 Russia RISE387 Homo sapiens 3800 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992447 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Sandorfalva-Eperjes 46.344 20.162 Hungary DA195 Homo sapiens 2500 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992441 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Osterhofen-Altenmarkt 48.691 13.061 Germany RISE563 Homo sapiens 4000 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992443 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Szàzhalombatta-Földvàr 47.372 18.962 Hungary RISE254 Homo sapiens 3600 10.1038/s41586-018-0097-z virus Hepatitis B virus bone chromosome GenBank consensus,assembly PRJEB25584 LT992459 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Karasyur 46.997 66.285 Kazakhstan DA29 Homo sapiens 800 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992438 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Halvay 3 52.836 62.893 Kazakhstan DA27 Homo sapiens 1600 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992439 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Poprad 49.077 20.317 Slovakia DA119 Homo sapiens 1500 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992440 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Omnogobi 42.525 105.18 Mongolia DA45 Homo sapiens 2000 10.1038/s41586-018-0097-z virus Hepatitis B virus bone chromosome GenBank consensus,assembly PRJEB25584 LT992442 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Szczepankowice 50.948 16.943 Poland RISE154 Homo sapiens 3500 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992455 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Keden 41.428 75.329 Kyrgyzstan DA51 Homo sapiens 2200 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992444 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Bulanovo 52.453 55.16 Russia RISE386 Homo sapiens 3800 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992448 -Muhlemann2018 2018 10.1038/s41586-018-0097-z Butakty 43.202 76.981 Kazakhstan DA222 Homo sapiens 1100 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992454 -Dux2020 2020 10.1126/science.aba9411 Berlin 52.51 13.4 Germany BMM 655/1912 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus lung tissue chromosome ENA raw PRJEB36265 ERS4249335 -Dux2020 2020 10.1126/science.aba9411 Prague 50.06 14.46 Czechia MVi/Prague.CZE/60/1 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus isolate chromosome ENA raw PRJEB36265 ERS4249362 -Dux2020 2020 10.1126/science.aba9411 Prague 50.06 14.46 Czechia Mvi/Prague.CZE/60/2 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus isolate chromosome ENA raw PRJEB36265 ERS4249363 -Maixner2016 2016 10.1126/science.aad2545 Hauslabjoch 46.773 10.837 Italy Iceman Stomach/Intestine (1054/1051/1063/1036) Homo sapiens 5300 10.1126/science.aad2545 bacteria Helicobacter pylori digestive tract contents chromosome ENA raw PRJEB11511 ERS942275,ERS942266,ERS942283,ERS942284,ERS942285,ERS942286,ERS942287,ERS942288,ERS942289,ERS942290,ERS942291,ERS942292,ERS942293,ERS942294,ERS942267,ERS942277,ERS942270,ERS942274,ERS942269,ERS942268,ERS942271,ERS942265,ERS942273,ERS942272,ERS942281,ERS942282 -Guellil2018 2018 10.1073/pnas.1807266115 St Nicolay’s ALT St Clement's Church, Oslo 59.904 10.765 Norway OSL9a Homo sapiens 400 10.1073/pnas.1807266115 bacteria Borrelia recurrentis tooth chromosome ENA raw PRJEB24501 ERS2591211 -Guellil2018 2018 10.1073/pnas.1807266115 St Nicolay’s ALT St Clement's Church, Oslo 59.904 10.765 Norway OSL9b Homo sapiens 400 10.1073/pnas.1807266116 bacteria Borrelia recurrentis tooth chromosome ENA raw PRJEB24501 ERS2591210 -Duggan2016 2016 10.1016/j.cub.2016.10.061 Dominican Church of the Holy Spirit of Vilnius 54.681 25.284 Lithuania VD21 Homo sapiens 300 10.1016/j.cub.2016.10.061 virus Variola virus skin chromosome SRA raw PRJNA348754 SRS1749354 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 Uch-Kurbu 42.159 77.406 Kyrgyzstan DA101 Homo sapiens 1800 10.1038/s41586-018-0094-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB25891 ERS2367268 -deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 Unknown 42.861 44.185 Russia DA147 Homo sapiens 1300 10.1038/s41586-018-0094-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB25891 ERS2367269 -Key2020 2020 10.1038/s41559-020-1106-9 Murzikhinsky II 55.304 50.086 Russia MUR009 Homo sapiens 5700 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967963 -Key2020 2020 10.1038/s41559-020-1106-9 Murzikhinsky II 55.304 50.086 Russia MUR019 Homo sapiens 5600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967964 -Key2020 2020 10.1038/s41559-020-1106-9 Ipatovo 3 45.685 42.921 Russia IV3002 Homo sapiens 4600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967967 -Key2020 2020 10.1038/s41559-020-1106-9 Ikiztepe 41.612 35.87 Turkey IKI003 Homo sapiens 4500 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967961 -Key2020 2020 10.1038/s41559-020-1106-9 Oberbipp 47.262 7.659 Switzerland OBP001 Homo sapiens 4600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967965 -Key2020 2020 10.1038/s41559-020-1106-9 Su Asedazzu 39.512 9.145 Italy SUA004 Homo sapiens 3800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967966 -Key2020 2020 10.1038/s41559-020-1106-9 Marinskaya 3 43.905 43.521 Russia MK3001 Homo sapiens 2800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967962 -Key2020 2020 10.1038/s41559-020-1106-9 Chiusi 43.016 11.95 Italy ETR001 Homo sapiens 1800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967960 -Barquera2020 2020 10.1016/j.cub.2020.04.002 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN003 Homo sapiens 500 10.1016/j.cub.2020.04.002 bacteria Treponema pallidum tooth chromosome ENA raw PRJEB37490 ERS4529000,ERS4529001 -Barquera2020 2020 10.1016/j.cub.2020.04.002 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN001 Homo sapiens 500 10.1016/j.cub.2020.04.002 virus Hepatitis B virus tooth chromosome ENA raw PRJEB37490 ERS4528997,ERS4528998 -KrauseKyora2018 2018 10.7554/eLife.36666 Karsdorf 51.27 11.65 Germany Karsdorf Homo sapiens 7000 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200179 -KrauseKyora2018 2018 10.7554/eLife.36666 Sorsum 52.27 9.61 Germany Sorsum Homo sapiens 5100 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200180 -KrauseKyora2018 2018 10.7554/eLife.36666 Petersberg 47.71 12.12 Germany Petersberg Homo sapiens 900 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200178 -Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU007 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398261 -Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU010 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4410876 -Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU020 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398262 -Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU025 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398263 -Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU007 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Treponema pallidum tooth chromosome ENA raw PRJEB37508 ERS4398260 -Feldman2016 2016 10.1093/molbev/msw170 Altenerding 48.287 11.903 Germany AE1175 Homo sapiens 1500 10.1093/molbev/msw170 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB14851 ERS1266114 -BarGal2012 2012 10.1002/hep.25852 Yangju 37.8 127.0 South Korea Yangju child mummy Homo sapiens 300 10.1002/hep.25852 virus Hepatitis B virus liver chromosome GenBank consensus Unknown JN315779 -Keller2019 2019 10.1073/pnas.1820447116 Dittenheim 49.055 10.792 Germany DIT003.B Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465379 -Keller2019 2019 10.1073/pnas.1820447116 Dittenheim 49.055 10.792 Germany DIT004 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465380,ERS3465381 -Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI001.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465382 -Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI003.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465383 -Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI004.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465384 -Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465385 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD001.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465386 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD002.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465387 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD007.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465388 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD013.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465389 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD019.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465390 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD020.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465391 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD021.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465392 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD022.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465393 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD023.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465394 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD024.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465395 -Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD026.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465396 -Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC001 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465397,ERS3465398 -Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC005 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465399,ERS3465400,ERS3465401 -Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465402 -Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET004.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465404 -Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465405 -Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465406 -Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT002.A Homo sapiens 1600 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465407 -Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT003.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465408 -Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT004.A Homo sapiens 1600 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465409 -Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465410 -Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465411 -Keller2019 2019 10.1073/pnas.1820447116 Valencia 39.476 -0.374 Spain VAL001.B Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465403 -Keller2019 2019 10.1073/pnas.1820447116 Waging 47.934 12.733 Germany WAG001.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465412 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Tian Shan 41.501 75.794 Kyrgyzstan DA66 Homo sapiens 1500 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA66 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA337 Homo sapiens 4000 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA337 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Gotland 57.63 18.28 Sweden VK477 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK477 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Brandýsek 50.18 14.15 Czechia RISE569 Homo sapiens 1300 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 RISE569 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Bazaiha, Krasnoyarsk 55.951 92.784 Russia NEO105 Homo sapiens 500 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 NEO105 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA251 Homo sapiens 6900 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA251 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Eastern Settlement 60.99 -45.42 Greenland VK6 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK6 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Bodzia 52.703 18.887 Poland VK154 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK154 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Oxford 51.756 -1.257 United Kingdom VK143 Homo sapiens 1100 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK143 -Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA336 Homo sapiens 4100 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA336 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 Aschheim-Bajuwarenring 48.172 11.715 Germany A120 Homo sapiens 1400 10.1016/S1473-3099(13)70323-2 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA231474 SRS514388,SRS514389,SRS514393,SRS514395,SRS514397,SRS514398,SRS514399,SRS514400,SRS514401,SRS514402,SRS514403,SRS514404,SRS514423,SRS514424,SRS514425,SRS514426,SRS514427,SRS514429,SRS514430,SRS514431,SRS514435,SRS514436,SRS514437,SRS514438,SRS514439,SRS514440,SRS514441,SRS514442,SRS514507,SRS514506,SRS514505,SRS514444 -Wagner2014 2014 10.1016/S1473-3099(13)70323-2 Aschheim-Bajuwarenring 48.172 11.715 Germany A76 Homo sapiens 1400 10.1016/S1473-3099(13)70323-2 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA231474 SRS514391,SRS514392,SRS514432,SRS514443,SRS514508 -Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_11972 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259946 -Bos2011 2011 10.1038/nature10549 Abbey St. Mary Graces 51.508 -0.069 United Kingdom ES_6330 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259944 -Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_8124 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259947 -Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_8291 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259945 -Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS107 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020860 -Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS110 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020861 -Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS116 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020862 -Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS124 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020863 -Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS137 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020864 -PattersonRoss2018 2018 10.1371/journal.ppat.1006750 Basilica of St. Domenico Maggiore, Naples 40.848 14.254 Italy NASD24 Homo sapiens 400 10.1371/journal.ppat.1006750 virus Hepatitis B virus tissue chromosome GenBank consensus Unknown MG585269 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_10 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020211 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_11 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020212 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_14 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020215 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_20 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020221 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_34 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020226 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_35 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020227 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_36 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020228 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_37 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020229 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_38 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020230 -Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_41 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020231 -DeDios2020 2020 10.1016/j.meegid.2020.104209 Musées Royaux des Beaux-Arts de Belgique 50.842 4.358 Belgium Marat Homo sapiens 200 10.1016/j.meegid.2020.104209 eukaryota Malassezia restricta blood chromosome ENA raw PRJEB32319 ERS4278128,ERS4278129,ERS4278130 -DeDios2020 2020 10.1016/j.meegid.2020.104209 Musées Royaux des Beaux-Arts de Belgique 50.842 4.358 Belgium Marat Homo sapiens 200 10.1016/j.meegid.2020.104209 bacteria Cutibacterium acnes blood chromosome ENA raw PRJEB32319 ERS4278128,ERS4278129,ERS4278130 -Zhou2018 2018 10.1016/j.cub.2018.05.058 St. Olav's Cathedral 63.425 10.392 Norway SK152 Homo sapiens 800 10.1016/j.cub.2018.05.058 bacteria Salmonella enterica tooth chromosome UCPH ERDA raw E56xgi8CEl dentine_lib1,dentine_lib2,femur_lib1,new_lib1,new_lib2,pulp_lib1,whole_root_lib1,whole_root_lib2 -Sabin2020 2020 10.1186/s13059-020-02112-1 Lund Cathedral 55.704 13.193 Sweden Bishop Peder Winstrup Homo sapiens 300 10.1186/s13059-020-02112-1 bacteria Mycobacterium tuberculosis calcified nodule chromosome SRA raw PRJNA517266 SRS6462469 -Kay2014 2014 10.1128/mBio.01337-14 Geridu, Sardinia 40.78 8.574 Italy 2568 Homo sapiens 600 10.1128/mBio.01337-14 bacteria Brucella melitensis calcified nodule chromosome ENA raw PRJEB6045 ERS430636 -Devault2014 2014 10.1056/NEJMoa1308663 Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA 3090.13 Homo sapiens 100 10.1056/NEJMoa1308663 bacteria Vibrio cholerae intestine chromosome SRA raw PRJNA219007 SRS480102 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_121 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis bone chromosome ENA raw PRJEB7454 ERS563413,ERS563414,ERS563415 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_68 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis lung tissue chromosome ENA raw PRJEB7454 ERS563404,ERS563405,ERS563406 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_78 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis bone chromosome ENA raw PRJEB7454 ERS563407 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_28 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563385,ERS563386,ERS563387 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_25 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563382,ERS563383 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_80 Homo sapiens 100 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis thoracic segment of trunk chromosome ENA raw PRJEB7454 ERS563408 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_23 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563378,ERS563379 -Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_92 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis thoracic segment of trunk chromosome ENA raw PRJEB7454 ERS563409 -vanDorp2020 2020 10.1093/molbev/msz264 Sant Jaume d’Enveja 40.705 0.727 Spain Ebro-1944 Homo sapiens 100 10.1093/molbev/msz264 eukaryota Plasmodium vivax blood chromosome ENA raw PRJEB30878 ERS3037135,ERS3037137,ERS3037139,ERS3037136,ERS3037140,ERS3037138,ERS3037141 -Kerudin2019 2019 10.1016/j.jas.2019.105035 Hospital of St James and St Mary Magdalene 50.842 -0.759 United Kingdom C21 Homo sapiens 400 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908875 -Kerudin2019 2019 10.1016/j.jas.2019.105035 Hospital of St James and St Mary Magdalene 50.842 -0.759 United Kingdom C48 Homo sapiens 400 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908876 -Kerudin2019 2019 10.1016/j.jas.2019.105035 Raunds Furnells cemetary 52.349 -0.534 United Kingdom R5046 Homo sapiens 800 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908877 -Worobey2016 2016 10.1038/nature19827 San Francisco Cohort 37.77 -122.42 USA SF20 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704794 -Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC7 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704791 -Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC16 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704790 -Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC12 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704789 -Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC4 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704792 -Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA Patient0 (PZconservative040513) Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704787,KJ704788,KJ704797 -DeDios2019 2019 10.1099/mgen.0.000289 Sant Jaume d’Enveja 40.705 0.727 Spain Ebro-1944 Homo sapiens 100 10.1099/mgen.0.000289 eukaryota Plasmodium falciparum blood chromosome ENA raw PRJEB32165 ERS3369379,ERS3369380,ERS3369382,ERS3369383 -Schuenemann2011 2011 10.1073/pnas.1105107108 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES 1-5 Homo sapiens 600 10.1073/pnas.1105107108 bacteria Yersinia pestis tooth organelle GenBank consensus Unknown HE576987 -Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK01 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw,consensus PRJNA561155 SRS5298897 -Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK02 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298896 -Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK05 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298895 -Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK08 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298894 -Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK12 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus medical instrument chromosome SRA raw PRJNA561155 SRS5298893 -Namouchi2018 2018 10.1073/pnas.1812865115 Abbadia San Salvatore 42.88 11.676 Italy BSS31 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865269 -Namouchi2018 2018 10.1073/pnas.1812865115 Saint-Laurent-de-la-Cabrerisse 43.087 2.72 France SLC1006 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865271 -Namouchi2018 2018 10.1073/pnas.1812865115 St Nicolay and St Clement 59.904 10.765 Norway OSL1 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865270 -Namouchi2018 2018 10.1073/pnas.1812865115 Bergen op Zoom 51.494 4.287 Netherlands Ber45 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865268 -Namouchi2018 2018 10.1073/pnas.1812865115 Bergen op Zoom 51.494 4.287 Netherlands Ber37 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865267 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Sants Màrtirs Just i Pastor 41.382 2.178 Spain Barcelona_3031 Homo sapiens 600 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124787 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ust-Jerusalem necropolis 54.967 49.034 Russia Bolgar_2370 Homo sapiens 600 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124788 -Spyrou2016 2016 10.1016/j.chom.2016.05.012 “Marktplatz” Ellwangen 48.962 10.131 Germany Ellwangen 549_O Homo sapiens 400 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124790,ERS1124789 -Martin2013 2013 10.1038/ncomms3172 Audernade 50.86 3.63 Belgium Pi1845A Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258003 -Martin2013 2013 10.1038/ncomms3172 Unknown 51.52 -0.13 United Kingdom Pi1845B Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258004 -Martin2013 2013 10.1038/ncomms3172 Skårop 55.09 10.69 Denmark Pi1876 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258005 -Martin2013 2013 10.1038/ncomms3172 Stockholm 59.33 18.07 Sweden Pi1882 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258006 -Martin2013 2013 10.1038/ncomms3172 Unknown 50.11 8.65 Germany Pi1889 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258007 -Spyrou2019 2019 10.1038/s41467-019-12154-0 “Marktplatz” Ellwangen 48.962 10.131 Germany Ellwangen 549_O Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607398 -Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED030.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607393 -Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED028.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607392 -Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED034.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607394 -Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED024.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607391 -Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED038.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607395 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Domlinden 12 52.414 12.567 Germany BRA001.A0101 Homo sapiens 300 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607396 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Domlinden 12 52.414 12.567 Germany BRA003.A0101 Homo sapiens 300 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607397 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Laishevo III cemetery 55.401 49.549 Russia LAI009.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607399 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Laishevo III cemetery 55.401 49.549 Russia LAI010.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607400 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Kirchhof St. Johannis 48.05 10.868 Germany LBG002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607401 -Spyrou2019 2019 10.1038/s41467-019-12154-0 St. Leonhardi 48.717 11.495 Germany MAN008.B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607402 -Spyrou2019 2019 10.1038/s41467-019-12154-0 St. Leonhardi 48.717 11.495 Germany MAN015.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607403 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB005.A/B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607406 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB003.B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607404 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB004.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607405 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Augustinian Friary 52.202 0.12 United Kingdom NMS002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607408 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Augustinian Friary 52.202 0.12 United Kingdom NMS003.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607409 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Possenhofener Str. 3 47.995 11.339 Germany STA001.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607410 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN014.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607419 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN020.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607422 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN021.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607423 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN019.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607421 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN007.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607414 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607411 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN008.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607415 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN013.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607418 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN011.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607416 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN004.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607412 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN032.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607425 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN031.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607424 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN005.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607413 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN018.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607420 -Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN012.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607417 -Spyrou2019 2019 10.1038/s41467-019-12154-0 16 rue des Trente Six Ponts 43.592 1.446 France TRP002.A0101/02 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607426 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G34 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574242 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G154 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574227 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G404 / Jorgen_404 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574247 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G427 / Jorgen_427 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574249 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G507 / Jorgen_507 Homo sapiens 800 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574253 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G533 / Jorgen_533 Homo sapiens 800 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574254 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G722 / Jorgen_722 Homo sapiens 600 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574259 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G749 / Jorgen_749 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574262 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G1083 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574217 -KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G1149 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574219 -Majander2020 2020 10.1016/j.cub.2020.07.058 Holy Ghost Chapel, Turku 60.45 22.27 Finland CHS119 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum tooth chromosome ENA raw PRJEB35855 ERS4982024,ERS4982025,ERS4982023,ERS4982027,ERS4982028,ERS4982026,ERS4982029,ERS4982032,ERS4982033,ERS4982034,ERS4982035,ERS4982036,ERS4982037,ERS4982038,ERS4982039,ERS4982040,ERS4982041,ERS4982042,ERS4982043,ERS4982044,ERS4982045,ERS4982046,ERS4982047,ERS4982048,ERS4982049,ERS4982050,ERS4982052,ERS4982051,ERS4982030,ERS4982031 -Majander2020 2020 10.1016/j.cub.2020.07.058 Porvoo Dome cemetery, Porvoo 60.397 25.658 Finland PD28 Homo sapiens 200 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982084,ERS4982081,ERS4982082,ERS4982083 -Majander2020 2020 10.1016/j.cub.2020.07.058 St. Jacob’s cemetery, Tartu 58.38 26.71 Estonia SJ219 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982086,ERS4982087,ERS4982085,ERS4982089,ERS4982090,ERS4982088,ERS4982091,ERS4982092,ERS4982093,ERS4982094,ERS4982095,ERS4982096,ERS4982097,ERS4982098,ERS4982099,ERS4982100,ERS4982101,ERS4982102,ERS4982103,ERS4982104,ERS4982105,ERS4982106,ERS4982107,ERS4982108,ERS4982109,ERS4982110,ERS4982113,ERS4982112,ERS4982111 -Majander2020 2020 10.1016/j.cub.2020.07.058 Gertrude’s Infirmary, Kampen 52.55 5.91 Netherlands KM14-7 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982054,ERS4982053,ERS4982055,ERS4982056,ERS4982057,ERS4982058,ERS4982059,ERS4982060,ERS4982061,ERS4982062,ERS4982063,ERS4982064,ERS4982065,ERS4982066,ERS4982067,ERS4982068,ERS4982069,ERS4982070,ERS4982071,ERS4982072,ERS4982073,ERS4982074,ERS4982075,ERS4982076,ERS4982077,ERS4982078,ERS4982079,ERS4982080 -Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177500 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241528 -Yoshida2013 2013 10.7554/eLife.00731.002 Ireland (in Kew Royal Botanical Gardens herbarium) 53.0 -8.0 Ireland KM177513 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241529 -Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177497 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS788351 -Yoshida2013 2013 10.7554/eLife.00731.002 Ireland (in Kew Royal Botanical Gardens herbarium) 53.0 -8.0 Ireland KM177514 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241530 -Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177548 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241531 -Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182898 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241532 -Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177509 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241533 -Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182900 Solanum lycopersicum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241534 -Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Kew Royal Botanical Gardens herbarium) 51.0 10.0 Germany M-0182907 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241535 -Yoshida2013 2013 10.7554/eLife.00731.002 Wales (in Kew Royal Botanical Gardens herbarium) 52.3 -3.5 United Kingdom KM177517 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241536 -Yoshida2013 2013 10.7554/eLife.00731.002 USA (in Botanische Staatssammlung München herbarium) 40.0 -101.0 USA M-0182897 Solanum lycopersicum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241537 -Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182906 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241538 -Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182896 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241539 -Yoshida2013 2013 10.7554/eLife.00731.002 Austria (in Botanische Staatssammlung München herbarium) 47.5 14.0 Austria M-0182904 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241540 -Yoshida2013 2013 10.7554/eLife.00731.002 Canada (in Botanische Staatssammlung München herbarium) 58.0 -109.0 Canada M-0182903 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241541 -Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177512 Solanum tuberosum 100 10.7554/eLife.00731.003 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241542 -Muhlemann2020 2020 10.1126/science.aaw8977 Nabberör, Böda 57.244 17.059 Sweden VK382 Homo sapiens 1300 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540432 -Muhlemann2020 2020 10.1126/science.aaw8977 Lødingen,, Nordland 68.411 15.988 Norway VK388 Homo sapiens 1300 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540433 -Muhlemann2020 2020 10.1126/science.aaw8977 Gnezdovo 54.784 31.865 Russia VK470 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540435 -Muhlemann2020 2020 10.1126/science.aaw8977 Bårse ‘Tyvestensagern’ 55.125 11.951 Denmark VK281 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540431 -Muhlemann2020 2020 10.1126/science.aaw8977 St. John’s College, Oxford 51.756 -1.259 United Kingdom VK168 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus bone chromosome SRA reference_aligned PRJEB38129 ERS4540429 -Muhlemann2020 2020 10.1126/science.aaw8977 Sörby-Störlinge 56.81 16.735 Sweden VK533 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540437 -Muhlemann2020 2020 10.1126/science.aaw8977 Bodø 67.279 14.404 Norway VK515 Homo sapiens 1200 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540436 -Muhlemann2020 2020 10.1126/science.aaw8977 Gnezdovo 54.784 31.865 Russia VK255 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540430 -Muhlemann2020 2020 10.1126/science.aaw8977 Varzino 68.37 38.38 Russia FIN1 Homo sapiens 100 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540426 -Muhlemann2020 2020 10.1126/science.aaw8977 Khalas-Pugor, Salekhard 66.546 66.605 Russia KHA1 Homo sapiens 100 10.1126/science.aaw8977 virus Variola virus bone chromosome SRA reference_aligned PRJEB38129 ERS4540425 -Muhlemann2020 2020 10.1126/science.aaw8977 Forgalla skepp, Böda 57.244 17.059 Sweden VK443 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540434 -Muhlemann2020 2020 10.1126/science.aaw8977 Ljungbacka, Lockarp 55.532 13.032 Sweden VK108 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540427 -Muhlemann2020 2020 10.1126/science.aaw8977 Galgedil, Funen 55.524 10.386 Denmark VK138 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540428 -Mendum2014 2014 10.1186/1471-2164-15-270 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom Sk14 Homo sapiens 1000 10.1186/1471-2164-15-270 bacteria Mycobacterium leprae bone chromosome ENA raw PRJNA200950 SRS418847 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir el-Meleq 29.24 31.1 Egypt Abusir1630 Homo sapiens 2200 10.1038/ncomms15694 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 -Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir el-Meleq 29.24 31.1 Egypt Abusir1543 Homo sapiens 1900 10.1371/journal.pone.0060307 virus Hepatitis B virus tissue chromosome ENA raw PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 -Eerkens2018 2018 10.1016/j.ijpp.2018.05.001 CA-SCL-919, Santa Clara County 37.3 -121.8 USA 16 Homo sapiens 400 10.1016/j.ijpp.2018.05.001 bacteria Neisseria meningitidis dental calculus chromosome SRA raw PRJNA377320 SRS2006287 -Susat2020 2020 10.1038/s41598-020-71530-9 Mass grave 1, St. Gertrude's Cemetery, Riga 56.954 24.119 Latvia G488 Homo sapiens 400 10.1038/s41598-020-71530-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB36413 ERS4266556 -Susat2020 2020 10.1038/s41598-020-71530-9 Burial pit, St. Gertrude's Cemetery, Riga 56.954 24.119 Latvia G701 Homo sapiens 400 10.1038/s41598-020-71530-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB36413 ERS4266549 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18023_Japan_Edo_4 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212663 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18021_Japan_Edo_2 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212661 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18020_Japan_Edo_1 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212660 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Miyano 39.12 141.81 Japan A18018_Japan_Jomon_4 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212658 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Ikawazu 34.64 137.14 Japan A18016_Japan_Jomon_2 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212656 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18033_Japan_Edo_10 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212655 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18032_Japan_Edo_9 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212654 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18027_Japan_Edo_8 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212652 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18026_Japan_Edo_7 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212651 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18025_Japan_Edo_6 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212650 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.713 139.767 Japan A18024_Japan_Edo_5 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212649 -Eisenhofer2020 2020 10.1098/rstb.2019.0578 Miyano 39.12 141.81 Japan A18015_Japan_Jomon_1 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212648 -Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov1639 Homo sapiens 200 10.1098/rstb.2019.0569 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071778,ERS5071779,ERS5071780,ERS5071772 -Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov2033 Homo sapiens 200 10.1098/rstb.2019.0570 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071781,ERS5071782,ERS5071783,ERS5071773 -Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov2039 Homo sapiens 200 10.1098/rstb.2019.0571 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071784,ERS5071785,ERS5071786,ERS5071787,ERS5071774 -Morozova2020 2020 10.1098/rstb.2019.0569 Azov city, Rostov-on-Don 47.1 39.41 Russia Azov38 Homo sapiens 500 10.1098/rstb.2019.0572 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071788,ERS5071789,ERS5071790,ERS5071775 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdańsk ossuaries, Dominican Square 54.352 16.652 Poland Gdansk8 Homo sapiens 500 10.1098/rstb.2019.0573 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071791,ERS5071792,ERS5071793,ERS5071794,ERS5071776 -Morozova2020 2020 10.1098/rstb.2019.0569 Gdańsk ossuaries, Dominican Square 54.352 16.652 Poland Rat Rattus rattus 500 10.1098/rstb.2019.0574 bacteria Yersinia pestis bone chromosome ENA raw PRJEB35426 ERS5071795,ERS5071796,ERS5071797,ERS5071770,ERS5071771,ERS5071777 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 94A Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470993 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 94B Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470994 -Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 133 Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470995 -Ferrari2020 2020 10.1098/rstb.2019.0572 Hunterian Museum, Royal College of Surgeons, London 51.516 -0.116 United Kingdom RCSHC/P 328 Homo sapiens 200 10.1098/rstb.2019.0572 virus Variola virus tissue chromosome ENA raw PRJEB35140 ERS3935826,ERS3935827,ERS3935828,ERS3935829,ERS3935830,ERS3935831 -Williams2020 2020 10.1128/mra.00850-20 Kodiak Island Collection, National Museum of Natural History (Washington D.C.) 38.891 -77.026 USA 364459 Homo sapiens 100 10.1128/mra.00850-20 bacteria Stenotrophomonas maltophilia dental calculus chromosome SRA raw,binned_mag,consensus PRJNA643812 SRS6939171 -Williams2020 2020 10.1128/mra.00850-20 Medical Collection, American Museum of Natural History (New York) 40.781 -73.974 USA AMNH98137_Q01 Homo sapiens 100 10.1128/mra.00850-20 bacteria Acinetobacter baumannii dental calculus chromosome SRA raw,binned_mag,consensus PRJNA643812 SRS6939170 -Fotakis2020 2020 10.1098/rstb.2019.0584 Library site, Trondheim 63.431 10.401 Norway SK92 Homo sapiens 400 10.1098/rstb.2019.0584 bacteria Mycobacterium leprae dental calculus chromosome ENA raw PRJEB37995 ERS5113011 -Marciniak2016 2016 10.1016/j.cub.2016.10.016 Velia 40.158 15.159 Italy LV13 Homo sapiens 1800 10.1016/j.cub.2016.10.016 eukaryota Plasmodium falciparum tooth organelle SRA raw PRJNA348634 SRS1747845 -Marciniak2016 2016 10.1016/j.cub.2016.10.016 Vagnari 40.85 16.28 Italy LG20 Homo sapiens 1700 10.1016/j.cub.2016.10.016 eukaryota Plasmodium falciparum tooth organelle SRA raw PRJNA348634 SRS1747846 -Gelabert2016 2016 10.1073/pnas.1611017113 Sant Jaume d’Enveja, Ebro Delta 40.706 0.721 Spain CA, CM, POS Homo sapiens 100 10.1073/pnas.1611017113 eukaryota Plasmodium falciparum blood organelle SRA reference_aligned PRJNA338278 SRS1609867 -Gelabert2016 2016 10.1073/pnas.1611017113 Sant Jaume d’Enveja, Ebro Delta 40.706 0.721 Spain CA, CM, POS Homo sapiens 100 10.1073/pnas.1611017113 eukaryota Plasmodium vivax blood organelle SRA reference_aligned PRJNA338278 SRS1607662 -Taubenberger2005 2005 10.1038/nature04230 Armed Forces Institute of Pathology, Washington DC 38.975 -77.031 USA A/Brevig Mission/1/1918(H1N1) Homo sapiens 100 10.1073/pnas.96.4.1651 virus Influenza A virus lung tissue chromosome GenBank consensus Unknown DQ208309.1,DQ208310.1,DQ208311.1,AF116575.1,AY744935.1,AF250356.2,AY130766.1,AF333238.1 -Lugli2017 2017 10.1186/s40168-016-0221-y Hauslabjoch 46.773 10.837 Italy Iceman Intestine (B0621,C1824,C1825,B0625) Homo sapiens 5300 10.1126/science.aad2545 bacteria Clostridium perfringens digestive tract contents chromosome ENA raw PRJEB11511 ERS942272,ERS942281,ERS942282,ERS942276 -Lugli2017 2017 10.1186/s40168-016-0221-y Hauslabjoch 46.773 10.837 Italy Iceman Intestine (B0621,C1824,C1825,B0625) Homo sapiens 5300 10.1126/science.aad2545 bacteria Pseudomonas veronii digestive tract contents chromosome ENA raw PRJEB11511 ERS942272,ERS942281,ERS942282,ERS942276 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Cañada de La virgen 20.858 -100.928 Mexico CA_13 Homo sapiens 2500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288481 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Tabuco 20.959 -97.339 Mexico VE_42 Homo sapiens 3000 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288482 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_2417Q Homo sapiens 700 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288476 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_2417J Homo sapiens 2800 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7326368 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_333O Homo sapiens 2600 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288477 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Tepeticpac 19.348 -98.235 Mexico TLA_01 Homo sapiens 500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288484 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Tepeticpac 19.348 -98.235 Mexico TLA_22 Homo sapiens 500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288483 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN_194 Homo sapiens 400 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288487 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN_240 Homo sapiens 400 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288488 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Temple of Immaculate Conception 19.347 -99.158 Mexico CO_09 Homo sapiens 200 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288485 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Temple of Immaculate Conception 19.347 -99.158 Mexico CO_20 Homo sapiens 200 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288486 -BravoLopez2020 2020 10.1098/rstb.2019.0580 Ex College of San Ignacio of Loyola 20.592 -100.409 Mexico UAQG Homo sapiens 300 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288478 -Philips2020 2020 10.1186/s12864-020-06810-9 Masłomęcz 50.722 23.892 Poland PCA0088 Homo sapiens 1700 10.1186/s12864-020-06810-9 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA354503 SRS1815293 -Kilinc2021 2021 10.1126/sciadv.abc4587 Anosovo (Angara river, Irkutsk Oblast, Cis-Baikal) 54.665 103.232 Russia Anosovo-1 (irk050) Homo sapiens 4000 10.1126/sciadv.abc4587 bacteria Yersinia pestis tooth chromosome ENA reference_aligned PRJEB39378 ERS4827048 -Kilinc2021 2021 10.1126/sciadv.abc4587 Kamenka (Kolyma river, Yakutia, Far Eastern Federal District) 66.8 152.633333 Russia Kamenka-2 (yak023) Homo sapiens 3500 10.1126/sciadv.abc4587 bacteria Yersinia pestis tooth chromosome ENA reference_aligned PRJEB39378 ERS4827062 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1429 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335226 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1510 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335227 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1558 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335228 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1579 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335229 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1599 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335230 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1600 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335231 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1607 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335232 -Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1638 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335233 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR11 Homo sapiens 300 10.1016/j.isci.2021.102383 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB43291 ERS5823072 -SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR8 Homo sapiens 300 10.1016/j.isci.2021.102383 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB43291 ERS5823096 -Guellil2020 2020 10.1073/pnas.2009677117 Maist, Chechnya 42.691 45.332 Russia CHE1 Homo sapiens 200 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051705 -Guellil2020 2020 10.1073/pnas.2009677117 San Giovani in Fistola, Collalto Sabino 42.13 13.04 Italy COL001 Homo sapiens 600 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051706 -Guellil2020 2020 10.1073/pnas.2009677117 Pestbacken, Holje 56.283 14.516 Sweden PEB10 Homo sapiens 200 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051704 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN1 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051707 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN7 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051708 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN8 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051709 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN13 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051710 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN14 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051711 -Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN19 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051712 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Lushoto District -4.8 38.29 Tanzania Herb4 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008173 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown 0.22 6.58 Sao Tome and Principe Herb5 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008179 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Kitobola -5.36 14.51 Democratic Republic of the Congo Herb9 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008183 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Yangambi 0.8 24.45 Democratic Republic of the Congo MK003 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008154 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK011 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008163 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -6.36 34.89 Tanzania MK012 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008164 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Mikumi National Park -7.4 37.4 Tanzania MK014 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008166 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Tukpwo 4.4 25.8 Democratic Republic of the Congo MK015 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008167 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK016 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008168 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Kidatu -7.7 36.96 Tanzania MK017 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008169 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Kidatu -7.7 36.96 Tanzania MK019 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008171 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK020 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008172 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Mahenge -8.68 36.71 Tanzania MK023 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008175 -Danneels2021 2021 10.1016/j.cub.2021.03.049 Madanga -5.35 38.98 Tanzania MK025 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008177 -Susat2021 2021 10.1016/j.celrep.2021.109278 Riņņukalns 57.793 25.153 Latvia RV2039 Homo sapiens 5200 10.1007/s12520-020-01049-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB42185 ERS6638365 -DeDios2021 2021 10.1016/j.isci.2021.103021 La Sagrera (Sant Martí de Provençals), Barcelona 41.42 2.19 Spain F1691-1810 Homo sapiens 400 10.1016/j.isci.2021.103021 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB43276 ERS6464927 -Campos2021 2021 10.1371/journal.ppat.1009714 Phoenix -20.285 57.512 Mauritius HERB_1937 Citrus sp. 100 10.1371/journal.ppat.1009714 bacteria Xanthomonas citri leaf chromosome SRA raw PRJNA668001 SRS7491184 -GuzmanSolis2021 2021 10.7554/eLife.68612 Temple of Immaculate Conception 19.347 -99.158 Mexico COYC4 Homo sapiens 300 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864574 -GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN194 Homo sapiens 400 10.7554/eLife.68612 virus Hepatitis B virus tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864575 -GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN240 Homo sapiens 400 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864576 -GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJNC81 Homo sapiens 300 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864577 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM20 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000645,SRS9000646 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM90 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000648,SRS9000650 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM7 Homo sapiens 3100 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000651,SRS9000652 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM83 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000653,SRS9000656 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM11 Homo sapiens 3100 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000654,SRS9000655 -Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM64 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000647,SRS9000649 -Kocher2021 2021 10.1126/science.abi5658 Alto de Rodilla 42.419 -3.485 Spain ADR001 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597748 -Kocher2021 2021 10.1126/science.abi5658 Akbeit 48.937 74.759 Kazakhstan AKB003 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597749 -Kocher2021 2021 10.1126/science.abi5658 Alalakh 36.238 36.385 Turkey ALA098 Homo sapiens 3700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597750 -Kocher2021 2021 10.1126/science.abi5658 Alalakh 36.238 36.385 Turkey ALA110 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597751 -Kocher2021 2021 10.1126/science.abi5658 Kaps 40.867 43.717 Armenia ARM001 Homo sapiens 5500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597752 -Kocher2021 2021 10.1126/science.abi5658 Kaps 40.867 43.717 Armenia ARM0023 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597753 -Kocher2021 2021 10.1126/science.abi5658 Arslantepe 38.382 38.361 Turkey ART005 Homo sapiens 5700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597754 -Kocher2021 2021 10.1126/science.abi5658 Arslantepe 38.382 38.361 Turkey ART024 Homo sapiens 5400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597755 -Kocher2021 2021 10.1126/science.abi5658 Brandýs nad Labem 50.187 14.664 Czechia BNL005 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597756 -Kocher2021 2021 10.1126/science.abi5658 Boncuklu Hoyuk 37.752 32.865 Turkey BON020 Homo sapiens 10100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597757 -Kocher2021 2021 10.1126/science.abi5658 Bolshoy Oleni Ostrov 69.224 33.485 Russia BOO006 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597758 -Kocher2021 2021 10.1126/science.abi5658 Bolshoy Oleni Ostrov 69.224 33.485 Russia BOO008 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597759 -Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE008 Homo sapiens 1700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597760 -Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE026 Homo sapiens 2300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597761 -Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE028 Homo sapiens 2300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597762 -Kocher2021 2021 10.1126/science.abi5658 Carolinas II 22.985 -81.462 Cuba CAA002 Homo sapiens 1600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597763 -Kocher2021 2021 10.1126/science.abi5658 Canimar abajo 23.038 -81.497 Cuba CAO009 Homo sapiens 1400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597764 -Kocher2021 2021 10.1126/science.abi5658 Cueva de Chaves 42.215 -0.139 Spain CHA003 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597765 -Kocher2021 2021 10.1126/science.abi5658 Chotìn 47.809 18.224 Slovakia CHT001 Homo sapiens 2200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597766 -Kocher2021 2021 10.1126/science.abi5658 Cueva de las Lechuzas 38.646 -0.893 Spain CLL005 Homo sapiens 4900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597767 -Kocher2021 2021 10.1126/science.abi5658 Cuncaicha -15.33 -72.59 Peru CUN002 Homo sapiens 9100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597768 -Kocher2021 2021 10.1126/science.abi5658 Derenburg 51.87 10.91 Germany DER027 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597769 -Kocher2021 2021 10.1126/science.abi5658 Doggerland 53.0 2.54 Netherlands DOG007 Homo sapiens 9400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597770 -Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain ELT005 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597771 -Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain ELT006 Homo sapiens 5800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597772 -Kocher2021 2021 10.1126/science.abi5658 Gougenheim 48.7 7.57 France GGN005 Homo sapiens 5700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597773 -Kocher2021 2021 10.1126/science.abi5658 Gurgy Les Noisats 47.864 3.56 France GRG001 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597774 -Kocher2021 2021 10.1126/science.abi5658 Gurgy Les Noisats 47.864 3.56 France GRG036 Homo sapiens 6800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597775 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany HAL05 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597776 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany HAL15 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597777 -Kocher2021 2021 10.1126/science.abi5658 Hostivice-Palouky 50.08 14.281 Czechia HOP004 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597778 -Kocher2021 2021 10.1126/science.abi5658 Ölsund, Hälsingland 61.632 16.36 Sweden HSL001 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597779 -Kocher2021 2021 10.1126/science.abi5658 Vegachayoq Moqo, Huari -13.06 -74.2 Peru HUA056 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597780 -Kocher2021 2021 10.1126/science.abi5658 Vegachayoq Moqo, Huari -13.06 -74.2 Peru HUA063 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597781 -Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.65 35.65 Russia I0061 Homo sapiens 8300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597782 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I0100 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597783 -Kocher2021 2021 10.1126/science.abi5658 Esperstedt 51.42 11.68 Germany I0104 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597784 -Kocher2021 2021 10.1126/science.abi5658 Rothenschirmbach 51.45 11.54 Germany I0111 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597785 -Kocher2021 2021 10.1126/science.abi5658 Hinxton 52.08 0.18 United Kingdom I0157 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597786 -Kocher2021 2021 10.1126/science.abi5658 Hinxton 52.08 0.18 United Kingdom I0161 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597787 -Kocher2021 2021 10.1126/science.abi5658 Oberwiederstedt-Schrammhoehe 51.666 11.532 Germany I0162 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597788 -Kocher2021 2021 10.1126/science.abi5658 Oberwiederstedt-Schrammhoehe 51.666 11.532 Germany I0163 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597789 -Kocher2021 2021 10.1126/science.abi5658 Latsch, Vinschgau 46.64 10.859 Italy I0216 Homo sapiens 2700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597790 -Kocher2021 2021 10.1126/science.abi5658 Latsch, Vinschgau 46.64 10.859 Italy I0217 Homo sapiens 2700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597791 -Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain I0411 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597792 -Kocher2021 2021 10.1126/science.abi5658 Arroyal I 42.4 -3.75 Spain I0461 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597793 -Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0551 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597794 -Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0554 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597795 -Kocher2021 2021 10.1126/science.abi5658 Yunatsite 42.232 24.263 Bulgaria I0784 Homo sapiens 6300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597796 -Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0795 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597797 -Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0796 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597798 -Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0797 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597799 -Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0798 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597800 -Kocher2021 2021 10.1126/science.abi5658 Semikarakorsk, Donskoy 47.236 39.702 Russia I0960 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597801 -Kocher2021 2021 10.1126/science.abi5658 Huaca Pucllana -12.115 -77.034 Peru I0972 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597802 -Kocher2021 2021 10.1126/science.abi5658 Samtavro 41.851 44.719 Georgia I1321 Homo sapiens 1900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597803 -Kocher2021 2021 10.1126/science.abi5658 Verchnyaya Koban, North Ossetia 42.9 44.46 Russia I1344 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597804 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2005 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597805 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2006 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597806 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2017 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597807 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2020 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597808 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2027 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597809 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2031 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597810 -Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2032 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597811 -Kocher2021 2021 10.1126/science.abi5658 İkiztepe 41.614 35.871 Turkey IKI009 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597812 -Kocher2021 2021 10.1126/science.abi5658 Is Bittuleris 39.868 9.236 Italy ISB002 Homo sapiens 3700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597813 -Kocher2021 2021 10.1126/science.abi5658 Jazikovo 57.121 38.152 Russia JAZ001 Homo sapiens 7300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597814 -Kocher2021 2021 10.1126/science.abi5658 Karanaevskiy 55.639 58.297 Russia KAP002 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597815 -Kocher2021 2021 10.1126/science.abi5658 Kabardinka 43.826 42.717 Russia KBD002 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597816 -Kocher2021 2021 10.1126/science.abi5658 Kudachurt 43.354 43.722 Russia KDC001 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597817 -Kocher2021 2021 10.1126/science.abi5658 Kamid el-Loz 33.622 35.823 Lebanon KEL045 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597818 -Kocher2021 2021 10.1126/science.abi5658 Kilteasheen 54.007 -8.202 Ireland KIL044 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597819 -Kocher2021 2021 10.1126/science.abi5658 Kleinaitingen 48.218 10.846 Germany KLE031 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597820 -Kocher2021 2021 10.1126/science.abi5658 Krakauer Berg 51.755 11.727 Germany KRA001 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597821 -Kocher2021 2021 10.1126/science.abi5658 Krakauer Berg 51.755 11.727 Germany KRA010 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597822 -Kocher2021 2021 10.1126/science.abi5658 Kuelap -6.418 -77.924 Peru KUE033 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597823 -Kocher2021 2021 10.1126/science.abi5658 Khvalynsk 52.501 48.094 Russia KVK001 Homo sapiens 10300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597824 -Kocher2021 2021 10.1126/science.abi5658 Leubingen 51.206 11.183 Germany LEU065 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597825 -Kocher2021 2021 10.1126/science.abi5658 Loschbour rock shelter 49.77 6.24 Luxembourg Loschbour Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597826 -Kocher2021 2021 10.1126/science.abi5658 Machu Picchu -13.163 -72.546 Peru MAP007 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597827 -Kocher2021 2021 10.1126/science.abi5658 Mayachnyiy bugor 47.095 47.211 Russia MAY017 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597828 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB003 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597829 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB011 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597830 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB040 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597831 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB041 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597832 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIS002 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597833 -Kocher2021 2021 10.1126/science.abi5658 Maryinskaya 5 43.905 43.522 Russia MK5004 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597834 -Kocher2021 2021 10.1126/science.abi5658 Maryinskaya 5 43.905 43.522 Russia MK5009 Homo sapiens 4800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597835 -Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MKL025 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597836 -Kocher2021 2021 10.1126/science.abi5658 Malaya Ryazan' 53.224 49.315 Russia MLR005 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597837 -Kocher2021 2021 10.1126/science.abi5658 Minino II 59.382 39.396 Russia MN2003 Homo sapiens 10600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597838 -Kocher2021 2021 10.1126/science.abi5658 Kanaljorden, Motala 58.548 14.972 Sweden MOT001 Homo sapiens 7800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597839 -Kocher2021 2021 10.1126/science.abi5658 Malonne petit Ry 50.474 4.873 Belgium MPR001 Homo sapiens 10500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597840 -Kocher2021 2021 10.1126/science.abi5658 Murzihinskiy II tomb 55.735 51.65 Russia MUR007 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597841 -Kocher2021 2021 10.1126/science.abi5658 Nevinnomyskiy 3 44.735 41.939 Russia NV3001 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597842 -Kocher2021 2021 10.1126/science.abi5658 Oakington 52.26 0.061 United Kingdom OAI017 Homo sapiens 1500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597843 -Kocher2021 2021 10.1126/science.abi5658 Oberottmarshausen 48.233 10.861 Germany OOH025 Homo sapiens 3600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597844 -Kocher2021 2021 10.1126/science.abi5658 Orenburg 51.81 55.18 Russia ORE002 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597845 -Kocher2021 2021 10.1126/science.abi5658 Prague 8 - Ďáblice 50.148 14.485 Czechia PDA001 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597846 -Kocher2021 2021 10.1126/science.abi5658 Prague 8 - Ďáblice 50.148 14.485 Czechia PDA003 Homo sapiens 4200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597847 -Kocher2021 2021 10.1126/science.abi5658 Pendimoun 43.81 7.51 France PEN003 Homo sapiens 7400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597848 -Kocher2021 2021 10.1126/science.abi5658 Purun Llacta de Soloco -6.3 -77.701 Peru PLS004 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597849 -Kocher2021 2021 10.1126/science.abi5658 Peñón de la Zorra 38.645 -0.87 Spain PLZ001 Homo sapiens 3600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597850 -Kocher2021 2021 10.1126/science.abi5658 Quedlinburg 51.787 11.154 Germany QUE004 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597851 -Kocher2021 2021 10.1126/science.abi5658 Regensburg Minoritenweg 49.017 12.105 Germany RMI002 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597852 -Kocher2021 2021 10.1126/science.abi5658 Serra Crabiles (Sennori) 40.79 8.59 Italy SEC006 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597853 -Kocher2021 2021 10.1126/science.abi5658 Sedgeford 52.9 0.544 United Kingdom SED009 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597854 -Kocher2021 2021 10.1126/science.abi5658 Shagara 55.237 40.1 Russia SGR003 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597855 -Kocher2021 2021 10.1126/science.abi5658 Shagara 55.132 40.175 Russia SGR004 Homo sapiens 5000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597856 -Kocher2021 2021 10.1126/science.abi5658 Sheksovo II 56.528 40.179 Russia SHK001 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597857 -Kocher2021 2021 10.1126/science.abi5658 S'isteridolzu 40.624 8.636 Italy SID005 Homo sapiens 6100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597858 -Kocher2021 2021 10.1126/science.abi5658 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN005 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597859 -Kocher2021 2021 10.1126/science.abi5658 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN013 Homo sapiens 500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597860 -Kocher2021 2021 10.1126/science.abi5658 Stuttgart-Mühlhausen I 48.84 9.228 Germany SMH004 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597861 -Kocher2021 2021 10.1126/science.abi5658 St. Rombout's churchyard 51.029 4.479 Belgium STR144 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597862 -Kocher2021 2021 10.1126/science.abi5658 Su Asedazzu 39.417 9.236 Italy SUA002 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597863 -Kocher2021 2021 10.1126/science.abi5658 Su Asedazzu 39.417 9.236 Italy SUA007 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597864 -Kocher2021 2021 10.1126/science.abi5658 Trinitapoli 41.355 16.088 Italy TRI011 Homo sapiens 3300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597865 -Kocher2021 2021 10.1126/science.abi5658 Tutkaul 38.3 69.283 Tajikistan TTK002 Homo sapiens 8300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597866 -Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO011 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597867 -Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO024 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597868 -Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO033 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597869 -Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ061 Homo sapiens 6700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597870 -Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ075 Homo sapiens 7300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597871 -Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ081 Homo sapiens 8600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597872 -Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ099 Homo sapiens 6000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597873 -Kocher2021 2021 10.1126/science.abi5658 Varna 43.219 27.914 Bulgaria VAR021 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597874 -Kocher2021 2021 10.1126/science.abi5658 Vliněves 50.373 14.449 Czechia VLI016 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597875 -Kocher2021 2021 10.1126/science.abi5658 Vliněves 50.373 14.449 Czechia VLI060 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597876 -Kocher2021 2021 10.1126/science.abi5658 Vertaizon 45.774 3.287 France VTZ008 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597877 -Kocher2021 2021 10.1126/science.abi5658 Vertaizon 45.774 3.287 France VTZ011 Homo sapiens 6600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597878 -Kocher2021 2021 10.1126/science.abi5658 Wehringen-Hochfeld 48.247 10.801 Germany WEH008 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597879 -Kocher2021 2021 10.1126/science.abi5658 Wehringen-Hochfeld 48.247 10.801 Germany WEH009 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597880 -Kocher2021 2021 10.1126/science.abi5658 Wenigensömmern 51.174 11.136 Germany WSN010 Homo sapiens 420 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597881 -Kocher2021 2021 10.1126/science.abi5658 Wenigensömmern 51.174 11.136 Germany WSN012 Homo sapiens 4200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597882 -Kocher2021 2021 10.1126/science.abi5658 Yunatsite 42.23 24.26 Bulgaria YUN048 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597883 -Kocher2021 2021 10.1126/science.abi5658 Zweisimmen Kirchgasse 46.554 7.372 Switzerland ZWE008 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597884 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Dereivka I 48.91 33.76 Ukraine I5884 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777163 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Vlineves 50.373 14.449 Czechia VLI092 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777164 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Krasnogvardeyskoe 45.825 41.582 Russia KNK001 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777165 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Großstorkwitz 51.189 12.267 Germany GRS004 Homo sapiens 4100 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777166 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Hostivice-Palouky 50.08 14.281 Czechia HOP001 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777167 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Hostivice-Palouky 50.08 14.281 Czechia HOP004 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777168 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kaluzhnyy 1 44.848 42.219 Russia KLZ001 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777169 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Chociwel 50.796 17.094 Poland CHC004 Homo sapiens 3600 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777170 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kleinaitingen 48.218 10.846 Germany KLE031 Homo sapiens 3500 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777171 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Mikulovice 49.992 15.777 Czechia MIB054 Homo sapiens 3600 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777172,ERS10777173,ERS10777174 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kleinaitingen 48.218 10.846 Germany KLE048 Homo sapiens 3400 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777175 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Oberottmarshausen 48.233 10.861 Germany OOH003 Homo sapiens 3300 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777176 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Dolmen “El Sotillo” 42.573 -2.621 Spain I2470 Homo sapiens 3100 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777177 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Arbulag sum, Khövsgöl 49.65 99.72 Mongolia ARS007 Homo sapiens 3000 10.1073/pnas.1813608115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777178 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kyzyl 48.278 75.356 Kazakhstan KZL002 Homo sapiens 2500 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777179 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Velešovice 49.178 16.848 Czechia VEL003 Homo sapiens 4000 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777180 -AndradesValtuena2022 2022 10.1073/pnas.2116722119 Grushevskoe 45.063 41.54 Russia GRH001 Homo sapiens 2700 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777181 -Granehall2021 2021 10.1186/s40168-021-01132-8 Isarco valley, Bressanone Elvas necropoli 17/Brixen Elvas 46.73 11.67 Italy 2102 Homo sapiens 1300 10.1016/j.quaint.2013.07.052 archaea Methanobrevibacter oralis dental calculus chromosome ENA raw PRJEB43389 ERS6205401 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Studzenka 53.585 30.029 Belarus BEL024 Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825982 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Nonneseter, Bergen 60.39 5.333 Norway Bergen Homo sapiens 700 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826036,SRS9826037,SRS9826038 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Church End, Cherry Hinton, Cambridge 52.196 0.174 United Kingdom CHRY023 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826045,SRS9825983 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Church End, Cherry Hinton, Cambridge 52.196 0.174 United Kingdom CHRY044 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826047 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Barrejo, Cordiñanes de Valdeón, León 43.167 -4.903 Spain COR_XVIII Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826000,SRS9826002 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI006 Homo sapiens 1400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826051 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of St John the Evangelist, Cambridge 52.207 0.118 United Kingdom JDS097 Homo sapiens 700 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826001 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Kirk Hill, St Andrews 56.339 -2.785 United Kingdom KirkHill Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825996,SRS9825997,SRS9825998 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Valle da Gafaria, Lagos 37.098 -8.674 Portugal PAVd09_I.5 Homo sapiens 600 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826040,SRS9826041 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 St. Petersburg 59.9 30.3 Russia R7546-671 Homo sapiens 100 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826003,SRS9826004,SRS9826044 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF101 Homo sapiens 1000 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826022,SRS9826023 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF11 Homo sapiens 200 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826014,SRS9826015 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF21 Homo sapiens 400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826017,SRS9826018 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF25 Homo sapiens 500 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826019,SRS9826020 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF700 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825988,SRS9825989 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF703 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9825992,SRS9825993 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF8 Homo sapiens 400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826012,SRS9826013 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF800 Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826024,SRS9825995 -Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF803 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826029,SRS9826030 -Jager2022 2022 10.1016/j.tube.2022.102181 Dominican church of Vác 47.777 19.127 Hungary body_210 Homo sapiens 200 10.1016/j.tube.2022.102181 bacteria Mycobacterium tuberculosis bone chromosome SRA raw PRJNA795622 SRS11554883 -Rieux2021 2021 10.1038/s41598-021-00518-w Bambari 5.766 20.661 Central African Republic P04808771 Manihot glaziovii 100 10.1038/s41598-021-00518-w virus African cassava mosaic virus leaf chromosome SRA raw PRJNA698751 SRS8172159 -Guellil2021 2021 10.1038/s41598-021-98214-2 Lazaretto dell’Osservanza, Imola 44.349 11.707 Italy IMO2 Homo sapiens 300 10.1038/s41598-021-98214-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27822 ERS8555205,ERS8555208,ERS8555209,ERS8555210,ERS8555211 -Guellil2022 2022 10.1186/s13059-021-02580-z Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI064 Homo sapiens 1500 10.1186/s13059-021-02580-z bacteria Haemophilus influenzae tooth chromosome ENA raw PRJEB45013 ERS8968539 -Guellil2022 2022 10.1186/s13059-021-02580-z Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI064 Homo sapiens 1500 10.1186/s13059-021-02580-z bacteria Yersinia pestis tooth chromosome ENA raw PRJEB45013 ERS8968539 -Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK001 (176/4; Grave 19/20) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205112 -Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK003 (176/7; Grave 28/29) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205113 -Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK007 (5559/2; Grave 9) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205114 -Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC009 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB52494 ERS11891570 -Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC068 Homo sapiens 4200 10.1016/j.cub.2022.06.094 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB52494 ERS11891571 -Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC004 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB52494 ERS11891572 -Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC040 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB52494 ERS11891573 -Vagene2022 2022 10.1038/s41467-022-28562-8 Moquegua, M6-Estuquiña -17.199 -70.943 Peru 82 Homo sapiens 700 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049946 -Vagene2022 2022 10.1038/s41467-022-28562-8 Las Delicias, Bogotá 4.601 -74.146 Colombia 281 Homo sapiens 700 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049948 -Vagene2022 2022 10.1038/s41467-022-28562-8 Candelaria La Nueva, Bogotá 4.57 -74.149 Colombia 386 Homo sapiens 500 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049947 -Guellil2022b 2022 10.1126/sciadv.abo4435 Hospital of St John the Evangelist, Cambridge 52.207 0.118 United Kingdom JDS005 Homo sapiens 600 10.1126/sciadv.abo4435 virus Human alphaherpesvirus 1 tooth chromosome ENA raw PRJEB46097 ERS12438280 -Guellil2022b 2022 10.1126/sciadv.abo4435 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI111 Homo sapiens 1500 10.1126/sciadv.abo4435 virus Human alphaherpesvirus 1 tooth chromosome ENA raw PRJEB46097 ERS12438281 -Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Klebsiella pneumoniae dental calculus chromosome SRA raw PRJNA851947 SRS13524932 -Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Acinetobacter nosocomialis dental calculus chromosome SRA raw PRJNA851947 SRS13524932 -Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Acinetobacter junii dental calculus chromosome SRA raw PRJNA851947 SRS13524932 -Long2022 2022 10.1038/s42003-022-03527-1 Basilica of St. Domenico Maggiore, Naples 40.848 14.254 Italy NASD1 Homo sapiens 400 10.1038/s42003-022-03527-1 bacteria Escherichia coli calcified nodule chromosome SRA raw PRJNA810725 SRS12115743 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Fermo, Marche 43.16 13.71 Italy Fer.T75 Homo sapiens 4400 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653538 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Ripatetta, Lucera, Foggia 41.3 15.2 Italy Rip.USD618 Homo sapiens 6100 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653590 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Ripatetta, Lucera, Foggia 41.3 15.2 Italy Rip.USD628 Homo sapiens 6100 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653591 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Bandita San Pantaleo, Tarquinia, Latium 42.25 11.75 Italy Tar.T71 Homo sapiens 4700 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653602 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Torre de Rubeis, Troia 41.22 15.18 Italy TR177 Homo sapiens 5200 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653605 -Quagliariello2022 2022 10.1038/s41467-022-34416-0 Passo di Corvo, Amendola plain 41.553 15.611 Italy PC-T5 Homo sapiens 7400 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653578 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G78T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tooth chromosome ENA raw PRJEB49149 ERS9069028 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G79T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tissue chromosome ENA raw PRJEB49149 ERS9069039 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G27T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tooth chromosome ENA raw PRJEB49149 ERS9069033 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tissue chromosome ENA raw PRJEB49149 ERS9069041 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G31T Homo sapiens 1200 10.1186/s13059-022-02806-8 virus Variola virus tissue chromosome ENA raw PRJEB49149 ERS9069030 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 bacteria Mycobacterium leprae tissue chromosome ENA raw PRJEB49149 ERS9069041 -Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Parvovirus B19 tissue chromosome ENA raw PRJEB49149 ERS9069041 -Braun2020 2020 10.3390/microorganisms8020298 Chemnitz, Sachsen 50.83 12.92 Germany Chemnitz 1878 (M-0290509) Bovidae 140 10.3390/microorganisms8020298 bacteria Bacillus anthracis blood chromosome SRA raw PRJNA309927 SRS5865127 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Hågerup , Faaborg-Midtfyn Municipality 55.17 10.35 Denmark A19 x21 Homo sapiens 800 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579972 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Faldborg, Viborg Municipality 56.45 9.40 Denmark Gr GCx15 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579984 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G.25A Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579986 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 16 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16580002 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G207 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579991 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 861 x1035 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579973 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Faldborg, Viborg Municipality 56.45 9.40 Denmark ID 319 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579981 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 25B x98 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579982 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Sejet, Horsens Municipality 55.81 9.92 Denmark A146x3011 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579983 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Tirup, Horsens Municipality 55.86 9.81 Denmark G371 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579985 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Lindegården, Esbjerg Municipality 55.32 8.78 Denmark x1265 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579987 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ole Wormsgade, Horsens Municipality 55.86 9.86 Denmark x1155 A1155 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16580001 -Eaton2023 2023 10.1016/j.cub.2023.01.064 Ole Wormsgade, Horsens Municipality 55.86 9.86 Denmark A1480 x1480 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579988 -Rifkin2023 2023 10.1038/s42003-023-04582-y Ballito Bay -29.53 31.21 South Africa BBayA Homo sapiens 1900 10.1038/s42003-023-04582-y bacteria Rickettsia felis tissue chromosome SRA raw PRJNA930765 SRS16665771 -Sarhan2023 2023 10.1186/s12915-022-01509-7 Barfüsserkirche/Franciscan church of Basel 47.554 7.589 Switzerland 3045 Homo sapiens 200 10.1186/s12915-022-01509-7 bacteria Mycolicibacterium sp. brain chromosome ENA raw PRJEB44723 ERS10216488 -Swali2023 2023 10.1038/s41467-023-38393-w Charterhouse Warren, Mendip Hills, Somerset 51.299 -2.715 United Kingdom C10091 Homo sapiens 4000 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14891340 -Swali2023 2023 10.1038/s41467-023-38393-w Charterhouse Warren, Mendip Hills, Somerset 51.299 -2.715 United Kingdom C10098 Homo sapiens 4000 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14891341,ERS14891342 -Swali2023 2023 10.1038/s41467-023-38393-w Levens Deer Park ring cairn, Leven, Cumbria 54.268 -2.761 United Kingdom C10928 Homo sapiens 3900 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14909714,ERS14891343 -Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ75 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555610,ERS14555611,ERS14555612,ERS14555613,ERS14555614,ERS14555615,ERS14555616,ERS14555617 -Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ46 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555595,ERS14555596,ERS14555597,ERS14555598,ERS14555599,ERS14555600,ERS14555601,ERS14555602,ERS14555603,ERS14555604 -Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ38 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233,PRJEB59234 ERS14555592,ERS14555591,ERS14555590,ERS14555589,ERS14555588,ERS14555587 -Clavel2023 2023 10.1016/j.isci.2023.106787 Hôtel-Dieu Saint-Jean-Baptiste, Amiens 49.898 2.299 France AMIENS268 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555669,ERS14555670,ERS14555671 -Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY1015 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555624,ERS14555625,ERS14555626 -Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY1028 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555627,ERS14555628 -Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY3030 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555635,ERS14555636 -Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR8 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823096 -Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR11 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823072 -Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR27 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823086,ERS14555637,ERS14555638 -Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8723 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555652,ERS14555653,ERS14555654 -Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8833 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555642 -Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8962 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555651 -Neumann2023 2023 10.1553/archaeologia107 Drasenhofen 48.758 16.651 Austria DSH008 Homo sapiens 3900 10.1553/archaeologia107 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61070 ERS15547237,ERS15547235 -Neumann2023 2023 10.1553/archaeologia107 Drasenhofen 48.758 16.651 Austria DSH025 Homo sapiens 3900 10.1553/archaeologia107 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61070 ERS15547238,ERS15547236 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 Sct. Trinitatis/Drotten,Viborg 56.45 9.4 Denmark X52 Homo sapiens 500 10.1098/rspb.2023.0622 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB60595 ERS14773586 -Bonczarowska2023 2023 10.1098/rspb.2023.0622 Sejet Ødekirkegård 55.816 9.925 Denmark X3003 Homo sapiens 400 10.1098/rspb.2023.0622 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB60595 ERS14773585 -Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA004 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884856,ERS14884857,ERS14884858,ERS14884859,ERS14884860 -Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA008 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884861 -Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA018 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884862 -Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA028 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884863 -Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA032 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884864 -Long2023 2023 10.1371/journal.ppat.1011538 Convento del Beato Sante, Mombaroccio, Pesaro e Urbino 43.789 12.861 Italy Sante Brancorsini Homo sapiens 600 10.1371/journal.ppat.1011538 bacteria Brucella melitensis kidney stone chromosome SRA raw PRJNA966239 SRS17532534 -Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1845 Citrus aurantiifolia 200 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248955 -Campos2023 2023 10.1038/s41467-023-39950-z Khasi hills 25.58 91.63 India HERB_1852 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248956 -Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1854 Citrus aurantiifolia 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248959 -Campos2023 2023 10.1038/s41467-023-39950-z Bangladesh 24 90 Bangladesh HERB_1859 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248960 -Campos2023 2023 10.1038/s41467-023-39950-z India 22 79 India HERB_1865 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248961 -Campos2023 2023 10.1038/s41467-023-39950-z Luzon 16.5 122.2 Philippines HERB_1884 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248962 -Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1911 Citrus aurantiifolia 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248963 -Campos2023 2023 10.1038/s41467-023-39950-z Philippines 15 120 Philippines HERB_1915 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248964 -Campos2023 2023 10.1038/s41467-023-39950-z Yunnan 24.55 101.45 China HERB_1922 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248965 -Campos2023 2023 10.1038/s41467-023-39950-z Tlofofo 13.33 144.73 Guam HERB_1946 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248966 -Campos2023 2023 10.1038/s41467-023-39950-z Sanichare 26.67 88.02 Nepal HERB_1963 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248957 -Campos2023 2023 10.1038/s41467-023-39950-z Mauritius -20.3 57.6 Mauritius HERB_1974 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248958 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji Shell Mound 37.87 140.91 Japan Sanganji-A1-Tooth Homo sapiens 3000 10.1038/jhg.2016.110 bacteria Clostridium tetani tooth chromosome SRA raw PRJDB4223 DRS021185 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji Shell Mound 37.87 140.91 Japan Sanganji-A2-Tooth Homo sapiens 3000 10.1038/jhg.2016.110 bacteria Clostridium tetani tooth chromosome SRA raw PRJDB4223 DRS021186 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir Rifeh Cemetery 27.097 31.207 Egypt Deir-Rifeh-KNIII-Tooth Homo sapiens 3800 10.1016/j.jasrep.2017.12.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB20294 ERS1647163 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir Rifeh Cemetery 27.097 31.207 Egypt Deir-Rifeh-KNII-Tooth Homo sapiens 3800 10.1016/j.jasrep.2017.12.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB20294 ERS1660772 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Haunstetten Unterer Talweg 85 48.318 10.891 Germany Augsburg-Tooth Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB19335 ERS1892067 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-011-Tooth Homo sapiens 1200 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906197 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-004-Tooth Homo sapiens 1200 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906198 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gran Canaria 27.92 -15.547 Spain GranCanaria-005-Tooth Homo sapiens 1000 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906199 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gran Canaria 27.92 -15.547 Spain GranCanaria-008-Tooth Homo sapiens 1000 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906202 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-012-Tooth Homo sapiens 1300 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906203 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-013-Tooth Homo sapiens 1300 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906204 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Teposcolula-Yucundaa; Mixteca Alta region, Oaxaca 17.502 -97.467 Mexico Tepos_35-Tooth Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB23438 ERS2020227 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva de los Lagos 41.962 -1.993 Spain Cueva_de_los_Lagos-Tooth Homo sapiens 4000 10.1073/pnas.1717762115 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB23467 ERS2059523 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Yámana 54.933 -67.616 Chile Yámana-Tooth Homo sapiens 800 10.1186/s40168-016-0221-y bacteria Clostridium tetani tooth chromosome ENA raw PRJEB24629 ERS2160137 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Vác 47.784 19.135 Hungary Vác-Mummy-Tissue Homo sapiens 200 10.1038/ncomms7717 bacteria Clostridium tetani tissue chromosome ENA raw PRJEB7454 ERS563409 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Maderas Enco -18.478 -70.312 Chile Chinchorro-Mummy-Bone Homo sapiens 200 10.1126/science.aab3884 bacteria Clostridium tetani bone chromosome ENA raw PRJEB9733 ERS793932 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Piedra Gorda 23.6 -109.6 Mexico Pericues-BC28-Bone Homo sapiens 550 10.1126/science.aab3884 bacteria Clostridium tetani bone chromosome ENA raw PRJEB9733 ERS793942 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 l’Observance in Marseille 43.296 5.369 France Marseille-Tooth Homo sapiens 200 10.7554/eLife.12994 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB12163 ERS1020860 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Saints Màrtirs Just i Pastor, Barcelona 41.387 2.168 Spain Barcelona-3031-Tooth Homo sapiens 1400 10.1016/j.chom.2016.05.012 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB13664 ERS1124787 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Saint-Laurent-de-la-Cabrerisse 43.084 2.7 France SLC-France-Tooth Homo sapiens 1300 10.1073/pnas.1812865115 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB24499 ERS2865271 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karlova, Tartu 58.371 26.732 Estonia Karolva-Tooth Homo sapiens 4200 10.1098/rspb.2019.1528 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB32786 ERS3568107 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1655-Tooth Homo sapiens 3100 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635957 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1595-Tooth Homo sapiens 2900 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635963 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1668-Tooth Homo sapiens 2200 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635986,ERS3636003 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1671-Tooth Homo sapiens 2100 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3636004 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1607-Tooth Homo sapiens 1900 10.1186/s12915-020-00839-8 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3636032 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi site, Pingan county, Qinghai province 36.5 102.108 China Dacaozi-Tooth Homo sapiens 1900 10.1371/journal.pone.0060307 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB36297 ERS4255307 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga 56.95 24.121 Latvia Riga_Cemetery-Tooth Homo sapiens 300 10.1038/s41598-020-71530-9 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB36413 ERS4266549 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.476 -76.016 Peru Chincha-UC12-12-Tooth Homo sapiens 400 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421181 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.476 -76.016 Peru Chincha-UC12-24-Tooth Homo sapiens 400 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421183 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.477 -76.025 Peru Chincha-UC8-8168-Tooth Homo sapiens 300 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421185 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chiribaya Alta, Cemetery 1 -17.635 -71.293 Peru Chiribaya_Alta-Bone Homo sapiens 800 10.1038/nature13591 bacteria Clostridium tetani bone chromosome SRA raw PRJNA244165 SRS591994 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 El Yaral, Cemetery 2 -17.149 -70.924 Peru El_Yaral-Bone Homo sapiens 700 10.1038/nature13591 bacteria Clostridium tetani bone chromosome SRA raw PRJNA244165 SRS592075 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Laguna de los Condores -6.848 -77.698 Peru Peru-NA40-Bone Homo sapiens 1100 10.1016/j.ajhg.2013.10.002 bacteria Clostridium tetani bone chromosome SRA raw PRJNA246597 SRS620293 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Laguna de los Condores -6.848 -77.698 Peru Peru-NA42-Bone Homo sapiens 1100 10.1016/j.ajhg.2013.10.002 bacteria Clostridium tetani bone chromosome SRA raw PRJNA246597 SRS620295 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo Bonito, New Mexico 36.06 -107.961 USA Pueblo_Bonito-Tooth Homo sapiens 900 10.1371/journal.pone.0060307 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA353635 SRS1853899 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gniezno, Wielkopolska 52.54 17.59 Poland Gniezno-Tooth Homo sapiens 1000 10.1093/gigascience/gix044 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA354503 SRS1815300 -Hodgkins2023 2023 10.1038/s41467-023-41174-0 Punta Candelero 18.091 -65.789 Puerto Rico Punta_Candelero-Tooth Homo sapiens 1100 10.1093/molbev/msz267 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA557308 SRS5212084 -Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1541 Homo sapiens 2000 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463028 -Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1557 Homo sapiens 2000 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463030 -Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1390 Homo sapiens 2300 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463029 -Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1540 Homo sapiens 1800 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463027 -Rozwalak2024 2024 10.1038/s41467-023-44370-0 Cueva de los Muertos Chiquitos (Zape) 25.771 -105.786 Mexico Zape3 Homo sapiens 1300 10.1038/s41586-021-03532-0 virus Mushuvirus mushu palaeofaeces chromosome GenBank assembly PRJNA561510 BK063464 -Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH2-F Homo sapiens 3800 10.1093/molbev/msae017 bacteria Tannerella forsythia tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977755 -Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH2-B Homo sapiens 3800 10.1093/molbev/msae017 bacteria Streptococcus mutans tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977754 -Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH1-E Homo sapiens 3800 10.1093/molbev/msae017 bacteria Tannerella forsythia tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977753 -Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H50_1 Homo sapiens 600 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486703 -Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H80_1 Homo sapiens 900 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486681 -Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H94_1 Homo sapiens 700 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486688 -Urban2024 2024 10.1016/j.cub.2024.04.006 Staple Gardens, Winchester 51.064 -1.317 United Kingdom SGW_S3_1 Sciurus vulgaris 1000 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA1021938 SRS20486690 -Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM86 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135916 -Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY19 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135917 -Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM12 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135918 -Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM16 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135919 -Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM18 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135920 -Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM23 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135921 -Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM31 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135922 -Sun2024 2024 10.1038/s41467-024-47358-6 NanYang 39.07 115.93 China NYM8 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135923 -Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT7 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135924 -Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT19 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135925 -Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT24 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135926 -Sun2024 2024 10.1038/s41467-024-47358-6 TaoJiaZhai 36.9 101.66 China TJZM25-2 Homo sapiens 1765 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135927 -Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM47 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135928 -Sun2024 2024 10.1038/s41467-024-47358-6 Derestuj 50.6 106.12 Russia XN12 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135929 -Sun2024 2024 10.1038/s41467-024-47358-6 XingFuLinDai 34.35 108.95 China XFLDM173 Homo sapiens 800 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135930 -Sun2024 2024 10.1038/s41467-024-47358-6 LongTouShan 43.07 118.48 China 91KLH18 Homo sapiens 2700 10.1038/s41467-020-16557-2 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135931 -Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM18 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135932 -Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM48 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135933 -Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM97 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135934 -Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM101 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135935 -Sun2024 2024 10.1038/s41467-024-47358-6 NiuHeLiang 41.25 119.41 China 96NVZIM6 Homo sapiens 5000 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135946 -Sun2024 2024 10.1038/s41467-024-47358-6 HengShui 35.5 111.58 China JHM2098 Homo sapiens 2500 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135947 -Sun2024 2024 10.1038/s41467-024-47358-6 TianTaiJie 37.88 112.57 China SBSM101 Homo sapiens 1500 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135948 -Sun2024 2024 10.1038/s41467-024-47358-6 HongHe 47.12 123.61 China HHM29 Homo sapiens 400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135949 -Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 98JJLM9 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135936 -Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 95JJLM34 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135937 -Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 95JJLM51 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135938 -Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY12 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135939 -Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY17 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135940 -Sun2024 2024 10.1038/s41467-024-47358-6 QiLangShan 41.06 113.01 China ZQM16 Homo sapiens 1600 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135941 -Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM20 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135942 -Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM46 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135943 -Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM125 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135944 -Sun2024 2024 10.1038/s41467-024-47358-6 BeiFang 37.13 81.61 China 11KBM13 Homo sapiens 3400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135945 -Lebrasseur2024 2024 10.1093/ve/vead087 Kamennyi Ambar 5 52.833 60.367 Russia UR17x29 Equus caballus 3800 10.1038/s41586-021-04018-9 virus Equid herpesvirus 4 bone chromosome ENA raw PRJEB44430 ERS7256200 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769380 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769381 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769382 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769383 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769380 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769381 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769382 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769383 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769380 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769381 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769382 -White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769383 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_1 Homo sapiens 5200 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529513 -Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_2 Homo sapiens 5100 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529514 -Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1385 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164983 -Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2272 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164984 -Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1984 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164985 -Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1986 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164986 -Fiddaman2023 2023 10.1126/science.adg2238 Bard-e Mar (Bem), Kurdistan 35.161 46.370 Iran OL2178 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164987 -Fiddaman2023 2023 10.1126/science.adg2238 Strasbourg Rue de Lucerne - Rue du Jeu de Paume 48.578 7.757 France OL1936 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164988 -Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1389 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164989 -Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1987 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164990 -Fiddaman2023 2023 10.1126/science.adg2238 Andlau 48.388 7.414 France OL1934 Gallus gallus 900 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164991 -Fiddaman2023 2023 10.1126/science.adg2238 Elabuga hillfort 55.746 52.032 Russia OL1599 Gallus gallus 300 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164992 -Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2268 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164993 -Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164994 -Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995 -Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996 -Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997 -Hammerle2024 2024 10.1038/s41598-024-80780-w Angola -12 18 Angola ZMB_Mam_11638 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101083 -Hammerle2024 2024 10.1038/s41598-024-80780-w W-Cameroon (Sanaga) 4.51 11.43 Cameroon ZMB_Mam_83617 Pan troglodytes 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101086 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0545 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100927 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0546 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100929 -Hammerle2024 2024 10.1038/s41598-024-80780-w Rotterdam Zoo 51.927 4.452 Netherlands ZFMK_MAM1965-0547 Pongo abelii 100 10.1038/s41598-024-80780-w virus Monkeypox virus tooth chromosome SRA raw PRJEB75038 ERS19100926 -Hammerle2024 2024 10.1038/s41598-024-80780-w South Cameroon 4 12 Cameroon 96550 Gorilla gorilla 100 10.1038/s41598-024-80780-w virus Hepatitis B virus tooth chromosome SRA raw PRJEB75038 ERS19101005 From e5cba43dc68143b8371f9af4d9ca7a30f59acceb Mon Sep 17 00:00:00 2001 From: aidaanva Date: Fri, 7 Feb 2025 16:42:51 +0100 Subject: [PATCH 61/67] reverted the CHANGELOG --- CHANGELOG.md | 624 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 624 insertions(+) create mode 100644 CHANGELOG.md diff --git a/CHANGELOG.md b/CHANGELOG.md new file mode 100644 index 000000000..79b0ba0cb --- /dev/null +++ b/CHANGELOG.md @@ -0,0 +1,624 @@ +# Changelog + +All notable changes to this project will be documented in this file. + +The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), +and this project follows to [Calendar Versioning](https://calver.org/). + +## v25.03: Historic Centre of Cordoba [Unreleased] + +### Added + +#### Ancient Metagenome: Host Associated + +#### Ancient Single Genome: Host Associated +- Susat 2021 10.1016/j.celrep.2021.109278 (C14 added by @aidaanva) + +- C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad) +- Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) +- C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) +- C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) + + +#### Ancient Metagenome: Environmental + +### Changed + +### Removed + +## v24.12: Old Town of Corfu + +### Added + +#### Ancient Metagenome: Host Associated + +#### Ancient Single Genome: Host Associated + +- Fiddaman 2023 10.1126/science.adg2238 (added by @aidaanva) +- Susat 2024 10.1038/s42003-024-06676-7 (added by @MagdalenaHC) + +#### Ancient Metagenome: Environmental + +### Changed + +- Bonczarowska2023: Fixed library type (actually half-UDG, despite paper reporting non-UDG) 10.1098/rspb.2023.0622 (fixed by @marcel-keller) + +### Removed + +## v24.09: Medieval Town of Toruń + +### Added + +#### Ancient Metagenome: Host Associated + +- Austin 2024 10.1038/s41598-024-64818-7 (added by @alexhbnr and @jfy133) +- Bozzi 2024 10.1038/s41598-023-40246-x (added by @DavideBozzi and @alexhbnr) + +#### Ancient Single Genome: Host Associated + +- White 2021 10.3390/biology10121324 (added by @DianaSpurite, @jfy133, and @alexhbnr) + +#### Ancient Metagenome: Environmental + +- Zampirolo 2024 10.1016/j.cub.2024.08.047 (added by @GiuliaZ538) + +### Changed + +- Fix archive sample accession codes for Liu 2024 10.1126/sciadv.adn8490 (@alexhbnr) +- Update the data_publication_doi of Lebrasseur 2024 10.1093/ve/vead087 (@alexhbnr) + +### Removed + +## v24.06: Su Nuraxi di Barumini + +### Added + +#### Ancient Metagenome: Host Associated + +- Wright 2024 10.1016/j.jasrep.2024.104510 (added by @biancamariabonucci) + +#### Ancient Single Genome: Host Associated + +- Sun 2024 10.1038/s41467-024-47358-6 (added by @aidaanva) +- Urban 2024 10.1016/j.cub.2024.04.006 (added by @aidaanva) +- Lebrasseur 2024 10.1093/ve/vead087 (added by @YuejiaoHuang) + +#### Ancient Metagenome: Environmental + +- Liu 2024 10.1126/sciadv.adn8490 (added by @rozwalak) + +### Changed + +### Removed + +## v24.03: Monticello + +### Added + +#### Ancient Metagenome: Host Associated + +- Nishimura 2024 10.1371/journal.pone.0295924 (added by @alexhbnr) +- Kirdok 2023 10.1038/s41598-023-48762-6 (added by @annaewhite) +- Fiorin 2024 10.1038/s41598-024-52422-8 (added by @jfy133) +- Jackson 2024 10.1093/molbev/msae017(added by @iseultj) + +#### Ancient Single Genome: Host Associated + +- Majander 2024 10.1038/s41586-023-06965-x (added by @ilight1542) +- Rozwalak 2024 10.1038/s41467-023-44370-0 (added by @rozwalak) +- Jackson 2024 10.1093/molbev/msae017(added by @iseultj) + +#### Ancient Metagenome: Environmental + +- Buchwald 2024 10.1093/ismejo/wrad006 (added by @darcy220606) +- Murchie 2023 10.1038/s41467-021-27439-6 (added by @ktozdogan) + +### Changed + +### Removed + +## v23.12: Cathedral, Alcázar and Archivo de Indias + +### Added + +#### Ancient Metagenome: Host Associated + +- Madison 2023 10.1371/journal.pone.0291540 (added by @DianaSpurite) + +#### Ancient Single Genome: Host Associated + +- Hodgkins 2023 10.1007/s13313-023-00936-6 (added by @DianaSpurite and @iseultj) + +#### Ancient Metagenome: Environmental + +- Pérez 2023 10.1111/fwb.14182 (added by @ktozdogan) + +### Changed + +- Fix coordinate of sample SK8 in Schuenemann 2013 10.1126/science.1238286 (@DianaSpurite and @marcel-keller) + +### Removed + +## v23.09: Historic Centre of Cienfuegos + +### Added + +#### Ancient Metagenome: Host Associated + +- Fontani 2023 10.1038/s41598-023-39250-y (added by @darcy220606) + +#### Ancient Single Genome: Host Associated + +- Neumann 2023 10.1553/archaeologia107 (added by @DianaSpurite) +- Bonczarowska 2023 10.1098/rspb.2023.0622 (added by @DianaSpurite) +- Long 2023 10.1371/journal.ppat.1011538 (added by @DianaSpurite) +- Campos 2023 10.1038/s41467-023-39950-z (added by @DianaSpurite) +- Parker2023 10.1371/journal.ppat.1011404 (added by @DianaSpurite) +- Clavel 2023 10.1016/j.isci.2023.106787 (added by @DianaSpurite/@theHatIsBack) + +#### Ancient Metagenome: Environmental + +### Changed + +### Removed + +## v23.06: Aachen Cathedral + +### Added + +#### Ancient Metagenome: Host Associated + +- Kimsis 2023 10.1111/1758-2229.13157 (added by @maxibor) +- Honap 2023 10.1002/ajpa.24735 (added by @schummax/ @tomrichtermeier/ @Frederik-Lutz) +- Klapper 2023 10.1126/science.adf5300 (added by @alexhbnr) + +#### Ancient Single Genome: Host Associated + +- Swali 2023 10.1038/s41467-023-38393-w (added by @DianaSpurite) +- Clavel 2023 10.1016/j.isci.2023.106787 (added by @DianaSpurite) +- Neumann 2023 10.1553/archaeologia107 (added by @DianaSpurite) + +#### Ancient Metagenome: Environmental + +- Rigou 2022 10.1093/femsml/uqac003 (added by @schummax, @tomrichtermeier, @Frederik-Lutz, and @alexhbnr) +- Armbrecht 2021, 10.1038/s43705-021-00070-8 (added by @ktozdogan) +- Vassallo 2023 10.1128/spectrum.04374-22 (added by @jfy133) +- Klapper 2023 10.1126/science.adf5300 (added by @alexhbnr) +- Zimmermann 2023 10.1038/s41467-023-36845-x (added by @ktozdogan) + +### Changed + +- Refined geographic coordinates of SeguinOrlando2021 based same site in Clavel 2023 + +### Removed + +## v23.03.0: Rocky Necropolis of Pantalica + +### Added + +#### Ancient Metagenome: Host Associated + +- Moraitou 2022 10.1093/molbev/msac263 (added by @alexhbnr) +- Quagliariello 2022 10.1038/s41467-022-34416-0 (added by @alexhbnr) +- Sarhan 2023 10.1186/s12915-022-01509-7 (added by @msabrysarhan) + +#### Ancient Single Genome: Host Associated + +- Braun 2020 10.3390/microorganisms8020298 (added by @jfy133) +- Quagliariello 2022 10.1038/s41467-022-34416-0 (added by @DianaSpurite) +- Bonczarowska 2022 10.1186/s13059-022-02806-8 (added by @DianaSpurite) +- Eaton 2023 10.1016/j.cub.2023.01.064 (added by @DianaSpurite) +- Rifkin 2023 10.1038/s42003-023-04582-y (added by @mibr30) +- Sarhan 2023 10.1186/s12915-022-01509-7 (added by @msabrysarhan) + +#### Ancient Metagenome: Environmental + +- Kjaer 2022 10.1038/s41586-022-05453-y (added by @ktozdogan) +- Nwosu 2023,10.1038/s42003-023-04430-z (added by @ktozdogan) + +### Changed + +- Fixed md5sum hash error of a Ozga2019 sample +- Fixed md5sum hash error of a Granehall2021 sample +- Replace URLs of Velsko2022 with the ones from the column "fastq_ftp" instead of the column "submitted_ftp" from ENA + +### Removed + +## v22.12: Joya de Cerén + +### Added + +#### Ancient Metagenome: Host Associated + +- Modi 2021 10.1016/j.quaint.2021.12.003 (added by @jfy133) +- Scorrano 2022 10.1038/s42003-022-04190-2 (added by @ktozdogan) +- Fagernäs 2022 10.1093/femsmc/xtac006 (added by @jfy133) +- Velsko 2022 10.1093/pnasnexus/pgac148 (added by @bbartholdy) + +#### Ancient Single Genome: Host Associated + +- Jäger 2022 10.1016/j.tube.2022.102181 (added by @DianaSpurite) +- Rieux 2021 10.1038/s41598-021-00518-w (added by @DianaSpurite) +- Guellil 2021 10.1038/s41598- 021- 98214-2 (added by @DianaSpurite) +- Guellil 2022 10.1186/s13059-021-02580-z (added by @DianaSpurite) +- Spyrou 2022 10.1038/s41586-022-04800-3 (added by @DianaSpurite) +- Neumann 2022 10.1016/j.cub.2022.06.094 (added by @DianaSpurite) +- Vågene 2022 10.1038/s41467-022-28562-8 (added by @DianaSpurite) +- Austin 2022 10.1038/s42003-022-03890-z (added by @DianaSpurite) +- Guellil 2022 10.1126/sciadv.abo4435 (added by @DianaSpurite) +- Long 2022 10.1038/s42003-022-03527-1 (added by @jfy133) + +#### Ancient Metagenome: Environmental + +- Armbrecht 2022 10.1038/s41467-022-33494-4 (added by @ilight1542) +- Courtin 2022 10.1002/edn3.336 (added by @ktozdogan) +- Iwańska 2022 10.1038/s41598-022-12761-w (added by @ktozdogan) +- Gelabert 2021 10.1016/j.cub.2021.06.023 (added by @ktozdogan) +- Moore 2020 10.1002/ece3.6082 (added by @ktozdogan) +- Perez 2022 10.3390/microorganisms10081623 (added by @Darcy220606) + +### Changed + +- Synchronised site location name of PattersonRoss2018 with Long2022 + +### Removed + +## v22.09.2: Pyu Ancient Cities + +Correction: Correct release ZIP upload + +## v22.09: Pyu Ancient Cities + +### Added + +- Extended repository to include library level metadata for all existing samples + +#### Ancient Metagenome: Host Associated + +- Granehäll 2021 10.1186/s40168-021-01132-8 +- Maixner 2021 10.1016/j.cub.2021.09.031 +- Kazarina 2021b 10.1016/j.jasrep.2021.103213 + +#### Ancient Single Genome: Host Associated + +- Granehäll 2021 10.1186/s40168-021-01132-8 +- Pfrengle 2021 10.1186/s12915-021-01120-2 +- Kocher 2021 10.1126/science.abi5658 +- Andrades Valtueña 2022 10.1073/pnas.2116722119 + +#### Ancient Metagenome: Environmental + +#### Ancient Metagenome: Anthropogenic + +- Due to the lack of community interest, this table has now been deprecated and will not be included in future releases of AncientMetagenomeDir. However it will be reinstated in the future if interest returns. + +### Misc + +- Added library metadata for FASTQ and BAM level data +- Changed the missing value from `NA` to `Unknown` for archive_project for the samples tsv +- Removed 'sampling date' columns from host-associated metagenome and single-genome sample tables as this is almost never reported + +### Changed + +- Changed archive_project from NA to Unknown for Taubenberger2005, PattersonRoss2018, Worobey2016 +- Fixed Susat2021 DOIs (excel dragging error) +- Fixed Kazarina2021 Project/Sample accessions (column flip error) +- Fixed Morozova2020 DOIs (excel dragging error) +- Fixed Bieker2020 DOIs (paper partly reused previous data for new purpose and earlier had the other publication DOI. Now made all DOIs and dates consistent for the publication where metagenomics was performed) +- Fixed Bieker2020 sample USNH-39 into two separate 'artifical samples' due to upload of two libraries to two difference archives. +- Fixed Bieker2020 missing sample accession codes (due to later re-sequencing and non-reused SRS/ERS code) +- Fixed Muhlemann2018 Project ID (now available) +- Fixed FellowsYates2021 corrected typo in longitude 85.53 > -85.53 +- Fixed Velsko2018 project name to Velsko2019 (wrong publication year) +- Fixed Schuenemann2011 Put the accession ID of the full plasmid sequence not partial +- Fixed Martin2013 corrected archive name (incorrectly reported in publication) +- Fixed Seersholm2016 archive ENA (from incorrectly specified as SRA) +- Fixed Eisenhofer2020 date rounding error (originally added 230 rather than 200) +- Fixed BravoLopez2020 typo in site name (Inmaculate -> Immaculate) +- Fixed Willmann2018 project_name (originally missing the second 'n') +- Fixed DeDios2020, DeDios2019, DeDios2021 project_names (originally had lowercase leading d) +- Fixed DeDios2020 sample_name from Jean-Paul Marat to Marat to make it consistent with the libraries uploaded in the ENA +- Fixed Campos2021 sample accession column had run accession +- Fixed Philips2017 fixed incorrect DOI (from later publication that reused same data) +- Fixed Wagner2014 incorrect archive in the samples tsv +- Fixed Eerkens2018 sample name from an individual name to the specific calculus sample name +- Fixed Zhou2018 by switching sample name to a clearer one based on the file name rather than just the project_archive ID +- Fixed Zhou2018 in ancientsinglegenome-hostassociated archive_project and archive_accession to be more explicit as of which files have been use to reconstruct the genome +- Fixed Campos2021 sample_name to HERB_1937 to make it consistent with the libraries uploaded in the ENA +- Fixed Borry2020 sample_name to match archaeological ID from paper (as opposed to laboratory ID which was in sample.tsv table) +- Fixed Velsko2019 accidental inclusion of old sample accessions to keep 'correct' sample accession of correct data +- Fixed Liang2021 sample names to be more specific to allow association with library names +- Fixed GuzmanSolis2021 archive_project and archive_accession to include the Dryad doi and the specific ids from the download links +- Fixed Ardelean2020 sample_name incorrect in samples tsv, replaced with sample_name from libraries tsv +- Fixed Morozova2020 typo in - Azov37 -> Axov38 +- Fixed Morozova2020 accidental ERS code duplication across two samples + +### Removed + +- Removed Mendum2014 sample SK27 due to TreeBASE repository not being accessible any more +- Removed SantiagoRodriguez2016 and SantiagoRodridguez2016 samples as raw data is no longer publicly accessible on MG-RAST +- Removed Braadbaart2020 as uploaded data was not shotgun data as required for inclusion in environmental table +- Removed Worobey2016 samples SF74 and SF73 as not in final consensus sequences +- Removed Schulte2021 sample accessions of targeted capture libraries (which were different from the shotgun libraries) +- Removed Schuenemann2018 libraries (Jørgen\_\*) that were originally published in tandem with and already included in KrauseKyora2018b + +## v21.09: Taputapuātea + +### Added + +#### Ancient Metagenome: Host Associated + +- Ottoni 2021 10.1073/pnas.2102116118 +- Rampelli 2021b 10.1016/j.isci.2021.102816 +- Brealey 2021 10.1016/j.cub.2021.08.010 + +#### Ancient Single Genome: Host Associated + +- Susat 2021 10.1016/j.celrep.2021.109278 +- De Dios 2021 10.1016/j.isci.2021.103021 +- Campos 2021 10.1371/journal.ppat.1009714 +- Guzmán-Solis 2021 10.7554/eLife.68612 +- Wu 2021 10.1371/journal.ppat.1009886 + +#### Ancient Metagenome: Environmental + +#### Ancient Metagenome: Environmental + +- Moguel 2021 10.1038/s41598-021-92981-8 + +#### Ancient Metagenome: Anthropogenic + +#### Misc + +### Changed + +- Corrected _H. pylori_ having taxonomic domain to bacteria from virus +- Ferrari2020: Corrected typo in accession ERS3935829 +- BravoLopez2020: Corrected typo in site name Inmaculate Conception > Immaculate Conception + +### Removed + +## v21.06: Côa Valley and Siega Verde + +### Added + +#### Ancient Metagenome: Host Associated + +- Wibowo 2021 10.1038/s41586-021-03532-0 +- Fellows Yates 2021 10.1073/pnas.2021655118 +- Farrer 2021 10.1038/s41598-021-86100-w + +#### Ancient Single Genome: Host Associated + +- Seguin-Orlando 2021 10.1016/j.isci.2021.102383 +- Haller 2021 10.1016/j.isci.2021.102419 +- Guellil 2020 10.1073/pnas.2009677117 +- Danneels 2021 10.1016/j.cub.2021.03.049 +- Kocher 2021 10.1126/science.abi5658 + +#### Ancient Metagenome: Environmental + +- Wibowo 2021 10.1038/s41586-021-03532-0 +- Schulte 2021 10.1111/1755-0998.13311 +- Lammers 2021 10.1038/s42003-021-01710-4 +- Liang 2021 10.1186/s40168-021-01057-2 + +#### Ancient Metagenome: Anthropogenic + +#### Misc + +### Changed + +- Changed `collection_date` column to `sampling_date` to clarify this is when drilling, or sub-sampling for DNA analysis was performed +- Corrected date for GLZ001 from Yu et al. (2020) from 4400 to 4600 based on the re-calibrated reported date in the paper (doi: 10.1016/j.cell.2020.04.037) + +### Removed + +## v21.03: Town of Provins + +### Added + +- [#348](https://github.com/SPAAM-community/AncientMetagenomeDir/pull/348): Interactive GeoJSON maps rendered with GitHub +- [#349](https://github.com/SPAAM-community/AncientMetagenomeDir/issues/349): No spaces allowed in `archive_accession` column. + +#### Ancient Metagenome: Host Associated + +- Philips 2017 10.1186/s12864-020-06810-9 +- Kazarina 2021 10.3390/genes12020309 +- Seguin-Orlando 2021 10.1016/j.cub.2020.12.015 +- Rampelli 2021 10.1038/s42003-021-01689-y +- Witt 2021 10.1038/s41598-021-82362-6 + +#### Ancient Single Genome: Host Associated + +- Philips 2020 10.1186/s12864-020-06810-9 +- Kılınç 2021 10.1126/sciadv.abc4587 + +#### Ancient Metagenome: Environmental + +- Rampelli 2021 10.1038/s42003-021-01689-y + +#### Ancient Metagenome: Anthropogenic + +#### Misc + +- Added project accession column to all tables to help finding other samples from same project + +### Changed + +- Cutibacterium acnes (DeDios2020, 10.1016/j.meegid.2020.104209) changed from eukaryota to bacteria. +- Corrected publication_doi and sample_age_doi for Jacobson2020 (10.1098/rstb.2019.0586) +- Corrected overwritten new SRA information for Weyrich 2017 (10.1038/nature21674) +- Corrected date DOI spreadsheetdragging error for Armbrecht 2020 (10.1111/1755-0998.13162) + +### Removed + +## v20.12: Ancient City of Nessebar + +### Added + +#### Ancient Metagenome: Host Associated + +- Modi 2020 10.1007/s12520-019-00983-5 +- Appelt 2014 10.1128/AEM.03242-13 +- Eisenhofer 2020 10.1098/rstb.2019.0578 +- Jacobson 2020 10.1098/rstb.2019.0589 +- Sabin 2020 10.1098/rstb.2019.0576 +- Williams 2020 10.1128/MRA.00850-20 +- Fotakis 2020 10.1098/rstb.2019.0584 + +#### Ancient Single Genome: Host Associated + +- Susat 2020 10.1038/s41598-020-71530-9 +- Eisenhofer 2020 10.1098/rstb.2019.0578 +- Morozova 2020 10.1098/rstb.2019.0569 +- Schuenemann 2018 10.1371/journal.pntd.0006447 +- Ferrari 2020 10.1098/rstb.2019.0572 +- Williams 2020 10.1128/MRA.00850-20 +- Fotakis 2020 10.1098/rstb.2019.0584 +- Marciniak 2016 10.1016/j.cub.2016.10.016 +- Gelabert 2016 10.1073/pnas.1611017113 +- Taubenberger 2005 10.1038/nature04230 +- Lugli 2017 10.1186/s40168-016-0221-y +- Bravo Lopez 2020 10.1098/rstb.2019.0580 + +#### Ancient Metagenome: Environmental + +- Added new metadata columns to improve data reconstructions: sequence_name (e.g. core, transect), depth, feature (e.g. cave, lake), study type. +- Braadbaart 2020 10.1016/j.jasrep.2020.102468 +- DerSarkissian 2016 10.1111/1755-0998.12679 + +#### Ancient Metagenome: Anthropogenic + +#### Misc + +- Added 'live-status' summary images that are displayed on README and updated on every new submission. + +### Changed + +- Ardelean 2020: Differentiated samples with identical names +- Ahmed 2018: Updated sample_age and sample_age_doi +- Graham 2016: Updated sequence_name +- Wang 2017: Updated sequence_name +- Pedersen 2016: Updated sequence_name and corrected two typos in depth +- Armbrecht 2020: fixed broken DOI due to spreadsheet drag-down error +- de Dios 2019: Standardised coordinates and location name with Gelabert 2016 for accuracy +- van Dorp 2020: Standardised coordinates and location name with Gelabert 2016 for accuracy +- Weyrich 2017: Replaced OAGR codes with newly uploaded SRA accession numbers + +## v20.09: Ancient Ksour of Ouadane + +### Added + +#### Ancient Metagenome: Host Associated + +- Warinner 2014 10.1038/ng.2906 +- Weyrich 2017 10.1038/nature21674 +- Velsko 2018 10.1186/s40168-019-0717-3 +- Jensen 2019 10.1038/s41467-019-13549-9 +- Fagernäs 2020 10.1016/j.jas.2020.105135 +- Mann 2018 10.1038/s41598-018-28091-9 +- Brealey 2020 10.1093/molbev/msaa135 +- Ozga 2019 10.1038/s41598-019-53802-1 +- Ottoni 2019 10.1038/s41598-019-56074-x +- Zhou 2018 10.1016/j.cub.2018.05.058 +- Wilman 2018 10.1371/journal.pone.0196482 +- Nieves-Colón 2020 10.1093/molbev/msz267 +- Ozga 2016 10.1002/ajpa.22960 +- Santiago-Rodriguez 2016 10.1093/femsec/fiw182 +- Santiago-Rodriguez 2017 10.3390/genes8110310 +- Maixner 2016 10.1126/science.aad2545 +- Ferrari 2018 10.3390/genes9090436 +- McDonough 2018 10.1093/jmammal/gyy080 +- Campana 2014 10.1186/1756-0500-7-111 +- Bieker 2020 10.1111/1755-0998.13174 + - In addition to new samples, includes re-utilised data from Sánchez-Barreiro 2016 10.1111/1755-0998.12610 and Exposito-Alonso 2018 10.1371/journal.pgen.1007155 +- Neukamm 2020 10.1186/s12915-020-00839-8 +- Eerkens 2018 10.1016/j.ijpp.2018.05.001 + +#### Ancient Single Genome: Host Associated + +- Warinner 2014 10.1038/ng.2906 +- Bos 2014 10.1038/nature13591 +- Schuenemann 2013 10.1126/science.1238286 +- Schuenemann 2018 10.1371/journal.ppat.1006997 +- Devault 2017 10.7554/eLife.20983 +- Mühlemann 2018 10.1038/s41586-018-0097-z +- Düx 2020 10.1126/science.aba9411 +- Andrades Valtueña 2017 10.1016/j.cub.2017.10.025 +- Rasmussen 2015 10.1016/j.cell.2015.10.009 +- Spyrou 2018 10.1038/s41467-018-04550-9 +- Rascovan 2019 10.1016/j.cell.2018.11.005 +- Yu 2020 10.1016/j.cell.2020.04.037 +- Guellil 2018 10.1073/pnas.1807266115 +- Duggan 2016 10.1016/j.cub.2016.10.061 +- de Barros Damgaard 2018 10.1038/s41586-018-0094-2 +- Key 2020 10.1038/s41559-020-1106-9 +- Barquera 2020 10.1016/j.cub.2020.04.002 +- Krause-Kyora 2018 10.7554/eLife.36666 +- Giffin 2020 10.1038/s41598-020-66012-x +- Feldman 2016 10.1093/molbev/msw170 +- Bar-Gal 2013 10.1002/hep.25852 +- Keller 2019 10.1073/pnas.1820447116 +- Mühlemann 2018b 10.1073/pnas.1804921115 +- Wagner 2014 10.1016/S1473-3099(13)70323-2 +- Bos 2011 10.1038/nature10549 +- Bos 2016 10.7554/eLife.12994.001 +- de-Dios 2020 10.1016/j.meegid.2020.104209 +- Patterson Ross 2018 10.1371/journal.ppat.1006750 +- Vågene 2018 10.1038/s41559-017-0446-6 +- Zhou 2018 10.1016/j.cub.2018.05.058 +- Sabin 2020 10.1186/s13059-020-02112-1 +- Kay 2014 10.1128/mBio.01337-14 +- Devault 2014 10.1056/NEJMoa1308663 +- Kay 2015 10.1038/ncomms7717 +- van Dorp 2020 10.1093/molbev/msz264 +- Worobey 2016 10.1038/nature19827 +- Kerudin 2019 10.1016/j.jas.2019.105035 +- Schuenemann 2011 10.1073/pnas.1105107108 +- DeDios 2019 10.1099/mgen.0.000289 +- Duggan 2020 10.1186/s13059-020-02079-z +- Namouchi 2018 10.1073/pnas.1812865115 +- Spyrou 2016 10.1016/j.chom.2016.05.012 +- Martin 2013 10.1038/ncomms3172 +- Spyrou 2019 10.1038/s41467-019-12154-0 +- Krause-Kyora 2018b 10.1038/s41467-018-03857-x +- Majander 2020 10.1016/j.cub.2020.07.058 +- Yoshida 2013 10.7554/eLife.00731 (KM117502 and KM117507 not included, no data in the ENA PRJEB1877) +- Mühlemann 2020 10.1126/science.aaw8977 +- Mendum 2014 10.1186/1471-2164-15-270 +- Neukamm 2020 10.1186/s12915-020-00839-8 +- Eerkens 2018 10.1016/j.ijpp.2018.05.001 + +#### Ancient Metagenome: Environmental + +- Ahmed 2018 10.1016/j.quascirev.2017.11.037 +- Gaffney 2020 10.3390/geosciences10070270 +- Slon 2017 10.1126/science.aam9695 +- Smith 2015 10.1126/science.1261278 +- Ardelean 2020 10.1038/s41586-020-2509-0 +- Domain 2020 10.3389/fevo.2020.00218 +- Armbrecht 2020 10.1111/1755-0998.13162 +- Pedersen 2016 10.1038/nature19085 +- Graham 2016 10.1073/pnas.1604903113 +- Wang 2017 10.1111/jbi.13010 +- Seersholm 2016 10.1038/ncomms13389 + +#### Ancient Metagenome: Anthropogenic + +### Changed + +- Fagernäs 2020: Fixed missing sample age DOI +- Ottoni 2019: Fixed duplicate SRA codes +- de-Dios 202: Added sample data +- Schuenemann 2018: dates corrected calculating based on 1950 +- Willmann2018: re-list the community_type of tooth samples as skeletal tissue +- Brealey2020: re-list the community_type of tooth samples as skeletal tissue +- Maixner2016: collapsed _H. pylori_ genome samples into one +- Bos2016: Corrected site name +- Bos2011: changed site name for sample ES_6330 (6330) to Abbey St. Mary Graces + after investigation from Monica Green +- Weyrich 2017: Added missing OAGR accession after consultation with authors +- Maixner2016: corrected singlegenome_domain + +### Removed From 88fccc367e1b1659d96e8f1c0068eb2b00658f9d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 16:43:41 +0100 Subject: [PATCH 62/67] Update CHANGELOG.md --- CHANGELOG.md | 1 - 1 file changed, 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 79b0ba0cb..0324ecb37 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -13,7 +13,6 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Single Genome: Host Associated - Susat 2021 10.1016/j.celrep.2021.109278 (C14 added by @aidaanva) - - C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad) - Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) - C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) From 67790c7778d8f1fe39be44f821e260e6436559b5 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 16:54:06 +0100 Subject: [PATCH 63/67] Revert "Adding gorilla gorilla sample host hammerle2024" --- CHANGELOG.md | 1 + ...tsinglegenome-hostassociated_libraries.tsv | 3161 +++++++++++++++++ ...entsinglegenome-hostassociated_samples.tsv | 736 ++++ assets/enums/sample_host.json | 4 +- 4 files changed, 3899 insertions(+), 3 deletions(-) create mode 100644 ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv create mode 100644 ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv diff --git a/CHANGELOG.md b/CHANGELOG.md index 0324ecb37..79b0ba0cb 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -13,6 +13,7 @@ and this project follows to [Calendar Versioning](https://calver.org/). #### Ancient Single Genome: Host Associated - Susat 2021 10.1016/j.celrep.2021.109278 (C14 added by @aidaanva) + - C14 Austin 2022 10.1038/s42003-022-03890-z (added by @nihandilsad) - Added and Fixed C14 info for Warinner2014 10.1038/ng.2906 (added by @biancamariabonucci) - C14 Key2020 10.1038/s41559-020-1106-9 (added by @iseultj) diff --git a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv new file mode 100644 index 000000000..f9431421c --- /dev/null +++ b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv @@ -0,0 +1,3161 @@ +project_name publication_year data_publication_doi sample_name archive archive_project archive_sample_accession library_name strand_type library_polymerase library_treatment instrument_model library_layout library_strategy read_count archive_data_accession file_type download_links download_md5s download_sizes +Marciniak2016 2016 10.1016/j.cub.2016.10.016 LV13 SRA PRJNA348634 SRS1747845 LV13 double Unknown unknown Illumina HiSeq 1500 PAIRED WGS 113 SRR4425648 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/008/SRR4425648/SRR4425648.fastq.gz 60b42bfe436672831f295285e2e0ad35 2892 +Marciniak2016 2016 10.1016/j.cub.2016.10.016 LG20 SRA PRJNA348634 SRS1747846 LG20 double Unknown unknown Illumina HiSeq 1500 PAIRED WGS 7 SRR4425649 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/009/SRR4425649/SRR4425649.fastq.gz b3c895a83afa122e65345a87850e27e5 339 +Bos2014 2014 10.1038/nature13591 64 SRA PRJNA244165 SRS592075 sample_64 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 50916301 SRR1238559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_2.fastq.gz f62e1e3dd90fb7fd0324e920f15ab8bd;b635c5da56ca1b3dd185678c9f9df508 3713855268;3742735134 +Bos2014 2014 10.1038/nature13591 58 SRA PRJNA244165 SRS591992 sample_58 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 20046901 SRR1238557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/007/SRR1238557/SRR1238557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/007/SRR1238557/SRR1238557_2.fastq.gz 8d64819a3e12ff309783c802087d73a4;8b15368ff36e993c12dd8b44f4a7b8d0 1510008541;1515109783 +Bos2014 2014 10.1038/nature13591 54 SRA PRJNA244165 SRS591994 sample_54 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 80406577 SRR1238558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_2.fastq.gz 72ade0f81eed372eae9fb927a484aa44;5f1fa7e6729773322b52903151f03192 5821824690;5839496681 +Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.UDG.TBcap double PfuTurbo DNA full-udg NextSeq 500 PAIRED Targeted-Capture 61593207 SRR11524778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/078/SRR11524778/SRR11524778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/078/SRR11524778/SRR11524778_2.fastq.gz da08f134f277c618d94998b3cf2d2bc5;c11ce149ad96df260f6d45b414e165bc 4072753252;4221966474 +Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.nUDG.TBcap double PfuTurbo DNA none NextSeq 500 PAIRED Targeted-Capture 19263550 SRR11524779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/079/SRR11524779/SRR11524779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/079/SRR11524779/SRR11524779_2.fastq.gz 51f77e2bc61a9d19e163d9f57e64ba37;61b3f94fbee53538f7dd4982f3bfceb6 1276503178;1317932918 +Sabin2020 2020 10.1186/s13059-020-02112-1 Bishop Peder Winstrup SRA PRJNA517266 SRS6462469 LUND1.nUDG.SG double PfuTurbo DNA none NextSeq 500 SINGLE WGS 3820818 SRR11524780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR115/080/SRR11524780/SRR11524780.fastq.gz 0f7fe191aeec722870941200ef7affa2 155645452 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 6746607 ERR4065482 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065482/ERR4065482.fastq.gz 2721e6407703803ff75ba7cd76405ccd 259006300 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 8925991 ERR4065483 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065483/ERR4065483.fastq.gz c3e33740e956d4f8c1458f86d64e431c 347088887 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 4239907 ERR4065501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/001/ERR4065501/ERR4065501_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/001/ERR4065501/ERR4065501_2.fastq.gz 76482ec38197859103c5dac08cf2e7a1;8b02b7b637bf636a0c843788a49ba255 133750930;139832156 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529000 SJN003.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 3767036 ERR4065502 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065502/ERR4065502_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/002/ERR4065502/ERR4065502_2.fastq.gz 4f892ef4252ed69a9b60b44228a21d00;e5a77df677e55b0126d6faea229f1a89 120329194;125115188 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN003 ENA PRJEB37490 ERS4529001 SJN003.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 38882227 ERR4065503 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065503/ERR4065503_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/003/ERR4065503/ERR4065503_2.fastq.gz 178c0eb333ac6863733ed9053e3b3947;264c35ce49f2afdc7035887b88af58d2 1468405467;1586160626 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 7392875 ERR4065478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065478/ERR4065478.fastq.gz 0464edab02279e7c87320ff1eb6c0eac 275370271 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE WGS 7416023 ERR4065479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/009/ERR4065479/ERR4065479.fastq.gz 52e9b2e78f0fd1bb0d65c3390e825eb8 279472384 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 2835130 ERR4065497 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/007/ERR4065497/ERR4065497_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/007/ERR4065497/ERR4065497_2.fastq.gz 572df2c6bb98365da47c67e3aae4638c;e0231c0454e5f82687cbe4d000819df9 88602842;91766214 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528997 SJN001.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 2522025 ERR4065498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065498/ERR4065498_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/008/ERR4065498/ERR4065498_2.fastq.gz f83d48b12bf874b8353d7c6713058a9c;22bc9c6146256092713d56f2c79ee8a5 79706806;82858684 +Barquera2020 2020 10.1016/j.cub.2020.04.002 SJN001 ENA PRJEB37490 ERS4528998 SJN001.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12797180 ERR4065490 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/000/ERR4065490/ERR4065490_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR406/000/ERR4065490/ERR4065490_2.fastq.gz 717843422974b2c80bc0fc5bfc67d174;d4e2f5da0715b2991e8e6bac04ffd86b 440494468;466292511 +Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 38126012 ERR4570267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570267/ERR4570267_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570267/ERR4570267_2.fastq.gz 2499a87a29c3981a535ad14cb7aae24e;89feac03e2c772b0400caf43c1b78cb1 2147755060;2179759864 +Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC2-C3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 79331895 ERR4570268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570268/ERR4570268_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570268/ERR4570268_2.fastq.gz d95945e3cf5d2406f13a0088c9e87f4e;76fee376de18eb4fa2e4cb68f3470caa 4341814775;4418527061 +Guellil2020 2020 10.1073/pnas.2009677117 CHE1 ENA PRJEB27821 ERS5051705 CHEC4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 34027874 ERR4570269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570269/ERR4570269_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570269/ERR4570269_2.fastq.gz b466ead4397c423edca63d4f59c766f3;4a1b8555297a2d867a572447e58755c8 1923936650;1950760044 +Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 81093373 ERR4570270 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570270/ERR4570270_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570270/ERR4570270_2.fastq.gz 21f2b3504a49e401285d27d3dce1480a;0a46c6ebcfadaaceb0f00d325ec43b3c 3944368694;3956689098 +Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC2a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 40572494 ERR4570271 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570271/ERR4570271_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570271/ERR4570271_2.fastq.gz 373857376fc4d18457bccb8dc8e2fd62;18d633540233d4f1e7f0db54f7d6e091 1965614055;1974720648 +Guellil2020 2020 10.1073/pnas.2009677117 COL001 ENA PRJEB27821 ERS5051706 COLC2b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 46795553 ERR4570272 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570272/ERR4570272_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570272/ERR4570272_2.fastq.gz fdd0e0102e805def77b4f66d5ffc7861;10a23b6faf7357656270349d6feeca67 2281301918;2278560706 +Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC10 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 27410164 ERR4570273 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570273/ERR4570273_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570273/ERR4570273_2.fastq.gz 47b97503655520875109262fd3613721;d34f4124420e52af908c90bcbf522307 1465905954;1465993275 +Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC10R-11R double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 73261307 ERR4570274 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/004/ERR4570274/ERR4570274_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/004/ERR4570274/ERR4570274_2.fastq.gz ff8269dbcb5eabc3e26a54ce97f21cc1;5c452ea10042756b97c46fc9298831ca 4060323219;4113176733 +Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC12 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 38412120 ERR4570275 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/005/ERR4570275/ERR4570275_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/005/ERR4570275/ERR4570275_2.fastq.gz 754e10a8935529bc11125e8274f37f1f;f30da92049363522e88abc66ecaa3b0e 2122234883;2146833434 +Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC1-C4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 87352543 ERR4570276 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/006/ERR4570276/ERR4570276_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/006/ERR4570276/ERR4570276_2.fastq.gz 958c5e364568dc08e09fe176800fed87;5088a7205769e1cd442be3fc6db04cfc 4517923618;4680702651 +Guellil2020 2020 10.1073/pnas.2009677117 PEB10 ENA PRJEB27821 ERS5051704 PC6 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 59315415 ERR4570277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570277/ERR4570277_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/007/ERR4570277/ERR4570277_2.fastq.gz be1545f24d635e66ab71fbe58c5cc618;5b31a8c876a4fc0ac819d35abfd4ad46 3153260824;3277079996 +Guellil2020 2020 10.1073/pnas.2009677117 SPN1 ENA PRJEB27821 ERS5051707 SC1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 41388546 ERR4570278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570278/ERR4570278_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/008/ERR4570278/ERR4570278_2.fastq.gz 91ff3f4483ec57621c0c2381bff1a1cb;0e75004d0be6a17ccfea1aabad2602fe 2024324187;2053584127 +Guellil2020 2020 10.1073/pnas.2009677117 SPN7 ENA PRJEB27821 ERS5051708 SC2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 79778440 ERR4570279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570279/ERR4570279_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/009/ERR4570279/ERR4570279_2.fastq.gz a353c57936892d7f4e6f05a4abe4aece;79ed9dd9c0866decffe417232bf0ca04 3865188488;3887993872 +Guellil2020 2020 10.1073/pnas.2009677117 SPN8 ENA PRJEB27821 ERS5051709 SC3 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 74387557 ERR4570280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570280/ERR4570280_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/000/ERR4570280/ERR4570280_2.fastq.gz 4efea72be765bf2cf519e7cca7d20d72;973dbfc854cf35972be8d5d01127259e 3615565195;3653891586 +Guellil2020 2020 10.1073/pnas.2009677117 SPN13 ENA PRJEB27821 ERS5051710 SC4 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 85008345 ERR4570281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570281/ERR4570281_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/001/ERR4570281/ERR4570281_2.fastq.gz 846ba9ca5bce27a4ade684d78636fda9;17f88d815b8a9c2617a683be39069654 4204251858;4227173821 +Guellil2020 2020 10.1073/pnas.2009677117 SPN14 ENA PRJEB27821 ERS5051711 SC5 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 45162002 ERR4570282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570282/ERR4570282_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/002/ERR4570282/ERR4570282_2.fastq.gz 2922c608b4d963b3455026469cab49ab;d2165b7d84ee47ff52e68eb5fe8d8f54 2143002903;2171304895 +Guellil2020 2020 10.1073/pnas.2009677117 SPN19 ENA PRJEB27821 ERS5051712 SC7 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 75698633 ERR4570283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570283/ERR4570283_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR457/003/ERR4570283/ERR4570283_2.fastq.gz a9c152f8de0a045e91ecbc479955398a;a415ab76ec98b0d01523f45a4470d157 3544065234;3593699391 +Bos2011 2011 10.1038/nature10549 ES_11972 SRA SRP008060 SRS259946 individual_11972 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 4101028 SRR341962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341962/SRR341962.fastq.gz fac58a8e837ae753d1763facb80ea786 602854678 +Bos2011 2011 10.1038/nature10549 ES_6330 SRA SRP008060 SRS259944 individual_6330 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 2290804 SRR341960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341960/SRR341960.fastq.gz 3396956f77a739a69241444f0f7475cf 339550403 +Bos2011 2011 10.1038/nature10549 ES_8124 SRA SRP008060 SRS259947 individual_8124 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 1617517 SRR341963 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341963/SRR341963.fastq.gz 607e93c47d181dd59c7afdb531ff3eb7 242258560 +Bos2011 2011 10.1038/nature10549 ES_8291 SRA SRP008060 SRS259945 individual_8291 double AmpliTaq Gold DNA full-udg Illumina Genome Analyzer II SINGLE Targeted-Capture 10546927 SRR341961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR341/SRR341961/SRR341961.fastq.gz 0d73a594ad2ec8407b289662e28d0d9d 1568165151 +Kay2014 2014 10.1128/mBio.01337-14 2568 ENA PRJEB6045 ERS430636 unspecified double Unknown none Illumina MiSeq PAIRED WGS 20097779 ERR472949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR472/ERR472949/ERR472949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR472/ERR472949/ERR472949_2.fastq.gz 0f0fc00573bd2760ace1849212cd1f1a;57e4357895e772ecc6e6d40d9941c81e 2072987388;2214003215 +Eerkens2018 2018 10.1016/j.ijpp.2018.05.001 16 SRA PRJNA377320 SRS2006287 RN4 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 7357756 SRR5297130 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR529/000/SRR5297130/SRR5297130_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR529/000/SRR5297130/SRR5297130_2.fastq.gz d188d5e22dbb0bf8275e67dd3db091da;60f13d4c136d75b5db61ef20a1173984 306644456;312782322 +Gelabert2016 2016 10.1073/pnas.1611017113 CA, CM, POS SRA PRJNA338278 SRS1609867 falciparum-definitiu-filtrat-050416_mt double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1220 SRR4034883 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR403/003/SRR4034883/SRR4034883.fastq.gz 24d66eb97c02077004d9f9382b2750bf 26832 +Gelabert2016 2016 10.1073/pnas.1611017113 CA, CM, POS SRA PRJNA338278 SRS1607662 vivax-definitiu-310316 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 459 SRR4019023 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR401/003/SRR4019023/SRR4019023.fastq.gz b2d5ee9ac55bbe7568fb24746955c749 11998 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2191016 ERR2204587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204587/ERR2204587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204587/ERR2204587_2.fastq.gz 170e8cb88bfdfd1d4930446ad98afadc;3fc3896ff38769ae1bb3775840bac1e4 94555050;97546002 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16886557 ERR2204588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204588/ERR2204588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204588/ERR2204588_2.fastq.gz e12f51d0b4898e0ef350bfd8b8d8017b;207513869e4c86bbbbb179faa269c1c5 650307928;719841467 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6049159 ERR2204589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204589/ERR2204589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204589/ERR2204589_2.fastq.gz 77f389997b096287031469e69537fdc1;b8872f65f769e058386ecec0e266b2df 268428474;276868562 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 69178818 ERR2204590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204590/ERR2204590_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204590/ERR2204590_2.fastq.gz 2888334f2fffa7e40a372fa66a5b1406;c821cbddb04da8dde1e3f243be52ebb2 2695206862;2984904513 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_10 ENA PRJEB23438 ERS2020211 10CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1114051 ERR2204627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204627/ERR2204627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204627/ERR2204627_2.fastq.gz 5fa9e5871f3f1fb434963176e8a5d0ad;c0dd5486388b9b90819c050e9cd9de7f 77122638;81454600 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 22144991 ERR2204591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204591/ERR2204591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204591/ERR2204591_2.fastq.gz 523fc359e60a8f722382d19de43c0545;1fde162bdc5166ff4c894926f29e7e07 960742974;996472857 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 49786999 ERR2204592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204592/ERR2204592_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204592/ERR2204592_2.fastq.gz dbeee745989f4a15ba6bed2ec749aaaf;4b29bfa7c2332f6c222a1a88a65ac513 2183717010;2250834665 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1482002 ERR2204628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204628/ERR2204628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204628/ERR2204628_2.fastq.gz dbd81836ad148afd5c1b175762fd2a16;e75ffd0e2a908cc28cca8af669aedc0e 105965924;111203152 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1331139 ERR2204664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204664/ERR2204664.fastq.gz 772fb6f62f85f1d2357ad43eb1189b54 50139896 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1302267 ERR2204665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204665/ERR2204665.fastq.gz cb9ddc6e4937e4d3b72507d1dccb96bc 49380986 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 606966 ERR2204666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204666/ERR2204666.fastq.gz fd7c7293e8028873daf806bd026d3952 22671078 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_11 ENA PRJEB23438 ERS2020212 11CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 595776 ERR2204667 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204667/ERR2204667.fastq.gz c035d0e2ee4ca2e469748a0136c9a8f7 22410039 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2713663 ERR2204593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204593/ERR2204593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204593/ERR2204593_2.fastq.gz 1555a8bc81b309f41b1fe13bc8b4101b;487a61ba3cac0b60f255c0649b006283 119879205;124497439 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 19361117 ERR2204594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204594/ERR2204594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204594/ERR2204594_2.fastq.gz d38b2c23c3fef1abbd1cc8105b8b4273;2b464e14f4a9929566309773ded25432 757265463;844538948 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6031347 ERR2204595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204595/ERR2204595_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204595/ERR2204595_2.fastq.gz 878d9894c2082cadab067635925ae467;fe8beda9dd47672cdc9b3bf428608f48 268254284;277665336 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 74254578 ERR2204596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204596/ERR2204596_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204596/ERR2204596_2.fastq.gz e1dd6d297a4a1a202862968cf5c669bc;1c9b4637e29cd520bd85de7075896412 2910159663;3226831974 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_14 ENA PRJEB23438 ERS2020215 14CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 981162 ERR2204631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204631/ERR2204631_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204631/ERR2204631_2.fastq.gz 8a097e8f8caffe4e0f33540098de6b1a;8221f6ed20712c1ead4625d17de20fbf 69894716;73281227 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 577367 ERR2204597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204597/ERR2204597_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204597/ERR2204597_2.fastq.gz d47787f35e3ebce8c073a371cc5360cf;b241cf7cb732bf3992e2eac65df8bc74 25637563;26399817 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 14997696 ERR2204598 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204598/ERR2204598_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204598/ERR2204598_2.fastq.gz bd698f65555275a4d38ca4250cb47fe2;c64b02cab1fe2c4ce6aa2e798f40511e 660330988;682138668 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1181985 ERR2204638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204638/ERR2204638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204638/ERR2204638_2.fastq.gz 8b4fd0536b20aa38ba3d09d0689cdbe3;c8606caa62f614cdc2ee684cad922553 85531586;90190057 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3202080 ERR2204668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204668/ERR2204668.fastq.gz d958171b1de1cdef41c9422e45af3a9c 119359197 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3168908 ERR2204669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204669/ERR2204669.fastq.gz fcb150b58749b64b3b5e9877b529697a 119016634 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 119654 ERR2204670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204670/ERR2204670.fastq.gz 8c21bba078ba6560e59858f8775a0011 4419107 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_20 ENA PRJEB23438 ERS2020221 20CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 116780 ERR2204671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204671/ERR2204671.fastq.gz 58bff0268c5718ed3f6f4adeb46d1282 4337045 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16924071 ERR2204609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204609/ERR2204609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204609/ERR2204609_2.fastq.gz d85a0e68545f51921c400af4be33abdc;011b4fda9819a1b70fe98268b2ad8955 742874757;768409849 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 24390623 ERR2204610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204610/ERR2204610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204610/ERR2204610_2.fastq.gz 2e842a9d2ed825b0fd1b2ff6eecf3e3c;e87e9914955ed194b320ffd79cf925f6 1062903912;1100055902 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 854434 ERR2204643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204643/ERR2204643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204643/ERR2204643_2.fastq.gz 1a0960477d587405c5dfd17d548fbf5b;4c35b72abc9308f03363dba3009f52d6 61634115;63692163 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1917888 ERR2204672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204672/ERR2204672.fastq.gz 6cd2332dbeb46759c3ae5c1f4c850b7c 71127869 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1885751 ERR2204673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204673/ERR2204673.fastq.gz 23582973725f78afc83549dbafcca994 70429217 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1450047 ERR2204674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204674/ERR2204674.fastq.gz b7e7cb60ed0cef1a87075108c70a97e7 53957393 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_34 ENA PRJEB23438 ERS2020226 34CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1424736 ERR2204675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204675/ERR2204675.fastq.gz 06b96a4ce0d24a88cbb22a91f1db82a8 53371892 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 861998 ERR2204611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_2.fastq.gz e97363c161e90082e6eb8fa53a3b8a58;939c0a52c40cec8b8cefdb38851435ba 39871514;41647617 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 28118462 ERR2204612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_2.fastq.gz ddfc21cae3d74b9d1c80f06f8115a71b;2b337c73947e90b37b4006bfed0e3fb5 1144496374;1271866282 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2863375 ERR2204613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_2.fastq.gz c3c2cd5a50992713d7ed50f5b91dd97b;eb94f2bba3435db0075a3b6fda474505 131797035;136207848 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 96106710 ERR2204614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_2.fastq.gz cdcbb32ff04e32423a6d04609a70870e;f010594dfbd557e727f45ed8fd262db3 3851279631;4247569192 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_35 ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 994328 ERR2204644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_2.fastq.gz 73d0b651d0d03c55e2dddbe75d77dd9d;0c02751f3c5e30e5c43e352edc178964 73031399;75636413 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 21027208 ERR2204615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204615/ERR2204615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204615/ERR2204615_2.fastq.gz 12c0ab7606b36ca81047ed54b874af05;40f355aa1259ce1c9377a65344333adb 925834055;956189585 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 20646985 ERR2204616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204616/ERR2204616_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204616/ERR2204616_2.fastq.gz cf8a5144f707efa138684ee90c830bf3;664b010158b61047668de9cfc4f8772d 908566948;947660407 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1321538 ERR2204645 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204645/ERR2204645_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204645/ERR2204645_2.fastq.gz 386a7c47891422541a7792a6af88aee1;50fc79d910e4cb12deb99af7420f7e23 98100851;101277610 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1391859 ERR2204676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204676/ERR2204676.fastq.gz 3342810b95d187d398bbcb60a0684923 52304587 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1354167 ERR2204677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204677/ERR2204677.fastq.gz 2d551803bd0c8bdf0bf57830f365fba0 51250501 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1597821 ERR2204678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204678/ERR2204678.fastq.gz f53fb604d8d0aafd6d751daa9cadfcfe 60289525 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_36 ENA PRJEB23438 ERS2020228 36CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1573913 ERR2204679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204679/ERR2204679.fastq.gz bcd3d94184ed71e1117596650485a10b 59774068 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 2922105 ERR2204617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204617/ERR2204617_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204617/ERR2204617_2.fastq.gz 0a5b696986baee082e69c4798635a717;e27ed32bbcf4d740332c3c163e4e6311 130308982;135057272 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5352349 ERR2204618 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204618/ERR2204618_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204618/ERR2204618_2.fastq.gz c956551b50f34769d279a173b41468e3;dc5e76767a87f3f29c6249a0e06ea794 243443370;250367589 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1021441 ERR2204646 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204646/ERR2204646_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204646/ERR2204646_2.fastq.gz c4dc9c1654647ea32dc67350de45e987;3a1e2b7c23048ea7675806778e5708f5 74114462;77928495 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2393094 ERR2204680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204680/ERR2204680.fastq.gz 1719d84aa05dfcd9801cf3d28ad18018 90786171 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2366898 ERR2204681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204681/ERR2204681.fastq.gz 9fbf2f2abc5cd6b4fd534288ab4b4314 90382769 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1254539 ERR2204682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204682/ERR2204682.fastq.gz e5d739c025f7442a2c5b82947b27f43a 46351621 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_37 ENA PRJEB23438 ERS2020229 37CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1234164 ERR2204683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204683/ERR2204683.fastq.gz c3386b39fb51699302f69cc918e24469 45908898 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 7535279 ERR2204619 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204619/ERR2204619_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204619/ERR2204619_2.fastq.gz c5bb9581faecaf63decc7c1af3d09b1b;fa29307a63d8776b46b401461d32fe32 328069124;340863827 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 44179809 ERR2204620 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204620/ERR2204620_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204620/ERR2204620_2.fastq.gz 64cd6863184fa26b0c5bbb13c0c29050;06a6a719e4c890044b1a3249e5a8c875 1941216627;2010362420 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 955924 ERR2204647 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204647/ERR2204647_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204647/ERR2204647_2.fastq.gz be4dfb07d71941c8b990b688ede1d2a2;967fc1a4ea50a3bd60428876b58a5e6f 68772346;71394741 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3579274 ERR2204684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204684/ERR2204684.fastq.gz 29d6b3445575748530f5db455009679a 132753967 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3508844 ERR2204685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/005/ERR2204685/ERR2204685.fastq.gz a48e8c31994639a9a7273008ec0d3720 131105624 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 560097 ERR2204686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/006/ERR2204686/ERR2204686.fastq.gz 14f1f9e84150163898895a7743f97fb5 20503117 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_38 ENA PRJEB23438 ERS2020230 38CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 550363 ERR2204687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/007/ERR2204687/ERR2204687.fastq.gz abbe0c27d03ccbf05c4f1cce14e6d0af 20293793 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 16122848 ERR2204621 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204621/ERR2204621_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204621/ERR2204621_2.fastq.gz dede134e78290732ff3677c78aeeb167;43be82cf3773445a540e94683c67080c 710461925;729569139 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 18986544 ERR2204622 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204622/ERR2204622_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204622/ERR2204622_2.fastq.gz fb01ed8ff925b65bc5013f43b09c8935;2d1cbd6a17eaf41b5effd164220d0562 825747399;858530340 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 1003303 ERR2204648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204648/ERR2204648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204648/ERR2204648_2.fastq.gz 99fdb38e0c13ea905dba5a691237ac37;97d93fd993898f2acb66c53e5bfd4ca9 73521776;76929972 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1308229 ERR2204688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/008/ERR2204688/ERR2204688.fastq.gz ebc1998e52d61e4a2e77a92cd77d75b7 48286986 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CUDG double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1286988 ERR2204689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/009/ERR2204689/ERR2204689.fastq.gz b9bc8229a4e69eab4a5aa7fca599956b 47848588 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1171960 ERR2204690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/000/ERR2204690/ERR2204690.fastq.gz 4df63d7c6d179369c647476d0d8e6176 43609405 +Vagene2018 2018 10.1038/s41559-017-0446-6 Tepos_41 ENA PRJEB23438 ERS2020231 41CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1146901 ERR2204691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204691/ERR2204691.fastq.gz 3b8ef127dfa5bbfd5b4cf814a7d1e83e 42972344 +Kilinc2021 2021 10.1126/sciadv.abc4587 Anosovo-1 (irk050) ENA PRJEB39378 ERS4827048 unspecified double Unknown none HiSeq X Ten SINGLE WGS 8087397 ERR4354257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR435/007/ERR4354257/ERR4354257.fastq.gz 328829bfd2ffd1415effe42361c4218b 377979745 +Kilinc2021 2021 10.1126/sciadv.abc4587 Kamenka-2 (yak023) ENA PRJEB39378 ERS4827062 unspecified double Unknown none HiSeq X Ten SINGLE WGS 22137832 ERR4354263 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR435/003/ERR4354263/ERR4354263.fastq.gz 84838ec2787a2cc7c97c215cf68d36b2 1153017002 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1216146 ERR3341156 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341156/ERR3341156.fastq.gz c5e83c8b318f88fe8810fdaec8bbf953 50822190 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1193618 ERR3341157 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341157/ERR3341157.fastq.gz 8ac0537ec86ff13d5551eea99f67d812 49837853 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1225618 ERR3341158 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341158/ERR3341158.fastq.gz 16f69430c41a88eeb2788b50f794d22c 52990676 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1215495 ERR3341159 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341159/ERR3341159.fastq.gz 7773b4335dfeb4015fb6c50dd38d010c 52402022 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1038275 ERR3341160 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341160/ERR3341160.fastq.gz 3b69d84db20a47417df9c5e338537d87 46827195 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1010048 ERR3341161 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341161/ERR3341161.fastq.gz 3d19eb4ad06a56f7ec42275e5c172f69 45550747 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1125689 ERR3341162 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341162/ERR3341162.fastq.gz 3f13d445781d6881661e94b283091be7 49897517 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1075581 ERR3341163 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341163/ERR3341163.fastq.gz 4ff046d98ab4fb5623acf6e4aa91b965 48265109 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1063262 ERR3341164 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341164/ERR3341164.fastq.gz fbe3d0f139846aa7663dcb353ed5ac84 47557811 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1189440 ERR3341165 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341165/ERR3341165.fastq.gz 98c652081aef5375bae8eaca014882f3 51944903 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1141471 ERR3341166 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341166/ERR3341166.fastq.gz 4a8a9d4927aed9021407981a97b1b93d 49898438 +Keller2019 2019 10.1073/pnas.1820447116 DIT003.B ENA PRJEB29991 ERS3465379 DIT003.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1094833 ERR3341167 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341167/ERR3341167.fastq.gz 6199735d51d3de20fce203c497faa125 49063783 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5457082 ERR3341117 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341117/ERR3341117_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341117/ERR3341117_2.fastq.gz 5c57ba33bf588493d474c5a9989c221d;165c1dd2899068d993200f26bb4a1c2c 192001595;195456042 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 71283853 ERR3341168 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341168/ERR3341168.fastq.gz 05aada71b711573794eb04a4243dd268 2465759116 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 408763 ERR3341169 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341169/ERR3341169.fastq.gz bac458aa77e1cb4cf9fd1bde08335500 17856672 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 402035 ERR3341170 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341170/ERR3341170.fastq.gz f8f3cffd72f33408682dfceb37550af2 17543952 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 410982 ERR3341171 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341171/ERR3341171.fastq.gz dc658314c79f1eb8f39880e4358608d2 18547040 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 407232 ERR3341172 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341172/ERR3341172.fastq.gz de90a0e27916cacdbc6933a5fb0c57d2 18337622 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 348352 ERR3341173 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341173/ERR3341173.fastq.gz 91e27f543582c36e1b79d27f1d843d98 16306350 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 338348 ERR3341174 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341174/ERR3341174.fastq.gz 454a8c4bc98dda49cfaef75927465157 15839671 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 378480 ERR3341175 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341175/ERR3341175.fastq.gz 505343e08c506072c8b78fa7fccfdec8 17441857 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 362094 ERR3341176 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341176/ERR3341176.fastq.gz dfa9285ddcd2f905dcc55f03a83cb7ed 16891186 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 353675 ERR3341177 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341177/ERR3341177.fastq.gz 76de28278c5ca92bb7d23e19c81e35b9 16465794 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 394606 ERR3341178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341178/ERR3341178.fastq.gz ed197fd99218b0577e1f1379c9220fde 18010429 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 379035 ERR3341179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341179/ERR3341179.fastq.gz 307183dedb54071f172170d9701b2e90 17319267 +Keller2019 2019 10.1073/pnas.1820447116 DIT004 merged ENA PRJEB29991 ERS3465380,ERS3465381 DIT004.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 365586 ERR3341180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341180/ERR3341180.fastq.gz 8494f752aa026aab42142e9e34d59a82 17055014 +Keller2019 2019 10.1073/pnas.1820447116 EDI001.A ENA PRJEB29991 ERS3465382 EDI001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13240300 ERR3341118 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341118/ERR3341118_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341118/ERR3341118_2.fastq.gz 3c506bb4d1ba0aaeb5cd3ce7cde47c17;64a52e954b271bb13e780a85ff1b3608 499322371;566823443 +Keller2019 2019 10.1073/pnas.1820447116 EDI003.A ENA PRJEB29991 ERS3465383 EDI003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15662135 ERR3341119 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341119/ERR3341119_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341119/ERR3341119_2.fastq.gz 3ac9355f4f04c9142cd6d5707dc4ad7d;c9492b63dae4082c9ffdf4cea031acfc 608378922;683447219 +Keller2019 2019 10.1073/pnas.1820447116 EDI003.A ENA PRJEB29991 ERS3465383 EDI003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 54203005 ERR3341120 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341120/ERR3341120_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341120/ERR3341120_2.fastq.gz 07ce89461558cf7bce132e41b4ac81a7;fc3ee7f1b43f83d9315e611a8e348c8c 2191286701;2395085572 +Keller2019 2019 10.1073/pnas.1820447116 EDI004.A ENA PRJEB29991 ERS3465384 EDI004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15103629 ERR3341121 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341121/ERR3341121_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341121/ERR3341121_2.fastq.gz 4e6494e3b0e89182c111743e72d142ce;43e14d9436f0e1b859578e42fd382f4f 565920609;633320202 +Keller2019 2019 10.1073/pnas.1820447116 EDI004.A ENA PRJEB29991 ERS3465384 EDI004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 49081333 ERR3341122 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341122/ERR3341122_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341122/ERR3341122_2.fastq.gz c5f9dd7692f65a6e74b252423875419a;2b0475ec4eaf27d9b83c6b5b893c6924 1913727660;2112298237 +Keller2019 2019 10.1073/pnas.1820447116 EDI005.A ENA PRJEB29991 ERS3465385 EDI005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13981206 ERR3341123 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341123/ERR3341123_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341123/ERR3341123_2.fastq.gz 7b1481220cad4d78608f8f25ab77d673;fa1f113d9c80c6045660becf53e15576 525956736;579638618 +Keller2019 2019 10.1073/pnas.1820447116 LSD001.A ENA PRJEB29991 ERS3465386 LSD001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12827658 ERR3341124 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341124/ERR3341124_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341124/ERR3341124_2.fastq.gz c0cda251c9efd4ef7e19dc77a3beed4f;88d5859517c0ef05948ae0b0c063c78c 490227433;528351451 +Keller2019 2019 10.1073/pnas.1820447116 LSD001.A ENA PRJEB29991 ERS3465386 LSD001.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7800620 ERR3341125 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341125/ERR3341125_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341125/ERR3341125_2.fastq.gz 6123dae3963c42acc1f92f62a76edee0;7f068cae1fd542d0ca1f97da7edad119 286986137;307075271 +Keller2019 2019 10.1073/pnas.1820447116 LSD002.A ENA PRJEB29991 ERS3465387 LSD002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8200424 ERR3341126 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341126/ERR3341126_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341126/ERR3341126_2.fastq.gz 06fd8abb3fa562ad317ed46fc1a343aa;df9235ab498a584709b86981493ea4ec 342402112;346441441 +Keller2019 2019 10.1073/pnas.1820447116 LSD007.A ENA PRJEB29991 ERS3465388 LSD007.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9622849 ERR3341127 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341127/ERR3341127_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341127/ERR3341127_2.fastq.gz 07935c347613e3ca6378271093f331a8;84bc6ead2f2a66e8234ed570c3c7f539 377610995;399031526 +Keller2019 2019 10.1073/pnas.1820447116 LSD007.A ENA PRJEB29991 ERS3465388 LSD007.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10474556 ERR3341128 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341128/ERR3341128_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341128/ERR3341128_2.fastq.gz 658e653fc447871a017f36229518f7f3;9eef751fd6969863dac9ccc42dd7ea38 420220636;444628592 +Keller2019 2019 10.1073/pnas.1820447116 LSD013.A ENA PRJEB29991 ERS3465389 LSD013.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9152230 ERR3341129 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341129/ERR3341129_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341129/ERR3341129_2.fastq.gz 1c6d5ae4e7318f1dda57a0716bb20275;afb4d9c5a9e22c202e95531479354d41 343850338;374258273 +Keller2019 2019 10.1073/pnas.1820447116 LSD019.A ENA PRJEB29991 ERS3465390 LSD019.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10232611 ERR3341130 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341130/ERR3341130_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341130/ERR3341130_2.fastq.gz 4699899f5c2f25e47678c0eb2ee81179;8c70baee3a35eb9cfbb583b9b47becf3 402522628;432203212 +Keller2019 2019 10.1073/pnas.1820447116 LSD019.A ENA PRJEB29991 ERS3465390 LSD019.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9170490 ERR3341131 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341131/ERR3341131_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341131/ERR3341131_2.fastq.gz 454e2ab429e3c9f1e2d2fa85e4c7a628;87c06b9d2ae381263bb10b4b2ced609a 369029070;402334808 +Keller2019 2019 10.1073/pnas.1820447116 LSD020.A ENA PRJEB29991 ERS3465391 LSD020.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11048609 ERR3341132 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341132/ERR3341132_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341132/ERR3341132_2.fastq.gz 1779e80616111ee81358c81205b9451f;3f90298c6c97567af1ee70725d618af0 417866911;438806156 +Keller2019 2019 10.1073/pnas.1820447116 LSD020.A ENA PRJEB29991 ERS3465391 LSD020.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11734905 ERR3341133 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341133/ERR3341133_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341133/ERR3341133_2.fastq.gz 31ddcadb394ad0b3d38140f8e324a372;2b925469e5e2b47cb6870a9a5751822d 427515167;444728959 +Keller2019 2019 10.1073/pnas.1820447116 LSD021.A ENA PRJEB29991 ERS3465392 LSD021.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8735508 ERR3341134 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341134/ERR3341134_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341134/ERR3341134_2.fastq.gz 2c491f149d1a603760ca1d80860ce8ee;94e84651564ba2c75fef27041fe56004 346026968;379225495 +Keller2019 2019 10.1073/pnas.1820447116 LSD021.A ENA PRJEB29991 ERS3465392 LSD021.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12071919 ERR3341135 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341135/ERR3341135_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341135/ERR3341135_2.fastq.gz 9cd14495d579f6ea1046c847c2f9a0af;32520193c1b80ed721dbf0348cee50c2 448535001;482294252 +Keller2019 2019 10.1073/pnas.1820447116 LSD022.A ENA PRJEB29991 ERS3465393 LSD022.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9243549 ERR3341136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341136/ERR3341136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341136/ERR3341136_2.fastq.gz 60bf8871523a12fa2a0985cf8837cd8a;106b4e80d73526dba8928df3b938e256 366396215;392306656 +Keller2019 2019 10.1073/pnas.1820447116 LSD023.A ENA PRJEB29991 ERS3465394 LSD023.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9419110 ERR3341137 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341137/ERR3341137_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341137/ERR3341137_2.fastq.gz aaef061379bbc08a493386e663bf758b;9cef6dc59f8b383ce66bae0f2ac63512 363812672;391877738 +Keller2019 2019 10.1073/pnas.1820447116 LSD023.A ENA PRJEB29991 ERS3465394 LSD023.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10946386 ERR3341138 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341138/ERR3341138_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341138/ERR3341138_2.fastq.gz 9299f04f2189056e6e109008a2e2d778;b45e647fdbaecbcd6b679dfcb840d7b5 436614709;479084787 +Keller2019 2019 10.1073/pnas.1820447116 LSD024.A ENA PRJEB29991 ERS3465395 LSD024.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9872445 ERR3341139 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341139/ERR3341139_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341139/ERR3341139_2.fastq.gz f147ac7a8273c0df87f3a463bc3755ae;f7c8256de38173aa5dde0805eacb5782 378676515;407561501 +Keller2019 2019 10.1073/pnas.1820447116 LSD024.A ENA PRJEB29991 ERS3465395 LSD024.A0101.YP2 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11529710 ERR3341140 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341140/ERR3341140_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341140/ERR3341140_2.fastq.gz bd6b50b03e919cef92c185a58bce624f;988d94928fffa57bd4e25cc283e92890 462329186;508394154 +Keller2019 2019 10.1073/pnas.1820447116 LSD026.A ENA PRJEB29991 ERS3465396 LSD026.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8520456 ERR3341141 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341141/ERR3341141_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341141/ERR3341141_2.fastq.gz 04efa5911540000730edb8dd379ae879;32cf00af941afcb557915fbc446b1661 332785633;351862597 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337433 ERR3341181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341181/ERR3341181.fastq.gz 721653c2448ea3905664a8f210d6a558 14187965 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330294 ERR3341182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341182/ERR3341182.fastq.gz 84b3d0a7359f30b390b2333da6365653 13880042 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 340109 ERR3341183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341183/ERR3341183.fastq.gz 9199b8e42c5ab981e204dab4b006a930 14799069 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337297 ERR3341184 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341184/ERR3341184.fastq.gz 90b21fb18adf96b5f9b0443821d63e06 14645114 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289661 ERR3341185 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341185/ERR3341185.fastq.gz 72c96f56690f7e5aa4e46cd403693b88 13126502 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284861 ERR3341186 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341186/ERR3341186.fastq.gz 0250b8dc05fd032c429a0f745b434c58 12906719 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 314399 ERR3341187 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341187/ERR3341187.fastq.gz 3675e6c3f406a287bdc8e7065d02554c 14018639 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 300470 ERR3341188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341188/ERR3341188.fastq.gz 0c3f7414791eb1f895da434e7a501f43 13555872 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 295806 ERR3341189 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341189/ERR3341189.fastq.gz ae4c1e823c26dfdfbafcc6fc437ca50a 13308504 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 329477 ERR3341190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341190/ERR3341190.fastq.gz 0b5500ad903a2e3af22cb505f401eecd 14476210 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316088 ERR3341191 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341191/ERR3341191.fastq.gz 87275183fb0403b67756eb3b586bd836 13915832 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 304234 ERR3341192 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341192/ERR3341192.fastq.gz d32114b0e7a838c790aa431d0e57c065 13702192 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4200120 ERR3341142 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341142/ERR3341142_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341142/ERR3341142_2.fastq.gz b4e10bf43b20a113572f0d565bb9a5f8;d6941f8a16e2810cf964843a2d8a1483 128782166;133709304 +Keller2019 2019 10.1073/pnas.1820447116 LVC001 merged ENA PRJEB29991 ERS3465397,ERS3465398 LVC001.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 15279872 ERR3341143 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341143/ERR3341143_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341143/ERR3341143_2.fastq.gz a92e1b9357158d8155752fa1e484a8ef;a0b405383c76d4369b37df240d6b7b77 458143212;460671413 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 313761 ERR3341193 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341193/ERR3341193.fastq.gz 9ab31d64b380498dd82f8642f9381a2e 13758923 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 308159 ERR3341194 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341194/ERR3341194.fastq.gz 23e2a01b5d622adb0b210888fed3959d 13516598 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 309095 ERR3341195 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341195/ERR3341195.fastq.gz 765b5ea33eec31182af90c91d03de90d 13982154 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 305424 ERR3341196 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341196/ERR3341196.fastq.gz a25c55770cb5ee1e0b32d5af3e467697 13800549 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 260485 ERR3341197 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341197/ERR3341197.fastq.gz 188e350879c58fb6c3d90e8aadd43d65 12321291 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 253861 ERR3341198 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341198/ERR3341198.fastq.gz 9a47318e81cd4b61a610afee4b1eef8c 12023715 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 285320 ERR3341199 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341199/ERR3341199.fastq.gz 0ee7d474245c43fcf111637e9cae898f 13301110 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 269073 ERR3341200 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341200/ERR3341200.fastq.gz aaa3c6823f313a2aed5350a336291418 12723639 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 268626 ERR3341201 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341201/ERR3341201.fastq.gz a6679359720c3532bfebd321b165c02c 12619790 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303859 ERR3341202 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341202/ERR3341202.fastq.gz 57c0c8f5ff4bc75bcb111be5a7eb48b7 13931538 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 288202 ERR3341203 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341203/ERR3341203.fastq.gz 90a82a00c2254e2ac59db8242b438794 13275464 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 276536 ERR3341204 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341204/ERR3341204.fastq.gz 3784182e2e0d28eca719c2c138766467 12990642 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 342478 ERR3341205 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341205/ERR3341205.fastq.gz 5d55d508f7b36e4fdbdeb9fcc8e219b8 14651730 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337312 ERR3341206 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341206/ERR3341206.fastq.gz 0d8b8095f64978c126cca140cfb129b1 14407708 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 343851 ERR3341207 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341207/ERR3341207.fastq.gz 08f66fd854728cfd6851812627aa6dd3 15212782 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 342419 ERR3341208 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341208/ERR3341208.fastq.gz 16ef7c43a9d6d236a4533308025e44ae 15106750 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289992 ERR3341209 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341209/ERR3341209.fastq.gz 84225fd17a241953e04424de60e92a4d 13328867 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284058 ERR3341210 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341210/ERR3341210.fastq.gz fd707ace78eec0de6817504f66282b6d 13065310 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316879 ERR3341211 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341211/ERR3341211.fastq.gz 648e987331519fe2722f674abf5c183a 14341852 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303039 ERR3341212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341212/ERR3341212.fastq.gz 027fcc0d4ecb30f4dc317f92743a30b8 13893140 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 298547 ERR3341213 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341213/ERR3341213.fastq.gz d3a6a57119b78a945797b747087ccc7a 13650024 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332989 ERR3341214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341214/ERR3341214.fastq.gz 87bf6d8fcf8f1d66b14d70e114b676f1 14882229 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 320153 ERR3341215 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341215/ERR3341215.fastq.gz c08bad851d2a71d388fe5e821de8ef06 14332133 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.B0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 305894 ERR3341216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341216/ERR3341216.fastq.gz a01568b40cc62b16e16dba3487b8ce2d 13986137 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5151778 ERR3341144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341144/ERR3341144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341144/ERR3341144_2.fastq.gz e636816a1f3b8e7edf0c5788b13c6b19;094ba0d85f943889ceff3149665ec5e5 167076787;167246096 +Keller2019 2019 10.1073/pnas.1820447116 LVC005 merged ENA PRJEB29991 ERS3465399,ERS3465400,ERS3465401 LVC005.C0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 18196950 ERR3341145 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341145/ERR3341145_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341145/ERR3341145_2.fastq.gz f1c0d8e0722ada11f3446a75bbc36be1;3f4bcb2f30a886b503effb839896fe59 568090244;556275886 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 414275 ERR3341217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341217/ERR3341217.fastq.gz 6fdab1998a1c3f3e46664be94a0b402d 17654704 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 409102 ERR3341218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341218/ERR3341218.fastq.gz 425f4cf2913ccc7efad8e7c0f8c2c0bf 17432546 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 419504 ERR3341219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341219/ERR3341219.fastq.gz c7545a6d9210d157f5cd6664f0e0c9a9 18502523 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 415867 ERR3341220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341220/ERR3341220.fastq.gz 96e7445122f2dc110d1d9e260337c9d8 18301274 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 355152 ERR3341221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341221/ERR3341221.fastq.gz 031fe8e6b2bd879fed8dcb1a5a62c6b0 16301291 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 348369 ERR3341222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341222/ERR3341222.fastq.gz 8b171804f38c8d9160950aaf4be85ede 15979607 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 385376 ERR3341223 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341223/ERR3341223.fastq.gz a8550589794de621a0245cca718fda15 17387680 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372068 ERR3341224 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341224/ERR3341224.fastq.gz 63436bdc1cefc554b02a3d4dda09f011 17002118 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 364921 ERR3341225 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341225/ERR3341225.fastq.gz b4188442421ccb18d16bd381bad26bb8 16607429 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 403523 ERR3341226 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341226/ERR3341226.fastq.gz 0d05c70288080a9d973399def702efac 17968496 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 389673 ERR3341227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341227/ERR3341227.fastq.gz ce0852370284933682a90791bf991554 17376972 +Keller2019 2019 10.1073/pnas.1820447116 LVC006.A ENA PRJEB29991 ERS3465402 LVC006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 373401 ERR3341228 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341228/ERR3341228.fastq.gz e74b82a5e61f7832f8391fcb2202f717 17043545 +Keller2019 2019 10.1073/pnas.1820447116 PET004.A ENA PRJEB29991 ERS3465404 PET004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7203683 ERR3341146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341146/ERR3341146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341146/ERR3341146_2.fastq.gz 9f3b5e76f0f204bd399a861659e79fc0;4c33bae8290b459ae0937c28dfe6f84a 261686052;266311101 +Keller2019 2019 10.1073/pnas.1820447116 PET004.A ENA PRJEB29991 ERS3465404 PET004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 55960135 ERR3341229 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341229/ERR3341229.fastq.gz 2e413be9481bf462aec401e6a9070d82 1985318316 +Keller2019 2019 10.1073/pnas.1820447116 PET005.A ENA PRJEB29991 ERS3465405 PET005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4909123 ERR3341147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341147/ERR3341147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341147/ERR3341147_2.fastq.gz a87fe8c74d73822bedc6bbe62749dbee;e6abdd61735d1b99b13857b82c5f5b81 179461167;184388550 +Keller2019 2019 10.1073/pnas.1820447116 PET005.A ENA PRJEB29991 ERS3465405 PET005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 94267093 ERR3341230 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341230/ERR3341230.fastq.gz af0b00f56756712d2a8b002c99a0d2c6 3384003588 +Keller2019 2019 10.1073/pnas.1820447116 PET006.A ENA PRJEB29991 ERS3465406 PET006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4962456 ERR3341148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341148/ERR3341148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/008/ERR3341148/ERR3341148_2.fastq.gz 089291bebaaf0b0fab0d617a551a39e4;662549560e9c9ac4baee512736e8edfe 177888268;181165912 +Keller2019 2019 10.1073/pnas.1820447116 PET006.A ENA PRJEB29991 ERS3465406 PET006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 51590501 ERR3341231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341231/ERR3341231.fastq.gz 7118570cfd54fc2819bb85fa1b47e586 1806647219 +Keller2019 2019 10.1073/pnas.1820447116 UNT002.A ENA PRJEB29991 ERS3465407 UNT002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3960713 ERR3341149 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341149/ERR3341149_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/009/ERR3341149/ERR3341149_2.fastq.gz 270f608a1c4d045a9fbc38b7ba8a1404;ee92c33a057abaf40aa619c38e9297d5 145862631;151564730 +Keller2019 2019 10.1073/pnas.1820447116 UNT002.A ENA PRJEB29991 ERS3465407 UNT002.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 93163484 ERR3341232 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341232/ERR3341232.fastq.gz 1aa36f4e8471db60cdbefcab51cefdda 3359179573 +Keller2019 2019 10.1073/pnas.1820447116 UNT003.A ENA PRJEB29991 ERS3465408 UNT003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4075646 ERR3341150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341150/ERR3341150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/000/ERR3341150/ERR3341150_2.fastq.gz 83b2f6dcd894e662e1a1eea539382dc6;2a5a6fc194e0b05514fc96944a1a5607 150147546;157702331 +Keller2019 2019 10.1073/pnas.1820447116 UNT003.A ENA PRJEB29991 ERS3465408 UNT003.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 38688573 ERR3341233 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341233/ERR3341233.fastq.gz 834fe15859229d551d5e2845d37e8f2c 1396529839 +Keller2019 2019 10.1073/pnas.1820447116 UNT004.A ENA PRJEB29991 ERS3465409 UNT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4139567 ERR3341151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341151/ERR3341151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/001/ERR3341151/ERR3341151_2.fastq.gz c9819f94cc56e76244fe2ee916dd2a13;a110ce4bfbeda5efc7665c394e8b3cc8 149492746;155589180 +Keller2019 2019 10.1073/pnas.1820447116 UNT004.A ENA PRJEB29991 ERS3465409 UNT004.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28257946 ERR3341234 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341234/ERR3341234.fastq.gz 74460c176bf094fb81f88639d288e6d5 993703599 +Keller2019 2019 10.1073/pnas.1820447116 UNT005.A ENA PRJEB29991 ERS3465410 UNT005.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3665895 ERR3341152 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341152/ERR3341152_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/002/ERR3341152/ERR3341152_2.fastq.gz 48a4138b6d3784ae38ed1adb57c0f58c;4c99fa8d1f4629d1051e942e571e1303 134105815;139631926 +Keller2019 2019 10.1073/pnas.1820447116 UNT006.A ENA PRJEB29991 ERS3465411 UNT006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3950908 ERR3341153 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341153/ERR3341153_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/003/ERR3341153/ERR3341153_2.fastq.gz 796c176c1ea432fb41be293bc5bdcba3;faccfd6e0cbcf1ec8de71cdf023b2a65 144786194;149764467 +Keller2019 2019 10.1073/pnas.1820447116 UNT006.A ENA PRJEB29991 ERS3465411 UNT006.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 97645916 ERR3341235 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341235/ERR3341235.fastq.gz b91026910bbc5fd30d7cdd388ab616fb 3482398837 +Keller2019 2019 10.1073/pnas.1820447116 VAL001.B ENA PRJEB29991 ERS3465403 VAL001.B0102.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4325927 ERR3341154 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341154/ERR3341154_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/004/ERR3341154/ERR3341154_2.fastq.gz 18ed16e4e05d7eff9c52214a1aaa130e;c949c8ffaa1fe28536a8bd17bc98febe 153736170;156407857 +Keller2019 2019 10.1073/pnas.1820447116 VAL001.B ENA PRJEB29991 ERS3465403 VAL001.B0102.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 64253449 ERR3341236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/006/ERR3341236/ERR3341236.fastq.gz 9ba33e2545323285b4e6422e0f47e038 2233897849 +Keller2019 2019 10.1073/pnas.1820447116 WAG001.A ENA PRJEB29991 ERS3465412 WAG001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3455999 ERR3341155 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341155/ERR3341155_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/005/ERR3341155/ERR3341155_2.fastq.gz 4fefec04c0596a5778deb3ca7bcd4e53;a845640cf66bc875ef0a3e82f64d85c7 129212241;132652236 +Keller2019 2019 10.1073/pnas.1820447116 WAG001.A ENA PRJEB29991 ERS3465412 WAG001.A0101.YP1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 78170904 ERR3341237 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR334/007/ERR3341237/ERR3341237.fastq.gz 44bcaca08ae0eb18fdf483c59e154cde 2822415925 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1429 ENA PRJEB41353 ERS5335226 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 544611092 ERR4845178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/008/ERR4845178/ERR4845178.fastq.gz 211a8e3da724938397e0ed70cde43ce7 24825310265 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1510 ENA PRJEB41353 ERS5335227 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 15763343 ERR4845180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/000/ERR4845180/ERR4845180.fastq.gz 39a2c2717259d63d6a0bc8bc1887c3b5 750879070 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1558 ENA PRJEB41353 ERS5335228 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 641527718 ERR4845181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/001/ERR4845181/ERR4845181.fastq.gz 7116ac5df4f4a41e01d1b1a47f1ea592 27797999211 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1579 ENA PRJEB41353 ERS5335229 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 533324715 ERR4845182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/002/ERR4845182/ERR4845182.fastq.gz 0cd3c58a537a3b586bfec536f6ae44a8 37090052158 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1599 ENA PRJEB41353 ERS5335230 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 6435352 ERR4845110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/000/ERR4845110/ERR4845110.fastq.gz 387b1905b9773d2113c7207f51c39a5b 313238939 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1600 ENA PRJEB41353 ERS5335231 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 530411412 ERR4845295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/005/ERR4845295/ERR4845295.fastq.gz 77070b2bb01098029d6e59f9adfece46 20188538743 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1607 ENA PRJEB41353 ERS5335232 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 184903636 ERR4845296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/006/ERR4845296/ERR4845296.fastq.gz 6be11d2282fdbf0a4967fbdca90618dd 7490843625 +Haller2021 2021 10.1016/j.isci.2021.102419 HGH-1638 ENA PRJEB41353 ERS5335233 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE WGS 133292730 ERR4845297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR484/007/ERR4845297/ERR4845297.fastq.gz 5b3f16d6a291398ce3c7d919bce7199b 5112902243 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Ellwangen 549_O ENA PRJEB29990 ERS3607398 ELW098.A0101_549O double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 45435815 ERR3457591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457591/ERR3457591.fastq.gz 3420b4da37a51dd9a356e4f6876c07d5 1665090988 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Ellwangen 549_O ENA PRJEB29990 ERS3607398 ELW098.A0101_549O double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4322824 ERR3457862 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457862/ERR3457862_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457862/ERR3457862_2.fastq.gz a84a9ca8a7915bc3e7f7333ccfaf1fcc;d3940c5a32493c8e8f6e832eba8b3ed6 160228111;166478530 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4110771 ERR3457583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457583/ERR3457583.fastq.gz 286870fd5021ccc01c693cb4487430fc 299204372 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4197705 ERR3457584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457584/ERR3457584.fastq.gz 3ca0e46ef0ff30c0092778814c879d9b 295480906 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4039569 ERR3457585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457585/ERR3457585.fastq.gz fdd8a52f75ff8192aeb25531218c1dda 301089527 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 4165912 ERR3457586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457586/ERR3457586.fastq.gz e01b15fcff4218b90f606016e0b4a920 306793635 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED030.A0102 ENA PRJEB29990 ERS3607393 BED030.A0102_8127 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3208396 ERR3457857 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457857/ERR3457857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457857/ERR3457857_2.fastq.gz 381edeeccc80768d5936ceab0c07eac5;4747ffb6e756060a9b63add765095d67 131124372;140929609 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED028.A0102 ENA PRJEB29990 ERS3607392 BED028.A0102_8103 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 23606891 ERR3457582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457582/ERR3457582.fastq.gz abe24bb46ac2c2fb954a763df14a9b08 878579766 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED028.A0102 ENA PRJEB29990 ERS3607392 BED028.A0102_8103 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4826853 ERR3457856 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457856/ERR3457856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457856/ERR3457856_2.fastq.gz 51bceecde05409f212df88477ea10e4e;22247653aff4eadd08444cd7879aaf72 182995861;193347261 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED034.A0102 ENA PRJEB29990 ERS3607394 BED034.A0102_8198 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 26579060 ERR3457587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457587/ERR3457587.fastq.gz 13800449fb6acb0dfd177c32c46651d4 1008043470 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED034.A0102 ENA PRJEB29990 ERS3607394 BED034.A0102_8198 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3425659 ERR3457858 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457858/ERR3457858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457858/ERR3457858_2.fastq.gz ea5aefc7a55dba053e8102c333ebd041;ea60ffa834916e5f32857bd5284eeb9d 133094381;139480463 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED024.A0102 ENA PRJEB29990 ERS3607391 BED024.A0102_8052 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7723948 ERR3457581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457581/ERR3457581.fastq.gz 19f8a1392b2c21a5c65cb4149a89583f 292044830 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED024.A0102 ENA PRJEB29990 ERS3607391 BED024.A0102_8052 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3643540 ERR3457855 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457855/ERR3457855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457855/ERR3457855_2.fastq.gz 3ba39f5a44778a0606a9a3772cea8d8e;f8463662126f8e6ee01ec249cc9a6067 140152301;147690336 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED038.A0102 ENA PRJEB29990 ERS3607395 BED038.A0102_8216 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28179885 ERR3457588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457588/ERR3457588.fastq.gz 8ac4b2f4a9ce374db7843a40fe1322dc 1061202233 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BED038.A0102 ENA PRJEB29990 ERS3607395 BED038.A0102_8216 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3656608 ERR3457859 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457859/ERR3457859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457859/ERR3457859_2.fastq.gz 08e182a1dcd310528197894f0af71979;d4e837bf013af9cc5a7faaa1dfd38e8c 140968617;147967338 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA001.A0101 ENA PRJEB29990 ERS3607396 BRA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17284600 ERR3457589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457589/ERR3457589.fastq.gz 14fd2bfe7399fdedec448e11bffea7d9 605128431 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA001.A0101 ENA PRJEB29990 ERS3607396 BRA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4366832 ERR3457860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457860/ERR3457860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457860/ERR3457860_2.fastq.gz 48259e7b755aa44e339709c49225c202;3c9fd523ff98c8e06904c89b0218372c 155140257;159509234 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA003.A0101 ENA PRJEB29990 ERS3607397 BRA003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 41502661 ERR3457590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457590/ERR3457590.fastq.gz 72730be1c933f9b3cb5d1222fea45c61 1528548420 +Spyrou2019 2019 10.1038/s41467-019-12154-0 BRA003.A0101 ENA PRJEB29990 ERS3607397 BRA003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3045571 ERR3457861 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457861/ERR3457861_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457861/ERR3457861_2.fastq.gz 6aaa2862b5baa55bfa9b4ca62c0612db;c285e5cd2a9f8d50fc6c76feafe8a1db 115704883;120515587 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI009.A0101 ENA PRJEB29990 ERS3607399 LAI009.A0101_RT88 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 20771222 ERR3457592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457592/ERR3457592.fastq.gz 3eef63faa39ba12d47ca97a72a34ce21 730453257 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI009.A0101 ENA PRJEB29990 ERS3607399 LAI009.A0101_RT88 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4389340 ERR3457863 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457863/ERR3457863_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457863/ERR3457863_2.fastq.gz c071d828740b98e60443c4252fc42c6c;4676ba81721d55f2083a659c7fb213a1 157656665;162524879 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI010.A0101 ENA PRJEB29990 ERS3607400 LAI010.A0101_RT89 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 65815041 ERR3457593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457593/ERR3457593.fastq.gz 631291fdb71dcdb86fcad4c2b9926dd2 2325127893 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LAI010.A0101 ENA PRJEB29990 ERS3607400 LAI010.A0101_RT89 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3797474 ERR3457864 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457864/ERR3457864_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457864/ERR3457864_2.fastq.gz 9780cae5807a5066d1f49f30a1f0ee2b;eaa76b2bc29b1eb74a98eb3f85cfa7ff 137461412;142074133 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 467251 ERR3457594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457594/ERR3457594.fastq.gz bea7fe8fcf6fec49fb64f435f491954e 22194474 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 454713 ERR3457595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457595/ERR3457595.fastq.gz ca17847e19a725c559c78d33268306ce 21541626 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 510112 ERR3457596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457596/ERR3457596.fastq.gz b724ecfe178107c3b6e84e6babf105ab 23623709 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 488676 ERR3457597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457597/ERR3457597.fastq.gz de4999f4f285b3bf919b4eac31415530 22704202 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 523492 ERR3457598 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457598/ERR3457598.fastq.gz 85f754812c980d5379895ce4a6b3f30c 23222419 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 516200 ERR3457599 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457599/ERR3457599.fastq.gz 9f4fb070cdad72ca6655d0cce60a8703 22869804 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 518872 ERR3457600 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457600/ERR3457600.fastq.gz 941c3b90765d9fc1164fbddfb4f5e22d 23725553 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 515783 ERR3457601 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457601/ERR3457601.fastq.gz f638521bc07803e12505cc59c9115e4e 23537846 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 440172 ERR3457602 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457602/ERR3457602.fastq.gz d7be66b1001a6a4d494239fa98ee9b2d 21045160 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 432657 ERR3457603 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457603/ERR3457603.fastq.gz 52540d7604c00f2d34b023e95ac7cda8 20685093 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 481342 ERR3457604 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457604/ERR3457604.fastq.gz 4b70f33fd3c5290284c30a4d386f38c8 22668994 +Spyrou2019 2019 10.1038/s41467-019-12154-0 LBG002.A0101 ENA PRJEB29990 ERS3607401 LBG002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 459468 ERR3457605 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457605/ERR3457605.fastq.gz e16b417cf2ac3970c506b68e5d644141 21909585 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 674838 ERR3457606 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457606/ERR3457606.fastq.gz 42cd2fcce9cfde7f58504025b9300b35 31567988 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 655431 ERR3457607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457607/ERR3457607.fastq.gz 1217444496f025b98ece48d860b2fe92 30596970 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 733295 ERR3457608 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457608/ERR3457608.fastq.gz 0eb8ef6fdecdbf75176117ea0e452697 33385798 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 701989 ERR3457609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457609/ERR3457609.fastq.gz 236d4bbd825566ba3bbb2316c730dbff 32040487 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 743480 ERR3457610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457610/ERR3457610.fastq.gz 7c50a20affe855a5711c0de6832cd62d 32439200 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 732773 ERR3457611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457611/ERR3457611.fastq.gz 906f87ab87f0f5ada23b51315ddea61e 31961427 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 745109 ERR3457612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457612/ERR3457612.fastq.gz 5a68b59a4d54ed35921006eaf3e533db 33564559 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 739705 ERR3457613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457613/ERR3457613.fastq.gz bb6431c360ef656776a18a5876ab4a1f 33212248 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 634030 ERR3457614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457614/ERR3457614.fastq.gz de52d2302b47dfce3507d77f1b607220 29882156 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 618744 ERR3457615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457615/ERR3457615.fastq.gz a34a154c467b2fae00fa75dbecad60f1 29183603 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 688450 ERR3457616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457616/ERR3457616.fastq.gz 8d53933cea5fcbc50bef989475566364 31929808 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN008.B0101 ENA PRJEB29990 ERS3607402 MAN008.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 657483 ERR3457617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457617/ERR3457617.fastq.gz 203c3b092ca36f666ca7324cee3093f4 30856827 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 106782 ERR3457618 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457618/ERR3457618.fastq.gz c0e443dc0450a25ed8f78a8a6856ffcb 5179005 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 104021 ERR3457619 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457619/ERR3457619.fastq.gz ee967916907d0b7bad0164d2a565b5d4 5041460 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 117809 ERR3457620 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457620/ERR3457620.fastq.gz 234a2220042b8ab73934498f9e8ed5a3 5575416 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 111773 ERR3457621 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457621/ERR3457621.fastq.gz e512efaebda3fb63980a770750d18fc9 5315198 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 122490 ERR3457622 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457622/ERR3457622.fastq.gz 829989dc81f55c71f3ca4048013ed091 5556614 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 120317 ERR3457623 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457623/ERR3457623.fastq.gz 0eee55ee051eb9ba80a9da09f41c37f3 5450605 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 119892 ERR3457624 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457624/ERR3457624.fastq.gz b841f38c5f9e51d81cd2e4dd5c5fe328 5591574 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 117633 ERR3457625 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457625/ERR3457625.fastq.gz b3f0a55d10001eb402e7efccf3cb104b 5479239 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 100919 ERR3457626 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457626/ERR3457626.fastq.gz d15e0c97a0e29eb2bc9752452b5c89dc 4927861 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 98883 ERR3457627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457627/ERR3457627.fastq.gz f6042c63aa3802c0e25c5e09a3c6c674 4840506 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 110500 ERR3457628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457628/ERR3457628.fastq.gz 1cf7399a787f8d577f395e7e796a6005 5326210 +Spyrou2019 2019 10.1038/s41467-019-12154-0 MAN015.A0101 ENA PRJEB29990 ERS3607403 MAN015.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 104436 ERR3457629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457629/ERR3457629.fastq.gz 44cb289057be64aae33e5dfe43a93e56 5106514 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB005.A/B0101 ENA PRJEB29990 ERS3607406 NAB005.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 57105166 ERR3457643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457643/ERR3457643.fastq.gz c3619e267fd43e5cbd3e21b10bdb67fa 2099624398 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB005.A/B0101 ENA PRJEB29990 ERS3607406 NAB005.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4317456 ERR3457866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457866/ERR3457866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457866/ERR3457866_2.fastq.gz a234c4f4fe683cbb48bae45cfa854843;66b8fa693ded924ba94b76e9f59e8671 162038278;169102617 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 499182 ERR3457630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457630/ERR3457630.fastq.gz 4cc596b910af1b8d67b43cb5e0a842e1 23570053 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 487483 ERR3457631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457631/ERR3457631.fastq.gz 69f8beb7e563393dd292ee309e58cefb 22970856 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 542481 ERR3457632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457632/ERR3457632.fastq.gz 7219092248bce2b1376361b784dff1e1 24975372 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521939 ERR3457633 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457633/ERR3457633.fastq.gz 36014c6a3eef46bdaa69e80faae40c7d 24076843 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 556855 ERR3457634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457634/ERR3457634.fastq.gz f72270380b5ee37de51a06577d60d77d 24570242 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 548880 ERR3457635 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457635/ERR3457635.fastq.gz d35cb86d0cf15c41b9fc57b5fe2dd303 24191849 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 557120 ERR3457636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457636/ERR3457636.fastq.gz 69de8774b15f063c457f9fd46d5656df 25352935 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 552942 ERR3457637 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457637/ERR3457637.fastq.gz 3c7578d223c989bfbb1eecc2b6004264 25092176 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 468620 ERR3457638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457638/ERR3457638.fastq.gz 26d92e69c184f69e49605d77920e8486 22293641 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 460779 ERR3457639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457639/ERR3457639.fastq.gz c3852b8e450d40e8da24b0fabf5d87c5 21914209 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 510670 ERR3457640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457640/ERR3457640.fastq.gz 0194a5745b6a8e4b421027af633a1f94 23916875 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB003.B0101 ENA PRJEB29990 ERS3607404 NAB003.B0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 490518 ERR3457641 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457641/ERR3457641.fastq.gz 22da1e68be08f1db54ebf886191ff61b 23237496 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB004.A0101 ENA PRJEB29990 ERS3607405 NAB004.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 79317839 ERR3457642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457642/ERR3457642.fastq.gz 4caacf9a019580098e3593058f835c2e 2851097712 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NAB004.A0101 ENA PRJEB29990 ERS3607405 NAB004.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4602536 ERR3457865 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457865/ERR3457865_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457865/ERR3457865_2.fastq.gz 54d368f3e82b859509aeefa857ef5cd2;1bf114ed85e42f77b349bdd85524c8f0 168409030;172421144 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS002.A0101 ENA PRJEB29990 ERS3607408 NMS002.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 58901955 ERR3457656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457656/ERR3457656.fastq.gz b2c25de15721f37fef4953cbcfe31131 2320185343 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS002.A0101 ENA PRJEB29990 ERS3607408 NMS002.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13469750 ERR3457867 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457867/ERR3457867_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457867/ERR3457867_2.fastq.gz 4ab5577e5639569ac1fb6394cd084d95;63f7ebcbe93b80ec9dd8a4347ffb1ddb 549976994;627803525 +Spyrou2019 2019 10.1038/s41467-019-12154-0 NMS003.A0101 ENA PRJEB29990 ERS3607409 NMS003.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13265717 ERR3457868 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457868/ERR3457868_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457868/ERR3457868_2.fastq.gz 2c24fccb3357b14910a2757e4a959ff0;f08725754f7a73edbf501962cd281246 540077704;615104009 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STA001.A0101 ENA PRJEB29990 ERS3607410 STA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 25808344 ERR3457657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457657/ERR3457657.fastq.gz e666999bea1ad374884d559c3c28d8e5 926174210 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STA001.A0101 ENA PRJEB29990 ERS3607410 STA001.A0101 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4322417 ERR3457869 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457869/ERR3457869_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457869/ERR3457869_2.fastq.gz c1318d61565c8de294e692404bb1896c;d73a53224a3905f46e5328c28a0df32d 159039161;165110724 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1285453 ERR3457754 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457754/ERR3457754.fastq.gz 7e8e6c4a17d2e0b4af710741a1cb31f9 61791046 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1250908 ERR3457755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457755/ERR3457755.fastq.gz 42821e30b399769561b4915b86cbf5fd 60024958 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1392514 ERR3457756 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457756/ERR3457756.fastq.gz b61e801dd4fbc4212c9723b718e60e49 65170276 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1341950 ERR3457757 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457757/ERR3457757.fastq.gz e8fe80d9ad1dde535d7c1647d78e2a25 62942061 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1419230 ERR3457758 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457758/ERR3457758.fastq.gz 735fe4f251fc27cea1e624595b61a806 63728406 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1399427 ERR3457759 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457759/ERR3457759.fastq.gz bfc7fbf0d8e3c2985a3c7567e9389f1d 62740356 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1424320 ERR3457760 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457760/ERR3457760.fastq.gz 6fd5724f19ded755a05c210cd2ea1587 65894531 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1416187 ERR3457761 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457761/ERR3457761.fastq.gz 304b46d332665e9baa316aeea31e42ee 65276109 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1201921 ERR3457762 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457762/ERR3457762.fastq.gz 381a243f7b0e9dae7d75bd8aa2f33af2 58274021 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1183241 ERR3457763 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457763/ERR3457763.fastq.gz 1a811097272601a82ca3d7d98d7653b5 57318218 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1310648 ERR3457764 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457764/ERR3457764.fastq.gz 2d0a369bf569305cb09961250f87264c 62465518 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN014.A0101 ENA PRJEB29990 ERS3607419 STN014.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 1256112 ERR3457765 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457765/ERR3457765.fastq.gz 43ea0c3976163c1727aa9652ca93bf77 60551683 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 605854 ERR3457790 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457790/ERR3457790.fastq.gz 38443503ed52176bd2e3c28a8e696710 29031693 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 589799 ERR3457791 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457791/ERR3457791.fastq.gz 038c2603c4318005d0d87e18102d856b 28221828 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 659845 ERR3457792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457792/ERR3457792.fastq.gz 5fd897950b15c4d8a5761e4dae3b1091 30828488 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 633851 ERR3457793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457793/ERR3457793.fastq.gz 440122574ba583a3c84e541048fff22d 29672071 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 671126 ERR3457794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457794/ERR3457794.fastq.gz 845f0279eea69c7266d84b92f8fd808e 30059793 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 660314 ERR3457795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457795/ERR3457795.fastq.gz 34c5afaaf7f46e0df1fa2f54ac9a2f0d 29548916 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 670089 ERR3457796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457796/ERR3457796.fastq.gz b4c8394a2bfb62f4cd5c9729a5dbadd4 30933393 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 666990 ERR3457797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457797/ERR3457797.fastq.gz f8b68dc08234e8eed7c955c4a6ca5754 30703320 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 569657 ERR3457798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457798/ERR3457798.fastq.gz 4c94230871ebf030a787b0887c39480f 27515998 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 559103 ERR3457799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457799/ERR3457799.fastq.gz 1eb66f27dcebfa74c56ebbda3157a8c8 27009222 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 618055 ERR3457800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457800/ERR3457800.fastq.gz 36936d3daf372e9539980795394a585d 29380806 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN020.A0101 ENA PRJEB29990 ERS3607422 STN020.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 591511 ERR3457801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457801/ERR3457801.fastq.gz a1cdf1d92fd4974403a49834f9f40a06 28461052 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 726833 ERR3457802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457802/ERR3457802.fastq.gz 264c0227547a07c785c112ba5c779358 35022145 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 707353 ERR3457803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457803/ERR3457803.fastq.gz 6060128605efa92621d876fc6a6d3e74 34038006 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 788331 ERR3457804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457804/ERR3457804.fastq.gz 42c3f57e15d13cd04735c71c46c81343 37035504 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 759637 ERR3457805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457805/ERR3457805.fastq.gz 15bf09b439a409ea6541eaf27e6b90e2 35759778 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 800946 ERR3457806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457806/ERR3457806.fastq.gz dd878cda86f4838378bf94a79eb3e9d5 36059673 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 791157 ERR3457807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457807/ERR3457807.fastq.gz 2404404524f86b6c9a963af7d7faedf2 35597498 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 803871 ERR3457808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457808/ERR3457808.fastq.gz 939f69b2f4a332d4461b0c988dc1227a 37306500 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 799387 ERR3457809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457809/ERR3457809.fastq.gz 45e776d81712795751f0cb1d542e8c94 37007816 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 680579 ERR3457810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457810/ERR3457810.fastq.gz 4fcc8e9582453bf49cd102fa4d281f28 33072977 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 668661 ERR3457811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457811/ERR3457811.fastq.gz 5a97d7e2e6967e9f4e719ebfb02e61f6 32482785 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 739300 ERR3457812 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457812/ERR3457812.fastq.gz 539ebd7deb904ff6238d8b004dfd4536 35333507 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN021.A0101 ENA PRJEB29990 ERS3607423 STN021.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 709780 ERR3457813 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457813/ERR3457813.fastq.gz ebcff3f1c42a48ac22249315cc838762 34348260 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 455424 ERR3457778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457778/ERR3457778.fastq.gz f7ef55c7b622d4b0ca48c3d71510092a 21941623 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 444225 ERR3457779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457779/ERR3457779.fastq.gz 8937254e306630b8fb7e5a32df3084ae 21365066 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 493051 ERR3457780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457780/ERR3457780.fastq.gz 731357526e7d59011747a78e281503b4 23150202 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 474510 ERR3457781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457781/ERR3457781.fastq.gz 328b0a12d1057ee5745a8fe1faa2e5c6 22334993 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 500927 ERR3457782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457782/ERR3457782.fastq.gz a00f0456900da1f5c7fcd369951b8e0e 22541337 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 493615 ERR3457783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457783/ERR3457783.fastq.gz e03dd9ebf81bfeda181761f29f26e244 22205614 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 500400 ERR3457784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457784/ERR3457784.fastq.gz d17bb311acf8b601d655d3d01224ac2c 23215084 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 499717 ERR3457785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457785/ERR3457785.fastq.gz be24037436572f060a4e89edef002425 23111727 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 428138 ERR3457786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457786/ERR3457786.fastq.gz cbb61d1e31a5f6e0a28adc4b3aa0f284 20796568 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 419173 ERR3457787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457787/ERR3457787.fastq.gz 7b013192ce8a2c9d822ec1ba481a7bb2 20368331 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 462107 ERR3457788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457788/ERR3457788.fastq.gz 54a8c6033dcb10bea56351094d3973d8 22084287 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN019.A0101 ENA PRJEB29990 ERS3607421 STN019.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 442881 ERR3457789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457789/ERR3457789.fastq.gz e34518c74ccd9ca6224c7c0dfe247999 21425799 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 557966 ERR3457694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457694/ERR3457694.fastq.gz 3b067bafe0370e14704c4452cbb520e0 26967995 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 534096 ERR3457695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457695/ERR3457695.fastq.gz 246f41c82e403fe9ff0b9cdf8c969e3c 25765056 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 607810 ERR3457696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457696/ERR3457696.fastq.gz 0f49399349fd5258ef5440042b7d8cbe 28604700 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 575318 ERR3457697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457697/ERR3457697.fastq.gz 83f7b9522a7545834ec575246370a95d 27154314 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 645703 ERR3457698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457698/ERR3457698.fastq.gz 6f30cbd709cfcddb360744096b46df9b 29202953 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 608102 ERR3457699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457699/ERR3457699.fastq.gz f7e1b7749990a789fd5f66c950a25e88 27391976 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 644519 ERR3457700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457700/ERR3457700.fastq.gz 55fc2ae801737a37c2393759a4b12171 29984482 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 612462 ERR3457701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457701/ERR3457701.fastq.gz 9debd7cded3fa48613679b23e4adf647 28353603 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 518593 ERR3457702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457702/ERR3457702.fastq.gz fd1fca3132672ad2fc0386448804c6fa 25277921 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 501849 ERR3457703 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457703/ERR3457703.fastq.gz 3e732a343d79e207dffe9192cd599961 24459902 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 568355 ERR3457704 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457704/ERR3457704.fastq.gz a334932c3d11f4d9e4a204f8fa2617a7 27264765 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN007.A0101 ENA PRJEB29990 ERS3607414 STN007.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 533829 ERR3457705 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457705/ERR3457705.fastq.gz 2a6c12978c5d28f1dd92802343201d41 25905768 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 567973 ERR3457658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457658/ERR3457658.fastq.gz f8db405c49fa07a353b77e9171a4e91a 27475124 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 553277 ERR3457659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457659/ERR3457659.fastq.gz cb253ddbffbb4d829ee82c106f7bb490 26746189 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 619358 ERR3457660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457660/ERR3457660.fastq.gz 8573628d6d0470b99f0f37c61570cec3 29204725 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 596226 ERR3457661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457661/ERR3457661.fastq.gz a66c08321d68281e3e2c3edca3a47529 28229603 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 632664 ERR3457662 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457662/ERR3457662.fastq.gz 0321f18cdf33f531ff78422afde660f4 28607365 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 623243 ERR3457663 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457663/ERR3457663.fastq.gz ac442029b36a9a38b605c7e920fbc11d 28182104 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 627098 ERR3457664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457664/ERR3457664.fastq.gz 8f661245b9ad37053a914c8181514a3e 29172827 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 625365 ERR3457665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457665/ERR3457665.fastq.gz 02c2b8d4ebc1e81d97bd7c2fb5513c28 29034384 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 531963 ERR3457666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457666/ERR3457666.fastq.gz 7a2014a6b097a95981cd2bcaed7887d4 25959572 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521086 ERR3457667 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457667/ERR3457667.fastq.gz 86244304a1a60468f7016e1876eb2c96 25427052 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 578209 ERR3457668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457668/ERR3457668.fastq.gz f0f77996f465814589b9c72c7e3474d7 27781843 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN002.A0101 ENA PRJEB29990 ERS3607411 STN002.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 554191 ERR3457669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457669/ERR3457669.fastq.gz 770e8bf8aa80299114e4fd1607fd11d1 26974051 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 359706 ERR3457706 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457706/ERR3457706.fastq.gz b6c50a4993c0275c71d6ea1744845dec 17261087 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 349372 ERR3457707 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457707/ERR3457707.fastq.gz 08e98001426ea6735b93e3ea5bc6ea01 16737394 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 391610 ERR3457708 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457708/ERR3457708.fastq.gz 6da2a9f9a9bbd957d6964c09a1ec1e0d 18340989 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 375269 ERR3457709 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457709/ERR3457709.fastq.gz ca3b6420e2996fdd84da3fc76d1c239e 17606259 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 401474 ERR3457710 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457710/ERR3457710.fastq.gz cd7b70bfccb612aef6417808d63f8e3d 18016402 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 395307 ERR3457711 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457711/ERR3457711.fastq.gz 134ef6f391f073a9af9264b32ec30f65 17711702 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 401614 ERR3457712 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457712/ERR3457712.fastq.gz ea554321c8328f704deb864ae2dd3fac 18575785 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 397728 ERR3457713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457713/ERR3457713.fastq.gz d74c91d394dc2a735e9e84faa1165da2 18340010 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 337062 ERR3457714 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457714/ERR3457714.fastq.gz 61d891ed6b1097c9c1413e69640b1ebb 16278711 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330098 ERR3457715 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457715/ERR3457715.fastq.gz e8a3d4a7455ee5725a22ea5b088c3276 15948085 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 367631 ERR3457716 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457716/ERR3457716.fastq.gz 22a6cae2210ae2a575351433b661380a 17488707 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN008.A0101 ENA PRJEB29990 ERS3607415 STN008.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 349898 ERR3457717 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457717/ERR3457717.fastq.gz 576c2fafb07b4faaf8f7394b9191b1ef 16848642 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 477351 ERR3457742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457742/ERR3457742.fastq.gz f9a752d9021484b9d43818ed389516f8 22791644 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 465913 ERR3457743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457743/ERR3457743.fastq.gz 81b24f5d4108c172aa5c55c6d4ec6523 22225329 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 521453 ERR3457744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457744/ERR3457744.fastq.gz 60bf32a4a524a583e82094b6b8682e18 24289527 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 498940 ERR3457745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457745/ERR3457745.fastq.gz ac32c204ef998052fc3ad3f89a5d52ba 23331900 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 530434 ERR3457746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457746/ERR3457746.fastq.gz 340e75f8bc6998fee1aa6b56a30c45c1 23702765 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 523423 ERR3457747 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457747/ERR3457747.fastq.gz 7e575b621f2317efe330a1462bef3ddc 23373204 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 529697 ERR3457748 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457748/ERR3457748.fastq.gz c2d59211245d9e86ba36f86c8b67d16c 24385696 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 526711 ERR3457749 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457749/ERR3457749.fastq.gz fbda556f0410edbc5dfd99fb79f712c8 24227164 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 450625 ERR3457750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457750/ERR3457750.fastq.gz b66fe98494b80fb4e860a31091af0651 21683784 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 441927 ERR3457751 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457751/ERR3457751.fastq.gz ecc806d5c4c9555ef37b1d8fade1cdcb 21276944 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 488978 ERR3457752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457752/ERR3457752.fastq.gz 48dbb5d6d3227693826528678a4bfec6 23169083 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN013.A0101 ENA PRJEB29990 ERS3607418 STN013.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 467322 ERR3457753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457753/ERR3457753.fastq.gz 6e125b1eec2dcee48cff5aaf94553835 22435618 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 754291 ERR3457718 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457718/ERR3457718.fastq.gz 96cd73bc82a99e720340e7c6c4f2e606 36093893 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 730495 ERR3457719 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457719/ERR3457719.fastq.gz c180af90f485baed0bd029b8c75c2bb0 34921722 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 817427 ERR3457720 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457720/ERR3457720.fastq.gz f5e3fe96c5a6f10617aba915cf4030a5 38115936 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 784701 ERR3457721 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457721/ERR3457721.fastq.gz e258ffd2e9d8a6834b06f1610c308319 36730890 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 837373 ERR3457722 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457722/ERR3457722.fastq.gz 87918de9e77d2ebb3b3048a93e25d354 37470792 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 823846 ERR3457723 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457723/ERR3457723.fastq.gz 08b23a31979e8b274bec6a75e8508ac3 36843920 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 832102 ERR3457724 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457724/ERR3457724.fastq.gz 0c4c6dd9acfe51f91475b803abc0c27c 38311731 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 824630 ERR3457725 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457725/ERR3457725.fastq.gz 3ac0e1e6cf1f2a94700294326dd558b3 37891463 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 703586 ERR3457726 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457726/ERR3457726.fastq.gz ca51ad7479c2b3460bc17ca0b966bb6a 33977702 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 687040 ERR3457727 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457727/ERR3457727.fastq.gz 8d08402ed2f9848c4d3c4507e8cc1e38 33188197 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 765729 ERR3457728 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457728/ERR3457728.fastq.gz 134baca4d4f79bebad224d8033dcd464 36382554 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN011.A0101 ENA PRJEB29990 ERS3607416 STN011.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 730179 ERR3457729 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457729/ERR3457729.fastq.gz 3147ca3175695b3ff28e0f9e66f20843 35140567 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 574992 ERR3457670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457670/ERR3457670.fastq.gz 7d33ca8dea772de6bdcf21b259865218 27925169 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 558785 ERR3457671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457671/ERR3457671.fastq.gz d6837999e242921dd78fbfebdb30dc45 27124549 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 632911 ERR3457672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457672/ERR3457672.fastq.gz 977640296a02c03baa586926689de08f 29984263 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 603962 ERR3457673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457673/ERR3457673.fastq.gz 4f35f7ca325adf4de9930f3eb3e3cd07 28728146 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 653089 ERR3457674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457674/ERR3457674.fastq.gz 41b4868644012cfb3d578ec0ef570c08 29630820 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 642499 ERR3457675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457675/ERR3457675.fastq.gz 3b94f9cb0e81430761d895ff6dedb8bd 29135378 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 640914 ERR3457676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457676/ERR3457676.fastq.gz 7d324b40b468ba8568fafb77d3ddf4b6 29907961 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 634207 ERR3457677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457677/ERR3457677.fastq.gz c8176e3c2d0ffdfa2f20e158f974a025 29546842 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 540006 ERR3457678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457678/ERR3457678.fastq.gz f0ef5b28960f1e1d58773331819ba599 26418191 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 526548 ERR3457679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457679/ERR3457679.fastq.gz 882268e26df1555609dee6c3c4a45f43 25767222 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 591056 ERR3457680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457680/ERR3457680.fastq.gz cffed17f9c00c23f8f06676aeab6cff6 28486477 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN004.A0101 ENA PRJEB29990 ERS3607412 STN004.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 561619 ERR3457681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457681/ERR3457681.fastq.gz 758282c62a416ab45291709ced0d4b25 27429800 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 335690 ERR3457826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457826/ERR3457826.fastq.gz 39363ec6373ef6f70cce7d2382ffa324 16136242 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 327101 ERR3457827 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457827/ERR3457827.fastq.gz 6c1c6d73b9834451952d560dbb3e2628 15691420 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 364532 ERR3457828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457828/ERR3457828.fastq.gz 86e6c20aa6de733f258ffc23187073ad 17093451 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 351040 ERR3457829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457829/ERR3457829.fastq.gz aba8efbac87b7dd4b23aa451f0729980 16486132 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372790 ERR3457830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457830/ERR3457830.fastq.gz 0adcd22529e371204eb6e441d2b027e7 16742897 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 368062 ERR3457831 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457831/ERR3457831.fastq.gz c8df8a12104b95ced6a617c859403046 16511454 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 374480 ERR3457832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457832/ERR3457832.fastq.gz e5ecac5b4c3989f4c14a19c1754c750a 17353705 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 372939 ERR3457833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457833/ERR3457833.fastq.gz 3e76329e5a4c9b43e041460288a40be0 17231604 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 316566 ERR3457834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457834/ERR3457834.fastq.gz 936e8644fb76f1e9060f3f2e96d52800 15333470 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 310855 ERR3457835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457835/ERR3457835.fastq.gz 1b65668d40fe802822bdf889ed538b19 15037058 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 344642 ERR3457836 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457836/ERR3457836.fastq.gz 6fb5cb3d5c2f9f43ef3b9680419df843 16422348 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN032.A0101 ENA PRJEB29990 ERS3607425 STN032.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 330753 ERR3457837 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457837/ERR3457837.fastq.gz 33db1480cb1ce541649e8b3fc65e58cb 15948256 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 260915 ERR3457814 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457814/ERR3457814.fastq.gz 8ec933c7b25c4825f4baef89769dadad 12522978 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 254942 ERR3457815 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457815/ERR3457815.fastq.gz ce1d7433b9cb4bf253201a2b78a468a7 12202681 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 285269 ERR3457816 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457816/ERR3457816.fastq.gz ed3ef7fa43041c5984c68a0929da11b3 13382226 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 273144 ERR3457817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457817/ERR3457817.fastq.gz aee20704e93e6b4e9eece86f3efce7cc 12820332 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 293781 ERR3457818 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457818/ERR3457818.fastq.gz 74b19ae63de3ea2fd5ec3fd4f29bf6f6 13205705 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 289290 ERR3457819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457819/ERR3457819.fastq.gz d7c8385835b0724a7c10cb082648add9 12977265 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 297413 ERR3457820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457820/ERR3457820.fastq.gz bb963996de88c594efe9b882e749c49f 13773878 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 293194 ERR3457821 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457821/ERR3457821.fastq.gz 58ae23e57c8c909ab4d694d0fa5c43e4 13559838 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 247251 ERR3457822 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457822/ERR3457822.fastq.gz 093b46667e54f259413c7d9b25d4e36f 11922095 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 243833 ERR3457823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457823/ERR3457823.fastq.gz ee7394f0a80195a7b77406d3817a3fc5 11740149 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 270050 ERR3457824 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457824/ERR3457824.fastq.gz dce35a666497c9cfc52df6b44d258b53 12808436 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN031.A0101 ENA PRJEB29990 ERS3607424 STN031.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 259085 ERR3457825 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457825/ERR3457825.fastq.gz 37798d681e872d42877cf075ba61d8a1 12428481 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 300859 ERR3457682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457682/ERR3457682.fastq.gz 2362ca77d9a9ffc9b54ab2920095129b 14452520 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 292790 ERR3457683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457683/ERR3457683.fastq.gz 0a679bc28cae63fa46bea8da14eb08ff 14057520 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 325964 ERR3457684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457684/ERR3457684.fastq.gz a8ed34e1ae79eba3dc1401e647b08ecc 15313881 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 314435 ERR3457685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457685/ERR3457685.fastq.gz 4d0d7014ba39cf2ff279c005175c147f 14797828 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332625 ERR3457686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457686/ERR3457686.fastq.gz 01e6e75ed4bdcb8bb340614c70c4aef2 14959257 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 328783 ERR3457687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457687/ERR3457687.fastq.gz 91240d861eb171b8efa1c11745a985eb 14780303 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 335614 ERR3457688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457688/ERR3457688.fastq.gz af6d7e9894d0401908cc600ae7cfeab8 15577609 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 332543 ERR3457689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457689/ERR3457689.fastq.gz f60cc7f0069ec380f41dc5f9b044c0bc 15403163 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 284733 ERR3457690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457690/ERR3457690.fastq.gz bf3c3a1b9864bee3c06e2f7e88a5fe00 13764684 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 278928 ERR3457691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457691/ERR3457691.fastq.gz 628094d1df246582924cb138e9bff362 13491712 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 307653 ERR3457692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457692/ERR3457692.fastq.gz 054d5a288e513d6e59e59b960a36e548 14641575 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN005.A0101 ENA PRJEB29990 ERS3607413 STN005.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 296064 ERR3457693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457693/ERR3457693.fastq.gz 86f6f62f51e8c16c951ac2e1c23bfb97 14264198 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 453763 ERR3457766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457766/ERR3457766.fastq.gz 5c380b425df9ffa88e8f4c57b3e538e2 21714956 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 441861 ERR3457767 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457767/ERR3457767.fastq.gz b567375ba0d4a78c7f0e3ba0e6235e1a 21118359 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 490730 ERR3457768 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457768/ERR3457768.fastq.gz eb278a4293c67042e7094ccefd03a1e3 22953410 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 471801 ERR3457769 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457769/ERR3457769.fastq.gz 2f390ec93f8a8810955c3100bdcd0cd2 22079678 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 506432 ERR3457770 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457770/ERR3457770.fastq.gz fc317d98da30018ef4ece39e681d5459 22683712 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 495072 ERR3457771 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457771/ERR3457771.fastq.gz f0451e172a05fd3221e5128d1cc9d11b 22140292 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 508434 ERR3457772 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457772/ERR3457772.fastq.gz fa1eed9c5eb991db9701cfdd06ea12d5 23480149 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 502028 ERR3457773 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457773/ERR3457773.fastq.gz 04c07078d7a25a8fa6dc231b616e1bc6 23128376 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 428650 ERR3457774 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457774/ERR3457774.fastq.gz 5011be6fccde4a10b068d1cb61b7ef94 20651590 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 418255 ERR3457775 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457775/ERR3457775.fastq.gz 9852653cbcd131ceeb379004385582cd 20142817 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 465812 ERR3457776 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457776/ERR3457776.fastq.gz 6ee63621fb773a01cff96cba168e01df 22074528 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN018.A0101 ENA PRJEB29990 ERS3607420 STN018.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 444563 ERR3457777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457777/ERR3457777.fastq.gz d80b69acc9657b6d4430f023dbb21c52 21316884 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 460187 ERR3457730 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457730/ERR3457730.fastq.gz 08e0fc7982676572c98205312f30b6b9 22532028 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 448267 ERR3457731 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457731/ERR3457731.fastq.gz 7c63d38f3bfb43ca68b72ef3b84d9472 21910963 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 498273 ERR3457732 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457732/ERR3457732.fastq.gz bed8034100ebf5a843a3c580f964b228 23835910 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 481149 ERR3457733 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457733/ERR3457733.fastq.gz a883207cf80d2da3de6c651b50e73d6f 23049916 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 515079 ERR3457734 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/004/ERR3457734/ERR3457734.fastq.gz 86014b253def3dd3f5c546521fe1c89e 23602604 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 508546 ERR3457735 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/005/ERR3457735/ERR3457735.fastq.gz 9fc19e66eb20302f43ea8e1688f6161f 23267512 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 516578 ERR3457736 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/006/ERR3457736/ERR3457736.fastq.gz 2add7a5dddc07fc53e8af8617ad7c24d 24382261 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 512230 ERR3457737 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/007/ERR3457737/ERR3457737.fastq.gz 3abe50ba762ba6de296271ec87a6f994 24103290 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 434684 ERR3457738 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457738/ERR3457738.fastq.gz cfefef611e5b634304169379b77b5f6e 21442970 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 427474 ERR3457739 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457739/ERR3457739.fastq.gz 12940a6ce198e3fc66524195e81752e8 21056180 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 473398 ERR3457740 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457740/ERR3457740.fastq.gz 614d51ec5673ca403c4ebaf66650680e 22969691 +Spyrou2019 2019 10.1038/s41467-019-12154-0 STN012.A0101 ENA PRJEB29990 ERS3607417 STN012.A0101 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 455136 ERR3457741 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457741/ERR3457741.fastq.gz d7735be06a21aba3d7b1fa9ab06b3c59 22337698 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4947990 ERR3457838 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/008/ERR3457838/ERR3457838.fastq.gz d42e11d9d7441c0d338526e873e13bf0 168635970 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4955872 ERR3457839 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/009/ERR3457839/ERR3457839.fastq.gz 9c320908960b1cc5b990556d27d1160f 168298220 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1114649 ERR3457840 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/000/ERR3457840/ERR3457840.fastq.gz e368bb7f55af8ce8e095bc5b63eec64f 38988711 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5685939 ERR3457841 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/001/ERR3457841/ERR3457841.fastq.gz 539a0e0e0aa1b084e57dc8e9e020afb5 191642913 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5699114 ERR3457842 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/002/ERR3457842/ERR3457842.fastq.gz 750751d796d458295f99469606546532 191405341 +Spyrou2019 2019 10.1038/s41467-019-12154-0 TRP002.A0101/02 ENA PRJEB29990 ERS3607426 TRP002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1245862 ERR3457843 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR345/003/ERR3457843/ERR3457843.fastq.gz 3076aec03a7bc33edb107fe18d4e9d0d 42908237 +Devault2017 2017 10.7554/eLife.20983 Nod1 SRA PRJNA352376 SRS1779841 Nod1-1h-UDG double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 1500 PAIRED WGS 32230769 SRR4885940 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/000/SRR4885940/SRR4885940_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/000/SRR4885940/SRR4885940_2.fastq.gz 3d93b3fd502505a44a5366c3b548d2c0;b3e7625e7b246021caf4d57a65b9a7ac 1917046256;1907442841 +Devault2017 2017 10.7554/eLife.20983 Nod1 SRA PRJNA352376 SRS1779840 Nod1-1h-nonU double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 1500 PAIRED WGS 840160 SRR4885939 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/009/SRR4885939/SRR4885939_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/009/SRR4885939/SRR4885939_2.fastq.gz ba74e9ffcf638552d48343f77c2d7dea;cbfb6c22e233d52d552225ba3f3083cb 51602580;50923478 +Devault2017 2017 10.7554/eLife.20983 Nod2 SRA PRJNA352376 SRS1779846 Nod2_UDG double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 1500 PAIRED WGS 6483539 SRR4885944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/004/SRR4885944/SRR4885944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/004/SRR4885944/SRR4885944_2.fastq.gz b823f570011beb8dfd808e7abb426c20;1929bf1d8d978c63d6bdd4a092c628e1 399224179;403258015 +Devault2017 2017 10.7554/eLife.20983 Nod2 SRA PRJNA352376 SRS1779844 Nod2_nonU double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 1500 PAIRED WGS 728551 SRR4885943 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/003/SRR4885943/SRR4885943_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR488/003/SRR4885943/SRR4885943_2.fastq.gz 053e7a8ba50209f43f8686c3a633f9bc;4e412d1148aee81dfb25cbb0c49cec6a 45708355;46088875 +Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 4732059 SRR6233936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR623/006/SRR6233936/SRR6233936_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR623/006/SRR6233936/SRR6233936_2.fastq.gz e8cc2e92d207fb19e490d21aec0fd6d4;2dae917abe1b738048a4b75e82dbf116 483224989;469619656 +Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 34322764 SRR847036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847036/SRR847036_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847036/SRR847036_2.fastq.gz 2b08221844d21c51e5cbac343ed53b33;8a63d71e6e597856c7eb961d4dff727f 2230651734;2235547148 +Mendum2014 2014 10.1186/1471-2164-15-270 Sk14 ENA PRJNA200950 SRS418847 unspecified double Phusion Hot Start High-Fidelity DNA full-udg Illumina MiSeq PAIRED Targeted-Capture 2705832 SRR847064 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847064/SRR847064_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847064/SRR847064_2.fastq.gz b68a4d87046e8b2f71685d60f8cd525c;d2e7fa8b03fd204c77c0eef97dcb609f 272834435;271423932 +Schuenemann2013 2013 10.1126/science.1238286 3077 SRA PRJNA200950 SRS418834 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 6029646 SRR847038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847038/SRR847038_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847038/SRR847038_2.fastq.gz c7f4afe2ce16e0a5ed0914e3f87bf3fe;6febef9156f22a43e03a38fa57f61f0e 358983105;357900019 +Schuenemann2013 2013 10.1126/science.1238286 3077 SRA PRJNA200950 SRS418834 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 1248819 SRR847039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847039/SRR847039_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847039/SRR847039_2.fastq.gz a02b76b36e373e3ad75cd8756b642a51;9963f2312c4b5993afc5fe8909f3690b 127011694;121289887 +Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 6751711 SRR847050 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847050/SRR847050_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847050/SRR847050_2.fastq.gz 746573e0c9ea6891648b68ec6bc7cdd4;27f1ee15d57f7093f5476eefd7a4d6c4 745159863;732559016 +Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 3135120 SRR847051 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847051/SRR847051_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847051/SRR847051_2.fastq.gz bbade4f6a68c7443d9b6796ba5818f91;64276958d4c32282eed3feafff8a80cf 308505941;311503998 +Schuenemann2013 2013 10.1126/science.1238286 Jorgen_625 SRA PRJNA200950 SRS418854 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 15101591 SRR847052 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847052/SRR847052_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847052/SRR847052_2.fastq.gz aa344403a2d45f0f2efd0c16f6dd84ea;d98e6a7731d856ae65e9ae3dc32fe236 1955448250;2141400735 +Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS419262 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina HiSeq 2000 PAIRED Unknown 42303966 SRR847702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847702/SRR847702_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847702/SRR847702_2.fastq.gz 2c5b2ed84194b342a1717a79acc5c24c;3fef02d1130eca7b7da4de7d7f0b3f12 3536313137;3672101405 +Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418858 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 39915365 SRR847056 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847056/SRR847056_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847056/SRR847056_2.fastq.gz e6e40001a238667d03a757225438c8e3;90474cb8fcbfe35c08f2ff100eedec8d 2472497908;2598198443 +Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418858 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 475522 SRR847057 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847057/SRR847057_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847057/SRR847057_2.fastq.gz 4ca488a5dbd2d656e84f147cb9ffaf06;3efcc973b5194d04853e7cf048b1f7c8 51170667;52124042 +Schuenemann2013 2013 10.1126/science.1238286 Refshale_16 SRA PRJNA200950 SRS418859 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 156781 SRR847058 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847058/SRR847058_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847058/SRR847058_2.fastq.gz 265a9172d8e44f33c3b967f7bae1fe3b;20d54dc3538fdd1508a0036b3f673ec1 15944896;15484326 +Schuenemann2013 2013 10.1126/science.1238286 SK2 SRA PRJNA200950 SRS418843 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina HiSeq 2000 PAIRED Unknown 54243849 SRR847034 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847034/SRR847034_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847034/SRR847034_2.fastq.gz e01efceb030fda4914f05accb3b269c1;6803dda5c2bc13075ecbf0b5bd1e7472 3973365718;4085569371 +Schuenemann2013 2013 10.1126/science.1238286 SK8 SRA PRJNA200950 SRS418845 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 9898159 SRR847069 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847069/SRR847069_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847069/SRR847069_2.fastq.gz 346237b054109fcdc1c7933cfb456237;f41c1f7c32bcfbb1a7be18a1290e8eb2 638952868;663649548 +Schuenemann2013 2013 10.1126/science.1238286 SK8 SRA PRJNA200950 SRS418845 unspecified double Phusion Hot Start High-Fidelity DNA unknown Illumina MiSeq PAIRED Unknown 243431 SRR847070 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847070/SRR847070_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR847/SRR847070/SRR847070_2.fastq.gz d1bfda82096b4e463b85dd7c3faa8644;903899d009a584204024d90584c5b77f 24758187;24245805 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 158509921 ERR2112553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112553/ERR2112553_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112553/ERR2112553_2.fastq.gz 6a43ccac3bc9f0b3f4f68bc1af728ad2;2c6f9bad6f17039d003a9f22a10ab225 4721536987;5204650270 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 160074003 ERR2112554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112554/ERR2112554_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112554/ERR2112554_2.fastq.gz 6e5b53f0c27cc4fb842ff1f19177fad3;a5e0160fcb4b0fe8e5e6637f20225e97 4779315428;5036417534 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 161480280 ERR2112555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112555/ERR2112555_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112555/ERR2112555_2.fastq.gz 4b127200fb4ae76efa1b78956e614510;4a740135d88f6c372a2c9fcb42cde5c2 4789085254;5041070343 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 160633252 ERR2112556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112556/ERR2112556_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112556/ERR2112556_2.fastq.gz 788bc1dacc6f1f0d28e395f220347af5;1626be306c67f3d232fc6615de4eee97 4762450582;4951034593 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164273153 ERR2112557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112557/ERR2112557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112557/ERR2112557_2.fastq.gz 1adb60e4ddb754c8d4ede388ff407e9f;3c6951cbf08d4d42c5f8ecc9cad9b697 4806203917;5006147821 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164731231 ERR2112558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112558/ERR2112558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112558/ERR2112558_2.fastq.gz e6878955f80155cf2e1deb4c0dd81f02;383b725be9cd7ca80602747bb186b4e6 4800425824;4986729224 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164966026 ERR2112559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112559/ERR2112559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112559/ERR2112559_2.fastq.gz d8aa7d5b71f2d386bb4c57a5ee08d4bb;cbb28b0906af2808eec919278257f23a 4808191942;4980287102 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 163136299 ERR2112560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112560/ERR2112560_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112560/ERR2112560_2.fastq.gz 7e2276f7a32f152e14864436ed98f4ea;2dbce83007d88bcca85aaa155a39bb8d 4748817702;5037568653 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165156375 ERR2112561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112561/ERR2112561_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112561/ERR2112561_2.fastq.gz 2019dca04801b17bead6651b3c9808b5;e27a3690e6048f068d8f6a2c33607f06 4763628506;5013978383 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164650794 ERR2112562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112562/ERR2112562_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112562/ERR2112562_2.fastq.gz 992e6fec435b812ff36f1f7855442ff3;e6f8834ef56caebebf4ae2f7ab5b8b44 4788084473;5094567380 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164721106 ERR2112563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112563/ERR2112563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112563/ERR2112563_2.fastq.gz fa85a61cf62b9a42acda74a98c3f5df3;48094f522349854fbebaafced3876e68 4800164197;4997400031 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 166025787 ERR2112564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112564/ERR2112564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112564/ERR2112564_2.fastq.gz e776a3a475e3eee63e086257e8a02512;bb320b3e8266542645e8f77bb59d3c09 4820737999;5020130667 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164103159 ERR2112565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112565/ERR2112565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112565/ERR2112565_2.fastq.gz 324a8db6548abf52aa23920a98d84bf5;37659fecedda363d284252267e916cc3 4778503496;5018805843 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165644849 ERR2112566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112566/ERR2112566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112566/ERR2112566_2.fastq.gz 915381af249dc612dc7c37deafb26fff;280be74e57759d7b12dc96192a1bf308 4830457040;5068900566 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 164604834 ERR2112567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112567/ERR2112567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112567/ERR2112567_2.fastq.gz 53c40a90ae18a27f9c5d65fe2dd1e545;5795d9e4d24f233084709ac17741a09b 4851693358;5066759901 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED WGS 165528233 ERR2112568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112568/ERR2112568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112568/ERR2112568_2.fastq.gz 144acf0766a776abeabf77e16e7c4399;d9288097ae27597bb817e8afe64b9e63 4864119549;5075657317 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 372094536 ERR2112583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112583/ERR2112583.fastq.gz cc3f78fa18391db558edf8718cc0d032 12980680823 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5794527 ERR2112584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112584/ERR2112584.fastq.gz 243fb7252669fd8506f12672bfb7be99 192305264 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5802479 ERR2112585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112585/ERR2112585.fastq.gz 712647b96f01764cd137add9d6e05ad5 191903848 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 RK1001 ENA PRJEB19335 ERS1892069 RK1.001.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1256993 ERR2112586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112586/ERR2112586.fastq.gz 456940c48c1bf831fb6ad37c181e683d 42608192 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8144554 ERR2112579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112579/ERR2112579.fastq.gz 805aefa171f5f931fbe2b543c6fde5c2 279961652 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7177264 ERR2112580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112580/ERR2112580.fastq.gz 3bbb18b723711d01fee6e6c6ab5c5bfe 243429825 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7204521 ERR2112581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112581/ERR2112581.fastq.gz 9e8752500e61c0983393249c7f12c272 243578581 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 GEN72 ENA PRJEB19335 ERS1892068 GEN_72 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1578552 ERR2112582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112582/ERR2112582.fastq.gz 875e4f45d778887d0193a641e67944c5 54940438 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 501935486 ERR2112544 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112544/ERR2112544_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112544/ERR2112544_2.fastq.gz 2855e888c9952a3ac54c5ea432788498;db8210ab13a896579682f2ba98efa81e 17699922375;18605175825 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 344982990 ERR2112545 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112545/ERR2112545_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112545/ERR2112545_2.fastq.gz 1a23abc7240499da06b1b622656ca9fc;527debf32a5ee6bcd251fe6be5d51c99 13583750169;14910826161 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai1 ENA PRJEB19335 ERS1892064 ABI745 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 357799530 ERR2112546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112546/ERR2112546_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112546/ERR2112546_2.fastq.gz 90219ed959b1c1db1c2987bc42e7949e;43b39295b8468d381e1cba524d570d5e 13656425987;15202466103 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 KunilaII ENA PRJEB19335 ERS1892065 ABI843 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 120252973 ERR2112547 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112547/ERR2112547_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112547/ERR2112547_2.fastq.gz 35dbbd41d04e16797c422373f72740c8;aa505813d4e4b98e5ebaee364264eb9d 5893549111;7424869213 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 KunilaII ENA PRJEB19335 ERS1892065 ABI843 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED WGS 326822431 ERR2112548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112548/ERR2112548_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112548/ERR2112548_2.fastq.gz 9ecc8c56c17e3b8d23da57ae66069544;d16d7917277312702f4cac28cf961a82 13072972361;14740293890 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 318125040 ERR2112574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112574/ERR2112574.fastq.gz d29e8511b8c860889920240560f28963 11592228429 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320155752 ERR2112575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112575/ERR2112575.fastq.gz 1c3931ef9c7b3198fd89eed4c4af79aa 11523747356 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320577112 ERR2112576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112576/ERR2112576.fastq.gz c01e8e624b5e7e542a6a53060eda2963 11612997118 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 286756923 ERR2112577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112577/ERR2112577.fastq.gz 1b43fd6bdd9e0f372e0370426e502ae9 10175356811 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 1343UnTal85 ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 165092355 ERR2112578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112578/ERR2112578.fastq.gz a546c8d02e34ab7ba9bf9b9b70edc110 6042098938 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 60086789 ERR2112549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112549/ERR2112549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112549/ERR2112549_2.fastq.gz 73e9401de765e9b63fe1370747dd75ba;19b46ab79d451b77e49cb404fd5d8d0c 3392780292;3402358327 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 91041105 ERR2112550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112550/ERR2112550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112550/ERR2112550_2.fastq.gz 30f0220ef11e032446557140f86b9309;7387ffbd1b1eeab20ad9947911b40f6a 5140424969;5269817111 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 69843225 ERR2112551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112551/ERR2112551_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112551/ERR2112551_2.fastq.gz 53e71e1b8bf186492ea9fb82fa1a4ae2;b8209a119dcb2e3221b85d18536d2981 3934275355;3954595191 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED WGS 102092884 ERR2112552 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112552/ERR2112552_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112552/ERR2112552_2.fastq.gz 48bb523817b5d18abedabc1cf9d0d7fa;f4b0a983a75459cbbb3aede659f11e1b 5682086307;5838030860 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50735294 ERR2112569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112569/ERR2112569.fastq.gz 665a95de7619e2ef8c8cbe7e34188012 1810848448 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50329730 ERR2112570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112570/ERR2112570.fastq.gz 3b81d52c424c4850f8d2dc89999eb81d 1776169803 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 50167481 ERR2112571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112571/ERR2112571.fastq.gz 74b5a8159f69a45baa182f2d522f0eac 1776435603 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 61241463 ERR2112572 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112572/ERR2112572.fastq.gz 73620883117477e8fc1ab19aedf85495 2112670160 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 6Post ENA PRJEB19335 ERS1892066 ABI910 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 28754842 ERR2112573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112573/ERR2112573.fastq.gz 6c3a2221ce1a99a4720dfd88bc88b0c5 1035185109 +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 708541536 ERR6196168 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR619/008/ERR6196168/ERR6196168_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR619/008/ERR6196168/ERR6196168_2.fastq.gz 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PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 306366670 ERR6379063 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR637/003/ERR6379063/ERR6379063_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR637/003/ERR6379063/ERR6379063_2.fastq.gz bc50b7156460d85e4a0fa81209cb3106;861a61a42eb1d1cbfc22d65a3f2c2788 6536666076;6861879346 +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 305538770 ERR6394580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR639/000/ERR6394580/ERR6394580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR639/000/ERR6394580/ERR6394580_2.fastq.gz 23e97d9bfa76081650331e0db5669743;7de7d63cad46f7daa5ab271629be598a 6537395350;6853695120 +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 598197958 ERR6412219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR641/009/ERR6412219/ERR6412219.fastq.gz 5eccdb437be25188ae73713697200b81 24891897642 +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 598197958 ERR6447533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6447533/ERR6447533.fastq.gz b1b70500cebe312e0fb46acdc0216991 27931103130 +Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 ENA PRJEB42185 ERS6638365 unspecified double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 PAIRED WGS 15713148 ERR6449173 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6449173/ERR6449173_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR644/003/ERR6449173/ERR6449173_2.fastq.gz 78e84e49a49e5c6e721ee1dc07af3bdc;bc3d861c5c2e7d1a7ce8281c2f85d825 306809833;315963092 +Feldman2016 2016 10.1093/molbev/msw170 AE1175 ENA PRJEB14851 ERS1266114 AE1175_L2 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 56536550 ERR1546642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/002/ERR1546642/ERR1546642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/002/ERR1546642/ERR1546642_2.fastq.gz b58628ae236b11bac77059e16d00b371;1900f8577b51533aab80d796754aa519 4492575976;4402503242 +Feldman2016 2016 10.1093/molbev/msw170 AE1175 ENA PRJEB14851 ERS1266114 AE1175_L3 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 10816140 ERR1546643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/003/ERR1546643/ERR1546643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR154/003/ERR1546643/ERR1546643_2.fastq.gz 5b4f5f731b4b6bc98ff1bd26f555053e;af6c1930b518b5167baeaaeaf37ae88a 770141622;723655879 +Kerudin2019 2019 10.1016/j.jas.2019.105035 C21 ENA PRJEB35037 ERS3908875 Chichester21T double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 137177 ERR3611144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/004/ERR3611144/ERR3611144_2.fastq.gz e63286c52160b9638d711d27dd220e49;71c61b150027588a18655d616e3dad18;73187fc796c1b18846370e5ca8617ea2 8278819;2161397;2440703 +Kerudin2019 2019 10.1016/j.jas.2019.105035 C48 ENA PRJEB35037 ERS3908876 Chichester48T double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 131530 ERR3611145 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/005/ERR3611145/ERR3611145_2.fastq.gz 82da0f58c160d25d559416aca9983703;e727af3eeaf821bf850583c2e09f7f64;778f6488419b646bab6e96468a4c0b58 8924663;1282793;1383563 +Kerudin2019 2019 10.1016/j.jas.2019.105035 R5046 ENA PRJEB35037 ERS3908877 Raunds5046F double KAPA HiFi Uracil+ none Illumina HiSeq 4000 PAIRED Targeted-Capture 379967 ERR3611146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR361/006/ERR3611146/ERR3611146_2.fastq.gz f56a6319e1e8917ca7ea909cd1c9ddc0;d3d929c9cc49c9f18b5f8e1774d7a287;27a6af0cfde260b1f9a140108cc49671 23944067;3467167;3959680 +Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ001 ENA PRJEB37007 ERS4540520 GLZ001.A0101.YP2 double PfuTurbo DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12895859 ERR4093959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093959/ERR4093959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093959/ERR4093959_2.fastq.gz bc902e54760c4cfe0400bd13d3fa2e1e;d23402bcf68b269db110ab8a1785dc9b 484295284;501742347 +Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ001 ENA PRJEB37007 ERS4540520 GLZ001.A0102.YP2 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13693524 ERR4093960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093960/ERR4093960_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093960/ERR4093960_2.fastq.gz d6f8daa30d25bdcd628afa8b4fcec640;61e8a31852d8d2d90da72471be4d6184 505472902;552271657 +Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ002 ENA PRJEB37007 ERS4540521 GLZ001.A0101.YP2 double PfuTurbo DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12991164 ERR4093961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093961/ERR4093961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093961/ERR4093961_2.fastq.gz 807c6213c3781b560528590f7499d308;73193cd0d91122a922d568ca14946599 475366612;505331466 +Yu2020 2020 10.1016/j.cell.2020.04.037 GLZ002 ENA PRJEB37007 ERS4540521 GLZ001.A0102.YP2 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12340868 ERR4093962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093962/ERR4093962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093962/ERR4093962_2.fastq.gz 3a2b7ac47669f69dd02a1870a7f6dc1e;d5c4d3855c5eaebfe262dd7b74e57118 456223751;490811953 +DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278128 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 81552922 ERR3858142 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/002/ERR3858142/ERR3858142_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/002/ERR3858142/ERR3858142_2.fastq.gz 614e2b127dfe9a2faa50a459a7690226;470266570e9accfc4055ee986db60dca 4216623837;4258580020 +DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278129 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 97706805 ERR3858143 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/003/ERR3858143/ERR3858143_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/003/ERR3858143/ERR3858143_2.fastq.gz cc74ced2cb759ef6acb3774e18220eb1;8cb95351b9f49b474b8cb89585a1544a 4987214060;5530899781 +DeDios2020 2020 10.1016/j.meegid.2020.104209 Marat ENA PRJEB32319 ERS4278130 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 99614047 ERR3858144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/004/ERR3858144/ERR3858144_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR385/004/ERR3858144/ERR3858144_2.fastq.gz 78775be579ad9ff166e864b895736cb5;1a91930c2add78c4a0076bbe4d715e31 5049303131;5502651070 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150872.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 15956463 ERR1883928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883928/ERR1883928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883928/ERR1883928_2.fastq.gz 5d6d95bed802ff3a46295f032e35df47;adb0898be830555159a79e553cb4b08f 1391406808;1437292203 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 19353079 ERR1883929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883929/ERR1883929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883929/ERR1883929_2.fastq.gz 4b9811b6a2b134b139cd25a42971566a;3bbe6c9444237856e0fd8bf25a1a461a 1698695187;1765092754 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150872.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 16336144 ERR1883976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883976/ERR1883976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883976/ERR1883976_2.fastq.gz 96eebdccb0204a1677086f8dd258d2e0;e39ef137dfcece10c41388a1b4876c75 1161460735;1339350380 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12237291 ERR1883977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883977/ERR1883977_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883977/ERR1883977_2.fastq.gz a8f618be2def88cf8bfe3e18f1a038cd;8ca29d3f9b430372e032514289125b8b 901184997;1065492381 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 106756421 ERR1884147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884147/ERR1884147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884147/ERR1884147_2.fastq.gz 8b2c3b62df5c58d176a34a1e24de3c4e;3071ca2553f9e8ca0c498c3fc47629e3 4214581205;4667187792 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G34 ENA PRJEB19769 ERS1574242 KH150873.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 218089079 ERR1884148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884148/ERR1884148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884148/ERR1884148_2.fastq.gz 813412ce27b4893d417935b75ef9c2c3;5dc8d489fe888328bffd597dbc1b224f 8641499110;9514599588 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 9128738 ERR1883912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883912/ERR1883912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883912/ERR1883912_2.fastq.gz 739e7f82a153e282d087b12116de9a48;b496490c44ab84ae2d287ae98006f394 847958546;866196709 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 68163457 ERR1884135 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1884135/ERR1884135_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1884135/ERR1884135_2.fastq.gz ff87eda3180c297e40b567b6490bc54c;76956c0f81e9d3513413ca444c31f20a 2823525865;3156861162 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 136213207 ERR1884136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884136/ERR1884136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884136/ERR1884136_2.fastq.gz 075fbb46900f5e479065743cfb161b81;8671d373bd0d8d18232620d0d6a48ee8 5663969989;6314971511 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6028531 ERR1884178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884178/ERR1884178_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884178/ERR1884178_2.fastq.gz b23acd6a7ad31112da58075b87e0e2d9;c9394eecbb8e13892896772921ba0de4 233179675;248355800 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 5960528 ERR1884179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884179/ERR1884179_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884179/ERR1884179_2.fastq.gz 1785c9435dcf7eba7fb69da1956dfe18;3a56c09c29b23c4bc5523f4bbd0a4675 231381620;243390231 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G154 ENA PRJEB19769 ERS1574227 KH150891.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 5683294 ERR1884180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1884180/ERR1884180_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1884180/ERR1884180_2.fastq.gz bcaf73310234bde7c9aaff1ef2cae926;f824c3827da20f7e919c91404f76d537 218069724;227192331 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 unspecified double Unknown unknown unspecified PAIRED Unknown 19973979 ERR1880929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1880929/ERR1880929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1880929/ERR1880929_2.fastq.gz 8e9568614230d5b390aa502d891e9083;35370d7558f34d2d8dcecff3f89d7437 1522515708;1519501490 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 188308766 ERR1883819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883819/ERR1883819_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1883819/ERR1883819_2.fastq.gz 867d7a1325d50292994da66a088742a5;a81669caef66dc6deb6bbcd450f05dd9 13028657023;13351820743 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.nonUDG_BS double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Unknown 4945097 ERR1883895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883895/ERR1883895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883895/ERR1883895_2.fastq.gz 1d5892c5584dee05c99000a22c2bf084;776fc0e343c8d3e3d252d76a746c141b 396256213;422727991 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G404 / Jorgen_404 ENA PRJEB19769 ERS1574247 KH130040.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19071 ERR1884218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884218/ERR1884218_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884218/ERR1884218_2.fastq.gz c342a2dc4cae0fae137c89124f086a1b;2fec1be2f956d64dbf73dc3d25cb769b 1389910;1419957 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 unspecified double Unknown unknown unspecified PAIRED Unknown 26137591 ERR1880930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1880930/ERR1880930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1880930/ERR1880930_2.fastq.gz 70d0bcb41510b5ba56175820b554312e;06e54ca1347785f9c1aea130b11dbb9e 1982668550;1989284545 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 KH130041.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 201028427 ERR1883820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1883820/ERR1883820_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/000/ERR1883820/ERR1883820_2.fastq.gz 192dbb6190b837a9dbc03e6db14e94e0;74c74638457ce57ea5d5f217e56386d4 14297283682;14759359014 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G427 / Jorgen_427 ENA PRJEB19769 ERS1574249 KH130041.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19676320 ERR1884219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884219/ERR1884219_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/009/ERR1884219/ERR1884219_2.fastq.gz 4c2f594fcaf3508e4bd2457ac5e1e950;996d3e0200c36b2b3e069c7ba9eab61e 1607876319;1610890811 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 unspecified double Unknown unknown unspecified PAIRED Unknown 18366205 ERR1880932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1880932/ERR1880932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1880932/ERR1880932_2.fastq.gz c6c317dafe1dc452f6298a75bce46ea3;135f870f8fae1d713e2f7be38b312ea3 1414763027;1408657834 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 207897676 ERR1883823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1883823/ERR1883823_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1883823/ERR1883823_2.fastq.gz b9f24849f9ea9bacd5d77014a472ae1b;5c182268fbe13b866274d1f29fd5bb65 15629395866;15744483072 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.nonUDG_BS double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Unknown 4877187 ERR1883896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883896/ERR1883896_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883896/ERR1883896_2.fastq.gz bb7ca7b9a9bea7fb62baf9e311848d32;47ab78d630795c7edb41d8781c9c1c6b 396458398;423081042 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G507 / Jorgen_507 ENA PRJEB19769 ERS1574253 KH130043.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 29779785 ERR1884221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884221/ERR1884221_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884221/ERR1884221_2.fastq.gz 4749eedfd2efe9da8b2d7b67000cce79;c89addca1bc66fea2908c47f44bcc764 2431089041;2431019990 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G533 / Jorgen_533 ENA PRJEB19769 ERS1574254 KH130044.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 19209000 ERR1884222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884222/ERR1884222_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884222/ERR1884222_2.fastq.gz 4a2763028bcf4a143e0b6805e91bd239;73645e3f27a44b60ef5f31fbce7a4156 1574180084;1566147383 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G533 / Jorgen_533 ENA PRJEB19769 ERS1574254 KH130044.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 25037407 ERR1884223 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884223/ERR1884223_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884223/ERR1884223_2.fastq.gz 07e31f1fa58764501f769a569ae62fb6;49e564e9ff621f59a74ddd21dfbc6fbd 2081594527;2077535382 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 24917844 ERR1883826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883826/ERR1883826_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883826/ERR1883826_2.fastq.gz 8d1c1feb435bb6610656438d30614e0a;80d13cdd871b8eea1836000a88ca2854 2060801483;2069293608 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 161290594 ERR1883887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883887/ERR1883887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1883887/ERR1883887_2.fastq.gz cefb4e8451f0f558a86a75e6bb207929;bde7b5ddb9b67c6ac1b6f2c3182b0eba 12929466225;13153660678 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 161708892 ERR1883888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883888/ERR1883888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1883888/ERR1883888_2.fastq.gz 36bbf7ddbf7ce081f8b8215dee8141f6;ca1154ef3c156773e4b4d7eda7175386 12932806644;13166984877 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 49435838 ERR1884152 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884152/ERR1884152_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884152/ERR1884152_2.fastq.gz 4b43a299b9fef564f89b13ea4877a10d;e5590916d19bf64336c480ef5e14a773 1903180885;2138402666 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G722 / Jorgen_722 ENA PRJEB19769 ERS1574259 KH130049.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 23739238 ERR1884226 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884226/ERR1884226_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1884226/ERR1884226_2.fastq.gz 581a1af6ec2c824ebcecb56d3fab68fb;36649931640551c7e6052007d72e0a94 1937655686;1948633396 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G749 / Jorgen_749 ENA PRJEB19769 ERS1574262 KH130050.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 14490020 ERR1884227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884227/ERR1884227_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/007/ERR1884227/ERR1884227_2.fastq.gz 59740a8c38372ec663f55816758641ea;84155771ebbc5f20ddb0c1d93ca6e4e6 1198125511;1196304746 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G749 / Jorgen_749 ENA PRJEB19769 ERS1574262 KH130050.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 21662114 ERR1884228 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884228/ERR1884228_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/008/ERR1884228/ERR1884228_2.fastq.gz 8f0c5fb20cbf095a83bd8fcfac794983;8bce00c46395ec5a25c63e1dd0f94b5d 1785636184;1790316195 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 25500184 ERR1884131 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884131/ERR1884131_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1884131/ERR1884131_2.fastq.gz 824fece7391dcb2187ae7ecabe80b808;82d76eb5d695e46f68f8365b5a96d39c 953677912;1061495109 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 357836240 ERR1884132 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884132/ERR1884132_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1884132/ERR1884132_2.fastq.gz 4a91e0aed2b7c993072fa15fcd12a4e5;f3dd5151a71ef1efb5a5615ae6aaa20e 14639358758;16080965348 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1083 ENA PRJEB19769 ERS1574217 KH150895.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 12375126 ERR1883904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/004/ERR1883904/ERR1883904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/004/ERR1883904/ERR1883904_2.fastq.gz cd11cb3934e36d7715bf1205e53790ba;34aac3abf505fd8d0331f9365a5607ed 1150630675;1155692596 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150848.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 16671228 ERR1883905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883905/ERR1883905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/005/ERR1883905/ERR1883905_2.fastq.gz 2fedbabf3dcaa05c129e06c4b60b8125;5c91fde3bfd6aaadb0cca0d516ad7b62 1402816369;1523290925 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 8519292 ERR1883906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883906/ERR1883906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/006/ERR1883906/ERR1883906_2.fastq.gz 5e82872aff3637105db775f0cb0c5f3a;6daecf8aafbe349e4407300dab276327 729396729;770691315 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150848.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12940028 ERR1883961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1883961/ERR1883961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/001/ERR1883961/ERR1883961_2.fastq.gz afe91d8f899a119f2d8c9a78b36850a5;f8f55fbf48a524c70cf8b8431be81f15 961230745;1132265484 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.nonUDG.shotgun double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 14240491 ERR1883962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883962/ERR1883962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/002/ERR1883962/ERR1883962_2.fastq.gz 41ecb93081fdd703ef40457f59c376ad;05e7a98c008eb261df839ca4a8e6d5a0 1042505916;1224669288 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x G1149 ENA PRJEB19769 ERS1574219 KH150849.UDG.shotgun double AccuPrime Pfx DNA full-udg unspecified PAIRED WGS 349893053 ERR1884133 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884133/ERR1884133_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR188/003/ERR1884133/ERR1884133_2.fastq.gz c25c1a9c19019403df9e6398e1b81019;26091a70414f5642896fbea0972f4244 14200533602;15834686995 +Susat2020 2020 10.1038/s41598-020-71530-9 G488 ENA PRJEB36413 ERS4266556 H01541 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 8277430 ERR3841655 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/005/ERR3841655/ERR3841655.fastq.gz 5c73d5f3e6ecf8f912a03a4fcd0681e5 337604567 +Susat2020 2020 10.1038/s41598-020-71530-9 G488 ENA PRJEB36413 ERS4266556 H01541 double Unknown half-udg Illumina HiSeq 4000 PAIRED Unknown 766700478 ERR6474341 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/001/ERR6474341/ERR6474341_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/001/ERR6474341/ERR6474341_2.fastq.gz eba8dd218fd442a586e45ddc6cbd8924;b8a0672bede1ea533b6ac94cc7ba8f13 24995662009;26038898154 +Susat2020 2020 10.1038/s41598-020-71530-9 G701 ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 191158993 ERR3841646 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/006/ERR3841646/ERR3841646.fastq.gz ad40e5810f4cade26206881f064d781a 8028301308 +Susat2020 2020 10.1038/s41598-020-71530-9 G701 ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 7930905 ERR3841647 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/007/ERR3841647/ERR3841647.fastq.gz 59264a85b271b4cc44ece2e409ed6257 329376589 +Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_1 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 394894 ERR3822202 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/002/ERR3822202/ERR3822202_2.fastq.gz d6f139ee7bb118fae44bf822cb424813;3ef3bbd0ce2029e60f915f64b882c83f;037fe98fc821d3fca789f23523f821c6 36086023;8826858;10323374 +Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_3 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 432302 ERR3822203 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/003/ERR3822203/ERR3822203_2.fastq.gz de3995fdc0e82ad7b9de0361def550af;79d36aa87f1ebee638362b89a8cbcc57;a4e919662ae13966b851a5d2cf3fef53 25454816;29614712;37496481 +Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_4 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 1896153 ERR3822204 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/004/ERR3822204/ERR3822204_2.fastq.gz 302442072f58f8028c35e407e1586a89;9b44e537e9f06f596069928be7ec6073;ddd370a46ef0f114f2083735e28e97f9 152872824;41860055;48838840 +Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 655_6 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 32442 ERR3822205 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3822205/ERR3822205_2.fastq.gz a2f5330a5fdf34f4839138771be352f5;d7e19c8ec19aa76ac4757d9e6567fa7c;495e0e1c264d9fb29d7776a363fb5d03 2931136;3582851;4339313 +Dux2020 2020 10.1126/science.aba9411 BMM 655/1912 ENA PRJEB36265 ERS4249335 ANC_94 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 7661241 ERR3822206 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3822206/ERR3822206_2.fastq.gz cade19e30c801a80df3431ea0123715a;b018fcd0a6794334c88dba29dd690654;f766c9ff778c376727b080b124b9c788 197221857;405359229;414818025 +Dux2020 2020 10.1126/science.aba9411 MVi/Prague.CZE/60/1 ENA PRJEB36265 ERS4249362 6116 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 1503692 ERR3822207 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/007/ERR3822207/ERR3822207_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/007/ERR3822207/ERR3822207_2.fastq.gz 666303617304a0467005978789460be2;6585490bf1e14f6d90e648dcebd42cc0 100662306;189956384 +Dux2020 2020 10.1126/science.aba9411 Mvi/Prague.CZE/60/2 ENA PRJEB36265 ERS4249363 6114 double KAPA HiFi HotStart DNA none Illumina MiSeq PAIRED RNA-Seq 949126 ERR3822208 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/008/ERR3822208/ERR3822208_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/008/ERR3822208/ERR3822208_2.fastq.gz 593ea88baaa99756779dadda93f164c3;ad9b5e3bb0805d34127f8151cdbafc45 63731564;94273385 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 378168985 ERR2261878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261878/ERR2261878.fastq.gz 8a595befcb860739abc4b7abacc3a81e 13344714197 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 386386437 ERR2261879 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/009/ERR2261879/ERR2261879.fastq.gz e5cbd08ab9cbdc25a14631ea9618eaf7 13361152013 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 376404791 ERR2261880 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/000/ERR2261880/ERR2261880.fastq.gz 2784c30ffc811fad6e61f63bcf980e8c 13204214450 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12617610 ERR2261881 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/001/ERR2261881/ERR2261881.fastq.gz e7f2045b96e52cd91aff24d17331896e 423059420 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT5 ENA PRJEB24296 ERS2106903 RT5_UDGhalf double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4196604 ERR2261888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261888/ERR2261888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/008/ERR2261888/ERR2261888_2.fastq.gz 4c14d9432b946228aed2b5013fd25e9e;096eeb6b02a2aeba6cefc5593b18496f 141140319;148144699 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5245587 ERR2261882 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/002/ERR2261882/ERR2261882.fastq.gz c138318ba32464abd03137f4dee1336e 162819357 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5253815 ERR2261883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/003/ERR2261883/ERR2261883.fastq.gz 2fbd0f56627ba44ce38c8159d8925aed 162260406 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.A double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1134291 ERR2261884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/004/ERR2261884/ERR2261884.fastq.gz 0c438bd3662e7cd5d161976251f6df02 35311178 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4889307 ERR2261885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/005/ERR2261885/ERR2261885.fastq.gz f4ad4eb08b679530c3a13dc915b29145 150740043 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4900068 ERR2261886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/006/ERR2261886/ERR2261886.fastq.gz 99a794fd2336a48758c26b90612d2afb 150262135 +Spyrou2018 2018 10.1038/s41467-018-04550-9 RT6 ENA PRJEB24296 ERS2106904 RT6.B double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1072490 ERR2261887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR226/007/ERR2261887/ERR2261887.fastq.gz 2b3e08d76c185c782d2d78e3ec503e87 33208889 +Campos2021 2021 10.1371/journal.ppat.1009714 HERB_1937 SRA PRJNA668001 SRS7491184 AOLQ-173 double Unknown unknown Illumina HiSeq 4000 PAIRED WGS 110439588 SRR12792042 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR127/042/SRR12792042/SRR12792042_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR127/042/SRR12792042/SRR12792042_2.fastq.gz 2d00d882384be33b3c4cda09d0808667;2bc4e1a1f5bffb94a3b0bb17dc256e05 6573290863;7139385454 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2387769 ERR3654262 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654262/ERR3654262.fastq.gz 5c78be1530e5d9ead00f47721d9e5c65 89340499 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2526272 ERR3654263 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654263/ERR3654263.fastq.gz 4a284a8f93d075bbdf0eb953cda4c003 94569356 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7706782 ERR3654286 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654286/ERR3654286.fastq.gz 8a95793d6783f95402981e0e1b8ac9b5 337510005 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7588871 ERR3654287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654287/ERR3654287.fastq.gz 0d0329b8e323b0a0a0e5b858704dde74 327651923 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 8226443 ERR3654288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654288/ERR3654288.fastq.gz 761e4922ec24ab2bd00fae0dc426e505 355269380 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0201a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 7858211 ERR3654289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654289/ERR3654289.fastq.gz f8b2fb1c4402399de4cf3006b74600ba 340735038 +Key2020 2020 10.1038/s41559-020-1106-9 MUR009 ENA PRJEB35216 ERS3967963 MUR009.A0102.SE1.3_S0_L004 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 62610663 ERR3654305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654305/ERR3654305_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654305/ERR3654305_2.fastq.gz 6e13dbcec3375f0d7b76dfbbff355e90;57dc377692ad5c3dfa37ea3d3fb11d4d 1891886015;1993121077 +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2637801 ERR3654264 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654264/ERR3654264.fastq.gz bb4dddfef0e9d5ae646a2e033486cda0 99684828 +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2809254 ERR3654265 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654265/ERR3654265.fastq.gz a40027b12b1ac0be97424b4a42566f0c 106143384 +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102a_S0_L002 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 47461534 ERR3654298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654298/ERR3654298_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654298/ERR3654298_2.fastq.gz 617b6d7903dd502edfcc21d4568189aa;e3d8e53ddd067aaf0bfd67221accc042 1429236239;1500911169 +Key2020 2020 10.1038/s41559-020-1106-9 MUR019 ENA PRJEB35216 ERS3967964 MUR019.A0102.SE1.3_S0_L002 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2200287 ERR3654306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654306/ERR3654306_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654306/ERR3654306_2.fastq.gz 7f3fbad45aded7c9ecb7013c8ad62848;d4dfc6c23befd6e3fd3729cfc55f7679 68656349;71591175 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3.002.A01_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3247831 ERR3654250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654250/ERR3654250.fastq.gz cf33aae2cf4b5ca213e830e0e0d8a176 117879414 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3.002.A01_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3141221 ERR3654251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654251/ERR3654251.fastq.gz 909da4eabcec6f90a66ad3d6982684de 115050904 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3977803 ERR3654258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654258/ERR3654258.fastq.gz 83d66dcfec33b655775bb2ee2a77d78a 146558966 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4200243 ERR3654259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654259/ERR3654259.fastq.gz 171e75b00a4bc58a4b9f0bb770a7e93c 154859548 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 16805580 ERR3654278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654278/ERR3654278.fastq.gz 155578d55853947abb8799321fa62ffb 717878791 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 16490312 ERR3654279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654279/ERR3654279.fastq.gz 06e66515d95b449e661653e7a4dee9aa 694592347 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 17963293 ERR3654280 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654280/ERR3654280.fastq.gz fdf212e5b3fc71af87551388269bf8ec 756170070 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 17116555 ERR3654281 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654281/ERR3654281.fastq.gz 73e4e0d3a393bf30006f705a723e0c8b 724026654 +Key2020 2020 10.1038/s41559-020-1106-9 IV3002 ENA PRJEB35216 ERS3967967 IV3002.A0102.SE1.3_S0_L005 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2440723 ERR3654303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654303/ERR3654303_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654303/ERR3654303_2.fastq.gz 6f9e2840e1c25584c1fd3657b925fbb4;c4399ab1e38a6d1c21d2812faa891c35 73764923;75726950 +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0102.SE1.1 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 18429539 ERR3654241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654241/ERR3654241.fastq.gz 5ff95d033a438d85c62db2150f4b152c 697662355 +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0103.SE1.1 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 23251062 ERR3654242 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654242/ERR3654242.fastq.gz 49862fbff7b844cc9255de2afb726c37 886425894 +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0102.SE1.2 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 24370186 ERR3654243 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654243/ERR3654243.fastq.gz 3569d69c2bdba85ea72c132e2f89c3c2 919686378 +Key2020 2020 10.1038/s41559-020-1106-9 IKI003 ENA PRJEB35216 ERS3967961 IKI003.A0103.SE1.2 single AccuPrime Pfx DNA none NextSeq 500 SINGLE Targeted-Capture 26676966 ERR3654244 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654244/ERR3654244.fastq.gz b7164ed147d2197155a85dca18218bc7 1010781742 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2481198 ERR3654266 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654266/ERR3654266.fastq.gz e2bd8363c1200c42a23a54644a1674e0 93699904 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2634040 ERR3654267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654267/ERR3654267.fastq.gz 97d789d61fb587f7b7fa56d44aa28060 99484881 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12837820 ERR3654290 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654290/ERR3654290.fastq.gz cbb0ebb4a0dc92afd4876f13da354bfd 560834073 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12593713 ERR3654291 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654291/ERR3654291.fastq.gz b326640e6375c1d30e9cc9cf1589c373 541793749 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13663838 ERR3654292 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654292/ERR3654292.fastq.gz dd64576f6c3ca4287ce61a44a27413b4 588083912 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13033209 ERR3654293 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654293/ERR3654293.fastq.gz c4cf6f138bd528a513bb93c0e299780e 563883882 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 MX164.UDGa_S0_L002 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 54190116 ERR3654299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654299/ERR3654299_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654299/ERR3654299_2.fastq.gz 161e49fa5dc087bafc27dada5bd0b5a3;f621b3c20c59b00b86cba38ea0986e96 1630023583;1723519796 +Key2020 2020 10.1038/s41559-020-1106-9 OBP001 ENA PRJEB35216 ERS3967965 OBP001.A0102.SE1.4_S0_L008 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5136305 ERR3654307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654307/ERR3654307_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654307/ERR3654307_2.fastq.gz 5af3adf6853d8db15d7278ef6da81db0;b156938ae76f14527dd779a021dfddd0 156627145;161978419 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2736712 ERR3654268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654268/ERR3654268.fastq.gz ffc073114f9c30dc365d30c247077ce7 101599135 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2897746 ERR3654269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/009/ERR3654269/ERR3654269.fastq.gz ca6fffafe41317598d377f0c5d642866 107568169 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 11932924 ERR3654294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654294/ERR3654294.fastq.gz 9c789bf9104690bee287eeb3067bc94d 520448495 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 11758056 ERR3654295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654295/ERR3654295.fastq.gz eb33e459e60bc3d98bde746f8e99d35a 504781862 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12724508 ERR3654296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654296/ERR3654296.fastq.gz 5f221660240d592d97343e8af9e28182 546880994 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12169767 ERR3654297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654297/ERR3654297.fastq.gz f00e4896257ad5c5aaf461aee2516910 525329261 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 MX51.UDGa_S0_L002 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 66359268 ERR3654300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654300/ERR3654300_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654300/ERR3654300_2.fastq.gz 1ad824b1201ab5f354bb911fd760f10f;1f7bb9b64caaca2bb44ba7a5b2e3bd66 1985408540;2075062945 +Key2020 2020 10.1038/s41559-020-1106-9 SUA004 ENA PRJEB35216 ERS3967966 SUA004.A0102.SE1.4_S0_L003 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2375208 ERR3654308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654308/ERR3654308_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3654308/ERR3654308_2.fastq.gz a5b790291741b60f1ad2163996445f54;fdf7957d40030c2233cab90fede18e54 73624533;76087877 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3.001.B01_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3863980 ERR3654252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654252/ERR3654252.fastq.gz 2f69ccaf9e4cb1c626675318398147c7 140804260 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3.001.B01_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3810901 ERR3654253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654253/ERR3654253.fastq.gz 4b4fb97f0a0eb0c7862c8251e3ad4b63 139937959 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L005_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2166757 ERR3654260 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654260/ERR3654260.fastq.gz 5fa3e2eba672d5eec58eae414662d74a 80669560 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L006_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2298823 ERR3654261 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654261/ERR3654261.fastq.gz 348ee65c62ecf7a83ec2d7d4badab2b7 85623030 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L001_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12518596 ERR3654282 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654282/ERR3654282.fastq.gz b31a64064e19161308e3bac8e68100d0 544522231 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L002_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12236609 ERR3654283 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654283/ERR3654283.fastq.gz 891a01e97a82ba9b0c1fd9d6caf97c16 525425659 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L003_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 13355310 ERR3654284 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654284/ERR3654284.fastq.gz 4bc34f5d00f5b03d246e08230675a010 572826168 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102a_S0_L004_R1_001.fastq.gz double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 SINGLE Targeted-Capture 12621966 ERR3654285 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654285/ERR3654285.fastq.gz 94684021b735e849a19494759a1c8533 544678100 +Key2020 2020 10.1038/s41559-020-1106-9 MK3001 ENA PRJEB35216 ERS3967962 MK3001.B0102.SE1.3_S0_L007 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1538367 ERR3654304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654304/ERR3654304_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654304/ERR3654304_2.fastq.gz e846eac92b44deeacd49f5b4a4a9b1cc;3ef0c9584e2408d5c98f492c5ef6f0b8 46293528;47234429 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 969987 ERR3654254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654254/ERR3654254.fastq.gz d571859138d43639d12bc8b149023c4f 34471468 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1029805 ERR3654255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654255/ERR3654255.fastq.gz 0ce1d39a719c784677e4d72b22625e08 36598944 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L005_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 981911 ERR3654256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654256/ERR3654256.fastq.gz fb75f24d0b5c7f337e868ea6378a61c0 35038101 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L006_R1_001.fastq.gz double PfuTurbo DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1037298 ERR3654257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654257/ERR3654257.fastq.gz 02ca462a66b05d4c9db08f8b4a36b2a0 37054998 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2350513 ERR3654270 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/000/ERR3654270/ERR3654270.fastq.gz 310d2bc8554cea5ee7a14ee74441502e 99699732 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2271361 ERR3654271 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654271/ERR3654271.fastq.gz 1f687e3ed29b1fb77c89d59210f45dfe 94929617 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2517997 ERR3654272 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654272/ERR3654272.fastq.gz 474a5e22cb2c05dd12d3026d448eade9 105280732 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA49_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2360893 ERR3654273 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3654273/ERR3654273.fastq.gz 4864f306997de2f8d323ea784633fd77 98992089 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L001_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2504319 ERR3654274 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/004/ERR3654274/ERR3654274.fastq.gz da73b35b700e072dfee49cbfd221f753 105953247 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L002_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2405876 ERR3654275 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3654275/ERR3654275.fastq.gz da15335ebd8bca4c9967494b4fc5b728 100260779 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L003_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2678846 ERR3654276 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/006/ERR3654276/ERR3654276.fastq.gz 49b9263e33f427b1baaec9f480ec7fe1 111578854 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 GA50_S0_L004_R1_001.fastq.gz double PfuTurbo DNA full-udg NextSeq 500 SINGLE Targeted-Capture 2504571 ERR3654277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3654277/ERR3654277.fastq.gz 5934451fdccdbe16ab19bb74a057394e 104747125 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 ETR001.A0102.SE1.3_S0_L001 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1365088 ERR3654301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654301/ERR3654301_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/001/ERR3654301/ERR3654301_2.fastq.gz 80c049fdcae86e71ed022b87b42758a8;320b2c740a37a44467983425b2fbb0ff 41898785;44786335 +Key2020 2020 10.1038/s41559-020-1106-9 ETR001 ENA PRJEB35216 ERS3967960 ETR001.A0103.SE1.3_S0_L001 double PfuTurbo DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1346053 ERR3654302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654302/ERR3654302_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3654302/ERR3654302_2.fastq.gz d303a4004b275c119f5bcc44dee7423d;f7c9015cf80c951be4516bbf7e05cd94 41332061;44167071 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CA_13 SRA PRJNA660267 SRS7288481 SG_CA13 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1733 SRR12548764 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/064/SRR12548764/SRR12548764.fastq.gz 7f4f85daec8cba958984add20990c29f 49046 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CA_13 SRA PRJNA660267 SRS7288481 C_CA13 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 11142 SRR12548769 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/069/SRR12548769/SRR12548769.fastq.gz 555dc9015f7be759eef1d2a238414e04 268162 +BravoLopez2020 2020 10.1098/rstb.2019.0580 VE_42 SRA PRJNA660267 SRS7288482 SG_VE42 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1206 SRR12548759 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/059/SRR12548759/SRR12548759.fastq.gz 273fe331cb5b75cc387ec723db3acf1e 49643 +BravoLopez2020 2020 10.1098/rstb.2019.0580 VE_42 SRA PRJNA660267 SRS7288482 C_VE42 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 45178 SRR12548768 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/068/SRR12548768/SRR12548768.fastq.gz b2df4cc75cf2acc24b35c5f9b0090fe7 1136181 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417Q SRA PRJNA660267 SRS7288476 C_TO2417Q double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 99525 SRR12548771 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/071/SRR12548771/SRR12548771.fastq.gz 4b9dee85670e9ff5afe60a0985314491 2383008 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417Q SRA PRJNA660267 SRS7288476 SG_TO2417Q double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 18867 SRR12548776 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/076/SRR12548776/SRR12548776.fastq.gz 2cc50ab6048ec3940a96b25d89b3215f 594834 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_2417J SRA PRJNA660267 SRS7326368 WG_TO2417J double Phusion Hot Start High-Fidelity DNA none Illumina NovaSeq 6000 PAIRED WGS 307840 SRR12595381 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/081/SRR12595381/SRR12595381.fastq.gz 77052c58d16c1d805d0c88aee5a439e6 6632520 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_333O SRA PRJNA660267 SRS7288477 C_TO333O double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 169836 SRR12548770 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/070/SRR12548770/SRR12548770.fastq.gz 53afc4885d004c7fe146c234ef970b17 4168159 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TO_333O SRA PRJNA660267 SRS7288477 SG_TO333O double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 11031 SRR12548775 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/075/SRR12548775/SRR12548775.fastq.gz 24973c8025cc91be2029a47eaeb2377b 400874 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_01 SRA PRJNA660267 SRS7288484 SG_TLA1 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 3268 SRR12548757 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/057/SRR12548757/SRR12548757.fastq.gz 2389486ebea079bc398936fa2706467d 145756 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_01 SRA PRJNA660267 SRS7288484 C_TLA01 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 132008 SRR12548766 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/066/SRR12548766/SRR12548766.fastq.gz c75f924e55eeb64ce51e5d41c7f35558 3724453 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_22 SRA PRJNA660267 SRS7288483 SG_TLA22 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 1992 SRR12548758 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/058/SRR12548758/SRR12548758.fastq.gz e4a14a2d1f6c04c6f2b37b8b28196ab3 83705 +BravoLopez2020 2020 10.1098/rstb.2019.0580 TLA_22 SRA PRJNA660267 SRS7288483 C_TLA22 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 121722 SRR12548767 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/067/SRR12548767/SRR12548767.fastq.gz 296f7bcf7ffb035b07f3e823d59f6f53 2977363 +BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_194 SRA PRJNA660267 SRS7288487 C_HSJN194 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 45351 SRR12548762 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/062/SRR12548762/SRR12548762.fastq.gz c82179c84333e4103cdc5326b0495df3 956765 +BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_240 SRA PRJNA660267 SRS7288488 SG_HSJN240 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 4600 SRR12548754 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/054/SRR12548754/SRR12548754.fastq.gz 687e36b93e2f834c1d70257cc1a1c8d3 181748 +BravoLopez2020 2020 10.1098/rstb.2019.0580 HSJN_240 SRA PRJNA660267 SRS7288488 C_HSJN240 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 103263 SRR12548761 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/061/SRR12548761/SRR12548761.fastq.gz f53fa65e3b570b7e0a724e7ae13e508a 2356610 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_09 SRA PRJNA660267 SRS7288485 SG_CO09 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 6796 SRR12548756 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/056/SRR12548756/SRR12548756.fastq.gz 0245750a8186db6f6ef1db31e2dcbf6d 272034 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_09 SRA PRJNA660267 SRS7288485 C_CO09 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 66538 SRR12548765 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/065/SRR12548765/SRR12548765.fastq.gz 7972980a4d013f50b83f7063044c5ddc 1643191 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_20 SRA PRJNA660267 SRS7288486 SG_CO20 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 4344 SRR12548755 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/055/SRR12548755/SRR12548755.fastq.gz a1d780da916d3b676dbfaca1cca05611 185093 +BravoLopez2020 2020 10.1098/rstb.2019.0580 CO_20 SRA PRJNA660267 SRS7288486 C_CO20 double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 146240 SRR12548763 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/063/SRR12548763/SRR12548763.fastq.gz d1499e746c70bc35bcc070a1acff0d35 3429159 +BravoLopez2020 2020 10.1098/rstb.2019.0580 UAQG SRA PRJNA660267 SRS7288478 C_UAQG double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED Targeted-Capture 115193 SRR12548760 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/060/SRR12548760/SRR12548760.fastq.gz f2e36cffb6ee7bcd373af1573711864a 2541255 +BravoLopez2020 2020 10.1098/rstb.2019.0580 UAQG SRA PRJNA660267 SRS7288478 SG_UAQG double Phusion Hot Start High-Fidelity DNA none NextSeq 550 PAIRED WGS 2438 SRR12548774 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR125/074/SRR12548774/SRR12548774.fastq.gz 9a4128823490c58d9e8435ed3e5df800 92465 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037135 CA_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 41669177 ERR3649966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR364/006/ERR3649966/ERR3649966.fastq.gz b218a5be0e0f8db9ef4ec28dacca6e6a 2048775086 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037137 CM_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 36781114 ERR3649967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR364/007/ERR3649967/ERR3649967.fastq.gz eb362c601d68658a87d24f26167a3ac2 1697062939 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037139 POS_Depletion double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Depletion 47712546 ERR3650017 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/007/ERR3650017/ERR3650017.fastq.gz fa12b0d6e39c641c097479993d97c7a4 2508330571 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037136 CA_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 52310688 ERR3650065 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/005/ERR3650065/ERR3650065.fastq.gz e35b8be7f9b139352df60554231b07bb 2673416540 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037140 POS_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 32323796 ERR3650068 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/008/ERR3650068/ERR3650068.fastq.gz f0c5f7fa1f25c63afc34bf4599d8158e 1655522429 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037138 CM_Capture double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Targeted-Capture 32441831 ERR3650072 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/002/ERR3650072/ERR3650072.fastq.gz 08f44464136e4d207100bf79bb00561f 1476763733 +vanDorp2020 2020 10.1093/molbev/msz264 Ebro-1944 ENA PRJEB30878 ERS3037141 Lane8 double KAPA HiFi Uracil+ none Illumina HiSeq 2500 SINGLE Unknown 117644568 ERR3651363 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR365/003/ERR3651363/ERR3651363.fastq.gz f3dd55def0a2095fc3bd054342f619ba 7160677222 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Barcelona_3031 ENA PRJEB13664 ERS1124787 Barcelona3031 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 61845279 ERR1368878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_2.fastq.gz 095af025dc7f11f79502974aa75e7386;4130f9ec25f3df279f8142845961aadb 4422361795;4446780768 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 15287222 ERR1368865 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368865/ERR1368865_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368865/ERR1368865_2.fastq.gz 01eb7e0c3161b290ac79bff3f88e1cdf;f0399f2e91442bc2a8e0c7b635c8e7da 1269803589;1322002881 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 16039857 ERR1368866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368866/ERR1368866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368866/ERR1368866_2.fastq.gz 7c30428ec6b7ae08a37d98c9daf29600;6a4c9efe374bd06f7979fa75b96f92e9 1282400944;1395894479 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 15359424 ERR1368867 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368867/ERR1368867_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368867/ERR1368867_2.fastq.gz c39f0745aed2a9e56be76dcf3ba357b8;d23b1595242f19a8d377edafd35b92e2 1315513057;1366208724 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Bolgar_2370 ENA PRJEB13664 ERS1124788 BolgarCity2370 double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 14958812 ERR1368868 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368868/ERR1368868_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368868/ERR1368868_2.fastq.gz d1d02beef7f4db6b728c15b7acf7cca4;449efd3969ea5f7c49982e53b4849dcf 1279475062;1315645140 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 2577213 ERR1368855 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368855/ERR1368855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368855/ERR1368855_2.fastq.gz 3d99cdfd67a2cffcce51c1fc9ed830cf;47ea1c20cf0988d2428a0fba79c9adb3 180699329;172739034 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 40401260 ERR1368856 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368856/ERR1368856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368856/ERR1368856_2.fastq.gz 8279c423d7739ec4bd269872bf05530f;56fef4dcd3093248442f30e3b4f11eab 2936591965;2787252850 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6035706 ERR1368857 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368857/ERR1368857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368857/ERR1368857_2.fastq.gz 941cd04f7c8c4f19680b297b2025355d;86a90f2f22e3b4c0677f2244e2d9cdf0 550999077;569936567 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6615495 ERR1368858 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368858/ERR1368858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368858/ERR1368858_2.fastq.gz 642eb8de6e7551445242cb5ecf8ebc59;9903975aa5e15f3fc88f253cacb62444 585618454;626625299 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 6063072 ERR1368859 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/009/ERR1368859/ERR1368859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/009/ERR1368859/ERR1368859_2.fastq.gz 6cfe1ad33a340941a3ea0d5c4ecbc9e9;36fd4ccc6e6a6d761d5b61ffcdf42b90 567174207;585137271 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5884724 ERR1368860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/000/ERR1368860/ERR1368860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/000/ERR1368860/ERR1368860_2.fastq.gz c236f23f9b246f6e01dea71005804c9c;dbf5febad1f975130aa321291c43c4c7 547322249;563272500 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2512583 ERR1368861 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/001/ERR1368861/ERR1368861_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/001/ERR1368861/ERR1368861_2.fastq.gz 294904f7a0b68f1dfdb06d5da945173b;f58fd1c59cae34ec061a6c474fa612bf 182016122;186879541 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2392454 ERR1368862 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/002/ERR1368862/ERR1368862_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/002/ERR1368862/ERR1368862_2.fastq.gz 2b4053da1b52cf505a3bd9bf18239651;c562236e6365c227854a2dc2c0d348a7 173945468;179367373 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124790 Ellwangen549_O_m double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2508490 ERR1368863 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368875/ERR1368875_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/005/ERR1368875/ERR1368875_2.fastq.gz 08615a879958d7fc420e48468f66b0b6;a1d2cd1732a50eaed5d6462f5b2877a7 606515266;644989323 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124789 Ellwangen549_O_c double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5866051 ERR1368876 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368876/ERR1368876_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/006/ERR1368876/ERR1368876_2.fastq.gz bd0160659d0029d9810c3a8fb5b1121f;119f0541e0b7069ff0e1394c607d4328 555194330;567409208 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ellwangen 549_O ENA PRJEB13664 ERS1124789 Ellwangen549_O_c double AmpliTaq Gold DNA full-udg NextSeq 500 PAIRED Targeted-Capture 5590066 ERR1368877 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368877/ERR1368877_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/007/ERR1368877/ERR1368877_2.fastq.gz 33e2ca3cc04ebc97b98badee8f85be23;1ad2443f2f5a563a9fe81b5bf1293260 525154131;535491385 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9a ENA PRJEB24501 ERS2591211 OSL9A double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 34833107 ERR2675600 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/000/ERR2675600/ERR2675600_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/000/ERR2675600/ERR2675600_2.fastq.gz 30bb75b452c2c0e34b4a8f6861ee2c35;ba7fdd14989b72cfb48d22831b17382e 1594286258;1618263206 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9a ENA PRJEB24501 ERS2591211 OSL9A double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 29574592 ERR2675601 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/001/ERR2675601/ERR2675601_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/001/ERR2675601/ERR2675601_2.fastq.gz 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DNA none Illumina HiSeq 2500 PAIRED WGS 168849562 ERR2675604 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/004/ERR2675604/ERR2675604_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/004/ERR2675604/ERR2675604_2.fastq.gz 223fb1c99c9727e21c88c5a54aec153e;4a44f9457cc3c9359127de3c55373d5a 7419502331;7651683139 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 70824586 ERR2675605 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/005/ERR2675605/ERR2675605_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/005/ERR2675605/ERR2675605_2.fastq.gz ec8cde6affe78f7a3ebd405ca3b57ec5;b3caaa1ed417d0e846bbbd09fe1b9111 3072082748;3161494661 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 39574100 ERR2675606 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/006/ERR2675606/ERR2675606_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/006/ERR2675606/ERR2675606_2.fastq.gz 71754101fe46a80539c27c9cacafae2d;1a1fbb2c7383ceb4a387917b5a76e52e 1444250169;1464773934 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 43054902 ERR2675607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/007/ERR2675607/ERR2675607_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/007/ERR2675607/ERR2675607_2.fastq.gz 00fb10d72d49dfffa23f167bce6325fc;0e95650db3c850058a7630a48fddbdb9 1563718100;1606441525 +Guellil2018 2018 10.1073/pnas.1807266115 OSL9b ENA PRJEB24501 ERS2591210 OSL9B double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 48742481 ERR2675608 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/008/ERR2675608/ERR2675608_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/008/ERR2675608/ERR2675608_2.fastq.gz 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10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 94445900 ERR1018890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018890/ERR1018890.fastq.gz 34824328973363c9fac8a087783f738b 3552996027 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 78959767 ERR1018891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018891/ERR1018891.fastq.gz 3929b75c73cbe9ca46498b65d3ddd604 2951996152 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 8534732 ERR1018892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018892/ERR1018892.fastq.gz e00e14d800aca75e74103a262649a21f 337970875 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 15118006 ERR1018893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018893/ERR1018893.fastq.gz f2268f2a722e69ba3b767f7b54d724fe 551317205 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 14686978 ERR1018894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1018894/ERR1018894.fastq.gz 18702ff1a644aab587e052fb896b5731 525012240 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 40294635 ERR1018895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1018895/ERR1018895.fastq.gz 157d9a68ef1b0f4821c0b7ea61e5cb17 1586328095 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 43406653 ERR1018896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1018896/ERR1018896.fastq.gz f953c3187c3ae8342bbec7c72521d0fd 1734718662 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 10899056 ERR1018897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018897/ERR1018897.fastq.gz a2a9c53eabd339744ba1bdfe273767ab 454757715 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 21397510 ERR1018898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018898/ERR1018898.fastq.gz b1851743b108190bcdcea9f27313b9b3 884238379 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 44860919 ERR1018899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018899/ERR1018899.fastq.gz 19fdf642109e7e1dbbe81bf666e16e48 1853858831 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 30611023 ERR1018900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018900/ERR1018900.fastq.gz ddf69e0333a4c03b8a37a9e79cd2adf3 1235792085 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 33156974 ERR1018901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018901/ERR1018901.fastq.gz 1fe9d26946232c0a9e9b7556eab18937 1346360248 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 32491613 ERR1018902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018902/ERR1018902.fastq.gz a16f97ba0f20009b9470806cfe72fce6 1339623907 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE00 ENA PRJEB10885 ERS848971 MA826_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 34436514 ERR1018903 fastq_all 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none Illumina HiSeq 2500 SINGLE WGS 21293817 ERR1018997 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018997/ERR1018997.fastq.gz 4ce25d3ecff99bc1c4f9dc7beeb0fa04 1016155565 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 1618196 ERR1018927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018927/ERR1018927.fastq.gz 5a7c8b9f00fee85fa0c8e6130c344a92 63481701 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 4694410 ERR1018928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018928/ERR1018928.fastq.gz b4b6e30fd9705c44005e5e1e284c853d 180859509 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE386 ENA PRJEB10885 ERS848973 MA626_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 3864446 ERR1018929 fastq_all 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none Illumina HiSeq 2500 SINGLE WGS 1767245 ERR1018957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018957/ERR1018957.fastq.gz 81c901ed3b34911de44e8cea4e607cf8 60146843 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 44914701 ERR1018958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018958/ERR1018958.fastq.gz 24d69e033bf2bf971222f9c0b4eceaca 1633333530 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 98525993 ERR1018959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018959/ERR1018959.fastq.gz 0a46c19312d69fa3a2914e51d41d6f27 3708884845 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE505 ENA PRJEB10885 ERS848975 MA873_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 104546093 ERR1018960 fastq_all 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none Illumina HiSeq 2500 SINGLE WGS 13734870 ERR1018967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018967/ERR1018967.fastq.gz cfde499929357b9e589c4063a2aa5340 492493995 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 15430275 ERR1018968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018968/ERR1018968.fastq.gz de6a35ae1aa0ccd69cc47b8ec31cc5f7 563739752 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 32407830 ERR1018969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018969/ERR1018969.fastq.gz 545512307384cd5d693ec21763d969c0 1216349210 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 35725254 ERR1018970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018970/ERR1018970.fastq.gz e599480b1cf38d3c65422b95f5ad7b32 1338903871 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 23586813 ERR1018971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018971/ERR1018971.fastq.gz b66ce9be43f84366d34eed1ebb794e7d 859980752 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 7521308 ERR1018972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018972/ERR1018972.fastq.gz 159a355462610093453c57ac939e38cc 277589089 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 38818593 ERR1018973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018973/ERR1018973.fastq.gz 6ccce5a3cb877598bd61436960d9c805 1471568442 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none Illumina HiSeq 2500 SINGLE WGS 75653683 ERR1018977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1018977/ERR1018977.fastq.gz 3ff320e2e5597b3bb161a3c5bafadd96 2613371191 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 163334070 ERR1018978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1018978/ERR1018978.fastq.gz a86a02b8f6df8f5903d378d32280400b 5833313097 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 168554803 ERR1018979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1018979/ERR1018979.fastq.gz 21e32629ee698683075c61b74d59847b 5997253947 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 110711217 ERR1018980 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1018980/ERR1018980.fastq.gz ec2e3fab2379f17e6d587149b16dbecb 4504984357 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 117455980 ERR1018981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1018981/ERR1018981.fastq.gz c1ccea70936b0363ca0ea72d6909fca3 4794110000 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 132287665 ERR1018982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1018982/ERR1018982.fastq.gz b8f8f3c9b94d5f80014b276b28b5a423 5363123512 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE509 ENA PRJEB10885 ERS848976 MA877_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 184262166 ERR1018983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1018983/ERR1018983.fastq.gz 77913696bb20aac5df7cfd929929c3d1 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Gold DNA none Illumina HiSeq 2500 SINGLE WGS 47990992 ERR1019000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/000/ERR1019000/ERR1019000.fastq.gz f55f6cdff8f332d87eaeb362feb20126 1795969272 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 59697605 ERR1019001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/001/ERR1019001/ERR1019001.fastq.gz 8802725195f09cb5cba6bbd16d3657f9 2161585633 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 86273724 ERR1019002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/002/ERR1019002/ERR1019002.fastq.gz 3bfbaf4b8f56dc5ad70e216ccf0ac93a 3458983288 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 54311189 ERR1019003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/003/ERR1019003/ERR1019003.fastq.gz c428750f1eab0d2db6ce9a497590db68 1982035964 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 147339017 ERR1019004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/004/ERR1019004/ERR1019004.fastq.gz 0a3fa9d0dbf63f44dd978d41ca771a57 5871559348 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L1 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 140186792 ERR1019005 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/005/ERR1019005/ERR1019005.fastq.gz 1f5713a68db83d6b9b700ccc126dec38 5172082468 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 70978646 ERR1019006 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/006/ERR1019006/ERR1019006.fastq.gz d9dabfe97d2cb82e28291ec4b23c514c 2659680744 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 80074109 ERR1019007 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/007/ERR1019007/ERR1019007.fastq.gz 4f600adb7999cb9406551db65d5a6cdd 3110655612 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 84439656 ERR1019008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/008/ERR1019008/ERR1019008.fastq.gz bd78265fdf4f1d5393fb3fed8cbafcdf 3290645904 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 RISE511 ENA PRJEB10885 ERS848977 MA879_L2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE WGS 95143470 ERR1019009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR101/009/ERR1019009/ERR1019009.fastq.gz 442170a6b77d89673bad613b4cb68ef8 3683570663 +Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 223805 ERR4093835 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093835/ERR4093835.fastq.gz 4fa2c1cc8cc1cb45f3a878fd4449288e 11148473 +Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap3 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 58365 ERR4093836 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093836/ERR4093836.fastq.gz 77d1aaaf939fd91f028a38000db59f8c 2422082 +Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 9097 ERR4093837 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093837/ERR4093837.fastq.gz fcc338ac3dfbdc009bf2755bde5592ec 420965 +Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 105936 ERR4093857 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093857/ERR4093857_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093857/ERR4093857_2.fastq.gz b92bd9da7f848fad49d5c3d6463cafb0;7afe69e6a3d3ac15a9e0594f1a337baa 5503971;6061032 +Muhlemann2020 2020 10.1126/science.aaw8977 VK382 SRA PRJEB38129 ERS4540432 CGG2_VK382_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 5890 ERR4093858 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093858/ERR4093858_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093858/ERR4093858_2.fastq.gz e9ea1fbfda0462634497f94b388bb3ae;e6b8f0daf0c18262c59feca529acfd3a 299417;336758 +Muhlemann2020 2020 10.1126/science.aaw8977 VK388 SRA PRJEB38129 ERS4540433 CGG2_VK388_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 195081 ERR4093838 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093838/ERR4093838.fastq.gz 486ec6c27b6c6bb40d86ede6bec2dfe1 7935039 +Muhlemann2020 2020 10.1126/science.aaw8977 VK388 SRA PRJEB38129 ERS4540433 CGG2_VK388_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 234793 ERR4093839 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093839/ERR4093839.fastq.gz a7e4c05e08cfcf53a43a85894df06141 8879503 +Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 309988 ERR4093842 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093842/ERR4093842.fastq.gz 54418ec5b53d7feb8fe2dc1ad8866f62 12670057 +Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 107396 ERR4093843 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093843/ERR4093843.fastq.gz e1b8763abff779eaea1fc84fdc780c4d 4461622 +Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 3032 ERR4093844 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093844/ERR4093844.fastq.gz ffc884870b2301291b6b061edf0c88f3 137695 +Muhlemann2020 2020 10.1126/science.aaw8977 VK470 SRA PRJEB38129 ERS4540435 CGG2_VK470_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 10772 ERR4093859 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093859/ERR4093859_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093859/ERR4093859_2.fastq.gz cdddfd7e64bae0323bc50b4dd8d09f90;6d5a783decccce952e1a69dc422ddb03 558534;639336 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 27588 ERR4093831 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093831/ERR4093831.fastq.gz ce51d6cdfcaf3380772e3e533caf3297 1037747 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 524928 ERR4093832 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093832/ERR4093832.fastq.gz 42917f50bd4533ceebc77e069a43183b 21724766 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap3 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 32854 ERR4093833 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093833/ERR4093833.fastq.gz 28d76681c46ffb76bbcee41ace6879ba 1320643 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 221962 ERR4093834 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093834/ERR4093834.fastq.gz 2153f85e08f2e2adc15404512776fa23 9991882 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 43894 ERR4093855 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093855/ERR4093855_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093855/ERR4093855_2.fastq.gz b8a7fd515a6d9797a36fd86700ad7451;66497e925c43036c453dc5d63dc6e49f 2262699;2547993 +Muhlemann2020 2020 10.1126/science.aaw8977 VK281 SRA PRJEB38129 ERS4540431 CGG2_VK281_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 1721 ERR4093856 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093856/ERR4093856_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093856/ERR4093856_2.fastq.gz 7b27cf12de34efb7a356ba18ad3ee906;aad6089e2174305e950f4b377f5053cf 88947;102595 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 191331 ERR4093824 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093824/ERR4093824.fastq.gz 9d43574785b09660a5dae17238111c45 6737023 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 978013 ERR4093825 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093825/ERR4093825.fastq.gz 6b95b1e5ab266d1ecd24f2695507cb93 34885142 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap3 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 60070 ERR4093826 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093826/ERR4093826.fastq.gz 9f840d2b3684663cacbab609da52de9b 2212045 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 162402 ERR4093827 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093827/ERR4093827.fastq.gz 947a6b3890368b4e4f1112be7225444a 6477384 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 85156 ERR4093852 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093852/ERR4093852_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093852/ERR4093852_2.fastq.gz bb7af9ae86ec1575d989429643660c5e;d26458b39f5f101515fe5f820200143f 4246723;4692260 +Muhlemann2020 2020 10.1126/science.aaw8977 VK168 SRA PRJEB38129 ERS4540429 CGG2_VK168_cap3 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 4030 ERR4093853 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093853/ERR4093853_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093853/ERR4093853_2.fastq.gz 3486682132895becebe436b60d7eaf53;92a056611c9d87c016a881b52d3ff30c 201195;219552 +Muhlemann2020 2020 10.1126/science.aaw8977 VK533 SRA PRJEB38129 ERS4540437 CGG2_VK533_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 8904 ERR4093848 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093848/ERR4093848.fastq.gz f04528d69f39aaf043596bedee69437b 334390 +Muhlemann2020 2020 10.1126/science.aaw8977 VK533 SRA PRJEB38129 ERS4540437 CGG2_VK533_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 365886 ERR4093849 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093849/ERR4093849.fastq.gz fc65666e52fa296ffb84a5608db1df50 18097310 +Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 114012 ERR4093845 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093845/ERR4093845.fastq.gz 9fb8cea7e27e30a3a0175b45c66938a3 4139547 +Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 127617 ERR4093846 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093846/ERR4093846.fastq.gz 5b68adc1f2eb97cd499dff28ed6022bf 5475277 +Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 56408 ERR4093847 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093847/ERR4093847.fastq.gz 1ea64356fa32ea67529997083acc1b57 2866443 +Muhlemann2020 2020 10.1126/science.aaw8977 VK515 SRA PRJEB38129 ERS4540436 CGG2_VK515_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 16929 ERR4093860 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093860/ERR4093860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093860/ERR4093860_2.fastq.gz d0cb4fe3cd995a18a6f113dfebf2995c;e6d2f6a5b7c2f350b843417a7b7e0530 856872;1004416 +Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 20884 ERR4093828 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093828/ERR4093828.fastq.gz eb38b7488645b89ee0cf3f6ba4e37a2f 691178 +Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 54739 ERR4093829 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093829/ERR4093829.fastq.gz 3d115dd6b207603a55afeff3d60c5a4f 1859336 +Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 15924 ERR4093830 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093830/ERR4093830.fastq.gz 1a807fbef18666a24d1a35d180617ec1 663508 +Muhlemann2020 2020 10.1126/science.aaw8977 VK255 SRA PRJEB38129 ERS4540430 CGG2_VK255_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 2993 ERR4093854 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093854/ERR4093854_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093854/ERR4093854_2.fastq.gz 14e071267a148122e9e4e04f2d965159;d57b604b0e69c13f4b13241650a39c17 154029;172247 +Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 16288 ERR4093808 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093808/ERR4093808.fastq.gz a0233f6cd04522c1519b6eb82bb192b2 593290 +Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 41244 ERR4093809 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093809/ERR4093809.fastq.gz 0b70c2c58c0c8f7d39735cc9582fd49b 1540356 +Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L2_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 47995 ERR4093810 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093810/ERR4093810.fastq.gz 02f17d6de96f052f5939a19a2c04662b 1784537 +Muhlemann2020 2020 10.1126/science.aaw8977 FIN1 SRA PRJEB38129 ERS4540426 CGG2_21429_E1_L3_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 35491 ERR4093811 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093811/ERR4093811.fastq.gz 9d45741fe6b73b3e166352dd754eae71 1300548 +Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 31178 ERR4093812 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093812/ERR4093812.fastq.gz 81acc07c449766f94899094b5bbbbff0 1077192 +Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_cap2 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 198129 ERR4093813 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093813/ERR4093813.fastq.gz 8fe4106bc0a420efa1630da1a85592ed 6964171 +Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 38421 ERR4093814 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/004/ERR4093814/ERR4093814.fastq.gz f39048ca0810a94c8ee9b0bccde5781a 1711943 +Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L2_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 85315 ERR4093815 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/005/ERR4093815/ERR4093815.fastq.gz 4a74fd663c9eb2bb93bb7e72ace55300 3835083 +Muhlemann2020 2020 10.1126/science.aaw8977 KHA1 SRA PRJEB38129 ERS4540425 CGG2_17793_E1_L3_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 68527 ERR4093816 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/006/ERR4093816/ERR4093816.fastq.gz 11504f3af61be4886ad7289bd33edd0c 3101735 +Muhlemann2020 2020 10.1126/science.aaw8977 VK443 SRA PRJEB38129 ERS4540434 CGG2_VK443_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 24884 ERR4093840 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093840/ERR4093840.fastq.gz 1d9edb9a08391bde75a46bfa71be2fbd 930166 +Muhlemann2020 2020 10.1126/science.aaw8977 VK443 SRA PRJEB38129 ERS4540434 CGG2_VK443_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 249761 ERR4093841 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093841/ERR4093841.fastq.gz d7def1bd408f0f2af3c303e1a9f19421 11023135 +Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 14552 ERR4093817 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/007/ERR4093817/ERR4093817.fastq.gz c67dfde2d53c9d60c2d0058893df96a7 510465 +Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 46686 ERR4093818 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/008/ERR4093818/ERR4093818.fastq.gz 316eded82ffefff341956acaba25ccd8 1750579 +Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap3 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 1041 ERR4093819 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/009/ERR4093819/ERR4093819.fastq.gz fac8c21aa0138d6c178c74146754564e 35943 +Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 662597 ERR4093820 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093820/ERR4093820.fastq.gz 2c3e313c1c8076372e8592a41d393e15 30818331 +Muhlemann2020 2020 10.1126/science.aaw8977 VK108 SRA PRJEB38129 ERS4540427 CGG2_VK108_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 3507 ERR4093850 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093850/ERR4093850_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/000/ERR4093850/ERR4093850_2.fastq.gz 3062b38ba028d1afb2a43bab68ba84e2;45457ec4dd42faf743e744b37084751c 177077;205065 +Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap1 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 41552 ERR4093821 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093821/ERR4093821.fastq.gz 528925cce0c68a1ffb884d9ac2ba0c8f 1271908 +Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap2 double Unknown none Illumina NovaSeq 6000 SINGLE Targeted-Capture 223139 ERR4093822 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/002/ERR4093822/ERR4093822.fastq.gz e1f901e2af5f32a0c64e06c2cb3484be 10002486 +Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_L1_sg double Unknown none Illumina HiSeq 2500 SINGLE WGS 140776 ERR4093823 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/003/ERR4093823/ERR4093823.fastq.gz d135bbd8d1fcdf199dbfa3014c01dc5e 5892798 +Muhlemann2020 2020 10.1126/science.aaw8977 VK138 SRA PRJEB38129 ERS4540428 CGG2_VK138_cap2 double Unknown none Illumina NovaSeq 6000 PAIRED Targeted-Capture 44041 ERR4093851 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093851/ERR4093851_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR409/001/ERR4093851/ERR4093851_2.fastq.gz cc7c0cc275811a4a9144ca8395d287bc;5202c1cfdb646b87675e574d4a964dde 2237231;2606288 +Williams2020 2020 10.1128/mra.00850-20 364459 SRA PRJNA643812 SRS6939171 L1 double Unknown unknown Illumina HiSeq 2000 PAIRED WGS 1605869 SRR12136712 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/012/SRR12136712/SRR12136712_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/012/SRR12136712/SRR12136712_2.fastq.gz 2976948a2f1a0400be2ee485bbd9c0b2;036b93564b68d7f66cf82632cb97dd1a 103759857;100622001 +Williams2020 2020 10.1128/mra.00850-20 AMNH98137_Q01 SRA PRJNA643812 SRS6939170 L2 double Unknown unknown NextSeq 500 PAIRED WGS 7410027 SRR12136713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/013/SRR12136713/SRR12136713_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR121/013/SRR12136713/SRR12136713_2.fastq.gz 1df07ef7fc45d838039e0aa2d9472004;d95165a823b6663360a7131abf2a420f 473558619;468736273 +DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369379 Ebro-1944-CA double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 200638 ERR3280963 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/003/ERR3280963/ERR3280963.fastq.gz 9d7c573ea33c6d90a8c604fdd26fb173 8837062 +DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369380 Ebro-1944-CM double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 7854 ERR3280964 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/004/ERR3280964/ERR3280964.fastq.gz 35c96b62c182f9a7896f7419b996e0d2 469190 +DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369382 Ebro-1944-POS double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 9006 ERR3280966 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/006/ERR3280966/ERR3280966.fastq.gz e2adbb2f5c11e77a5d04b1425eaf1a14 577071 +DeDios2019 2019 10.1099/mgen.0.000289 Ebro-1944 ENA PRJEB32165 ERS3369383 Ebro-1944-2017 double Unknown none Illumina HiSeq 4000 PAIRED Targeted-Capture 13467 ERR3280967 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR328/007/ERR3280967/ERR3280967_2.fastq.gz de0279894d6733cc14d7eab67ad638a3;c23fcdf3a1d285259ea8916a0bb0d1a9;f52e84d3f4267ca24d072f9ba950529e 502791;50519;49275 +Bos2016 2016 10.7554/eLife.12994.001 OBS107 ENA PRJEB12163 ERS1020860 OBS107_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 14646710 ERR1193532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_2.fastq.gz 884a4afc0b75b86bbb323f58b80a041c;9e5e2bca98fdf7b541b490f5955a9ad3 1149013961;1150891719 +Bos2016 2016 10.7554/eLife.12994.001 OBS107 ENA PRJEB12163 ERS1020860 OBS107 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 851096 ERR1193537 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/007/ERR1193537/ERR1193537.fastq.gz 864da17f8807ceecad7368caf2c92997 39236628 +Bos2016 2016 10.7554/eLife.12994.001 OBS110 ENA PRJEB12163 ERS1020861 OBS110_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 9879257 ERR1193533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/003/ERR1193533/ERR1193533_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/003/ERR1193533/ERR1193533_2.fastq.gz 0eaf58fa5c6a9587d2153ef649b1af9a;c0e6f849cdc6d2d70f09d385044a4eb2 798688570;806373020 +Bos2016 2016 10.7554/eLife.12994.001 OBS110 ENA PRJEB12163 ERS1020861 OBS110 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 855988 ERR1193538 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/008/ERR1193538/ERR1193538.fastq.gz 72d0f49993301a2aa8c70c2a721e1b05 45605618 +Bos2016 2016 10.7554/eLife.12994.001 OBS116 ENA PRJEB12163 ERS1020862 OBS116_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 16858273 ERR1193534 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/004/ERR1193534/ERR1193534_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/004/ERR1193534/ERR1193534_2.fastq.gz 72c5a770e1ee4c48b0df3d76f490bf5d;d853f82c01c64a11a592dd26412aadbc 1323117740;1330231355 +Bos2016 2016 10.7554/eLife.12994.001 OBS116 ENA PRJEB12163 ERS1020862 OBS116 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 1363415 ERR1193539 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/009/ERR1193539/ERR1193539.fastq.gz 5ef6cf8f4c6bebeb3f1bb4a5e6a07ac0 63050240 +Bos2016 2016 10.7554/eLife.12994.001 OBS124 ENA PRJEB12163 ERS1020863 OBS124_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 48797602 ERR1193535 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/005/ERR1193535/ERR1193535_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/005/ERR1193535/ERR1193535_2.fastq.gz c7d090ee0a81c21fb57662dca1623962;55be600622256d8a203f9320ad3d3a30 3899081493;3928448850 +Bos2016 2016 10.7554/eLife.12994.001 OBS124 ENA PRJEB12163 ERS1020863 OBS124 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 973763 ERR1193540 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/000/ERR1193540/ERR1193540.fastq.gz 276a966ba01b38ec442d40c748d9de2c 39933586 +Bos2016 2016 10.7554/eLife.12994.001 OBS137 ENA PRJEB12163 ERS1020864 OBS137_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 120018142 ERR1193536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/006/ERR1193536/ERR1193536_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/006/ERR1193536/ERR1193536_2.fastq.gz f801da036d33c973cae85611de7e8b68;1a61da048a646c95409e59082e6f0cb9 9510551390;9582886762 +Bos2016 2016 10.7554/eLife.12994.001 OBS137 ENA PRJEB12163 ERS1020864 OBS137 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 1583596 ERR1193541 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/001/ERR1193541/ERR1193541.fastq.gz 94f97aa57725c44b673eb077133a4086 63965851 +Duggan2016 2016 10.1016/j.cub.2016.10.061 VD21 SRA PRJNA348754 SRS1749354 RMP15SP double Unknown unknown Illumina HiSeq 1500 PAIRED Targeted-Capture 818264 SRR4427811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/001/SRR4427811/SRR4427811_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR442/001/SRR4427811/SRR4427811_2.fastq.gz a1866b517d35c8bb1d528f3e152861c1;0a30bdf0aad9614b753735539d2c346d 50785039;52375129 +Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071788 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 5841932 ERR4624258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624258/ERR4624258_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624258/ERR4624258_2.fastq.gz ff1e6359421c259b21ed8291b262d268;98fddb5a33349e96a5a781586808bafb 129774972;132798755 +Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071789 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 3558338 ERR4624259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624259/ERR4624259_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624259/ERR4624259_2.fastq.gz d2a69ea2fcd4a8845ba85023ac7eb343;d0f13c18b44970d5d5a85aad04f82098 79863649;80987691 +Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071790 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 4923840 ERR4624261 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624261/ERR4624261_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624261/ERR4624261_2.fastq.gz 35b5f97857d7d5ca55e6c954abbca44d;3a882a95de0dc93cffdbd1cf1645f9d7 110012416;112638641 +Morozova2020 2020 10.1098/rstb.2019.0569 Azov38 ENA PRJEB35426 ERS5071775 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 15041610 ERR4624266 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4624266/ERR4624266_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4624266/ERR4624266_2.fastq.gz d7e7035b5520c66f490b20cf8cb9faf8;2007db84495c3643a16ed172862e3c8a 272080624;295511568 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071791 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 2086014 ERR4624268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624268/ERR4624268_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4624268/ERR4624268_2.fastq.gz ba1b4012b31e525f26353af97f99cd9d;309e388e64db4f51b196bdadf8a1d856 55786646;56338804 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071792 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 116 ERR4624269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624269/ERR4624269_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4624269/ERR4624269_2.fastq.gz 2548ece59464a15f0da88d0f4f67c25e;8323ae381d83a1af91df7db260449c46 3629;3597 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071793 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 190957008 ERR4624301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624301/ERR4624301_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4624301/ERR4624301_2.fastq.gz 771ea60424e7ba65bf2104f6934bdc87;ce8913c8ef6dffe9de6690676e253a87 5294537948;5356064121 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071794 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 326695740 ERR4626656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626656/ERR4626656_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626656/ERR4626656_2.fastq.gz 562301c2d22c326f3fe1de990f738e44;c299af6c869c762c0475ce892736b46a 8990738217;9078418758 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdansk8 ENA PRJEB35426 ERS5071776 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 57731498 ERR4626666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626666/ERR4626666_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626666/ERR4626666_2.fastq.gz 3dd85ecbe4dcc2794fe3dbca19422670;dca314dccf66a80da4bc0c14f7c5b875 1182293366;1311413804 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071795 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 275176 ERR4624258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626667/ERR4626667_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626667/ERR4626667_2.fastq.gz b58bd981ad5d605285d0a2287752372e;6280646b1c1c55f6ad147ed358cd6eeb 6922113;6843248 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071796 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 234644 ERR4626668 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626668/ERR4626668_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626668/ERR4626668_2.fastq.gz e3883d6576ebd6634a63783bfbc5b06a;7413a0c77fcc93a8caa1fe71bae49cc1 5907155;6155756 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071797 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 387658 ERR4626669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626669/ERR4626669_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626669/ERR4626669_2.fastq.gz 1d713ec5ff3c907666ea7024a530a677;25716a5676e4a048348718237aef25aa 9975300;10051816 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071770 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED WGS 13800196 ERR4626670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/000/ERR4626670/ERR4626670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/000/ERR4626670/ERR4626670_2.fastq.gz 52629631defa6ebfc75c556549045a8a;77a4548a521a16b1fb47c944a7ba2d50 286073551;282439972 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071771 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED WGS 5080 ERR4626671 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4626671/ERR4626671_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/001/ERR4626671/ERR4626671_2.fastq.gz 43a30489f9f79527c8f47a7b4ce0a10c;307512595e3a82d23c4b8fe283d7fd2d 136826;131789 +Morozova2020 2020 10.1098/rstb.2019.0569 Rat ENA PRJEB35426 ERS5071777 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 15215118 ERR4626673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626673/ERR4626673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626673/ERR4626673_2.fastq.gz 03d66cf0bc5575358b6e814b6dc4489b;66c40cdfb3d0d8093ada788de4f478c1 277099035;301188374 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071778 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 415068 ERR4626674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626674/ERR4626674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626674/ERR4626674_2.fastq.gz 4faefdf2123a3feae30db76ab7fc9c8e;8d61c819d3cbbb35ba8b2546c718314d 10604096;10745016 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071779 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 751410 ERR4626675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626675/ERR4626675_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626675/ERR4626675_2.fastq.gz 50d72dc760c1cd1e0662eef395025f73;fd6098c1cd3aece62bbf3e1f4319bfb9 19580625;20001209 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071780 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 512610 ERR4626676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626676/ERR4626676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626676/ERR4626676_2.fastq.gz 79df5024197b7dda6882be3542c45426;038de2ff9ec7a39b02caba6643d81b56 13647880;13413784 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov1639 ENA PRJEB35426 ERS5071772 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 23346832 ERR4626677 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626677/ERR4626677_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626677/ERR4626677_2.fastq.gz db1b5b5925ac8607058a71915c226c5f;7dd118d8bf50e4bce8bc0e6662470e04 455913882;482702547 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071781 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 9460148 ERR4626678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626678/ERR4626678_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626678/ERR4626678_2.fastq.gz edcfb896f7bc0f7e8702531623108b77;f53e46b534775bf9aaf7019b4c44807b 235182688;238619998 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071782 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 12538458 ERR4626682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/002/ERR4626682/ERR4626682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/002/ERR4626682/ERR4626682_2.fastq.gz 0d6318ae235678c09ccb34ae0da9a567;4dbf7e912e360c3a287130a34457a113 311783578;323773354 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071783 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 17596204 ERR4626683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626683/ERR4626683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/003/ERR4626683/ERR4626683_2.fastq.gz 54b71b2ca3773e9986b7bf759f856fff;e84d5b1289d123684367e6f676dd94cd 432516959;442626640 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2033 ENA PRJEB35426 ERS5071773 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 19179342 ERR4626684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626684/ERR4626684_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/004/ERR4626684/ERR4626684_2.fastq.gz f3a49f2b52411fa5f34e5ff7116e8591;ce1c43e809bc2225f31d9af3cbdd42d9 373493102;402992251 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071784 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 106082 ERR4626685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626685/ERR4626685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/005/ERR4626685/ERR4626685_2.fastq.gz 38bfe6409e92fa9188e47ff1ccfc12a8;0f15a5d1a1cba1d78486dc5bbe7426c1 2999647;3017106 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071785 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 22 ERR4626686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626686/ERR4626686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/006/ERR4626686/ERR4626686_2.fastq.gz 435693804b2db5458478e01bccd5cc3c;060d4b7313dee349ffcc093ee0336843 753;794 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071786 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 1355606 ERR4626687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626687/ERR4626687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/007/ERR4626687/ERR4626687_2.fastq.gz 6da2681ca7f2d77781712d6c1e58977c;9c0358d255b654f27bd6e452592d645f 39072794;39961417 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071787 unspecified double Phusion Hot Start High-Fidelity DNA none NextSeq 500 PAIRED Targeted-Capture 414392 ERR4626688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626688/ERR4626688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/008/ERR4626688/ERR4626688_2.fastq.gz 07ebc3a84ee8a42008d203915acd4a70;322e275f793c6de89b47ffbc5208f622 10287005;10642703 +Morozova2020 2020 10.1098/rstb.2019.0569 Rostov2039 ENA PRJEB35426 ERS5071774 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 22190332 ERR4626689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626689/ERR4626689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR462/009/ERR4626689/ERR4626689_2.fastq.gz 550ed584bb1f831fba2f0183450e3b54;ce688b015d7a37e2a806b653ccc3581f 443883379;479843170 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177500 ENA PRJEB1877 ERS241528 KM177500_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 808055 ERR267866 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267866/ERR267866_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267866/ERR267866_2.fastq.gz 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KM177513_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 171642257 ERR267869 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267869/ERR267869_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267869/ERR267869_2.fastq.gz 5259f5e6267b5c0b9a2b699e89607574;ccc9ce3210dc10cc34163fc9a68d4359 14262675527;14742612947 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177497 ENA PRJEB1877 ERS788351 KM177497_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 876457 ERR957324 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR957/ERR957324/ERR957324_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR957/ERR957324/ERR957324_2.fastq.gz 3d0b706928970fa9551c41bfacde353d;26eff87debd365a48100825666899663 84601955;82686157 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177514 ENA PRJEB1877 ERS241530 KM177514_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 803023 ERR267870 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267870/ERR267870_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267870/ERR267870_2.fastq.gz 4f9c60836580f665e3fa8a3abbd1bfb0;b7ace074061cde3a0b83e00b036f059b 80669123;80654114 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177514 ENA PRJEB1877 ERS241530 KM177514_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 23433946 ERR267871 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267871/ERR267871_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267871/ERR267871_2.fastq.gz 7c48498a8b9e89a35305d64adfffcd03;38823eed1054d96a9007381b1ea69924 2031288095;2089457311 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177548 ENA PRJEB1877 ERS241531 KM177548_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 611320 ERR267872 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267872/ERR267872_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267872/ERR267872_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267876/ERR267876_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267876/ERR267876_2.fastq.gz 114beae576a9e285c8d8087c4953e5a5;32baccfe5c36c13696ad8f273a2ff72f 67260313;69092442 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177509 ENA PRJEB1877 ERS241533 KM177509_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 42517060 ERR267877 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267877/ERR267877_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267877/ERR267877_2.fastq.gz 330a9d713a215e4e20d6c34856a0623c;ebd1d4cbdb086a8cb7a3695ad0faa656 3744939337;3834941399 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182900 ENA PRJEB1877 ERS241534 M-0182900_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 1860984 ERR267878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267878/ERR267878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267878/ERR267878_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267882/ERR267882_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267882/ERR267882_2.fastq.gz e812f242fd7eb620538c2242405e5209;b04eea830063d30504acbf3c2dcb738c 99462934;99161011 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177517 ENA PRJEB1877 ERS241536 KM177517_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 33548302 ERR267883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267883/ERR267883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267883/ERR267883_2.fastq.gz 0153ee9c532b24f444738349fd8eaffd;75abaf76a54b4bbc74f96f50e720eaf2 2864093500;2946082146 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182897 ENA PRJEB1877 ERS241537 M-0182897_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 3775243 ERR267884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267884/ERR267884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267884/ERR267884_2.fastq.gz 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267889/ERR267889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267889/ERR267889_2.fastq.gz 244111d874b96f201f4d082276119ca6;b41e5e7198d1a5abe650fd263f70bf72 1765487907;1781092689 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGa unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 185927902 ERR267946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267946/ERR267946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267946/ERR267946_2.fastq.gz ece835101b328a3c8d790550b2cdf160;b384adfd0f31aa3545820153a893d28d 15379169897;15623528255 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGb unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 184471049 ERR267947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267947/ERR267947_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267947/ERR267947_2.fastq.gz b9d924fdc25fc5715e59dd91c024ac3f;0d02cd3360fae22f301606b635a0bed6 15266226256;15543023042 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182896 ENA PRJEB1877 ERS241539 M-0182896_UDGc unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 182797326 ERR267948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267948/ERR267948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267948/ERR267948_2.fastq.gz b3a087448a697d43ddbe8fa5cc091b0f;d12fdfee776624ccc40e2341209836c2 15103634727;15480348389 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182904 ENA PRJEB1877 ERS241540 M-0182904_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 2989143 ERR267890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267890/ERR267890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267890/ERR267890_2.fastq.gz 445fab75691303f0339cd01546da1c76;ec1900be1f117d7e477fdb6cbb1c9d8b 244968099;246589552 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182904 ENA PRJEB1877 ERS241540 M-0182904_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 26117949 ERR267891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267891/ERR267891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267891/ERR267891_2.fastq.gz 02876c018ad42d6fcee62367d4e525f1;e422b1fe00cfc01dc87cd8056b75eb36 2151438116;2185492455 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 PAIRED WGS 3668117 ERR267892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267892/ERR267892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267892/ERR267892_2.fastq.gz 8c08b49d625d69aff9eb54492becef15;a97b38e64e277814b261c3ab9c1fbb0a 305540236;307572765 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 25647566 ERR267893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267893/ERR267893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267893/ERR267893_2.fastq.gz df6725e111e1e5fdb8ac7622953bed38;118dc8dcf2460d29ac51e48d17465cda 2114515840;2127711956 +Yoshida2013 2013 10.7554/eLife.00731.002 M-0182903 ENA PRJEB1877 ERS241541 M-0182903_UDGa unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 230503850 ERR267949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267949/ERR267949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267949/ERR267949_2.fastq.gz e95ecc8d2925e391c916e78ac4ff9327;d48990914f66b8c2627a4d54129d7cfa 19533109582;19955351988 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177512 ENA PRJEB1877 ERS241542 KM177512_NO_UDG unknown Phusion Hot Start High-Fidelity DNA none Illumina MiSeq PAIRED WGS 605115 ERR267894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267894/ERR267894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267894/ERR267894_2.fastq.gz 334ce4cd0e46500cf0ce621be10e7c18;4acdc225b33876e58e44886dc45d5fcf 57351140;59812358 +Yoshida2013 2013 10.7554/eLife.00731.002 KM177512 ENA PRJEB1877 ERS241542 KM177512_UDG unknown Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 2000 PAIRED WGS 24302979 ERR267895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267895/ERR267895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR267/ERR267895/ERR267895_2.fastq.gz 7f72a897480e53c7de3ce4297c1a8699;09bc02561f049d3ff76c6bec061f850c 2086606314;2145135674 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 SINGLE WGS 26165442 ERR299534 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299534/ERR299534.fastq.gz 36bdb030d459bac95d975d7658c2f3aa 1836152202 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 171213802 ERR299535 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299535/ERR299535.fastq.gz 07cada140d3b162b2766c36fa2b952cf 11296524527 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 187350343 ERR299536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299536/ERR299536.fastq.gz d54d5d91a842184f0ee9585d515033b0 13140509343 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 184775365 ERR299537 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299537/ERR299537.fastq.gz 55c9c1cbbb3c079770d51952bbc151c3 12873399419 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CATAGA single Unknown none Illumina HiSeq 2000 SINGLE WGS 558444701 ERR299538 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299538/ERR299538.fastq.gz 26ed6d92f5f424cddf6d9f133b8b50b4 40756500194 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 119877253 ERR299565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299565/ERR299565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299565/ERR299565_2.fastq.gz 925482cbb9010b37da08473ce801678d;2a097e2e8effdf5c4c5255571cae92ac 9556153452;9560076900 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 113345623 ERR299566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299566/ERR299566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299566/ERR299566_2.fastq.gz fffeb341d12209a40f274d62e9f92583;7278f72d7cef3991c677e600e6a8ea2f 8566286907;6899802530 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 116158901 ERR299567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299567/ERR299567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299567/ERR299567_2.fastq.gz 1f3227c732acc0cd54693e4f94fbb554;2d8c7a7bfc0ab80e2075dce1e8ec2c5f 9310774839;9152409627 +Martin2013 2013 10.1038/ncomms3172 Pi1845A ENA PRJEB4015 ERS258003 Pi1845A_id_CGCTAT single Unknown none Illumina HiSeq 2000 PAIRED WGS 106937268 ERR299568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299568/ERR299568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299568/ERR299568_2.fastq.gz 2e66ad93ba6e668824d4043093eac81a;a213eb9a98eff6e619e7c28f86c61a4f 8614051515;8421486701 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 SINGLE WGS 13611041 ERR299539 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299539/ERR299539.fastq.gz ce2745894f466b3ec6e89c04e00f7d02 1006295094 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 15381433 ERR299540 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299540/ERR299540.fastq.gz fa45bbd9a1dccb34ae80b7709ab38b6f 975929860 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 16294978 ERR299541 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299541/ERR299541.fastq.gz e34c969e83d72adfd653ce848cc566bc 1101271812 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 16098387 ERR299542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299542/ERR299542.fastq.gz 85718168a6d2fd6583537c53885d1099 1080506435 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_TGAGCC single Unknown none Illumina HiSeq 2000 SINGLE WGS 47339095 ERR299543 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299543/ERR299543.fastq.gz 5ffa2bbc74ec4c32736fef619cdb703d 3335778828 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 81131710 ERR299569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299569/ERR299569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299569/ERR299569_2.fastq.gz 02c9519e646d78abe0a803556dc91d25;d75d9dc1ded92eff5305e38857d549f8 6756547236;6741206402 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 77372398 ERR299570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299570/ERR299570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299570/ERR299570_2.fastq.gz 5c161ed57cd3b5b3c032130fd13329eb;c4d65721941f2cab3fd3ebda56108853 6065297164;4842253998 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 78989199 ERR299571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299571/ERR299571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299571/ERR299571_2.fastq.gz d24ec11eb9b2493a5de5d67c0dfd19e8;db86580476788fb58b35ae3535a3cf82 6625841873;6468058758 +Martin2013 2013 10.1038/ncomms3172 Pi1845B ENA PRJEB4015 ERS258004 Pi1845B_id_CGTATA single Unknown none Illumina HiSeq 2000 PAIRED WGS 72414915 ERR299573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299573/ERR299573_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299573/ERR299573_2.fastq.gz ff1eaafb674662a455962c293004594e;d8674d8e2a8a4c5e41619d818f768ebb 6105566369;5927827574 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACTGCG double Unknown none Illumina HiSeq 2000 SINGLE WGS 16307416 ERR299544 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299544/ERR299544.fastq.gz e71fb8ca29ae790c8c86c67205673705 1207694792 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 SINGLE WGS 29706947 ERR299545 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299545/ERR299545.fastq.gz f62543176606b5bcafa4fb2eb4b91d01 2249333488 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 SINGLE WGS 33187624 ERR299546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299546/ERR299546.fastq.gz 27b83f9c1a9f423766c82289a5106f41 2581258227 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 SINGLE WGS 48234989 ERR299547 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299547/ERR299547.fastq.gz 5377aa6f0e485f1ad43a52d53609c98b 3817014009 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 SINGLE WGS 57085830 ERR299548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299548/ERR299548.fastq.gz c92fa12144bded932fab2351b4e43782 4628889798 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 PAIRED WGS 44360965 ERR299575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299575/ERR299575_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299575/ERR299575_2.fastq.gz fa86493c09d46339cba770391dcbc6eb;6acaae2ef85ed2b5a87209d60e2c29f6 3503502871;3532659991 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 PAIRED WGS 58557245 ERR299577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299577/ERR299577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299577/ERR299577_2.fastq.gz f9d42ace2fd63397cd247dc10e1cc2d9;117b5c7d4943cd56c6d039c919b4547d 4726147952;4776684573 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_ACAGTG double Unknown none Illumina HiSeq 2000 PAIRED WGS 58482478 ERR299579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299579/ERR299579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299579/ERR299579_2.fastq.gz 9950b1dd641a6010beced51a42bdcfa4;73c79b75925b853fca52c4c717646e9e 4969061730;4972031930 +Martin2013 2013 10.1038/ncomms3172 Pi1876 ENA PRJEB4015 ERS258005 Pi1876_id_GCCAAT double Unknown none Illumina HiSeq 2000 PAIRED WGS 76736270 ERR299581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299581/ERR299581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299581/ERR299581_2.fastq.gz 0f0d25ecaf2192489215d842b81e0993;ff3020600f8dbe3cba9720a5d90e555f 6634890243;6650995352 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_TCGATG double Unknown none Illumina HiSeq 2000 SINGLE WGS 11975234 ERR299549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299549/ERR299549.fastq.gz fac9ec78cd31556e48da024a81c284a4 877267211 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 SINGLE WGS 21785243 ERR299550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299550/ERR299550.fastq.gz 3498068a78c661fa5b0e9970abe660e2 1654948150 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 SINGLE WGS 27947413 ERR299551 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299551/ERR299551.fastq.gz 9282ae4424a1df4259528943f902a7d7 2129568576 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 SINGLE WGS 22494930 ERR299552 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299552/ERR299552.fastq.gz b7d0d175335a40389c9bc658ae47e470 1717875391 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 SINGLE WGS 36763033 ERR299553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299553/ERR299553.fastq.gz 731ccc614849af3aa7231fe97dc425f3 2925884259 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 SINGLE WGS 47242192 ERR299554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299554/ERR299554.fastq.gz b2958ccb335049ee27b4777c3aff8b31 3766596335 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 SINGLE WGS 36669518 ERR299555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299555/ERR299555.fastq.gz 9e28936d72c62ec43997d3ab326b7c11 2931129513 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 PAIRED WGS 59580343 ERR299583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299583/ERR299583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299583/ERR299583_2.fastq.gz 57d35ddab5d8db0306fcdcba6ce330d0;14e6f8638faff0f3669ebd4cb8f91f26 4779373550;4879673521 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 PAIRED WGS 76512368 ERR299585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299585/ERR299585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299585/ERR299585_2.fastq.gz a04f92fb58734f880065500bf69b5063;6a5cc2ff3ac8a7d89ec7d7252c0a68f2 6168004008;6301333164 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 PAIRED WGS 48396065 ERR299587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299587/ERR299587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299587/ERR299587_2.fastq.gz e8d3c3dbce52e2495efc7bd9fe3e26da;3eebd26ae7c3527eff219c5a74b439ee 3902844270;3979555699 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_CAGATC double Unknown none Illumina HiSeq 2000 PAIRED WGS 58939909 ERR299589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299589/ERR299589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299589/ERR299589_2.fastq.gz 4a8183c6db68d02c73b689795727494a;3991649f7474565408a915cb46f68d7a 5120450978;5157754965 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_ACTTGA double Unknown none Illumina HiSeq 2000 PAIRED WGS 73605867 ERR299591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299591/ERR299591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299591/ERR299591_2.fastq.gz fc734fbceb53f03f6e51ca745a0e3c6e;e7f5d70ae4686ddb673deb0f162be53d 6417275656;6463265989 +Martin2013 2013 10.1038/ncomms3172 Pi1882 ENA PRJEB4015 ERS258006 Pi1882_id_GATCAG double Unknown none Illumina HiSeq 2000 PAIRED WGS 43889574 ERR299593 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299593/ERR299593_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299593/ERR299593_2.fastq.gz b35b9bd7426372f0594bd418d6f9cb51;a51d770bfbc88c1534103e94e45a7b18 3821269072;3840508938 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 31878411 ERR299525 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299525/ERR299525.fastq.gz 6151db90c67e4d3773289d14322abc59 2422267698 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 25503170 ERR299526 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299526/ERR299526.fastq.gz f9120fb2c45625b292fed133884f3d0d 1946640872 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 23455560 ERR299527 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299527/ERR299527.fastq.gz d93cda08647ad2a32491220b713f2dc1 1741110643 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 52634762 ERR299528 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299528/ERR299528.fastq.gz 9ce5ffb471204977a8bdf5b8568b6c45 4166221829 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 44387509 ERR299529 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299529/ERR299529.fastq.gz 0423644c5fd38e5510902a89f49d8e04 3526789449 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 38194482 ERR299530 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299530/ERR299530.fastq.gz 68158c76dc5a1cda4a8924265de06053 2954222367 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none unspecified SINGLE WGS 62566817 ERR299531 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299531/ERR299531.fastq.gz 521ce988e22cb0bd11dd7edd0a8418ef 4915368500 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none unspecified SINGLE WGS 49363729 ERR299532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299532/ERR299532.fastq.gz 8702f1a399233cfd16b1d41fc550edac 3894970224 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none unspecified SINGLE WGS 45980711 ERR299533 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299533/ERR299533.fastq.gz a4610470fd25ee083b64271ff4726ffc 3531701287 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none Illumina HiSeq 2000 PAIRED WGS 94493411 ERR299559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299559/ERR299559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299559/ERR299559_2.fastq.gz a3f06f6e700aa3dff0c2ebf1dfe0b255;e3f92c572c74e722593e8692a9f0887b 7593375259;7850528903 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none Illumina HiSeq 2000 PAIRED WGS 74421224 ERR299560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299560/ERR299560_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299560/ERR299560_2.fastq.gz 9f1d90a48c3208c369c3d2f66e2c0810;9e1db267e4b86b2b58e5339a02e8fb18 6009572509;6214245318 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none Illumina HiSeq 2000 PAIRED WGS 63138115 ERR299561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299561/ERR299561_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299561/ERR299561_2.fastq.gz 92c6422ae5ba175f30cfb0cdef561c1b;bedec5e70435d88a778c1ed1d49f4e7e 4985135858;5146643364 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_TAGCTT double Unknown none Illumina HiSeq 2000 PAIRED WGS 71655448 ERR299562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299562/ERR299562_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299562/ERR299562_2.fastq.gz 22e12a5b28c0819928f85a69f3215b39;f64ee21a44f3f7640def7f9c2d1426aa 6225046072;6178935749 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_GGCTAC double Unknown none Illumina HiSeq 2000 PAIRED WGS 52195993 ERR299563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299563/ERR299563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299563/ERR299563_2.fastq.gz 3f58e515dc594c0bc44ea47219de8149;b66225770e13f59f1c919f2b0d2f4407 4554269692;4523420094 +Martin2013 2013 10.1038/ncomms3172 Pi1889 ENA PRJEB4015 ERS258007 Pi1889_id_CTTGTA double Unknown none Illumina HiSeq 2000 PAIRED WGS 48026604 ERR299564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299564/ERR299564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR299/ERR299564/ERR299564_2.fastq.gz eb35fc09381a22971351b8c481561e1c;5b1749be02e1ba32ba500fddd10059e0 4095522487;4049441181 +Fotakis2020 2020 10.1098/rstb.2019.0584 SK92 ENA PRJEB37995 ERS5113011 SK92_calculus double KAPA HiFi Uracil+ none BGISEQ-500 PAIRED WGS 337961062 ERR8050978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR805/008/ERR8050978/ERR8050978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR805/008/ERR8050978/ERR8050978_2.fastq.gz 8c10df2f77ac64f793ce8379a719d5e1;88e6a279e352143955b3e1b307709379 6899063594;6988901592 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 12048333 ERR2503176 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/006/ERR2503176/ERR2503176.fastq.gz 4e2432b43e5434ff1f545287ddba8394 515681762 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 43644594 ERR2503177 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/007/ERR2503177/ERR2503177.fastq.gz b5b493f9144451311b5d69447a5e8a6f 1417023412 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 11035770 ERR2503178 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/008/ERR2503178/ERR2503178.fastq.gz fcaa4f97ebe69300defadfb2890ec724 386725015 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 156347797 ERR2503180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/000/ERR2503180/ERR2503180.fastq.gz 7d005882c277a09574d6fcde6a1c40ca 6842169930 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 ENA PRJEB25891 ERS2367268 DA101_E1_L1 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 163912495 ERR2503182 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/002/ERR2503182/ERR2503182.fastq.gz 70cad2ec9e983129d6b58ed9642694af 7062039622 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 8607756 ERR2503179 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/009/ERR2503179/ERR2503179.fastq.gz 9b68b98d82e457a058e817dea8317277 343724760 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 67257702 ERR2503181 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/001/ERR2503181/ERR2503181.fastq.gz 9a5c40719b75c9ad846f428324bdea86 2770299480 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 ENA PRJEB25891 ERS2367269 DA147_E1_L2 double KAPA HiFi Uracil+ none Illumina HiSeq 4000 SINGLE WGS 72213653 ERR2503183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR250/003/ERR2503183/ERR2503183.fastq.gz 563e330190e310d0d062b044d02ba19c 2954704519 +Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473747 S5-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8978974 SRR957742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957742/SRR957742.fastq.gz b7c620b8ee165c08bee204529341ca5b 690614774 +Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473746 S6-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8999409 SRR957743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957743/SRR957743.fastq.gz 375e6b988eeb02cd56bdc861f4225b7f 703180372 +Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473748 S7-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 10187301 SRR957744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957744/SRR957744.fastq.gz c26d00cc0bf3b30de1ab4e6e199dcf0d 792532808 +Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473749 S8-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 10087890 SRR957745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957745/SRR957745.fastq.gz 1618b64b43195caa34c75dcf7b6c4c1c 791508690 +Warinner2014 2014 10.1038/ng.2906 G12 SRA PRJNA216965 SRS473750 S9-Shotgun-G12-calc double Phusion HS II DNA none Illumina HiSeq 2000 SINGLE WGS 8790145 SRR957746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR957/SRR957746/SRR957746.fastq.gz ed6eb0036191e98d4394d8588f79e0fd 599757007 +Devault2014 2014 10.1056/NEJMoa1308663 3090.13 SRA PRJNA219007 SRS480102 unspecified double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx SINGLE Targeted-Capture 172138676 SRR981225 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR981/SRR981225/SRR981225.fastq.gz 3a9de36529dc3379bd88503a76be5229 9095823939 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630b double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 1675402 ERR4374948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374948/ERR4374948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374948/ERR4374948_2.fastq.gz 926be06d766f617d530dd86c2c923a98;ef3b1912569503c4bec4393c467af101 107051806;105518845 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG1 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 22570691 ERR4375144 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4375144/ERR4375144.fastq.gz bc31466e2ba83f27902b3e517bf739b3 785130427 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG2 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 27168496 ERR4383828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/008/ERR4383828/ERR4383828.fastq.gz 41ea60645b38e218d841674673dbfb47 962482754 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1630 ENA PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 Abusir1630UDG3 double Phusion Hot Start High-Fidelity DNA full-udg Illumina HiSeq 4000 SINGLE WGS 25875319 ERR4383829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4383829/ERR4383829.fastq.gz cabe84183a942517ed31bd06f815d7f0 917944806 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 2920994 ERR4374011 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4374011/ERR4374011_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4374011/ERR4374011_2.fastq.gz e7ec3c7fb29e40d16710081d2feb8994;933b05c122f2c4899b7a0a470d7533fb 223979315;224820846 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_1 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 7498748 ERR4386594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/004/ERR4386594/ERR4386594_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/004/ERR4386594/ERR4386594_2.fastq.gz 4c1532173ff5167f5f11722a51266c7e;882cf017a4d2ecba66596d28f5b098a8 470376358;513240544 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 2094918 ERR4388102 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/002/ERR4388102/ERR4388102_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/002/ERR4388102/ERR4388102_2.fastq.gz b3a7f685a18bcc3e7ab40d0511400adc;7bb00d39f98a28f5a3fb619426a3696f 74381752;81080489 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_4 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 2043769 ERR4388107 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4388107/ERR4388107_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4388107/ERR4388107_2.fastq.gz 588ffe4bca41e2c72cca79959ca06ffd;266ffb4a7ce4c2d4f31343e7654ded18 73500339;86160084 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_2 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 68309897 ERR4388231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/001/ERR4388231/ERR4388231_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/001/ERR4388231/ERR4388231_2.fastq.gz acece4818ab416324da0cf63402b0a12;3c0efafafecda2de2e1ea5966546b5f5 2507959022;2979964842 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543s_deeper_sequencing_5 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 85981168 ERR4388236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/006/ERR4388236/ERR4388236_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/006/ERR4388236/ERR4388236_2.fastq.gz 66d091524a34f078c98572d36f533f02;0306df7f63723b81354b84658d7ca86b 3787231452;3997582586 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_1 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 1151423 ERR4384927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4384927/ERR4384927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/007/ERR4384927/ERR4384927_2.fastq.gz c74c1c0c0a2ed8599bd6d461a2b7c633;f94e0d0abbf5d0cdfa025950450ece20 75049432;86890431 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_2 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 3669179 ERR4385800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/000/ERR4385800/ERR4385800_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/000/ERR4385800/ERR4385800_2.fastq.gz 102a24929948a9c8a36fd97bc413a1db;ab3352a7943ac95861386137174be48b 232629449;265766157 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 12607106 ERR4385809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4385809/ERR4385809_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4385809/ERR4385809_2.fastq.gz 6f41a2eb226ae091f5423fdc98391b04;96d6ba2c095cba635fdfff04a5963bc3 794112413;899207544 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b_deeper_sequencing_4 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 72657115 ERR4386569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4386569/ERR4386569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR438/009/ERR4386569/ERR4386569_2.fastq.gz e7f72ba102c6ad019068109dc3cb6d19;b0ed5a76e625b70479a02af4e35a6042 2811157094;3327301183 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir1543 ENA PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 Abusir1543b double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 3702377 ERR4374008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374008/ERR4374008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/008/ERR4374008/ERR4374008_2.fastq.gz 6c48b43d0690b87dc343c185eb95d85a;38f5f85d17cb6dc960e3fb88f3856b11 302008916;300798534 +Philips2020 2020 10.1186/s12864-020-06810-9 PCA0088 SRA PRJNA354503 SRS1815293 PCA0088 double Phusion HS II DNA none Illumina Genome Analyzer II SINGLE WGS 5639903 SRR5047063 fastq_all ftp.sra.ebi.ac.uk/vol1/srr/SRR504/003/SRR5047063 5ffd013579caedf94ec5832b4c058d1c 365310448 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935826 P328 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 10336908 ERR4337434 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337434/ERR4337434_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337434/ERR4337434_2.fastq.gz 284efb8b6a46b76777a50e61c33f2b09;e71f2db328134c68a98ea10cbe4160b3 942776437;1028350019 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935827 P328a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 15102369 ERR4337440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/000/ERR4337440/ERR4337440_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/000/ERR4337440/ERR4337440_2.fastq.gz ddba178303dbe1ea489643a574fabd68;179fa2bfec48cf6ee1fcf97de7af9c22 534143849;621641602 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935828 P328b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 12174316 ERR4337442 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/002/ERR4337442/ERR4337442_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/002/ERR4337442/ERR4337442_2.fastq.gz 90771d01f54f5715d62b49125c8ee198;3b303b3695cb69a56cd40aaae99b8ce5 428229426;504951872 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935829 P328c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 9459770 ERR4337443 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/003/ERR4337443/ERR4337443_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/003/ERR4337443/ERR4337443_2.fastq.gz 0929ac9c8fd489eba1b922de6a19cbd6;52dd07fc7b9ccb24b994fe99793f6c96 366972580;377889092 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935830 P328d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 14049991 ERR4337444 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337444/ERR4337444_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/004/ERR4337444/ERR4337444_2.fastq.gz ad71f4ab53497aa43afc21b198d64d15;ca53c1a9c335a74ede9d7dbb73ddce0f 500766718;583720483 +Ferrari2020 2020 10.1098/rstb.2019.0572 RCSHC/P 328 ENA PRJEB35140 ERS3935831 P328e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 13671620 ERR4337445 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/005/ERR4337445/ERR4337445_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR433/005/ERR4337445/ERR4337445_2.fastq.gz ebf43f0511bd08a56ddc8f6b7032e0a7;c43f29a6f7b439b8b60ae85e7532052f 485649591;557461094 +Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563413 121-A1 double Unknown none Illumina MiSeq PAIRED WGS 14853214 ERR651008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651008/ERR651008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651008/ERR651008_2.fastq.gz b34177fcc234de9eb2fc98d45159afc6;22efd6b33c1f2be7989107dc285b3fc0 1627319356;1741320543 +Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563414 121-B1 double Unknown none Illumina MiSeq PAIRED WGS 1720137 ERR651009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651009/ERR651009_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651009/ERR651009_2.fastq.gz 4538c2ac9c0629e0abcaee7e5e4cf6df;4ee471a4d9ccb7b6eaa85a38993e565e 270608654;298713013 +Kay2015 2015 10.1038/ncomms7717 body_121 ENA PRJEB7454 ERS563415 121-B2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 31660130 ERR651010 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651010/ERR651010_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651010/ERR651010_2.fastq.gz 7f89a37f15e9e0ec8cc34beb8b0ea904;cde1c9f16b879ac0437fa457f32ad18d 4160674077;4392757994 +Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563404 68-A1 double Unknown none Illumina MiSeq PAIRED WGS 5541400 ERR650569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650569/ERR650569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650569/ERR650569_2.fastq.gz 3d28ba951756b70d3fa3758644306215;febf339634d83725ce766c800dc484ac 678090742;744766268 +Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563405 68-B1 double Unknown none Illumina MiSeq PAIRED WGS 19138733 ERR651000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651000/ERR651000_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651000/ERR651000_2.fastq.gz a26ec71998c25053926adb32c15b187d;ac67a0bf1801d5a0ddaa2eb5e979a3d0 3501230830;3683302755 +Kay2015 2015 10.1038/ncomms7717 body_68 ENA PRJEB7454 ERS563406 68-C1 double Unknown none Illumina MiSeq PAIRED WGS 1478638 ERR651001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651001/ERR651001_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651001/ERR651001_2.fastq.gz 2f2c0ebe0402631231438de0866b1221;1c5267474b9e7075a3f1f79b16fab4ff 239084220;259841480 +Kay2015 2015 10.1038/ncomms7717 body_78 ENA PRJEB7454 ERS563407 78-A1 double Unknown none Illumina MiSeq PAIRED WGS 17448828 ERR651002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651002/ERR651002_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651002/ERR651002_2.fastq.gz ab32428aa0643f9b75294d8587b33e6a;a6b0d2b10aeb163d45791cdb7092342c 2414784347;3066864451 +Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563385 28-A1 double Unknown none Illumina MiSeq PAIRED WGS 22262125 ERR650981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650981/ERR650981_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650981/ERR650981_2.fastq.gz 1eb472b27012f9ee3fefc5b3dae67767;4e88f36a03168203dae85340e5c6b111 3412969926;3679284284 +Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563386 28-B1 double Unknown none Illumina MiSeq PAIRED WGS 1757509 ERR650982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650982/ERR650982_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650982/ERR650982_2.fastq.gz 7b9810ca55ca564e82ee2ac0623ddf12;c791b19b954a8ba21d74de0f707f62bc 270858211;294912723 +Kay2015 2015 10.1038/ncomms7717 body_28 ENA PRJEB7454 ERS563387 28-B2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 36081076 ERR650983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650983/ERR650983_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650983/ERR650983_2.fastq.gz b102410534687a47908d84095862866b;216f198cb2629ff6bda822d1a17ad2e0 4755814803;4803862805 +Kay2015 2015 10.1038/ncomms7717 body_25 ENA PRJEB7454 ERS563382 25-A1 double Unknown none Illumina MiSeq PAIRED WGS 1736006 ERR650978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650978/ERR650978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650978/ERR650978_2.fastq.gz 4f2d65e75a2646105a5d867c5faa4254;00c7d1a29999597f08281e6daeb29d1b 270685022;295684044 +Kay2015 2015 10.1038/ncomms7717 body_25 ENA PRJEB7454 ERS563383 25-A2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 61847101 ERR650979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650979/ERR650979_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650979/ERR650979_2.fastq.gz 618726b0208d73e502407163ce4e0e1d;d5bf4d4624287ca99d6c041c5b719481 8070107440;8125646876 +Kay2015 2015 10.1038/ncomms7717 body_80 ENA PRJEB7454 ERS563408 80-A1 double Unknown none Illumina MiSeq PAIRED WGS 14425334 ERR651003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651003/ERR651003_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651003/ERR651003_2.fastq.gz 584a371369da2ac6fdcc024b13733f61;38574be7e239e0bc06ecde7838ca6801 2113554397;2504491380 +Kay2015 2015 10.1038/ncomms7717 body_23 ENA PRJEB7454 ERS563378 23-A1 double Unknown none Illumina MiSeq PAIRED WGS 1316550 ERR650974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650974/ERR650974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650974/ERR650974_2.fastq.gz 217405c1701c28fcaacbfabbfce86700;cd308f5b88f7fc3791e49a617b21214f 168331723;176867990 +Kay2015 2015 10.1038/ncomms7717 body_23 ENA PRJEB7454 ERS563379 23-A2 double Unknown none Illumina HiSeq 2000 PAIRED WGS 40656814 ERR650975 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650975/ERR650975_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/ERR650975/ERR650975_2.fastq.gz 5ebc21d291c5eff4b428d4f0ae9bed98;ba7665251a6ff4b968f82820cb6870b7 5137244720;5296192874 +Kay2015 2015 10.1038/ncomms7717 body_92 ENA PRJEB7454 ERS563409 92-A1 double Unknown none Illumina MiSeq PAIRED WGS 20084713 ERR651004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_2.fastq.gz 3f07d29738185963f380f637b9b93065;0d96c823b7998af0b2165fe46b7e542e 2984512816;3476815638 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514388 LP05 double AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 9264910 SRR1048648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048648/SRR1048648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048648/SRR1048648_2.fastq.gz 738da4ab4145efa33209ebbfd1002b7f;6004bcf2e95b6f88212c693aeba08969 515051648;513247679 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514389 LP05U double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 71834085 SRR1048652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048652/SRR1048652_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048652/SRR1048652_2.fastq.gz 269f02d407a4d93a6a5b550268f66a75;e19a9799b49332448bb1b9273d5f429a 3933582727;3854433211 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514393 LP12a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 33711849 SRR1048658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048658/SRR1048658_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048658/SRR1048658_2.fastq.gz 3c87a176385c4f98305f06bf100103fd;80959490f6f5e6644b0316486073c163 1825650020;1801855391 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514395 LP12b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 46350179 SRR1048660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048660/SRR1048660_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048660/SRR1048660_2.fastq.gz 3d87171374f01f85ea78761cb9f01890;09009be49dce77faa7990c5e786409d4 2519289735;2472095014 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514397 LP12b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 32642754 SRR1048824 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048824/SRR1048824_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048824/SRR1048824_2.fastq.gz 3fb8e63f3fe5ae035290776bc9ef171f;0cbedd9adb3c74aa47976b3bab63c76b 1747841549;1729011882 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514398 LP14b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 2458378 SRR1048825 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048825/SRR1048825_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048825/SRR1048825_2.fastq.gz 1e7a353b6ecf2dd626ad114cec01d67b;bba17081894ba6e0601d8b58285c2fbe 134559139;133904277 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514399 LP15a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 17062341 SRR1048827 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048827/SRR1048827_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048827/SRR1048827_2.fastq.gz dd8e211d0c691989a797c923ea11ff8b;645c5d3fa453529b1c928b2f86d4bd65 919032570;916143810 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514400 LP15b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 14101733 SRR1048828 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048828/SRR1048828_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048828/SRR1048828_2.fastq.gz 037ee68ba2cd2934c4797bbb48d5c464;633cb3d21085b81680b7891ad88c6470 765557596;752905932 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514401 LP16a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11803310 SRR1048830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048830/SRR1048830_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048830/SRR1048830_2.fastq.gz 6ee26e6fd9832b9d0a145e7f182ccb74;c56607efb6d6790e15132412af2528be 640989818;640407775 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514402 LP16b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 342880 SRR1048831 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048831/SRR1048831_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048831/SRR1048831_2.fastq.gz 09c0d79db38deaab23126321dbf66dac;97bd2c0c70ca5c89365f5c4f70947999 18607139;18424668 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514403 LP17a double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 3501767 SRR1048832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048832/SRR1048832_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048832/SRR1048832_2.fastq.gz b34089c1a8d6ff24b1f0914346df486e;74ad0143ec8c9b5ef035fca11806df1b 191652014;190702779 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514404 LP17b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 3943496 SRR1048834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048834/SRR1048834_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048834/SRR1048834_2.fastq.gz d2913baafd1c38cb0de78466ef3918e4;6a1fedf1ceb2bc56db9511068037dba1 215941931;214245525 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514423 LP29_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8384630 SRR1048860 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048860/SRR1048860_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048860/SRR1048860_2.fastq.gz 3d47d425ca47654a091c0d2313e536f4;0a74b796367694c669219cd37592f269 439887926;435431330 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514423 LP29_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 18432613 SRR1048889 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048889/SRR1048889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048889/SRR1048889_2.fastq.gz d49b3c5501aeeaee8c700a944887d1ea;cfff98e2a1d386e950a0f19c0341ce37 931347105;933490878 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514424 LP30_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 9548184 SRR1048873 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048873/SRR1048873_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048873/SRR1048873_2.fastq.gz 81d9cb0163ecaf0d1a6f9a6057079bf4;8d8014c472f5358f0e2e1746cf17299f 494563649;493033132 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514424 LP30_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 19803183 SRR1048890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048890/SRR1048890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048890/SRR1048890_2.fastq.gz 0ac3054371dc152d85e16ba9d24bcd5f;7203b1236aaa9dc85e262143e2120a84 989815335;1011301712 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514425 LP31_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 6555618 SRR1048874 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048874/SRR1048874_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048874/SRR1048874_2.fastq.gz 9a8c0d9a2eef2e178dd2c6c91d853bb6;b07207b7c34cc50e8fcb164f0c442e73 345474517;336587353 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514425 LP31_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 18521072 SRR1048891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048891/SRR1048891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048891/SRR1048891_2.fastq.gz 77cb5c2cc65ad8f83388c85df8f35c6f;32fc803ef9df93e6b1586e89ca720592 934839782;927683186 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514426 LP32_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 10615750 SRR1048877 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048877/SRR1048877_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048877/SRR1048877_2.fastq.gz bd88347fd253e9d3123aecec0f0b019c;79970aa6bba0409bfdd340dfe4782d6c 557046272;548620748 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514426 LP32_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 15406110 SRR1048892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048892/SRR1048892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048892/SRR1048892_2.fastq.gz b79b119436097bee8d1c698dbde4b582;19289ed7689a66c19e27e44c6e1a4573 775078820;780448744 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514427 LP35_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 7822702 SRR1048878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048878/SRR1048878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048878/SRR1048878_2.fastq.gz 27633a877263815b69bdad790ca5d3db;ceb677f40d66af1ac0f63531e654435d 415422070;408673301 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514427 LP35_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11879769 SRR1048893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048893/SRR1048893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048893/SRR1048893_2.fastq.gz b5a239e16825659297434d940b3c82c2;03fa123fc48e6778f9d6ed3e14368ac8 607214726;604919870 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514429 LP36_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 7469850 SRR1048883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048883/SRR1048883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048883/SRR1048883_2.fastq.gz d2f863e54e5810372ea7a270bdf40f9e;663c95be57ab526ab25dda212207aeb3 392354535;386093532 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514429 LP36_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 16850293 SRR1049476 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1049476/SRR1049476_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1049476/SRR1049476_2.fastq.gz 73f8d485e22e2e253b3313c92268334f;8b85140e9f5ade70ea13d0d8fd40f441 845270872;846603009 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514430 LP37_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8129308 SRR1048884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048884/SRR1048884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048884/SRR1048884_2.fastq.gz 81eeda56405648220fbd39a62f697334;b2822a3745d130f5200bbe1e6f3fc668 427035856;419310539 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514430 LP37_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 24960979 SRR1048895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048895/SRR1048895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048895/SRR1048895_2.fastq.gz 0f770291b745a90b6f614af83539b6b2;0ea5202244bf4642723bbf17fbfd2d33 1241726045;1239974850 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514431 LP38_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 11245180 SRR1048887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048887/SRR1048887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048887/SRR1048887_2.fastq.gz 4486508cbbb03c8cc4a75f7e007141ef;2d9587add98ad1ccdd54f359637439f6 589185452;583337627 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514431 LP38_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 22002992 SRR1048897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048897/SRR1048897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048897/SRR1048897_2.fastq.gz f498d2d076dce643bd89fe02f817d95a;c4122f71741a2c142197f6c0d7555eac 1104867268;1115838759 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514435 LP29b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 311986 SRR1048899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048899/SRR1048899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048899/SRR1048899_2.fastq.gz 2c6de6f13082bc89d7ef1d84d78afd56;93a28401b9a61415d994195f90f0b601 15342223;15664237 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514436 LP30b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 328263 SRR1048900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048900/SRR1048900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048900/SRR1048900_2.fastq.gz 99622a85f3069a39f84b079252561619;a6185486a6448feda62fef8ed6f7a0f6 15788938;16400718 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514437 LP31b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 279475 SRR1048901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048901/SRR1048901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048901/SRR1048901_2.fastq.gz 93efc49537c804e1ed7a1dc1fd4c7583;b9707c170f935105da97f553457ff988 13645486;13761235 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514438 LP32b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 295991 SRR1048902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048902/SRR1048902_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048902/SRR1048902_2.fastq.gz 45500519a42a62caa10af7f1beadca9d;94f7cd46f098274276172cb1a633fcab 14573520;14986154 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514439 LP35b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 349048 SRR1048903 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048903/SRR1048903_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048903/SRR1048903_2.fastq.gz a736fab3d41b9e4c59a8a94d891f0f45;5e72fe3395c044f51f9131bf7a6ac640 17026111;17500539 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514440 LP36b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 308242 SRR1048904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048904/SRR1048904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/004/SRR1048904/SRR1048904_2.fastq.gz b61c15225a83d6cf000f11945f617a7d;ccf227974d5c79a520394485ef123ccd 15057184;15256103 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514441 LP37b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 298178 SRR1048905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048905/SRR1048905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048905/SRR1048905_2.fastq.gz 41aeeac775dbd0d75bafeeb9db3bb651;1dd861310793f02c6f07b28e8c8f07e6 14225303;14375253 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514442 LP38b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 390426 SRR1048906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1048906/SRR1048906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/006/SRR1048906/SRR1048906_2.fastq.gz cb39ea598ed8b1254c6ccd5b3030425c;b28fa45d565b30a646b4ef744a5cc6ca 19021643;19735091 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514507 LP55 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 600094 SRR1048911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048911/SRR1048911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/001/SRR1048911/SRR1048911_2.fastq.gz 076ae832ced00b05115e640ddabab23d;56f9d1ea30a1deac51850f2e1504632c 29074560;29647819 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514506 LP53 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 608503 SRR1048910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048910/SRR1048910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/000/SRR1048910/SRR1048910_2.fastq.gz 6ca326d20554ec24c960fe562dac9ce7;55c7e058ff92cbadac69cb08f0f45335 28972125;29329377 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514505 LP51 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 494854 SRR1048909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048909/SRR1048909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/009/SRR1048909/SRR1048909_2.fastq.gz eca63642ab4407cdecb56e710b56d5ea;fd04176739e6e393dd063029f6c9c6da 24143702;25528106 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A120 SRA PRJNA231474 SRS514444 LP49 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 618336 SRR1048908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048908/SRR1048908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048908/SRR1048908_2.fastq.gz cf04108c2b7fc1252f58bc753050a30e;c63849a9adefba58c60c1ee53e0543ea 30242109;30611196 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514391 LP07 double AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 6924154 SRR1048653 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048653/SRR1048653_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/003/SRR1048653/SRR1048653_2.fastq.gz de574469b89066b9044de84608b9390c;b70330498ab8c4471f3c9ce8fc8f3c44 383016697;383992756 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514392 LP07U double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 8345921 SRR1048655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048655/SRR1048655_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/005/SRR1048655/SRR1048655_2.fastq.gz 1d39e1610f57e4110ab1985badb3fc25;84156889fb887f751660deddda6038c0 455354309;454724543 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514432 LP39_in-solution double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 8412498 SRR1048888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048888/SRR1048888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048888/SRR1048888_2.fastq.gz 8747b60981085c48f403cc4c095f31d2;728174b17ef814fe0f80de3e83da48ce 445959648;442951386 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514432 LP39_array double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED Targeted-Capture 17718231 SRR1048898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048898/SRR1048898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/008/SRR1048898/SRR1048898_2.fastq.gz fafda2ebeebd7779e8a39c1826ab8141;cafaec4b80116240d77ae69cef16cafc 914341566;930528598 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514443 LP39b double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 314854 SRR1048907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048907/SRR1048907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/007/SRR1048907/SRR1048907_2.fastq.gz 6987d61d22fe27f06c60b3841fdb81f9;be661ff69d18b5120ae27c6a3ada9766 15447233;15582845 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 A76 SRA PRJNA231474 SRS514508 LP57 double AccuPrime Pfx DNA full-udg Illumina HiSeq 1500 PAIRED WGS 597516 SRR1048912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048912/SRR1048912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR104/002/SRR1048912/SRR1048912_2.fastq.gz 55eae009521077c05ef9146118af0147;261eee9b96ec2328b76c9ff5ca730f80 29112666;29795658 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982024 CHS119_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 18544593 ERR4494968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494968/ERR4494968.fastq.gz 897ae8a19b07fea7a89fd3e3f9bc9b53 629129485 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982025 CHS119_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7853634 ERR4494969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494969/ERR4494969.fastq.gz a2f60689eea9a454cab7f7f2fd38df38 268727988 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982023 CHS119_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1354466 ERR4494970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494970/ERR4494970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494970/ERR4494970_2.fastq.gz cfd32515f6982804b1dc87a3e6576503;b56f1affbb9146dc3e0fc916d21fbc14 61543828;72970113 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982027 CHS119_ba_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 15053528 ERR4494971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494971/ERR4494971.fastq.gz 7427d28b900c421f46db0aa19708dfc4 517952256 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982028 CHS119_bb_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19621391 ERR4494972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494972/ERR4494972.fastq.gz b7f9ccaaf9be0a8736c9fddb034027bc 660663874 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982026 CHS119_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1012289 ERR4494973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494973/ERR4494973_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494973/ERR4494973_2.fastq.gz c58d221b0f6e88261ed4bf120fd42e35;9d05dd2cae9f08b3eecf3dabd145753a 45977766;53843896 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982029 CHS119_E1L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 14158896 ERR4494974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494974/ERR4494974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494974/ERR4494974_2.fastq.gz 7c6ec6fde27314d45db244bd58b74ea8;5516e5827bc8f7a2a634b582fdc025bb 413726823;445684438 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982032 CHS119_E2L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17631128 ERR4494975 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494975/ERR4494975_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494975/ERR4494975_2.fastq.gz 20aaf81176d3b03d26bb65c0cb9afdf5;3a96841faa3d2654b92946b251f4ec8d 499581375;550318120 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982033 CHS119_E2L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4556164 ERR4494976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494976/ERR4494976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494976/ERR4494976_2.fastq.gz 35e2f66e64ae18debc1065563da198ef;78a7371aa475e2ffc0064dd24f110b11 133623665;145745445 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982034 CHS119_E2L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1663850 ERR4494977 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494977/ERR4494977_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494977/ERR4494977_2.fastq.gz f7a29387b7074fb44453f0de35b686f4;b3515406a8303cc9e18bb6b14a8f22ba 48997038;52514789 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982035 CHS119_E2L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3737631 ERR4494978 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494978/ERR4494978_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494978/ERR4494978_2.fastq.gz 1da7d21a0508a1197cd8bebb470e762c;e02dd5ba000379b29b97c46aaeff3c18 111406815;116766235 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982036 CHS119_E3L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4588103 ERR4494979 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494979/ERR4494979.fastq.gz 01b79a5571829a0add1a895c9abcfceb 161121391 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982037 CHS119_E3L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12491210 ERR4494980 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494980/ERR4494980.fastq.gz c81babe37881751bb1528d4bb87fd0bd 479418962 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982038 CHS119_E3L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3956358 ERR4494981 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494981/ERR4494981.fastq.gz ef4468f581b9045e0703c9339fca4f24 136755211 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982039 CHS119_E3L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3393085 ERR4494982 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494982/ERR4494982_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494982/ERR4494982_2.fastq.gz 5ee91be0228b2a60cf574a3062af3164;a5fdc31e7ad6bc68a0d0df33be739653 99592440;109358894 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982040 CHS119_E3L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5636105 ERR4494983 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494983/ERR4494983_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494983/ERR4494983_2.fastq.gz 45cabe5104c6b5deba476ac0a63793a2;f83cb2d4a2de90b730de13f462169212 166239014;177686093 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982041 CHS119_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7222618 ERR4494984 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494984/ERR4494984.fastq.gz b40a393d204082df16692db07ec30910 271246781 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982042 CHS119_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8381899 ERR4494985 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494985/ERR4494985.fastq.gz c013acb4abc92f89e93fb00e8f58c6a2 322268109 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982043 CHS119_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5839129 ERR4494987 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494987/ERR4494987.fastq.gz 6aa8a2672773c004a21622009631bab9 222871816 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982044 CHS119_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7267651 ERR4494988 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494988/ERR4494988_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494988/ERR4494988_2.fastq.gz d98f5072c9742cd22155e6aa87935b75;7f8cd97f78a217ef3e961136c4a60d43 214842733;235433638 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982045 CHS119_E4L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13098014 ERR4494989 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494989/ERR4494989_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494989/ERR4494989_2.fastq.gz 894f60b0faf392b5d9e23a5d4e8f5e6b;23f9e140e7c863fdbd3952e618c2772a 385547540;422200009 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982046 CHS119_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2462843 ERR4494990 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494990/ERR4494990_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4494990/ERR4494990_2.fastq.gz 29e3e6bce3c51aebc5e049fd1a398032;c8743ae367a169b10f012062e84929f1 71400417;79126223 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982047 CHS119_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 11355240 ERR4494991 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494991/ERR4494991_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4494991/ERR4494991_2.fastq.gz 892aa2b6d16b1c562f8dc9dcb2f70808;4c084553bc82a97a5d32be7967ff1560 328175706;360458178 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982048 CHS119_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2734077 ERR4494992 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494992/ERR4494992_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4494992/ERR4494992_2.fastq.gz 8e1bb65e7a436ade59a0b0b1b45d8788;02fe2d9c3942d2bf7fa0d06b6447d3b6 78160190;83994103 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982049 CHS119_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1791983 ERR4494993 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494993/ERR4494993_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4494993/ERR4494993_2.fastq.gz 1b7154ac83d1e56aed7e58e2971f9078;be2ec5529a9eba5e45df35754382125a 51877152;56770388 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982050 CHS119_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 12546676 ERR4494994 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494994/ERR4494994_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4494994/ERR4494994_2.fastq.gz e4f3fdf9e0f9d620c3c0a4b7944f9028;ef20b4e9be7379597e232a23b628054c 361974553;397422576 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982052 CHS119_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 12807483 ERR4494995 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4494995/ERR4494995.fastq.gz 87705146d9529f5e89770e214371d6d5 478054123 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982051 CHS119_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 8337219 ERR4494996 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4494996/ERR4494996.fastq.gz 275f6855870d09e23dc0e519e045e80f 325586100 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982054 KM14-7_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6718712 ERR4494997 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4494997/ERR4494997.fastq.gz 9499548557a6f1401234595e13d4bae1 230666636 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982055 KM14-7_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5468926 ERR4494998 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4494998/ERR4494998.fastq.gz 610de41f2ca1369e1cc1d6b58d9400ed 189639312 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982056 KM14-7_ac_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3747501 ERR4494999 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4494999/ERR4494999.fastq.gz 71306af4541ffa42a7852a0afbffdf7c 131697857 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982053 KM14-7_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 3885617 ERR4495000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495000/ERR4495000_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495000/ERR4495000_2.fastq.gz b83895d7009f5bd0b2727289a0c29c5a;8f1385a1cd0ff5b2fcf8ec63edfc65b0 176259481;210605553 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982057 KM14-7_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 2363278 ERR4495001 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495001/ERR4495001_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495001/ERR4495001_2.fastq.gz 69c87ba3a05c3e7046aed663dc93610f;af73fe846c961fdd90f30eb38b65070a 108473873;126443934 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982058 KM14-7_E1a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 16703377 ERR4495002 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495002/ERR4495002_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495002/ERR4495002_2.fastq.gz 8fca9bb5d435c5c8c27fc5decf2a91bf;23eafbb2bcb8eead858bdb1525e57754 487285164;538788626 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982059 KM14-7_E2a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 782087 ERR4495003 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495003/ERR4495003_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495003/ERR4495003_2.fastq.gz 435a69a9953ece2e36c019a6a93baa88;0d28620d0db97ba178b3ea85a5d03308 23321878;25168161 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982060 KM14-7_E2b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1715519 ERR4495004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495004/ERR4495004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495004/ERR4495004_2.fastq.gz d056acc791d6a539b3acd29e50b3e570;5706b6117967c5d992a9384b664ae045 51871657;53785864 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982061 KM14-7_E2L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3873153 ERR4495005 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495005/ERR4495005.fastq.gz c4bb61f5bf049861057eaef23678fb33 135091821 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982062 KM14-7_E2L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7642034 ERR4495006 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495006/ERR4495006.fastq.gz 951137b10e07c8dd6041f97e31c9c4a7 254727172 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982063 KM14-7_E2L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4438800 ERR4495007 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495007/ERR4495007.fastq.gz 1d3bcb3a290e411f9ac3cdbc902d843f 152637278 +Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982084 PD28_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3630293 ERR4495008 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495008/ERR4495008_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495008/ERR4495008_2.fastq.gz ff86e86f6420160dffb9cc617046fa9d;792c38130336aaab353760ca84d2e0fd 153699206;183355282 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982065 KM14-7_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 8001677 ERR4495009 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495009/ERR4495009_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495009/ERR4495009_2.fastq.gz 1147702b7edf5b6cc7a3e73170ee9707;d6ec126788ff2b0c97f5dd10d4a599a5 233519320;255614550 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982066 KM14-7_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17969549 ERR4495010 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495010/ERR4495010_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495010/ERR4495010_2.fastq.gz 66a6563ce7876acea38020006febb801;fe67815c956c7f27c6b0c7e3bf2554b5 524552560;573746558 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982067 KM14-7_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1722548 ERR4495011 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495011/ERR4495011_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495011/ERR4495011_2.fastq.gz 31c28fadf7ec224948f7c0b034aa8300;da600d4f8af8ef9d62cc1c4309b14df1 50226759;53622722 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982068 KM14-7_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2044012 ERR4495012 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495012/ERR4495012_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495012/ERR4495012_2.fastq.gz 0482550709b9e5b66cc22eeab33bc2e4;941d3bf30ebae031e96ecd76cc79b6cb 59626873;64037057 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982069 KM14-7_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2723532 ERR4495013 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495013/ERR4495013_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495013/ERR4495013_2.fastq.gz a61094f360f28f3585fc7a4ef21515c1;39a1ea6133744cb8aa2b7f1cb51b7f2e 79994510;87194220 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982070 KM14-7_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10762156 ERR4495014 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495014/ERR4495014_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495014/ERR4495014_2.fastq.gz a8a7b4274c1ba72268cad64ad77724a4;7b7122b630e25e71cdbb6e21e76a49ac 315579658;343023702 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982071 KM14-7_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10241941 ERR4495015 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495015/ERR4495015_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495015/ERR4495015_2.fastq.gz 44a14c0ac611540a0f486f910df14e24;3a1445bf24526a2a2b93f0e23222e8b4 300491183;328913835 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982072 KM14-7_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2248130 ERR4495016 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495016/ERR4495016_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495016/ERR4495016_2.fastq.gz 483c30b56c265b558963fc0170134845;72c7fd5a16fe6a4ee173bff9b245b157 67077523;69458891 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982073 KM14-7_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1334686 ERR4495017 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495017/ERR4495017_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495017/ERR4495017_2.fastq.gz c40dc6e58a72810d49ab39bfa0a92e93;d5ccc7c151ccc897d06db09f229432d5 39535291;42865512 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982074 KM14-7_E6L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 134760 ERR4495018 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495018/ERR4495018_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495018/ERR4495018_2.fastq.gz c36aeeb0d93939e7c019b18ed0ff8eae;8bc5623fae5e8325140bfe460f114f90 4123994;4560940 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982075 KM14-7_E6L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1841494 ERR4495019 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495019/ERR4495019_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495019/ERR4495019_2.fastq.gz c89d405bc17d4c2d9e7ead11b3df22d3;4f5fa0472451abb478e1211ff1f41f55 53636583;58191799 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982076 KM14-7_E6L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10318071 ERR4495020 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495020/ERR4495020_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495020/ERR4495020_2.fastq.gz c991786ff882786504e048d630960506;d0f69348c62d36fa5ed35e4a0498c04c 299680782;328221359 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982077 KM14-7_E6L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1709190 ERR4495021 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495021/ERR4495021_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495021/ERR4495021_2.fastq.gz 7ad922ff5190a927614c5766ea365d82;406c3aef25d02fe86374cc6901eaf14d 50079130;53917924 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982078 KM14-7_E6L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9001415 ERR4495022 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495022/ERR4495022_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495022/ERR4495022_2.fastq.gz 6eabad0d34f1b9b275ca2e5a6813cf63;20d7fd4d5314cdab1300b64267c47970 261810646;285592996 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982080 KM14-7_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 5844187 ERR4495023 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495023/ERR4495023.fastq.gz c7e132f3e31f9a368fb10b5918bad1b6 226140399 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982079 KM14-7_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2413040 ERR4495024 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495024/ERR4495024.fastq.gz 0d1af4fa8dcfa03ae90685918ab58d85 93918391 +Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982081 PD28_E1L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 32162506 ERR4495025 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495025/ERR4495025.fastq.gz 052df6ccc7a1e95fd721855756648a85 1198935441 +Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982082 PD28_E1L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 46064633 ERR4495026 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495026/ERR4495026.fastq.gz 83c7281b1f700859e6a35a80483425f6 1713566727 +Majander2020 2020 10.1016/j.cub.2020.07.058 PD28 ENA PRJEB35855 ERS4982083 PD28_E1L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17219244 ERR4495027 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495027/ERR4495027.fastq.gz 2dd8d3c017cda72665cd53c01c4fb5d1 666617618 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982086 SJ219_aa_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4134283 ERR4495028 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495028/ERR4495028.fastq.gz 64a1100e9955f8201641c4d117b55272 142866732 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982087 SJ219_ab_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6983283 ERR4495029 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495029/ERR4495029.fastq.gz e031018b646c7a87d4b320fbe85190d9 257134672 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982085 SJ219_a_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1950098 ERR4495030 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495030/ERR4495030_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495030/ERR4495030_2.fastq.gz 7d481ca6578a9b1db1a25adc790863ba;78e1a78d7add867a9c935c528560e22b 84600777;101461871 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982089 SJ219_ba_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7345084 ERR4495031 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495031/ERR4495031.fastq.gz 52cd924973276d5b29d3199ea2646619 231781836 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982090 SJ219_bb_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7590544 ERR4495032 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495032/ERR4495032.fastq.gz 917a9bef942abda7977073c6dd3c9a10 264472200 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982088 SJ219_b_nonUDG_ss_SyphilisArrayCapture single Herculase II Fusion DNA none NextSeq 500 PAIRED Targeted-Capture 1932354 ERR4495033 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495033/ERR4495033_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495033/ERR4495033_2.fastq.gz 838cf589b6f2b7287b23fa7843dd5432;5462c7087ff4550564f8392b8026107f 83750812;99285425 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982091 SJ219_E1a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 41641003 ERR4495034 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495034/ERR4495034.fastq.gz fa2bfef6f0e1b50fc78e900bad5fb448 1342087024 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982092 SJ219_E1b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2326655 ERR4495035 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495035/ERR4495035_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495035/ERR4495035_2.fastq.gz 96882b3ea60ca09a4ea3f297a0c1aef5;7d91ee74c60b4f96ba0509e5fad5e4f5 67850722;73050245 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982093 SJ219_E2a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2033564 ERR4495036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495036/ERR4495036_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495036/ERR4495036_2.fastq.gz 44375dea59fcffc3ec0732046d86014c;885fb57011755ddb0a98455e9b9eff08 59421464;63794496 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982094 SJ219_E2b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2828440 ERR4495037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495037/ERR4495037_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495037/ERR4495037_2.fastq.gz 1eac9067933728d55b886ee4e2b75df5;3db88903d9b99ebfa1800f084740924e 83047582;90121201 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982095 SJ219_E2c_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 1849161 ERR4495038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495038/ERR4495038_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495038/ERR4495038_2.fastq.gz ba5625b8a2c22eace1501236b36646fa;969eac18c16bf7a4e4ca196027681134 53998954;58107252 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982096 SJ219_E3a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6171625 ERR4495039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495039/ERR4495039_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495039/ERR4495039_2.fastq.gz 412493e52edc7e699e98cbc755c72894;f133453f91f4c4e734a708a9ba98a1dd 181212049;200496717 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982097 SJ219_E3b_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 14443974 ERR4495040 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495040/ERR4495040_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495040/ERR4495040_2.fastq.gz e42c7e801f99b7bcc81cec3c714c8128;9790453a2a4c2733b79e655a9546af74 422701745;466376356 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982098 SJ219_E3L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12304650 ERR4495041 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495041/ERR4495041.fastq.gz 8f2df6150a297d1e732003858dae3108 442806274 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982099 SJ219_E3L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8819404 ERR4495042 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495042/ERR4495042.fastq.gz 6d35f94e952629c45dedf51cf36bc7ee 305564182 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982100 SJ219_E3L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12319067 ERR4495043 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495043/ERR4495043.fastq.gz f090a143df7470c333d3e147bb6bff57 453781010 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982101 SJ219_E4L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2435392 ERR4495044 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495044/ERR4495044_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495044/ERR4495044_2.fastq.gz afb320ca470906960035dd44b42f4ffc;cdd1ccc0e20876ffcbd5dff0ea0e5dac 71948855;78250635 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982102 SJ219_E4L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 957 ERR4495045 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495045/ERR4495045_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/005/ERR4495045/ERR4495045_2.fastq.gz 8ef9353717483f5dfa5bfa4930d81109;6bad7e2f0e602bed16679caf121f6869 25249;29992 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982103 SJ219_E4L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2638629 ERR4495046 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495046/ERR4495046_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/006/ERR4495046/ERR4495046_2.fastq.gz 18d64c3c9d0975c302b503e71fbe56a4;621233cd8166e8e41ad550e03a6044c6 78410505;86411888 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982104 SJ219_E4L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3140357 ERR4495047 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495047/ERR4495047_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/007/ERR4495047/ERR4495047_2.fastq.gz 1d4c141accb954598a3a467ec5bff209;5244841f45e4f60ce2641e81bb15983d 93039195;100420934 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982105 SJ219_E4L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6483928 ERR4495048 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495048/ERR4495048_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495048/ERR4495048_2.fastq.gz 975c6e65ea3ad5bdbbf90882ffeaf317;3ebde2847df870a1ff907b236984af87 190533295;208346724 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982106 SJ219_E5L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 10379191 ERR4495049 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495049/ERR4495049_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495049/ERR4495049_2.fastq.gz bcf93add557fd7dc2afc33ecba995cf1;6ef6aa2e0f19d2759358b12d74baa23c 308406121;332803590 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982107 SJ219_E5L2_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2577305 ERR4495050 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495050/ERR4495050_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495050/ERR4495050_2.fastq.gz 76971fb71eade50fd3667ee3e5a1521d;3b7363a4531c8b5c9d43d1fa5916800d 76392643;82872027 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982108 SJ219_E5L3_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4856270 ERR4495051 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495051/ERR4495051_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495051/ERR4495051_2.fastq.gz 896d191059ebe4b688f397786e4d3dbc;eda32425f88cb597fa141cd20b8d3317 144442467;158795227 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982109 SJ219_E5L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3318660 ERR4495052 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495052/ERR4495052_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495052/ERR4495052_2.fastq.gz 833de69521aa4876df95b4419a4ba78d;a1587ad25bf7ff37df4eaf6cc91bf544 98810926;107534624 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982110 SJ219_E5L5_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5692534 ERR4495098 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495098/ERR4495098_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/008/ERR4495098/ERR4495098_2.fastq.gz 754fb271c57dcbf16ea73fb03c210cca;6549ee70784e2aeeaf98be2bef229c64 168039525;183135933 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982113 SJ219_nonUDG_ds_shotgun double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE WGS 3888293 ERR4495099 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/009/ERR4495099/ERR4495099.fastq.gz 9687ef1e2c7f8e8e55e85f1cf675f572 148538604 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982112 SJ219_nonUDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3303778 ERR4495100 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/000/ERR4495100/ERR4495100.fastq.gz 22aede18be4284f9954c34f34fd0d515 131319287 +Majander2020 2020 10.1016/j.cub.2020.07.058 SJ219 ENA PRJEB35855 ERS4982111 SJ219_E5L6_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7817537 ERR4495101 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495101/ERR4495101_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/001/ERR4495101/ERR4495101_2.fastq.gz 8ef8b6b43eae64e297edb94193288264;57b5cfde61449b40a73119d3e18748cc 231636751;253964329 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982030 CHS119_E1L4_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2666880 ERR4495102 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495102/ERR4495102_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/002/ERR4495102/ERR4495102_2.fastq.gz dd325033534c8bf9c49144f98ed23c54;d579a3b591a216d74bde0d3502290153 79155192;85990179 +Majander2020 2020 10.1016/j.cub.2020.07.058 CHS119 ENA PRJEB35855 ERS4982031 CHS119_E2L1_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20343352 ERR4495103 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495103/ERR4495103_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/003/ERR4495103/ERR4495103_2.fastq.gz 5595c51393070c7eb1361e1f437ded26;2b19f80fb96efc9d7815c223fde47ee5 574767628;621774712 +Majander2020 2020 10.1016/j.cub.2020.07.058 KM14-7 ENA PRJEB35855 ERS4982064 KM14-7_E3a_UDG_ds_SyphilisArrayCapture double Herculase II Fusion DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5868366 ERR4495104 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495104/ERR4495104_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR449/004/ERR4495104/ERR4495104_2.fastq.gz e6f86e77a9d2fca8676df8eab61e8cec;25d40c9fd361e98a3f83f4ce96f8b1be 175408825;193189308 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942275 B0624 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 24398268 ERR1094787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094787/ERR1094787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094787/ERR1094787_2.fastq.gz 15b228f1f6e816d00b165e9b8677ed82;183ea7641cb8fc128b21c7011407eb52 2073374396;2104934249 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942266 A1141 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 294435 ERR1094778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094778/ERR1094778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094778/ERR1094778_2.fastq.gz 3ddfcf48d080d9ddc311a7fa5ac3c321;723002543630cfbb81ede88ffa7fb6ab 19217293;19737362 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942283 C0056 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 21790245 ERR1094795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094795/ERR1094795_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094795/ERR1094795_2.fastq.gz 56b9f99c0c1413f0479077afa6c58aaf;b2e8c5efa1053b64670f1fb80ed00861 1884405031;1896513127 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942284 C0057 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 19884835 ERR1094796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094796/ERR1094796_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094796/ERR1094796_2.fastq.gz 1eb1eba287d2e58b191b75dbe5aa950d;e65d6c52093d605b7286c283231a14e5 1710896646;1721437182 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942285 C0058 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 27481493 ERR1094797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094797/ERR1094797_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094797/ERR1094797_2.fastq.gz e23bc6695c4cef3c1bee9ed359beac5c;2fe36b6308daeac5c85cf16a707142e5 2378343725;2397406421 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942286 C0059 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 31004221 ERR1094798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094798/ERR1094798_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094798/ERR1094798_2.fastq.gz befebf2fd94aadb6bc92bf96f1213774;877430fbf17f9f9c527b1bf0db4a054b 2650871975;2605058846 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942287 C0360 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 19016942 ERR1094799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094799/ERR1094799_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094799/ERR1094799_2.fastq.gz 90d16ebd3dfcfc401cb89bf898746b07;d55b4a7d8c84a2ee802bd979aab9d64a 1597228112;1611945870 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942288 C0361 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 14930879 ERR1094800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094800/ERR1094800_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094800/ERR1094800_2.fastq.gz 30eac3a4a8bb6f7327beb259dee2f045;2d6138e921e6cd6a2207821cffea113d 1248148942;1257014466 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942289 C0362 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 38888 ERR1094801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094801/ERR1094801_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094801/ERR1094801_2.fastq.gz b5a59506f85fb5fee4be8dfb376b71d1;2b9e520031bfb60122edc402d659c0a0 3214553;3264921 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942290 C0363 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 39601058 ERR1094802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094802/ERR1094802_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094802/ERR1094802_2.fastq.gz 38a37682190325908066762c6fc335a4;952a694e1dc03b4a35bda971bb50a335 3310079487;3268455957 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942291 D0022 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 77705846 ERR1094803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094803/ERR1094803_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094803/ERR1094803_2.fastq.gz 83ac9686b1cf3735d6c27c0d044b82cf;32fb980b0fe8732843cf7bde21161faa 6124261414;6218686478 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942291 D0022 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 78030109 ERR1094804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094804/ERR1094804_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094804/ERR1094804_2.fastq.gz f6ef192157173ba9b3d270ab8048f975;15ab1bf17c275cf133bcd211c0a367f7 6176413071;6249361452 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942292 D0023 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 17648750 ERR1094805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094805/ERR1094805_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094805/ERR1094805_2.fastq.gz 9f54d642c0b5518e55785e18e4e672de;e757e9da66bcbf0002663eec1fe9eb59 1400003557;1423227557 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942292 D0023 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 17808220 ERR1094806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094806/ERR1094806_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094806/ERR1094806_2.fastq.gz 1c132ea70f4ee4999d8db485440098b9;ca4d3536ce3ae51cf93999e482e444e2 1418600506;1436655562 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942293 D0024 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 99095046 ERR1094807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094807/ERR1094807_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094807/ERR1094807_2.fastq.gz 619adddffce4139ef856daecc814ae14;1c99a9f2dd36c3fc8389931cc749c454 7697616858;7773524014 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942293 D0024 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 95495627 ERR1094808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094808/ERR1094808_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094808/ERR1094808_2.fastq.gz 2ba3a90677e5d613d89ca550fb74f123;ccb10948268e97a02d5425b5658a3f96 7330758821;7402325955 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942294 D0025 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 25349515 ERR1094809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094809/ERR1094809_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094809/ERR1094809_2.fastq.gz 40b20edf3b07ac307171c731a1d26706;d102292b82322a7eb8cc9373d1dd9a7b 1979818803;1938540456 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942294 D0025 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 24587412 ERR1094810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094810/ERR1094810_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094810/ERR1094810_2.fastq.gz 3709774b2ffc7095c69b809e907485a4;cb624c9259c3aa1d948405673ea5b0dd 1897906749;1858865023 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942267 A1142 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 237328 ERR1094779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094779/ERR1094779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094779/ERR1094779_2.fastq.gz c6b3a2b956b18a9e6b3cf93a1e32c01b;b8262717919970562eb700d00210f119 15943170;16493333 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942277 B0626 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 35008351 ERR1094789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094789/ERR1094789_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/009/ERR1094789/ERR1094789_2.fastq.gz 566daf81f25956cd289dd3b6b1cbd853;b49f4195caaf9e9c172c7e1f68e01761 2916091531;2985105539 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942270 A1146 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 15177460 ERR1094782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094782/ERR1094782_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/002/ERR1094782/ERR1094782_2.fastq.gz 37bc35bb045144e3c49e1c8620c5c78f;97c2a4697839d16f026b5b30baa6e7a8 967029359;994344194 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942274 B0623 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 21623712 ERR1094786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094786/ERR1094786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/006/ERR1094786/ERR1094786_2.fastq.gz 1ad039bed5fb2e451e1fc7fa09e5eda5;4ede837c863e3aea318c7de35707ad79 1856108274;1891725518 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942269 A1145 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 9410725 ERR1094781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094781/ERR1094781_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/001/ERR1094781/ERR1094781_2.fastq.gz d4fe78eed70163576d3f20fead39177c;8d24ef6f61b739191ff845763b9bc8db 611468550;626024052 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942268 A1144 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 11934198 ERR1094780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094780/ERR1094780_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/000/ERR1094780/ERR1094780_2.fastq.gz 09cc0693c163f3c306c6861cefe2a4b3;c13f8482be40dd93dabb7e1c5bccedab 717937541;729522678 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942271 B0620 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 15176127 ERR1094783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094783/ERR1094783_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094783/ERR1094783_2.fastq.gz 1634a8b403b34691ad22b4fa5d53afe3;8d9ff469779df035a6764f14777bb8d5 1306669325;1342661167 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942265 A1140 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 13227134 ERR1094777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094777/ERR1094777_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/007/ERR1094777/ERR1094777_2.fastq.gz 9fade193957c867802accb7ed8822df3;88cc76f2e486932155fda76053b616ee 963225881;981225373 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942273 B0622 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 31115751 ERR1094785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094785/ERR1094785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/005/ERR1094785/ERR1094785_2.fastq.gz 8a410006dbcdaa3ca87e958212310d48;98ed074d87002c0372df31565e4efd98 2632853759;2693047826 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942272 B0621 double AccuPrime Pfx DNA none Illumina HiSeq 2000 PAIRED Targeted-Capture 20871329 ERR1094784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_2.fastq.gz a0a27714cf273c2af218ae7e84cb765a;42068f47a62ae52ef2d94fcdea1173d4 1734887058;1769681767 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942281 C1824 double AccuPrime Pfx DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 60954954 ERR1094793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_2.fastq.gz d195918dc21bd80fcbcf5e3055c9e1eb;efd29499b049aaaa338b81fc95ca9965 5116924426;5280303595 +Maixner2016 2016 10.1126/science.aad2545 Iceman Stomach/Intestine (1054/1051/1063/1036) ENA PRJEB11511 ERS942282 C1825 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 PAIRED Targeted-Capture 63743693 ERR1094794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_2.fastq.gz e66f62757a607246c7b69add6d8bf543;b1ddb80eac2e76489f86883b945f85a6 5352278174;5537792499 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18023_Japan_Edo_4 SRA PRJNA608555 SRS6212663 A18023_Japan_Edo_4 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 28256540 SRR11176627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/027/SRR11176627/SRR11176627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/027/SRR11176627/SRR11176627_2.fastq.gz 5831bf5f70ed34a90a4b6f8a41ef3fe1;876795c72323bbe231d4f0ea73ee5aa6 1457889020;1701645469 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18021_Japan_Edo_2 SRA PRJNA608555 SRS6212661 A18021_Japan_Edo_2 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 16275747 SRR11176629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/029/SRR11176629/SRR11176629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/029/SRR11176629/SRR11176629_2.fastq.gz 2f7cbec3ee788177cd0757af854d791f;6d775029ac36228432ef298973a23ec6 824309761;986790734 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18020_Japan_Edo_1 SRA PRJNA608555 SRS6212660 A18020_Japan_Edo_1 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 13460948 SRR11176630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/030/SRR11176630/SRR11176630_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/030/SRR11176630/SRR11176630_2.fastq.gz f72b137c2dc0b256018d7a5156867dec;a0390060436eb370dce0a1c65a55541c 662327420;775389197 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18018_Japan_Jomon_4 SRA PRJNA608555 SRS6212658 A18018_Japan_Jomon_4 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 8017182 SRR11176632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/032/SRR11176632/SRR11176632_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/032/SRR11176632/SRR11176632_2.fastq.gz d6ba2f81de7080a29462bd03abef822f;71f0e5f9d4813ff20f25cdf62cd15201 363491671;409423805 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18016_Japan_Jomon_2 SRA PRJNA608555 SRS6212656 A18016_Japan_Jomon_2 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 9106996 SRR11176634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/034/SRR11176634/SRR11176634_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/034/SRR11176634/SRR11176634_2.fastq.gz 9c292bd6d6d4f3c8321545968767facf;77d1dd596bb7bbffc63553918595bae5 406949209;459531948 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18033_Japan_Edo_10 SRA PRJNA608555 SRS6212655 A18033_Japan_Edo_10 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 14344364 SRR11176635 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/035/SRR11176635/SRR11176635_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/035/SRR11176635/SRR11176635_2.fastq.gz c84c4a5435f35a5730a3dacec900d338;bedcb449da2bcf88d3f79342f55474ec 766653172;893293180 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18032_Japan_Edo_9 SRA PRJNA608555 SRS6212654 A18032_Japan_Edo_9 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 14788985 SRR11176636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/036/SRR11176636/SRR11176636_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/036/SRR11176636/SRR11176636_2.fastq.gz 28e431435f6c9da7471791a5f87f6d12;31a68e414aa874a71e10a21829ee6f35 729232341;851264876 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18027_Japan_Edo_8 SRA PRJNA608555 SRS6212652 A18027_Japan_Edo_8 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 5349054 SRR11176638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/038/SRR11176638/SRR11176638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/038/SRR11176638/SRR11176638_2.fastq.gz 48a173ff1dc9832b196e71f12fa7b557;14427a8e784f293e4b23fdf7001b52a0 248876272;280102340 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18026_Japan_Edo_7 SRA PRJNA608555 SRS6212651 A18026_Japan_Edo_7 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 15256347 SRR11176639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/039/SRR11176639/SRR11176639_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/039/SRR11176639/SRR11176639_2.fastq.gz 96004934d7b6055e8f5618b303373820;bef884e76a96c2665874edb84fa8a8b2 849341234;1041195299 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18025_Japan_Edo_6 SRA PRJNA608555 SRS6212650 A18025_Japan_Edo_6 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 20949072 SRR11176640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/040/SRR11176640/SRR11176640_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/040/SRR11176640/SRR11176640_2.fastq.gz 559689dc63623d21780cfe3f75022d86;234396626d866e35cfecd741974d590a 1147493145;1392807336 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18024_Japan_Edo_5 SRA PRJNA608555 SRS6212649 A18024_Japan_Edo_5 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 11292668 SRR11176641 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/041/SRR11176641/SRR11176641_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/041/SRR11176641/SRR11176641_2.fastq.gz 08090c3929583fe8ede5a5398c95b598;2c0d83bd6b113d214a4a378f534f1293 752065439;923639274 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 A18015_Japan_Jomon_1 SRA PRJNA608555 SRS6212648 A18015_Japan_Jomon_1 double Platinum Taq DNA-Polymerase High Fidelity none HiSeq X Ten PAIRED WGS 11451382 SRR11176642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/042/SRR11176642/SRR11176642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR111/042/SRR11176642/SRR11176642_2.fastq.gz 35620180c3512f7cea8518161f3787d6;e92e959b61677f01dc03941f84f7ff18 616604877;775312906 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl dentine_lib1 dentine_lib1 double Unknown none unspecified SINGLE WGS NA dentine_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/dentine_lib1.fq.gz 4aad6319a7fe3f696e06b84f809396b8 37909146294 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl dentine_lib2 dentine_lib2 double Unknown none unspecified SINGLE WGS NA dentine_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/dentine_lib2.fq.gz 1e08550125801c3ee185f541e3077a33 4663745319 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl femur_lib1 femur_lib1 double Unknown none unspecified SINGLE WGS NA femur_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/femur_lib1.fq.gz 09a342a277786b89a98c7153f7c6b22e 2865197889 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl new_lib1 new_lib1 double Unknown none unspecified SINGLE WGS NA new_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/new_lib1.fq.gz c0354d39de98dc75553a702c78cfaf4b 160275221 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl new_lib2 new_lib2 double Unknown none unspecified SINGLE WGS NA new_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/new_lib2.fq.gz 4fb1492524d15cf583714e5693b80eff 510850411 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl pulp_lib1 pulp_lib1 double Unknown none unspecified SINGLE WGS NA pulp_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/pulp_lib1.fq.gz 4d105f8ea4f7154428b05cdd6c3a8d43 4467854717 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl whole_root_lib1 whole_root_lib1 double Unknown none unspecified SINGLE WGS NA whole_root_lib1 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/whole_root_lib1.fq.gz 5b325db922d3182f7f5a71607b987199 1186859094 +Zhou2018 2018 10.1016/j.cub.2018.05.058 SK152 UCPH ERDA E56xgi8CEl whole_root_lib2 whole_root_lib2 double Unknown none unspecified SINGLE WGS NA whole_root_lib2 fastq_hostremoved https://sid.erda.dk/share_redirect/E56xgi8CEl/whole_root_lib2.fq.gz 5adca2b3f7e250585826392205f115f6 5524601607 +GuzmanSolis2021 2021 10.7554/eLife.68612 COYC4 Dryad 10.5061/dryad.5x69p8d2s 864574 COYC4.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 1397 COYC4.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864574 bced2b602baa7e9a2b4ebe19c84f3454 334550 +GuzmanSolis2021 2021 10.7554/eLife.68612 HSJN194 Dryad 10.5061/dryad.5x69p8d2s 864575 HSJN194.GQ331046 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 1215 HSJN194.GQ331046 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864575 a30d7d5a7f051b9efe8e2eefb17f111a 284669 +GuzmanSolis2021 2021 10.7554/eLife.68612 HSJN240 Dryad 10.5061/dryad.5x69p8d2s 864576 HSJN240.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 7928 HSJN240.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864576 9478ff3448d3695bcf0a4eac52c8dfe2 1827724 +GuzmanSolis2021 2021 10.7554/eLife.68612 HSJNC81 Dryad 10.5061/dryad.5x69p8d2s 864577 HSJNC81.AB550331 double Phusion U Hot Start DNA none NextSeq 550 PAIRED Targeted-Capture 25536 HSJNC81.AB550331 fastq_mapped https://datadryad.org/stash/downloads/file_stream/864577 28f7ac3a41cf27265ad58bbb943f233c 6432414 +Namouchi2018 2018 10.1073/pnas.1812865115 BSS31 ENA PRJEB24499 ERS2865269 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 54518592 ERR2862153 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/003/ERR2862153/ERR2862153_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/003/ERR2862153/ERR2862153_2.fastq.gz f36edddd83739b18d00562376f27eb16;2e317b38db5e7bb5a32b9ff22021f0b3 2768446734;2889325922 +Namouchi2018 2018 10.1073/pnas.1812865115 SLC1006 ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 203877595 ERR2862150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_2.fastq.gz a6112d04b304b2375dae6c34033bbc16;acafcc79f3d021db8f3308d9ac935bcf 11059312752;11017819383 +Namouchi2018 2018 10.1073/pnas.1812865115 SLC1006 ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 221791489 ERR2862151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_2.fastq.gz f80f8e1d0712e6c0f2a65e79acc67ba3;190cc46629e5eda6fef664d6cb80ee3d 11578595157;11538874156 +Namouchi2018 2018 10.1073/pnas.1812865115 OSL1 ENA PRJEB24499 ERS2865270 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 40003541 ERR2862148 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/008/ERR2862148/ERR2862148_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/008/ERR2862148/ERR2862148_2.fastq.gz 41283d9b2f686b7f8a046e1c96b34bdb;a53312032dfc64e719e3be7263351e47 2161454525;2250278255 +Namouchi2018 2018 10.1073/pnas.1812865115 OSL1 ENA PRJEB24499 ERS2865270 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 185270186 ERR2862149 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/009/ERR2862149/ERR2862149_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/009/ERR2862149/ERR2862149_2.fastq.gz 8bb91f4a47371d605a6e5c6a8dd14728;4c5264643c3b180902778e99c48a6cb6 10098942815;10702895807 +Namouchi2018 2018 10.1073/pnas.1812865115 Ber45 ENA PRJEB24499 ERS2865268 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 222117414 ERR2862147 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/007/ERR2862147/ERR2862147_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/007/ERR2862147/ERR2862147_2.fastq.gz fc67a9eb81749af90752cd998025bf75;575f66d2c19c73797e829c8b2cf1245a 11273955083;11260577539 +Namouchi2018 2018 10.1073/pnas.1812865115 Ber37 ENA PRJEB24499 ERS2865267 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 61657375 ERR2862146 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/006/ERR2862146/ERR2862146_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/006/ERR2862146/ERR2862146_2.fastq.gz 30e2676bebf58be0ee28c1fb0c5d1a0c;deaf3af1e3bb8efb11ade6571f99db64 3045935914;3190429031 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22885856 ERR4000686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000686/ERR4000686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000686/ERR4000686_2.fastq.gz b761b2c14dc8105926b7191241b7bca0;52cc8cf21f54204a16fa8a5eb1b2b388 903939528;959368702 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3060071 ERR4000687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000687/ERR4000687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000687/ERR4000687_2.fastq.gz 00ac30dd567beb5768f3ab459e094779;56bb75bac71e27617fd12fa17549cda5 141446644;144607639 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2845127 ERR4000688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000688/ERR4000688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000688/ERR4000688_2.fastq.gz 863ac8d474747be2f26fd05f7b6e5c92;298c306fcfc68c809bc4e21052714fbd 130674021;133597567 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3090361 ERR4000689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000689/ERR4000689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000689/ERR4000689_2.fastq.gz 41b85464025aad3854d68c50954d3178;1d92569f385d1c1aceae19dc2f062815 142248765;147778445 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398261 AGU007.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3001848 ERR4000690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000690/ERR4000690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000690/ERR4000690_2.fastq.gz 5a67c2c409e3c0d7d858044bf15bac2e;ab7111da19e1ecfb0f41f65f6030aae8 138790891;144181598 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3144286 ERR4000691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/001/ERR4000691/ERR4000691_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/001/ERR4000691/ERR4000691_2.fastq.gz 07e1e801dd06cbea17db024eee1b5ebb;bd1d86c678977bcab81e1a8b98604dcb 144910502;147731992 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2933372 ERR4000692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/002/ERR4000692/ERR4000692_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/002/ERR4000692/ERR4000692_2.fastq.gz c31075d8fc9dd701919afa16b7cb5ac9;89416696b8565f3e9551a8e678191c62 134241540;136926614 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3189566 ERR4000693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/003/ERR4000693/ERR4000693_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/003/ERR4000693/ERR4000693_2.fastq.gz d08c73ba61597290601a32d21390359a;713fde2e0f4d22a1a9d42f419b0aeda2 146532910;151772674 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU010 ENA PRJEB37508 ERS4410876 AGU010.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3095357 ERR4000694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/004/ERR4000694/ERR4000694_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/004/ERR4000694/ERR4000694_2.fastq.gz d9e3e951d9fe85bc500873d28b2f1ea9;b3f5eb89170419c6294a67aab7da4bd5 142893406;148019854 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU020 ENA PRJEB37508 ERS4398262 AGU020.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3843987 ERR4000695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000695/ERR4000695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000695/ERR4000695_2.fastq.gz e204206e1308bc6eef10c2c198eeece2;cb9f0b504f184ccdddbf548e9513bf28 124732417;133856024 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU020 ENA PRJEB37508 ERS4398262 AGU020.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3286933 ERR4000696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000696/ERR4000696_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/006/ERR4000696/ERR4000696_2.fastq.gz be6f86deace194cbdcc95c44855cee7c;b92f11a35670415ec6f2987d8616d9df 107235347;115948150 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3009182 ERR4000697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000697/ERR4000697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/007/ERR4000697/ERR4000697_2.fastq.gz cfe924ca1d6f93a2d4ea7c27776f3d60;fb1dfc49b953c42448dd38797cb0f4ee 138974546;142332055 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2802868 ERR4000698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000698/ERR4000698_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/008/ERR4000698/ERR4000698_2.fastq.gz e9105b295a7fe8f923e4254cad17b9a7;291025c02f4051d30eae51cdce5f7f7f 128476539;131512034 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 3041178 ERR4000699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000699/ERR4000699_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/009/ERR4000699/ERR4000699_2.fastq.gz 896f968073a75037fd5951a4afb9a9de;635ddf4c79217bec3814d6565c5eda4c 139986140;145677594 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU025 ENA PRJEB37508 ERS4398263 AGU025.B0102.YP1.2 double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2957434 ERR4000700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000700/ERR4000700_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/000/ERR4000700/ERR4000700_2.fastq.gz a0abcfe156c99b0701fcade7d1c58e8b;376a1d47ced8bf06bb4bf26ace26c9c2 136765755;142283105 +Giffin2020 2020 10.1038/s41598-020-66012-x AGU007 ENA PRJEB37508 ERS4398260 AGU007.A0102.TP2.1 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20506151 ERR4000685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000685/ERR4000685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR400/005/ERR4000685/ERR4000685_2.fastq.gz a2861438793d9a4b94a9100ad0dc2354;09e2e34e6bc2b68d24d0522f2c49eb1f 850624514;925250575 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM83 SRA PRJNA730407 SRS9000656 XBQM83_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 14549039 SRR14565211 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/011/SRR14565211/SRR14565211_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/011/SRR14565211/SRR14565211_2.fastq.gz b6bd276c572f7deb52fb927f09c9c9df;9d949477cc70dec4ecf47365a0d9646b 951359310;908915820 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM83 SRA PRJNA730407 SRS9000653 XBQM83_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 64016080 SRR14565212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/012/SRR14565212/SRR14565212_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/012/SRR14565212/SRR14565212_2.fastq.gz 217eb4ce24c1b809827be09d056ca523;a511d66a5cbe5ec666a3cf155fd23a6e 4639284556;4662834484 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM11 SRA PRJNA730407 SRS9000654 XBQM11_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 16815096 SRR14565213 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/013/SRR14565213/SRR14565213_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/013/SRR14565213/SRR14565213_2.fastq.gz f8a84396cd0a29d5750bbcc0d4e6ed25;0e217afcad8f23002d654ffe10983747 1098450781;1098816816 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM11 SRA PRJNA730407 SRS9000655 XBQM11_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 9311745 SRR14565214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/014/SRR14565214/SRR14565214_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/014/SRR14565214/SRR14565214_2.fastq.gz ab013f34350b95e60155de1618cd486e;6bd3949829f9c9502b5d98a04d5a7878 660607550;654762621 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM7 SRA PRJNA730407 SRS9000651 XBQM7_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 13824752 SRR14565215 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/015/SRR14565215/SRR14565215_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/015/SRR14565215/SRR14565215_2.fastq.gz 77cec9ca56524f021b18c6a513b6c7da;05ce15d031818d49dac4a95adf51047f 903370747;895710707 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM7 SRA PRJNA730407 SRS9000652 XBQM7_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 69268460 SRR14565216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/016/SRR14565216/SRR14565216_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/016/SRR14565216/SRR14565216_2.fastq.gz a8d0657bddb8f901ea3748ecbb9cede0;6feed0c285ba0b7ac370c998e892d1c8 5235871812;5459600628 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM90 SRA PRJNA730407 SRS9000650 XBQM90_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 25388703 SRR14565217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/017/SRR14565217/SRR14565217_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/017/SRR14565217/SRR14565217_2.fastq.gz a3a200693b96295951f9ced6eb071f3a;eb825715d9c61bb2f52838973297611f 1712233814;1710476566 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM90 SRA PRJNA730407 SRS9000648 XBQM90_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 63328125 SRR14565218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/018/SRR14565218/SRR14565218_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/018/SRR14565218/SRR14565218_2.fastq.gz fcea3925b978263a041330466ae4f9f8;4655ede3e13e0011050a4a11d09321ad 4243106558;4217903097 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM64 SRA PRJNA730407 SRS9000649 XBQM64_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 15172493 SRR14565219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/019/SRR14565219/SRR14565219_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/019/SRR14565219/SRR14565219_2.fastq.gz 1cc92a85227084da00f67d4883f5c417;5bc2b90d8d5e5318b2437691990a8c11 1041039188;1115465118 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM64 SRA PRJNA730407 SRS9000647 XBQM64_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 19590596 SRR14565220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/020/SRR14565220/SRR14565220_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/020/SRR14565220/SRR14565220_2.fastq.gz fb5726b5f57eddc174c86924d04b7314;0ed1afd6db8f74f4607a688e1625fa15 1294841802;1270489220 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM20 SRA PRJNA730407 SRS9000646 XBQM20_NonUDG double Q5 High-Fidelity DNA none HiSeq X Ten PAIRED Targeted-Capture 29095860 SRR14565221 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/021/SRR14565221/SRR14565221_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/021/SRR14565221/SRR14565221_2.fastq.gz aac99cfe6f22250aea5faf0fa93ae688;d64864088c980891729b1040c74e6169 1895927673;1867829467 +Wu2021 2021 10.1371/journal.ppat.1009886 XBQM20 SRA PRJNA730407 SRS9000645 XBQM20_UDG double Q5 High-Fidelity DNA full-udg HiSeq X Ten PAIRED Targeted-Capture 54881279 SRR14565222 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/022/SRR14565222/SRR14565222_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR145/022/SRR14565222/SRR14565222_2.fastq.gz 9798d971880d9ac36309812f439c805b;775e797e41249aa7db50260f8caca7df 3532466872;3372737972 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 18128930 ERR5354929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354929/ERR5354929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354929/ERR5354929_2.fastq.gz 6723e5963cf3e566464a89eee2673a87;754ae1adc2b44a0048c0976748fc3b3c 616541849;746635527 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12727342 ERR5354930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5354930/ERR5354930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5354930/ERR5354930_2.fastq.gz df93929b1354aa05cfbef70b6c3134e4;bb3a1cbc8e2f9db73b67b5d9da8c1eff 415782367;501384365 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina MiniSeq PAIRED WGS 139312 ERR5354966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5354966/ERR5354966_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5354966/ERR5354966_2.fastq.gz 690c46c13471abaaeee2f50d91961b59;1ea84692b19c350a8dbeea9a25f7b01e 3362749;3454741 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 7357358 ERR5354967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5354967/ERR5354967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5354967/ERR5354967_2.fastq.gz 7712c7e52a699ad6b0b8d4219cda5018;8f0854688b386b2d7d419b9b4baf1d39 246285309;302024827 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina MiniSeq PAIRED WGS 52166 ERR5354968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5354968/ERR5354968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5354968/ERR5354968_2.fastq.gz a471165abdd6ec69779dfd35460d38dd;5c9659932b13735d0a55eccb014c3850 1170989;1245684 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 6567554 ERR5354969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354969/ERR5354969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354969/ERR5354969_2.fastq.gz 2ce2643dd0aa1e11c6b7e177e18b0268;62f52c94b612eaa251478ee18f18f2a6 224093508;269050193 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 91093746 ERR5354999 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5354999/ERR5354999.fastq.gz 8a73938c41df3ddd963e30bcb45cd469 4086127948 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR11 ENA PRJEB43291 ERS5823072 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 66607702 ERR5355000 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/000/ERR5355000/ERR5355000.fastq.gz 781d4a90ef7f018dc6fc28c60ce94ad8 2787431584 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina MiniSeq SINGLE WGS 594022 ERR5355036 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/006/ERR5355036/ERR5355036.fastq.gz fd0698188a4202d32105575f04998cd5 22313113 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L1 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 71560003 ERR5355037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/007/ERR5355037/ERR5355037.fastq.gz 78e038f528a501cba04e3450cc4dda26 2732657638 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina MiniSeq SINGLE WGS 209607 ERR5355038 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/008/ERR5355038/ERR5355038.fastq.gz 2d9715d0fcf53d330d2b6dcd8f427235 7822473 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 LAR8 ENA PRJEB43291 ERS5823096 L2 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 52561225 ERR5355039 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR535/009/ERR5355039/ERR5355039.fastq.gz c55a07e76fa6879e2afba5503a1e64d3 2041453601 +Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE387 GenBank PRJEB25584 LT992447 RISE387 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992447.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992447.1 7caa93249501bd21c45496a1cbb14a9f 3374 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA195 GenBank PRJEB25584 LT992441 DA195 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992441.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992441.1 986e00023fe60e2748e57305ea5b0023 3372 +Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE563 GenBank PRJEB25584 LT992443 RISE563 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992443.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992443.1 acc6a806d2b2a501809221cd0f70012d 3341 +Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE254 GenBank PRJEB25584 LT992459 RISE254 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992459.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992459.1 44b9a94446baa1a1fae23441d547a2cf 3341 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA29 GenBank PRJEB25584 LT992438 DA29 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992438.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992438.1 c871d0ed0f29deb084b1c848721cd758 3338 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA27 GenBank PRJEB25584 LT992439 DA27 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992439.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992439.1 76d0e7b583614fcf1e837b4930a06ae3 3338 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA119 GenBank PRJEB25584 LT992440 DA119 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992440.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992440.1 79274dee021559cbd2fd40b067b393ef 3378 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA45 GenBank PRJEB25584 LT992442 DA45 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992442.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992442.1 ff8b800b99abd74e9673116ae6518742 3371 +Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE154 GenBank PRJEB25584 LT992455 RISE154 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992455.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992455.1 27b11133502f2fbea6e82131345e9f66 3363 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA51 GenBank PRJEB25584 LT992444 DA51 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992444.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992444.1 d5d71252e0970cc0b2b1cb32ab4e2fc3 3338 +Muhlemann2018 2018 10.1038/s41586-018-0097-z RISE386 GenBank PRJEB25584 LT992448 RISE386 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992448.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992448.1 71a21ca87809ab1ba033300c4a7ffa55 3374 +Muhlemann2018 2018 10.1038/s41586-018-0097-z DA222 GenBank PRJEB25584 LT992454 DA222 double Unknown none Illumina HiSeq 2500 SINGLE Targeted-Capture NA LT992454.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/LT992454.1 df1dfaf15c22d263bd9f48246d3f6ae8 3339 +BarGal2012 2012 10.1002/hep.25852 Yangju child mummy GenBank Unknown JN315779 unspecified double Unknown none unspecified SINGLE Unknown NA JN315779.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/JN315779.1 0f9e5d114e839270583de1a9ead66260 3342 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb4 SRA PRJNA646369 SRS7008173 Herb4 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4430641 SRR12224798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/098/SRR12224798/SRR12224798.fastq.gz 349af60c1d39bb6680c62c82b7af1968 170617155 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb5 SRA PRJNA646369 SRS7008179 Herb5 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4088135 SRR12224792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/092/SRR12224792/SRR12224792.fastq.gz f7d87e394ad365054ccfa8a828b25c0a 166304371 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Herb9 SRA PRJNA646369 SRS7008183 Herb9 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 4164522 SRR12224788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/088/SRR12224788/SRR12224788.fastq.gz ceea464aa9541cdd584bf3ebdc36275f 169510392 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK003 SRA PRJNA646369 SRS7008154 MK003 double AmpliTaq Gold DNA none unspecified SINGLE WGS 40098604 SRR12224817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/017/SRR12224817/SRR12224817.fastq.gz b9ea0dbc3777267d9caacf08aeb1497c 1391910082 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK011 SRA PRJNA646369 SRS7008163 MK011 double AmpliTaq Gold DNA none unspecified SINGLE WGS 36843352 SRR12224808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/008/SRR12224808/SRR12224808.fastq.gz 3c87c37037a37fb420ea7d97355a9fe7 1279887629 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK012 SRA PRJNA646369 SRS7008164 MK012 double AmpliTaq Gold DNA none unspecified SINGLE WGS 20856691 SRR12224807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/007/SRR12224807/SRR12224807.fastq.gz f45f82be8a5ac46bdb1a3b76caad7c80 779043612 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK014 SRA PRJNA646369 SRS7008166 MK014 double AmpliTaq Gold DNA none unspecified SINGLE WGS 13382520 SRR12224805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/005/SRR12224805/SRR12224805.fastq.gz a63a992d0cf94c97dd00039ccdb98f09 502055195 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK015 SRA PRJNA646369 SRS7008167 MK015 double AmpliTaq Gold DNA none unspecified SINGLE WGS 26349087 SRR12224804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/004/SRR12224804/SRR12224804.fastq.gz 1bd625eaef0397a0e44dcf1d3dbe0b40 929439153 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK016 SRA PRJNA646369 SRS7008168 MK016 double AmpliTaq Gold DNA none unspecified SINGLE WGS 19087704 SRR12224803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/003/SRR12224803/SRR12224803.fastq.gz 4b4e58f9fb4aa7f28ed573ece4428acf 686766302 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK017 SRA PRJNA646369 SRS7008169 MK017 double AmpliTaq Gold DNA none unspecified SINGLE WGS 27771155 SRR12224802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/002/SRR12224802/SRR12224802.fastq.gz f5c5b70320eda0e279b2cac8e31f36a8 999627110 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK019 SRA PRJNA646369 SRS7008171 MK019 double AmpliTaq Gold DNA none unspecified SINGLE WGS 23935870 SRR12224800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/000/SRR12224800/SRR12224800.fastq.gz e2f46439990673cca8e3f481bdf3ee22 857004771 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK020 SRA PRJNA646369 SRS7008172 MK020 double AmpliTaq Gold DNA none unspecified SINGLE WGS 28559669 SRR12224799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/099/SRR12224799/SRR12224799.fastq.gz 964d2fb8032bca2871a9a98928774420 1045759253 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK023 SRA PRJNA646369 SRS7008175 MK023 double AmpliTaq Gold DNA none unspecified SINGLE WGS 15043930 SRR12224796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/096/SRR12224796/SRR12224796.fastq.gz bbfe0ae4791a5d25f065db5377bcb85a 561055390 +Danneels2021 2021 10.1016/j.cub.2021.03.049 MK025 SRA PRJNA646369 SRS7008177 MK025 double AmpliTaq Gold DNA none unspecified SINGLE WGS 22600558 SRR12224794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR122/094/SRR12224794/SRR12224794.fastq.gz 45a9346eee8f693e8a8f579911a7a12c 797445194 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208309.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208309.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208309.1 7f7425a5a99c0fa48947dc74cc38c7e1 2434 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208310.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208310.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208310.1 befbf7de2173e509775a25e6b81b20a9 2428 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown DQ208311.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA DQ208311.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/DQ208311.1 3503da7d8fdd8b0a5973147c2ffcbd89 2301 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF116575.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF116575.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF116575.1 8e0e87fadeb8f0d2b5623c645b425009 1352 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AY744935.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AY744935.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AY744935.1 3970e212eb8b492f9f045c71f0c3f7a0 1636 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF250356.2 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF250356.2 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF250356.2 d9f855cb3f051e4458049c46ad77cae0 1546 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AY130766.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AY130766.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AY130766.1 c66636db2e0f9adc34291650a366e831 1133 +Taubenberger2005 2005 10.1038/nature04230 A/Brevig Mission/1/1918(H1N1) GenBank Unknown AF333238.1 unspecified unknown Unknown none unspecified SINGLE Unknown NA AF333238.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/AF333238.1 6b80207549ec72324985e87491e2ea5f 1002 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 SK11 SRA PRJNA417381 SRS2667046 SK11 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 932681 SRR6263250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/000/SRR6263250/SRR6263250_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/000/SRR6263250/SRR6263250_2.fastq.gz 68afc6b7f233bd9345c583f78de68458;0268c08ff7d782b6f22ec59a85f5eee4 68170556;60168167 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 SK11 SRA PRJNA417381 SRS2667046 SK11_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 870237 SRR6263256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/006/SRR6263256/SRR6263256.fastq.gz 1c02d530a9aea2173b8d11f3a11fa295 29299247 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 T18 SRA PRJNA417381 SRS2667044 T18 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 923820 SRR6263251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/001/SRR6263251/SRR6263251_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/001/SRR6263251/SRR6263251_2.fastq.gz 4fc9ab23fc065e3f8419f6fe3c9353a0;9a4a1c4b8d838d5349509d5f01c763b6 69712147;64085918 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 T18 SRA PRJNA417381 SRS2667044 T18_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 799283 SRR6263257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/007/SRR6263257/SRR6263257.fastq.gz 72c7e90c18f9d282e648ee3003e7c771 27296727 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Body 188 SRA PRJNA417381 SRS2667047 Body188 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 38370698 SRR6263249 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/009/SRR6263249/SRR6263249_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/009/SRR6263249/SRR6263249_2.fastq.gz f43f55ed4b4dce646ba5527bd980381a;db892bda8736fa457d27eafa01929869 2891352307;2620341921 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Body 188 SRA PRJNA417381 SRS2667047 Body188_resequencing double AmpliTaq Gold DNA unknown unspecified SINGLE Targeted-Capture 35172757 SRR6263255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/005/SRR6263255/SRR6263255.fastq.gz 78aa02f8f124373ce030ddf21a03eca7 1257325015 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_1 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 32941086 SRR6263252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/002/SRR6263252/SRR6263252_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/002/SRR6263252/SRR6263252_2.fastq.gz cd0ceae3960e977b57250d413a2acd45;474a5c1a04c9f1f23e4452a638ce1fe8 2415048428;2509014319 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_2 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 51410154 SRR6263253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/003/SRR6263253/SRR6263253_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/003/SRR6263253/SRR6263253_2.fastq.gz e01e8e595180db68811ff214cbb7f341;f48cbf2293abe34f35a7c44c42356965 3864535768;3776741536 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 GC96 SRA PRJNA417381 SRS2667045 GC96_3 double AmpliTaq Gold DNA unknown unspecified PAIRED Targeted-Capture 7268389 SRR6263254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/004/SRR6263254/SRR6263254_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR626/004/SRR6263254/SRR6263254_2.fastq.gz bd88cc13294dfcf0e9da8e52b43bf6e0;bb6cf2349340aad4f492efff25b25127 704754734;607683648 +Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942272 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 20871329 ERR1094784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094784/ERR1094784_2.fastq.gz a0a27714cf273c2af218ae7e84cb765a;42068f47a62ae52ef2d94fcdea1173d4 1734887058;1769681767 +Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942281 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 60954954 ERR1094793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/003/ERR1094793/ERR1094793_2.fastq.gz d195918dc21bd80fcbcf5e3055c9e1eb;efd29499b049aaaa338b81fc95ca9965 5116924426;5280303595 +Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942282 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 63743693 ERR1094794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/004/ERR1094794/ERR1094794_2.fastq.gz e66f62757a607246c7b69add6d8bf543;b1ddb80eac2e76489f86883b945f85a6 5352278174;5537792499 +Lugli2017 2017 10.1186/s40168-016-0221-y Iceman Intestine (B0621,C1824,C1825,B0625) ENA PRJEB11511 ERS942276 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 33452784 ERR1094788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094788/ERR1094788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR109/008/ERR1094788/ERR1094788_2.fastq.gz 4ef9983030d265f96f770aac240b16e4;3f678c48d82e637ef5dc64603337ccb2 2805332116;2813277772 +Schuenemann2011 2011 10.1073/pnas.1105107108 ES 1-5 GenBank Unknown HE576987 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina Genome Analyzer IIx SINGLE Targeted-Capture NA HE576986.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/HE576986.1 a471f7422782c8f822585ba2882425e6 1461 +PattersonRoss2018 2018 10.1371/journal.ppat.1006750 NASD24 GenBank Unknown MG585269 LM1 double Unknown none Illumina HiSeq 1500 PAIRED Targeted-Capture NA MG585269.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/MG585269.1 dd915f2e6514598ce1512406f54ed84e 3314 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 37860526 ERR2570893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570893/ERR2570893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570893/ERR2570893_2.fastq.gz fe24702a3a31d9503081dc3332311b6f;00ca6e5ad01f4d0c9de87ec4fafaf6e9 2707281650;2506718803 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 35924761 ERR2570894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570894/ERR2570894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570894/ERR2570894_2.fastq.gz 044a82f8dcbe86fdc0b40747b9996592;b3f02f47ad84fc162644ffb8d44f2413 2454813540;2429692257 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168U double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 32893331 ERR2570895 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570895/ERR2570895_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570895/ERR2570895_2.fastq.gz d8eddef8a75e69c09e681183dc980f8b;ece99d98de9f346ed3432dd36c507532 2323725686;2310827969 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12654810 ERR2570896 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570896/ERR2570896_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570896/ERR2570896_2.fastq.gz dbb1c2463207c412cdd8777b91ab2276;c1e6f3199e2e5471fade906083b6b8ad 523906635;600245609 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11958869 ERR2570897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570897/ERR2570897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570897/ERR2570897_2.fastq.gz 511688417572c894957c735fa979cc39;f99cc3bccb2603d18bc20bbf58858e62 495183145;574717274 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12316322 ERR2570898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570898/ERR2570898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570898/ERR2570898_2.fastq.gz a3ba46a634c766ee08ebb7b3bbc173d9;f951e17a1a15dd856beb330e046c80d9 517246160;591977836 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11887488 ERR2570899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570899/ERR2570899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570899/ERR2570899_2.fastq.gz 22e612ee7b3de185fbdda88604b2d1bc;4fd030d802c572a92d1042f664534a45 496531587;575478945 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 21439776 ERR2570900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570900/ERR2570900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570900/ERR2570900_2.fastq.gz 5101240c04d824be255ffcdff4e851ad;dfe9af3aa0a652e830beaa699304dba4 903450834;1024907077 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 20815771 ERR2570901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570901/ERR2570901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570901/ERR2570901_2.fastq.gz 85620bedab1b71c08b42494c7978d153;5451c9142bab47801b0d84bd5c35261a 877430007;1008398277 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 21032362 ERR2570902 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570902/ERR2570902_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570902/ERR2570902_2.fastq.gz 273417f980b948511f8088705af9f663;1375696481266f1ff6501722e7746d1d 899548041;1018525770 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 20556954 ERR2570903 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570903/ERR2570903_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570903/ERR2570903_2.fastq.gz 977a623036fd4a6d426e25bf0b113ff5;b8202619b9ceaeb47a56b0febd3e607c 875152312;1002987453 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12910492 ERR2570904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570904/ERR2570904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570904/ERR2570904_2.fastq.gz f365b4c693f2aa93421ae5be050ef0ed;7d81c9df2d6dabf8bb9060ae829c3b54 540264717;619499900 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12385163 ERR2570905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570905/ERR2570905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570905/ERR2570905_2.fastq.gz 028d3c79cb175781e868f9ef104395f9;af3d7ed2e8369664b8e4634d9dd388cd 520056036;602138520 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12498680 ERR2570906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570906/ERR2570906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570906/ERR2570906_2.fastq.gz 2ef341033cff59c76713893e27f3ea66;45e04521445c06e434555f20915be21a 529734232;607493467 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94A ENA PRJEB21276 ERS2470993 JK3167E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12184135 ERR2570907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570907/ERR2570907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570907/ERR2570907_2.fastq.gz e67029b4dd4777f262d43c2645f266f2;d37441aea9ccfaeefbc434e04e8ce54e 515363207;597161718 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7230268 ERR2570908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570908/ERR2570908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570908/ERR2570908_2.fastq.gz cb9bc95f2cc6438f7bfe1fb4b158ab6b;e01a89ea15af1c6b927cd94e653c343c 303220388;345932301 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6817880 ERR2570909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570909/ERR2570909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570909/ERR2570909_2.fastq.gz 26f4b654a6b90fbd59f1971fd5a5de37;1b10f2a549e97235064563e2c7856f83 286744000;329979577 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7145679 ERR2570910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570910/ERR2570910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570910/ERR2570910_2.fastq.gz 22f725683b378519aa7cc167f67c3418;329233049927b45f4663e8279d5a446b 304763925;346372513 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6783520 ERR2570911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570911/ERR2570911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570911/ERR2570911_2.fastq.gz ee8c4220a62fa5759cc0367c91355bae;07353479419ffe903d1806b4708fb3de 289043249;331303302 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7303573 ERR2570912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570912/ERR2570912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570912/ERR2570912_2.fastq.gz b90e8f406c6fb602e393fda94083e312;27803a06b00ae9fd77f41996a71073b2 306921950;351129483 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6756556 ERR2570913 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570913/ERR2570913_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570913/ERR2570913_2.fastq.gz 9f348d5ee46a907453ec9961f150fd4a;b4582109285e44bca557ae668517dd82 284378618;329029977 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 7186967 ERR2570914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570914/ERR2570914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570914/ERR2570914_2.fastq.gz e50c337cc27480f28651f552614056c2;b4b4360a5fe095b3de5b29ea1ee9fc29 306738045;349675666 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 6791339 ERR2570915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570915/ERR2570915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570915/ERR2570915_2.fastq.gz a8b083ef1123936f9ef083927200e8ad;4ce4834af5638adc81aaa0ee6d30de19 289455817;333219560 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11550313 ERR2570916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570916/ERR2570916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570916/ERR2570916_2.fastq.gz 28e6312acaa41b68d33a28beda876db9;9a7008690d3bd0974e6f213862e5f62c 484099589;553094244 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11135128 ERR2570917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570917/ERR2570917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570917/ERR2570917_2.fastq.gz 08796fb156ceefe08eaf581b3e2cb319;4ede870dad58b4e6ff419e83affe63cd 466878031;538400712 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 11350615 ERR2570918 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570918/ERR2570918_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570918/ERR2570918_2.fastq.gz 004575230fecf7f5dd7791e4acd40fcd;51e98969e7b36172d2b5ffda2ceb906e 482762643;550746595 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 133 ENA PRJEB21276 ERS2470995 JK3168E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 10950921 ERR2570919 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570919/ERR2570919_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570919/ERR2570919_2.fastq.gz 94e2761c729790c91cbb252af398b80f;92610efa686172bcfb2e6a240cca1efc 464486018;534041169 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 17520079 ERR2570920 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570920/ERR2570920_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570920/ERR2570920_2.fastq.gz b4b76e15f6d489618a99ae0f99b20992;1b6dfa95bbc58353d8a0bf087a80a219 735655315;834878948 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 16673183 ERR2570921 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570921/ERR2570921_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570921/ERR2570921_2.fastq.gz 7555d3354475746f51c41c278d71d772;8856def9a9a41c433b79d62fa7260707 698103901;804297916 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 17318097 ERR2570922 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570922/ERR2570922_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/002/ERR2570922/ERR2570922_2.fastq.gz 32136d3700292f2fcd0788623722b88c;acb475050ce41c193ae8222765557c32 738584777;835859549 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E1L3 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 16615782 ERR2570923 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570923/ERR2570923_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/003/ERR2570923/ERR2570923_2.fastq.gz b9c1fad39cd87ae6c860561a90b7cbe3;9ceab94ce7e2cebd94854ec627ae9d30 704695874;808588130 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 28505361 ERR2570924 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570924/ERR2570924_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/004/ERR2570924/ERR2570924_2.fastq.gz 1a37ca29c99afab4e4eafcf8d227730d;34f5a16e12bc7aebf78b75d36f9956dc 1190287178;1361585729 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 27285888 ERR2570925 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570925/ERR2570925_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/005/ERR2570925/ERR2570925_2.fastq.gz cbfb1bbce9d992dece2edaa47d07b13e;32d30aa2be8016db1fdf5ed5b68147b2 1140426021;1320430592 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 28195675 ERR2570926 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570926/ERR2570926_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/006/ERR2570926/ERR2570926_2.fastq.gz 9a7e520ac19de4427bd6092df9d8b32a;b3babed3e103adcd370b0058150647b1 1194566162;1365530607 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L1 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 27398108 ERR2570927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570927/ERR2570927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/007/ERR2570927/ERR2570927_2.fastq.gz f4b3264c53c63ec6d93aca2cc3db8ced;c7aac52215e932ebd5940297a753faa3 1154087012;1336926417 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 13408535 ERR2570928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570928/ERR2570928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/008/ERR2570928/ERR2570928_2.fastq.gz 48ced0fea1465e94b54a9a2437270a69;1c609a0e9634eb386d83105cb6ef4430 565362957;646553913 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12900259 ERR2570929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570929/ERR2570929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/009/ERR2570929/ERR2570929_2.fastq.gz f6c687edb5ce72c7b14cfda855f4f8cf;cacce5886ad88004bd4bcba1014d5d94 544920815;630813416 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 13254636 ERR2570930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570930/ERR2570930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/000/ERR2570930/ERR2570930_2.fastq.gz 6576c8d16a4c2f82b60330564fc0472d;bfe7f6b9c94c7e66dfc55fc192e601fc 566481579;647103850 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 94B ENA PRJEB21276 ERS2470994 JK3170E2L2 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 PAIRED Targeted-Capture 12850208 ERR2570931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570931/ERR2570931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR257/001/ERR2570931/ERR2570931_2.fastq.gz be2c8c9e7daf214c6bc4e54f6982907b;01085d242140169792182aa43a13354d 547170370;632884615 +Worobey2016 2016 10.1038/nature19827 SF20 GenBank Unknown KJ704794 SF20 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704794.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704794.1 138abbc5a7a35686b493939e2d27cfca 8725 +Worobey2016 2016 10.1038/nature19827 NYC7 GenBank Unknown KJ704791 NYC7 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704791.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704791.1 3e4d73069a9dde19517519a781b1e6a4 8780 +Worobey2016 2016 10.1038/nature19827 NYC16 GenBank Unknown KJ704790 NYC16 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704790.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704790.1 1bd39dae86e4206bb7dc517565828e6f 8714 +Worobey2016 2016 10.1038/nature19827 NYC12 GenBank Unknown KJ704789 NYC12 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704789.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704789.1 c36627e2be31f5f8913727ceaf6c7581 8706 +Worobey2016 2016 10.1038/nature19827 NYC4 GenBank Unknown KJ704792 NYC4 unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704792.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704792.1 3fb180ffef0451437cec23d1a7a41b1f 8730 +Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704787 PatientOpbMc unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704787.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704787.1 109a8e3388ae516e61fbe81025aba58f 8855 +Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704788 PatientO unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704788.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704788.1 c9bed36585f4d00cdeac3340728f51f2 7490 +Worobey2016 2016 10.1038/nature19827 Patient0 (PZconservative040513) GenBank Unknown KJ704797 PatientO unknown Unknown unknown AB 3730xL Genetic Analyzer SINGLE Unknown NA KJ704797.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/KJ704797.1 341b8306332761befecda58427accd07 8852 +Muhlemann2018b 2018 10.1073/pnas.1804921115 DA251 GitHub acorg/parvo-2018 DA251 DA251 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2500 SINGLE Targeted-Capture NA DA251-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA251-combined.fasta 21f7096675e71e2f81cc9cf81de2af19 112619 +Muhlemann2018b 2018 10.1073/pnas.1804921115 DA336 GitHub acorg/parvo-2018 DA336 DA336 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA336-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA336-combined.fasta 1c9ce3c1c88d4a37fab4ac22ca39adbf 129424 +Muhlemann2018b 2018 10.1073/pnas.1804921115 DA337 GitHub acorg/parvo-2018 DA337 DA337 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA337-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA337-combined.fasta c2707fc958c7483d3879e85ec834b577 636493 +Muhlemann2018b 2018 10.1073/pnas.1804921115 DA66 GitHub acorg/parvo-2018 DA66 DA66 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA DA66-combined-unique fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/DA66-combined-unique.fasta 4cbadd0cd45f4a900ceefeee8f4d0344 119199 +Muhlemann2018b 2018 10.1073/pnas.1804921115 NEO105 GitHub acorg/parvo-2018 NEO105 NEO105 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA NEO105-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/NEO105-combined.fasta e22a15caab9a4aa5a4da17b509d431a4 543830 +Muhlemann2018b 2018 10.1073/pnas.1804921115 RISE569 GitHub acorg/parvo-2018 RISE569 RISE569 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA RISE569-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/RISE569-combined.fasta 1ce8487a9481ec7d909eda18f00ed373 564234 +Muhlemann2018b 2018 10.1073/pnas.1804921115 VK143 GitHub acorg/parvo-2018 VK143 VK143 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK143-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK143-combined.fasta c1bbb0a3d99207a76f9ed210637c6074 213067 +Muhlemann2018b 2018 10.1073/pnas.1804921115 VK154 GitHub acorg/parvo-2018 VK154 VK154 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK154-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK154-combined.fasta d305c6ab14b58a5cac78311378cc2994 280817 +Muhlemann2018b 2018 10.1073/pnas.1804921115 VK477 GitHub acorg/parvo-2018 VK477 VK477 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK477-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK477-combined.fasta 847d8acbf85793026b8f241d27693c32 610366 +Muhlemann2018b 2018 10.1073/pnas.1804921115 VK6 GitHub acorg/parvo-2018 VK6 VK6 double AmpliTaq Gold DNA unknown Illumina HiSeq 2500 SINGLE WGS NA VK6-combined fasta_mapped https://raw.githubusercontent.com/acorg/parvo-2018/2404df9c9403fee2a7547ffe3ed697c0d072e28a/reads/combined/VK6-combined.fasta 5d4bb520173e0692b0e1232b7775853c 845688 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 17448321 ERR476784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476784/ERR476784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476784/ERR476784_2.fastq.gz 221282b6d8f2c84b0112926ca056a197;68c2676caac9047fb395d9ced9a737d7 1531518242;1518967127 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 7047406 ERR476785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476785/ERR476785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476785/ERR476785_2.fastq.gz c4de0ffa9f953c6a4260d580eb527c99;1ee5ef81a62c9afe5d3ad586007b4375 567376509;557712310 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 25700429 ERR476786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476786/ERR476786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476786/ERR476786_2.fastq.gz 0c93a6c48aa87acad9f46740c183f33f;89a22a6f9ced1607f586e630eab10b2f 2048700503;2015765836 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 73909548 ERR476787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476787/ERR476787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476787/ERR476787_2.fastq.gz 98b38a934fac3f3e6cf830dc57ba15ae;3cb7af3c29606b8a926a0f62480a3938 6554053284;6618846248 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 74001064 ERR476788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476788/ERR476788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476788/ERR476788_2.fastq.gz 650dccbe734713baba7e5f3964bab597;2820e6d472dae1482fa66cebcb4c4aca 6648554470;6727677715 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 SINGLE Unknown 159950709 ERR476799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476799/ERR476799.fastq.gz bee09f2abcaf0e41c2f68b9d863a8459 10460725471 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 3193242 ERR476807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476807/ERR476807_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476807/ERR476807_2.fastq.gz 6a39ecc0a7eaa5de8b617e4968c59202;60a1ced220de7756d2366f9506d8c6e6 266343460;265766090 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gok2 ENA PRJEB6090 ERS434180 unspecified double Unknown unknown Illumina HiSeq 2000 PAIRED Unknown 12281898 ERR476808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476808/ERR476808_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR476/ERR476808/ERR476808_2.fastq.gz 34e2dd82c71afccb1b7c8cc7701d9afe;906fc7469a05e0c7e06f65d46f676696 1018066410;1018080234 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947233 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947233/ERR5947233.fastq.gz 43ee2815ae6df7bc02c19150ca554635 63434647 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947234 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/004/ERR5947234/ERR5947234.fastq.gz 71e12b925ddb00125032c6014e5fce54 63965052 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947235 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/005/ERR5947235/ERR5947235.fastq.gz 31840d11dcf5adc8ac4cd2ca93856e81 63696753 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947236 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/006/ERR5947236/ERR5947236.fastq.gz 6137873a9d70c2c0b18bdce70c3c5fca 63435824 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947237 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947237/ERR5947237.fastq.gz 4e9e494209a35fab9e7c20fa0fa2bcad 63723564 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947238 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947238/ERR5947238.fastq.gz b4d7477e36fa74ed646e422349cb3ebd 62043626 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947239 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947239/ERR5947239.fastq.gz f488203bf96a8f50f2f5547030833ffe 60739987 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947240 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947240/ERR5947240.fastq.gz c0b3095ad298d12cc4fbf1755679adbb 60972314 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947241/ERR5947241.fastq.gz b3fce1796384fb0aad3494bcc9d54d5a 60798882 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947242 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947242/ERR5947242.fastq.gz af7cf61a6212d18a469cf4d50741131a 60582717 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947243 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947243/ERR5947243.fastq.gz 9c0d98afade28ecd632a17dea5889e08 67697522 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947247 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947247/ERR5947247.fastq.gz f9931702dbd0e1b5c704ba2be25d7ded 76708763 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947248 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947248/ERR5947248.fastq.gz 8a9208dcdffe3c5b6cdcf9c9e19db987 75883430 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947249 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947249/ERR5947249.fastq.gz 55b985fba6532167acfe550c1c2a095c 73891974 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947250 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947250/ERR5947250.fastq.gz 6ad12e9475938fffac225ea14a558920 74043902 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947251 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947251/ERR5947251.fastq.gz 83363b563be35ebcf404a22db48fa851 74199879 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947252/ERR5947252.fastq.gz e5e04eacb60cd8073d8f022834439dee 73633695 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947253/ERR5947253.fastq.gz 051b83b2a3b022e45e4b64036b7874f1 74087066 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947257/ERR5947257.fastq.gz 40be4c3c5720d1e7d16be25a4af46aef 43430701 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947258/ERR5947258.fastq.gz 11c096c01ddc178c1783668531a26464 43450414 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947259/ERR5947259.fastq.gz adda3ceb582187430bd6a8e414725d0b 43379846 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947260 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947267 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947267/ERR5947267.fastq.gz 111c437e266efdf3eb252a56f59c34a0 43444952 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947268 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947268/ERR5947268.fastq.gz 681d3f8217cb861e510c1c9dcfb722c1 43585437 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947269 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947269/ERR5947269.fastq.gz a693fef286480f225ddc81947831b503 43378479 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947270 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947277 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947277/ERR5947277.fastq.gz f4bc9ca61e6c4dd9a1854ca44f399933 43404196 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947278 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947278/ERR5947278.fastq.gz f8c79db41a91657cc8ac6be9825f266c 43400091 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947279 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947279/ERR5947279.fastq.gz e74354dda5b353f80ee30e202f7f6c00 43313819 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947280 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947287/ERR5947287.fastq.gz 78f3ac57f0ca21099bb9d7f3aac500ce 43413343 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947288/ERR5947288.fastq.gz 6ae0df78123e818c08169d695fead2a6 43454708 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947289/ERR5947289.fastq.gz 0cd2e37abadbf6d04563265638aaa7cb 43376215 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947290 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947297/ERR5947297.fastq.gz 056a066d4e240b08ec369c55be9d8799 43344830 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947298/ERR5947298.fastq.gz d3846b6164f85c56613b02b9ab687453 43337753 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947299/ERR5947299.fastq.gz 7e4494d4c05e25a9888697a73ad1da94 43811597 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947300/ERR5947300.fastq.gz b457231fa133a173e50a4155ef188c5c 43356643 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947301/ERR5947301.fastq.gz 13c0dbd6afd3f703020b4cbc11881d06 43363320 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947302/ERR5947302.fastq.gz 17625a8d44432f77b697898f5517fa23 43269554 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947303/ERR5947303.fastq.gz 2a84ff21b1f6c75fa2e71b150dd394af 43054680 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947307/ERR5947307.fastq.gz 93cc72fa1b579a278de95b3add79829c 43029227 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947308/ERR5947308.fastq.gz ad1a3c8e0392e78c1c598d3eb9ffdce3 43110333 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947309/ERR5947309.fastq.gz e4d01521d83309384cc491bbd738fa82 43200469 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947310 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947310/ERR5947310.fastq.gz 5832cbf11807e906b56f1f2544f36999 42992464 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947311 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947311/ERR5947311.fastq.gz f7912d84e44116bbad40c353cd25e416 42981974 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947312 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947312/ERR5947312.fastq.gz 38817c7d8974737e5eda18bb30436e00 43061374 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947313 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947313/ERR5947313.fastq.gz 025f8f9e6f4159261b4c0db52218f2a0 43079924 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947317 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947317/ERR5947317.fastq.gz d00464741bd88b15afb1a18a2ce5cead 42900720 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947318 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947318/ERR5947318.fastq.gz 8e2693ff59e74bdda5ba3eb6394f1dc5 43113695 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947319 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947319/ERR5947319.fastq.gz 8b2dbf5fa77b09985bb3881d8f1fa66c 43305800 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947320 fastq_all 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947327 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947327/ERR5947327.fastq.gz 8ee31319cac2752c7f6c303c21830024 43180964 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947328 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947328/ERR5947328.fastq.gz 139b19f554019ad31f66f3fd05c176fc 42951336 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947329 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947329/ERR5947329.fastq.gz 1da00f0a966ca3701f904fea4a02d3e2 43304735 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947330 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947330/ERR5947330.fastq.gz c536399ab2e3ecb470c297c71650342c 43403448 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947331 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947331/ERR5947331.fastq.gz 9b881f63f0b081fec0fded529dc20587 42830452 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947332 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947332/ERR5947332.fastq.gz 12d5d08db23733653cf087dbb7ef8025 43078955 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947333 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947333/ERR5947333.fastq.gz d3abd30fd5ebb3da0a8e2f98b461b2bc 43103365 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DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947337 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947337/ERR5947337.fastq.gz 56a440f5281734a21df42585f60e596d 43898749 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947338 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947338/ERR5947338.fastq.gz ca704ea241102fc82536c90ff6281a56 43592960 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947339 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947339/ERR5947339.fastq.gz 77718a3c3f3c9a50967a051636504099 43094591 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 April_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 177662 ERR5947340 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947340/ERR5947340.fastq.gz 47dce08f29d455eb00490f55c623f685 7733506 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947341 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947341/ERR5947341.fastq.gz 46ab926eb6f556b11c3cba9422a23d67 72906654 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947342 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947342/ERR5947342.fastq.gz 889009269c4f41938228889f16796b51 72770595 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947343 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947343/ERR5947343.fastq.gz 05c56b30124d411ba2357cd639907022 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947347 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947347/ERR5947347.fastq.gz c9879929e80283c47190ed53d2f01a7c 73331401 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947348 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947348/ERR5947348.fastq.gz 411dcd25c9f3ef4db747de0446b5bd19 73147773 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947349 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947349/ERR5947349.fastq.gz 26d7a0a4676fd88b803af1a76a292efc 72729355 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947350 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947357 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947357/ERR5947357.fastq.gz 546cef1dbff4ef8a4d0e6948652778f5 77054903 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947358 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947358/ERR5947358.fastq.gz 98196e6ffe17582a30e1827531cb368a 77838928 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947359 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947359/ERR5947359.fastq.gz 168361c7403899a202b146bf19ee3f54 77757407 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947360 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947367 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947367/ERR5947367.fastq.gz dbc24337e71f20ad037060ce217c6f20 46159421 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947368 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947368/ERR5947368.fastq.gz a3cbbfbe1ece2bdb5c8b75a30c9e63da 46162091 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947369 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947369/ERR5947369.fastq.gz 29e998487ff53443ba4f6e1c1ff9f355 46256427 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947370 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947377 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947377/ERR5947377.fastq.gz fbd45e7947cbead891cd497dc28be3c4 45794134 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947378 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947378/ERR5947378.fastq.gz 5fc36604017648fea7d7b5e5af3189f5 46366922 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947379 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947379/ERR5947379.fastq.gz a9be124efe3d13ef3c70dbfc310c0bda 46329971 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947380 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947387 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947387/ERR5947387.fastq.gz af047349bf9ebdd95a41439965ccb366 45751223 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947388 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947388/ERR5947388.fastq.gz 3459ad6584531500efd14073708dc929 45690954 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947389 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947389/ERR5947389.fastq.gz fc4cf32c388bd8c865499fa955c13d59 46268561 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947390 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947397 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947397/ERR5947397.fastq.gz fd55dba2d6cac91c0502f9d9312022fb 45756181 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947398/ERR5947398.fastq.gz 723e88e1487cf6f343c087fc33d2ea77 45775281 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947399 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947399/ERR5947399.fastq.gz cfb0ae3dd31f7dade703d6247e849119 45586362 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947400 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947407/ERR5947407.fastq.gz d6ef2fc4169be2915335ea0a79b420cd 45921526 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947408/ERR5947408.fastq.gz b011e9f116637dda46e6b48d4c18d84e 45757461 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947409/ERR5947409.fastq.gz 1c91ec14cfdd2dc2bc9b2621ef1f76d3 45718938 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947410 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947410/ERR5947410.fastq.gz 85d2e58aa34810a15ba00af587861d64 45648275 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947411 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947411/ERR5947411.fastq.gz 17ecaf012fc762e2c8f9dea7de5f1e18 45664455 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947412 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/002/ERR5947412/ERR5947412.fastq.gz 1255839518f543e68d11b09d4317de98 46322652 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947413 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/003/ERR5947413/ERR5947413.fastq.gz a9d88349bdf10670a6cfc24fd06de53a 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947417 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947417/ERR5947417.fastq.gz d65952626733996a3645c059ae28a7b8 45977500 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947418 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947418/ERR5947418.fastq.gz 37c59ef5dd3f8ee78f24f64653c998e7 45982080 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947419 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947419/ERR5947419.fastq.gz 3bfc720abf07dd16c6518cd84ddbc6cd 45970961 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947420 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947427 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947427/ERR5947427.fastq.gz b94bf27521d5036855889fd190ca1f7b 46063814 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947428 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947428/ERR5947428.fastq.gz f9a6a8dc3b8d2471f9a30a9b972999c5 45946797 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947429 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947429/ERR5947429.fastq.gz 2de6a78c5f9c56fea3a52b22a9160661 45887842 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947430 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947437 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947437/ERR5947437.fastq.gz 937b8b7eb035f1b26e0282bdd500df95 46174443 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947438 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947438/ERR5947438.fastq.gz 9b939aa81850e91c21c95b2a5be19540 46195494 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947439 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947439/ERR5947439.fastq.gz 61118a310fc924e492efc8c13bed1cec 46236107 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947440 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947447 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947447/ERR5947447.fastq.gz 29261a983d84c3e9b6e174b19fb51c08 46494416 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947448 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947448/ERR5947448.fastq.gz 3da85a85c4ab861df2796a96aac83928 46488119 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947449 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947449/ERR5947449.fastq.gz a0404b49663a0a17d06377e40c86b403 46309490 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947450 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947467 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947467/ERR5947467.fastq.gz d17941f2e2c4fdc52c74d931e949eb27 46124282 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947468 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947468/ERR5947468.fastq.gz 4ecb87f5cb4ab31b9a64eff25117ce3c 46273069 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947469 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947469/ERR5947469.fastq.gz cca02d01e74baa3939e5d029c586a1c5 46257381 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947470 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947477 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947477/ERR5947477.fastq.gz 8723fa6122f96474cd58ae2b860cdb95 45929909 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947478/ERR5947478.fastq.gz e01850b223acb3893f74bb6ac93bd913 45936068 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947479/ERR5947479.fastq.gz 2c7d45e8b1927bb4439651a3394446a5 46317423 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947480 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947487 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947487/ERR5947487.fastq.gz 311d5f120eb76b6c6b8a0232b0c60555 45838283 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947488 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947488/ERR5947488.fastq.gz 7aab4aacc959b6ad87daf7266986dc77 45847736 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947489 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947489/ERR5947489.fastq.gz 16f57d891e8f1c5a97f6a024e274cc52 45847317 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947490 fastq_all 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AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947497 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/007/ERR5947497/ERR5947497.fastq.gz 4cd5b096a279edb5dd631ffa2ac04a1a 45775816 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/008/ERR5947498/ERR5947498.fastq.gz 5ac1ed0bb718e6d53233c20509ab7f2d 45753667 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947499 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/009/ERR5947499/ERR5947499.fastq.gz fe3a6626c0ce73b68fae4e2985f009f8 45790942 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 1000000 ERR5947500 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/000/ERR5947500/ERR5947500.fastq.gz 9c0c6e08bc5350ae0ff13a4bfc5e446a 45841886 +DeDios2021 2021 10.1016/j.isci.2021.103021 F1691-1810 ENA PRJEB43276 ERS6464927 October_L014 double AmpliTaq Gold DNA none Illumina HiSeq 4000 SINGLE WGS 315081 ERR5947501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR594/001/ERR5947501/ERR5947501.fastq.gz ca8583e019cc707cee1199dce34a9503 14421106 +Granehall2021 2021 10.1186/s40168-021-01132-8 2102 ENA PRJEB43389 ERS6205401 2102 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS 21344616 ERR5670969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR567/009/ERR5670969/ERR5670969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR567/009/ERR5670969/ERR5670969_2.fastq.gz 1548e1beb98d29bc48dacc733fa70a6d;9e055de188c1b178c86b19028714ea4d 482055984;496434335 +Kocher2021 2021 10.1126/science.abi5658 ADR001 ENA PRJEB45699 ERS6597748 ADR001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 59 ERR6053580 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053580/ERR6053580.fastq.gz 8253e6fcb83eb618347f882084e6f6ed 3400 +Kocher2021 2021 10.1126/science.abi5658 AKB003 ENA PRJEB45699 ERS6597749 AKB003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6027 ERR6053581 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053581/ERR6053581.fastq.gz 2d6013cca1bb3dbac1b9f3a297b3e85f 255666 +Kocher2021 2021 10.1126/science.abi5658 ALA098 ENA PRJEB45699 ERS6597750 ALA098.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 116 ERR6053582 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053582/ERR6053582.fastq.gz 727d6b71d071c1311aa1ff210fd175ab 6230 +Kocher2021 2021 10.1126/science.abi5658 ALA110 ENA PRJEB45699 ERS6597751 ALA110.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 147 ERR6053583 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053583/ERR6053583.fastq.gz 1c5b9aac7e6e570c757b9099a2cbd69a 5001 +Kocher2021 2021 10.1126/science.abi5658 ARM001 ENA PRJEB45699 ERS6597752 ARM001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3248 ERR6053584 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053584/ERR6053584.fastq.gz 85daed8a7edcb5b16bb1cb6036d758ef 78050 +Kocher2021 2021 10.1126/science.abi5658 ARM0023 ENA PRJEB45699 ERS6597753 unspecified double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 439 ERR6053585 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053585/ERR6053585.fastq.gz 7a7ae7fb7a012e5856b3f074c126fd62 12016 +Kocher2021 2021 10.1126/science.abi5658 ART005 ENA PRJEB45699 ERS6597754 ART005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 32 ERR6053586 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053586/ERR6053586.fastq.gz f5304d08e116d2a1c2936e55e92499d4 1223 +Kocher2021 2021 10.1126/science.abi5658 ART024 ENA PRJEB45699 ERS6597755 ART024.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 67 ERR6053587 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053587/ERR6053587.fastq.gz a8f0f28e5e74982cfbf437a076efc988 2045 +Kocher2021 2021 10.1126/science.abi5658 BNL005 ENA PRJEB45699 ERS6597756 BNL005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 413 ERR6053588 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053588/ERR6053588.fastq.gz b8f6f711c4de4f1d08e861c950cc74d3 14563 +Kocher2021 2021 10.1126/science.abi5658 BON020 ENA PRJEB45699 ERS6597757 BON020.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 369 ERR6053589 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053589/ERR6053589.fastq.gz 61a2748d4c7d9c666c3a2b247e1ced7d 10806 +Kocher2021 2021 10.1126/science.abi5658 BOO006 ENA PRJEB45699 ERS6597758 BOO006.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1067 ERR6053590 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053590/ERR6053590.fastq.gz b6be2d65e2b5ef9372819611b11c2d71 28668 +Kocher2021 2021 10.1126/science.abi5658 BOO008 ENA PRJEB45699 ERS6597759 BOO008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5323 ERR6053591 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053591/ERR6053591.fastq.gz b26258c46c43fbad2affdfe6cc913aa3 131403 +Kocher2021 2021 10.1126/science.abi5658 BRE008 ENA PRJEB45699 ERS6597760 BRE008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1459 ERR6053592 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053592/ERR6053592.fastq.gz 813a5e8ff44f310261897e3f152d8f5c 61140 +Kocher2021 2021 10.1126/science.abi5658 BRE026 ENA PRJEB45699 ERS6597761 BRE026.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2830 ERR6053593 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053593/ERR6053593.fastq.gz afce6e7f33bd132a31ac0a9d8d1f3b79 147893 +Kocher2021 2021 10.1126/science.abi5658 BRE028 ENA PRJEB45699 ERS6597762 BRE028.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2338 ERR6053594 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053594/ERR6053594.fastq.gz 5b1e217e39b126f7d9848a906151f588 127411 +Kocher2021 2021 10.1126/science.abi5658 CAA002 ENA PRJEB45699 ERS6597763 CAA002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 58 ERR6053595 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053595/ERR6053595.fastq.gz cdf661a0162db3fa56d8d14590d327ae 2058 +Kocher2021 2021 10.1126/science.abi5658 CAO009 ENA PRJEB45699 ERS6597764 CAO009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1301 ERR6053596 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053596/ERR6053596.fastq.gz 92f1941d3c3211e6c8b2d34d79149c29 46626 +Kocher2021 2021 10.1126/science.abi5658 CHA003 ENA PRJEB45699 ERS6597765 CHA003.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 188 ERR6053597 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053597/ERR6053597.fastq.gz 2a92ef1fb264594f6205e74ed0c84084 6297 +Kocher2021 2021 10.1126/science.abi5658 CHT001 ENA PRJEB45699 ERS6597766 CHT001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 865 ERR6053598 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053598/ERR6053598.fastq.gz 11fa858c0b9a6977a34beca59aa4e72b 29165 +Kocher2021 2021 10.1126/science.abi5658 CLL005 ENA PRJEB45699 ERS6597767 CLL005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 704 ERR6053599 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053599/ERR6053599.fastq.gz 3dcae3a7f551f38f7b218bbc98f1774a 26884 +Kocher2021 2021 10.1126/science.abi5658 CUN002 ENA PRJEB45699 ERS6597768 CUN002.D0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 172 ERR6053600 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053600/ERR6053600.fastq.gz aa94eff253e19219f85650ea9879a6d4 6902 +Kocher2021 2021 10.1126/science.abi5658 DER027 ENA PRJEB45699 ERS6597769 DER027.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1176 ERR6053601 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053601/ERR6053601.fastq.gz 3fbb07f85b11ee39d3e828dd501daa0a 35794 +Kocher2021 2021 10.1126/science.abi5658 DOG007 ENA PRJEB45699 ERS6597770 DOG007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 14 ERR6053602 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053602/ERR6053602.fastq.gz 868b0f00a855b342f749c5d1b63473e8 754 +Kocher2021 2021 10.1126/science.abi5658 ELT005 ENA PRJEB45699 ERS6597771 ELT005.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5111 ERR6053603 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053603/ERR6053603.fastq.gz 68edfb11cc84a023f41c1b71ffe4334a 137769 +Kocher2021 2021 10.1126/science.abi5658 ELT006 ENA PRJEB45699 ERS6597772 ELT006.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4675 ERR6053604 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053604/ERR6053604.fastq.gz 91af68f869a0331902cc30b21522e042 123945 +Kocher2021 2021 10.1126/science.abi5658 GGN005 ENA PRJEB45699 ERS6597773 GGN005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 205 ERR6053605 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053605/ERR6053605.fastq.gz 833dfe9d162d0673900586dfffdba0a8 9817 +Kocher2021 2021 10.1126/science.abi5658 GRG001 ENA PRJEB45699 ERS6597774 GRG001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1499 ERR6053606 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053606/ERR6053606.fastq.gz 346bc1768a01984f7409265bbc037630 34270 +Kocher2021 2021 10.1126/science.abi5658 GRG036 ENA PRJEB45699 ERS6597775 GRG036.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 793 ERR6053607 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053607/ERR6053607.fastq.gz e73c957b641bfc20acee71eeef67da5c 25023 +Kocher2021 2021 10.1126/science.abi5658 HAL05 ENA PRJEB45699 ERS6597776 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4948 ERR6053608 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053608/ERR6053608.fastq.gz b5a0c599871fcc5060148e24e9cb9df8 213843 +Kocher2021 2021 10.1126/science.abi5658 HAL15 ENA PRJEB45699 ERS6597777 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 5543 ERR6053609 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053609/ERR6053609.fastq.gz d1845d05892ed06e8726f588fdff1d1e 201580 +Kocher2021 2021 10.1126/science.abi5658 HOP004 ENA PRJEB45699 ERS6597778 HOP004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1200 ERR6053610 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053610/ERR6053610.fastq.gz 61d73a542d493bed202efdbc319b065e 38109 +Kocher2021 2021 10.1126/science.abi5658 HSL001 ENA PRJEB45699 ERS6597779 HSL001.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 316 ERR6053611 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053611/ERR6053611.fastq.gz 916ec7d96cc2bb29c42d36217eeeda50 9121 +Kocher2021 2021 10.1126/science.abi5658 HUA056 ENA PRJEB45699 ERS6597780 HUA056.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 94 ERR6053612 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053612/ERR6053612.fastq.gz 861f21a8cd93d20c7dab4d0c9ac80a5e 4333 +Kocher2021 2021 10.1126/science.abi5658 HUA063 ENA PRJEB45699 ERS6597781 HUA063.A0102 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 11 ERR6053613 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053613/ERR6053613.fastq.gz 0a23f779c421bfd1158cea51a9723da8 548 +Kocher2021 2021 10.1126/science.abi5658 I0061 ENA PRJEB45699 ERS6597782 XXX001.A161019 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 1571 ERR6053614 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053614/ERR6053614.fastq.gz de0dd45c052fd06dd51fceacbd777937 40197 +Kocher2021 2021 10.1126/science.abi5658 I0100 ENA PRJEB45699 ERS6597783 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1363 ERR6053615 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053615/ERR6053615.fastq.gz 65ddb321d82426881ef8b896456eccfd 45286 +Kocher2021 2021 10.1126/science.abi5658 I0104 ENA PRJEB45699 ERS6597784 unspecified double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1810 ERR6053616 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053616/ERR6053616.fastq.gz b36e95e5f6e63e38d21723f26a112149 55010 +Kocher2021 2021 10.1126/science.abi5658 I0111 ENA PRJEB45699 ERS6597785 XXX001.A161203 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 45 ERR6053617 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053617/ERR6053617.fastq.gz 74830b5a7473333a410719a65842e9db 1954 +Kocher2021 2021 10.1126/science.abi5658 I0157 ENA PRJEB45699 ERS6597786 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2491 ERR6053618 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053618/ERR6053618.fastq.gz 26426154a189ae056eb0d1561bc9281a 99533 +Kocher2021 2021 10.1126/science.abi5658 I0161 ENA PRJEB45699 ERS6597787 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2433 ERR6053619 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053619/ERR6053619.fastq.gz 7d3c57b2ed94bf6727e7c69a5a84dca6 82117 +Kocher2021 2021 10.1126/science.abi5658 I0162 ENA PRJEB45699 ERS6597788 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 43 ERR6053620 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053620/ERR6053620.fastq.gz 87b36333c29d3efc1abf7b36550f8bc8 2183 +Kocher2021 2021 10.1126/science.abi5658 I0163 ENA PRJEB45699 ERS6597789 XXX001.A161062 double Unknown none Illumina HiSeq 4000 SINGLE Targeted-Capture 35 ERR6053621 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053621/ERR6053621.fastq.gz 1d71fc2a37cb80eb31381e396937d326 1818 +Kocher2021 2021 10.1126/science.abi5658 I0216 ENA PRJEB45699 ERS6597790 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 3056 ERR6053622 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053622/ERR6053622.fastq.gz 891a553749a497a43047c65e292c182a 119529 +Kocher2021 2021 10.1126/science.abi5658 I0217 ENA PRJEB45699 ERS6597791 XXX001.A16562 double Unknown full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 471 ERR6053623 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053623/ERR6053623.fastq.gz 902691363b8f5227ed359e01f0aefbe5 17823 +Kocher2021 2021 10.1126/science.abi5658 I0411 ENA PRJEB45699 ERS6597792 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 2100 ERR6053624 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053624/ERR6053624.fastq.gz 2c15ab3a9a1339000d6fe5a20d2b2825 55412 +Kocher2021 2021 10.1126/science.abi5658 I0461 ENA PRJEB45699 ERS6597793 unspecified double Unknown unknown Illumina HiSeq 4000 SINGLE Targeted-Capture 3496 ERR6053625 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053625/ERR6053625.fastq.gz 214bb4836d71ae1d5a6381549791b909 89172 +Kocher2021 2021 10.1126/science.abi5658 I0551 ENA PRJEB45699 ERS6597794 XXX001.A161111 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 835 ERR6053626 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053626/ERR6053626.fastq.gz d75e905ce8b5220cb5f525397cbba442 24230 +Kocher2021 2021 10.1126/science.abi5658 I0554 ENA PRJEB45699 ERS6597795 XXX001.A161114 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 7 ERR6053627 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053627/ERR6053627.fastq.gz 051c141c05ee7b0c21f6e1383dc42867 390 +Kocher2021 2021 10.1126/science.abi5658 I0784 ENA PRJEB45699 ERS6597796 XXX001.A161154 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 538 ERR6053628 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053628/ERR6053628.fastq.gz 81a4d2d846c3082a7a2493a05e5ff4ae 13784 +Kocher2021 2021 10.1126/science.abi5658 I0795 ENA PRJEB45699 ERS6597797 XXX001.A161165 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1898 ERR6053629 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053629/ERR6053629.fastq.gz 9fd507bb8bbd41eefbe98255b4b4490d 46256 +Kocher2021 2021 10.1126/science.abi5658 I0796 ENA PRJEB45699 ERS6597798 XXX001.A161166 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 137 ERR6053630 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053630/ERR6053630.fastq.gz f586cf174dc4b09f0deaccd9a38beb7c 4654 +Kocher2021 2021 10.1126/science.abi5658 I0797 ENA PRJEB45699 ERS6597799 XXX001.A161167 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 122 ERR6053631 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053631/ERR6053631.fastq.gz a9e520af283e9771f0bfd4c0ef3bdf0c 5070 +Kocher2021 2021 10.1126/science.abi5658 I0798 ENA PRJEB45699 ERS6597800 XXX001.A161168 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 442 ERR6053632 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053632/ERR6053632.fastq.gz 54271bb0126e863560251a6c6eb4179a 18782 +Kocher2021 2021 10.1126/science.abi5658 I0960 ENA PRJEB45699 ERS6597801 XXX001.A161227 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 103 ERR6053633 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053633/ERR6053633.fastq.gz 0d041f4a2ed9b23f419d160941caaa49 4025 +Kocher2021 2021 10.1126/science.abi5658 I0972 ENA PRJEB45699 ERS6597802 XXX001.A161239 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 8 ERR6053634 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053634/ERR6053634.fastq.gz 09ef907de6a9ab2933802ac765b1cda2 397 +Kocher2021 2021 10.1126/science.abi5658 I1321 ENA PRJEB45699 ERS6597803 XXX001.A161295 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 920 ERR6053635 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053635/ERR6053635.fastq.gz ef8d96ca4ed8ecbd5e3211278f349a84 36490 +Kocher2021 2021 10.1126/science.abi5658 I1344 ENA PRJEB45699 ERS6597804 XXX001.A161318 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4093 ERR6053636 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053636/ERR6053636.fastq.gz 9fa610e44ba80b543c089d3403c32e73 103492 +Kocher2021 2021 10.1126/science.abi5658 I2005 ENA PRJEB45699 ERS6597805 XXX001.A161356 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 222 ERR6053637 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053637/ERR6053637.fastq.gz e7c2d7de69da79fc3c3a3633be1df4aa 8706 +Kocher2021 2021 10.1126/science.abi5658 I2006 ENA PRJEB45699 ERS6597806 XXX001.A161357 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 98 ERR6053638 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053638/ERR6053638.fastq.gz 9027eafe914a5c5f20c4226a2c2a5b16 4079 +Kocher2021 2021 10.1126/science.abi5658 I2017 ENA PRJEB45699 ERS6597807 XXX001.A161368 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 17 ERR6053639 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053639/ERR6053639.fastq.gz 9419860079a267382bb5912d17825b89 709 +Kocher2021 2021 10.1126/science.abi5658 I2020 ENA PRJEB45699 ERS6597808 XXX001.A161371 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 365 ERR6053640 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053640/ERR6053640.fastq.gz ab7765291fe43f4b406350fadb976866 14286 +Kocher2021 2021 10.1126/science.abi5658 I2027 ENA PRJEB45699 ERS6597809 XXX001.A161378 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19 ERR6053641 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053641/ERR6053641.fastq.gz 269735aef94a534f966e6d8664d3cf76 908 +Kocher2021 2021 10.1126/science.abi5658 I2031 ENA PRJEB45699 ERS6597810 XXX001.A161382 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1075 ERR6053642 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053642/ERR6053642.fastq.gz f276f18f5823ceec4080a8ba2bc69739 44735 +Kocher2021 2021 10.1126/science.abi5658 I2032 ENA PRJEB45699 ERS6597811 XXX001.A161383 double Unknown half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 36 ERR6053643 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053643/ERR6053643.fastq.gz e41f15526a5973d0be74a091b1d693ba 1453 +Kocher2021 2021 10.1126/science.abi5658 IKI009 ENA PRJEB45699 ERS6597812 IKI009.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 293 ERR6053644 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053644/ERR6053644.fastq.gz b6dee4a538f52d1d8d93e453ff80b6dd 8965 +Kocher2021 2021 10.1126/science.abi5658 ISB002 ENA PRJEB45699 ERS6597813 ISB002.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1820 ERR6053645 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053645/ERR6053645.fastq.gz 354cbe54177bf1c318d182e878cbcf15 59237 +Kocher2021 2021 10.1126/science.abi5658 JAZ001 ENA PRJEB45699 ERS6597814 JAZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1235 ERR6053646 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053646/ERR6053646.fastq.gz 6a460ca60b09bd14d75c95642e353eea 36177 +Kocher2021 2021 10.1126/science.abi5658 KAP002 ENA PRJEB45699 ERS6597815 KAP002.A0202 double PfuTurbo Cx Hotstart DNA full-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 4530 ERR6053647 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053647/ERR6053647.fastq.gz 679c187b21f3dc727510e80683147274 210442 +Kocher2021 2021 10.1126/science.abi5658 KBD002 ENA PRJEB45699 ERS6597816 KBD002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1032 ERR6053648 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053648/ERR6053648.fastq.gz 64e55b044e60523f8e32674d2265832f 27987 +Kocher2021 2021 10.1126/science.abi5658 KDC001 ENA PRJEB45699 ERS6597817 KDC001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 18 ERR6053649 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053649/ERR6053649.fastq.gz 1fb787c26300e0b2befa2460e6ca3f89 1299 +Kocher2021 2021 10.1126/science.abi5658 KEL045 ENA PRJEB45699 ERS6597818 KEL045.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 12 ERR6053650 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053650/ERR6053650.fastq.gz 1361112564111f2715a0877a9bcf9684 797 +Kocher2021 2021 10.1126/science.abi5658 KIL044 ENA PRJEB45699 ERS6597819 KIL044.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2596 ERR6053651 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053651/ERR6053651.fastq.gz 02b23211b5a91c4b96708366b83f971e 122042 +Kocher2021 2021 10.1126/science.abi5658 KLE031 ENA PRJEB45699 ERS6597820 KLE031.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6480 ERR6053652 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053652/ERR6053652.fastq.gz 4830865c306060a82b55b4b12714cb49 171100 +Kocher2021 2021 10.1126/science.abi5658 KRA001 ENA PRJEB45699 ERS6597821 KRA001.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1598 ERR6053653 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053653/ERR6053653.fastq.gz 2bd5d939584768115daf6960a9009448 101813 +Kocher2021 2021 10.1126/science.abi5658 KRA010 ENA PRJEB45699 ERS6597822 KRA010.F0101 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1749 ERR6053654 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053654/ERR6053654.fastq.gz 9797a82d1264aed202657c3d1263116c 102609 +Kocher2021 2021 10.1126/science.abi5658 KUE033 ENA PRJEB45699 ERS6597823 KUE033.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 794 ERR6053655 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053655/ERR6053655.fastq.gz 0fc10068a32b2e17596cfefdc07a061d 32550 +Kocher2021 2021 10.1126/science.abi5658 KVK001 ENA PRJEB45699 ERS6597824 KVK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 351 ERR6053656 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053656/ERR6053656.fastq.gz a6e9348f2afece33e8bc8892a85fd572 9659 +Kocher2021 2021 10.1126/science.abi5658 LEU065 ENA PRJEB45699 ERS6597825 LEU065.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 985 ERR6053657 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053657/ERR6053657.fastq.gz a5595a7ad821ceb1d3dfa8f53f12e719 35556 +Kocher2021 2021 10.1126/science.abi5658 Loschbour ENA PRJEB45699 ERS6597826 unspecified unknown Unknown unknown Illumina HiSeq 4000 SINGLE WGS 795 ERR6053658 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053658/ERR6053658.fastq.gz 822c533dd769c4559956d50645d21e1f 18137 +Kocher2021 2021 10.1126/science.abi5658 MAP007 ENA PRJEB45699 ERS6597827 MAP007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 353 ERR6053659 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053659/ERR6053659.fastq.gz bd11ebfe7b182268876eb4d20b1ff1a6 9439 +Kocher2021 2021 10.1126/science.abi5658 MAY017 ENA PRJEB45699 ERS6597828 MAY017.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2323 ERR6053660 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053660/ERR6053660.fastq.gz 7d54e28c3fa93ca9e0189f595ded516d 113618 +Kocher2021 2021 10.1126/science.abi5658 MIB003 ENA PRJEB45699 ERS6597829 MIB003.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 696 ERR6053661 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053661/ERR6053661.fastq.gz 6f9bc14aa1771352fdfa8d84735356d1 18947 +Kocher2021 2021 10.1126/science.abi5658 MIB011 ENA PRJEB45699 ERS6597830 MIB011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 295 ERR6053662 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053662/ERR6053662.fastq.gz ce26ffbf802d085cf341c04be44d4662 9055 +Kocher2021 2021 10.1126/science.abi5658 MIB040 ENA PRJEB45699 ERS6597831 MIB040.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6323 ERR6053663 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053663/ERR6053663.fastq.gz cbe0c1a83d9f4414e7445be2b4c11b88 276756 +Kocher2021 2021 10.1126/science.abi5658 MIB041 ENA PRJEB45699 ERS6597832 MIB041.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 5186 ERR6053664 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053664/ERR6053664.fastq.gz c628cd088e888a42b593c89fbca3f78b 198284 +Kocher2021 2021 10.1126/science.abi5658 MIS002 ENA PRJEB45699 ERS6597833 MIS002.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 347 ERR6053665 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053665/ERR6053665.fastq.gz d50d4ba75b3f4d5bdcf4e4c49d7163f7 12608 +Kocher2021 2021 10.1126/science.abi5658 MK5004 ENA PRJEB45699 ERS6597834 MK5004.D0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2986 ERR6053666 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053666/ERR6053666.fastq.gz 1cf50351b7d9080f05235cffe602b4d9 66768 +Kocher2021 2021 10.1126/science.abi5658 MK5009 ENA PRJEB45699 ERS6597835 MK5009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2272 ERR6053667 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053667/ERR6053667.fastq.gz 594eb18a1b1c0adcd032793fc1219896 49486 +Kocher2021 2021 10.1126/science.abi5658 MKL025 ENA PRJEB45699 ERS6597836 MKL025.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1872 ERR6053668 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053668/ERR6053668.fastq.gz 9a1a1a10c4e0c451520e2f589f0db205 70532 +Kocher2021 2021 10.1126/science.abi5658 MLR005 ENA PRJEB45699 ERS6597837 MLR005.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 707 ERR6053669 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053669/ERR6053669.fastq.gz 66280817e5f48bf8501bf0061bee96e4 27531 +Kocher2021 2021 10.1126/science.abi5658 MN2003 ENA PRJEB45699 ERS6597838 MN2003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 340 ERR6053670 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053670/ERR6053670.fastq.gz 551082a251e17fdbf33876b5acfd02c4 9169 +Kocher2021 2021 10.1126/science.abi5658 MOT001 ENA PRJEB45699 ERS6597839 MOT001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2391 ERR6053671 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053671/ERR6053671.fastq.gz 0035814de5c49b8d51f0867a2b543511 58295 +Kocher2021 2021 10.1126/science.abi5658 MPR001 ENA PRJEB45699 ERS6597840 MPR001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 441 ERR6053672 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053672/ERR6053672.fastq.gz aefa6b57ec6842c5aa2f9537655a600a 11207 +Kocher2021 2021 10.1126/science.abi5658 MUR007 ENA PRJEB45699 ERS6597841 MUR007.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 801 ERR6053673 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053673/ERR6053673.fastq.gz df634b4d4a75400ff1affc878233e654 34061 +Kocher2021 2021 10.1126/science.abi5658 NV3001 ENA PRJEB45699 ERS6597842 NV3001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 19 ERR6053674 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053674/ERR6053674.fastq.gz 76ba890c28a59d127f33c2cc38685084 1042 +Kocher2021 2021 10.1126/science.abi5658 OAI017 ENA PRJEB45699 ERS6597843 OAI017.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2252 ERR6053675 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053675/ERR6053675.fastq.gz 3b7ce0086258ec5f39fc3347d5ca9cc9 106915 +Kocher2021 2021 10.1126/science.abi5658 OOH025 ENA PRJEB45699 ERS6597844 OOH025.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1614 ERR6053676 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053676/ERR6053676.fastq.gz b7c8cff7e4a4c0b7da75f3173bcc7e03 49944 +Kocher2021 2021 10.1126/science.abi5658 ORE002 ENA PRJEB45699 ERS6597845 ORE002.A0104 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2715 ERR6053677 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053677/ERR6053677.fastq.gz 1fecdfa7a3c13179318031d0d07f398b 93608 +Kocher2021 2021 10.1126/science.abi5658 PDA001 ENA PRJEB45699 ERS6597846 PDA001.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1414 ERR6053678 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053678/ERR6053678.fastq.gz 8ab965e098e957b77a5da4cdfa19ae78 79499 +Kocher2021 2021 10.1126/science.abi5658 PDA003 ENA PRJEB45699 ERS6597847 PDA003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1162 ERR6053679 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053679/ERR6053679.fastq.gz 9c9db153ff6702f9f6a0a7c7dcde29b0 50293 +Kocher2021 2021 10.1126/science.abi5658 PEN003 ENA PRJEB45699 ERS6597848 PEN003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 366 ERR6053680 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053680/ERR6053680.fastq.gz cce327677d0b22bcc75d97510e9c6447 9907 +Kocher2021 2021 10.1126/science.abi5658 PLS004 ENA PRJEB45699 ERS6597849 PLS004.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2811 ERR6053681 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053681/ERR6053681.fastq.gz 70938e4e7a8702955053b4078df9e157 118518 +Kocher2021 2021 10.1126/science.abi5658 PLZ001 ENA PRJEB45699 ERS6597850 PLZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2372 ERR6053682 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053682/ERR6053682.fastq.gz 67dedf837babe66260d97715597b0c72 54153 +Kocher2021 2021 10.1126/science.abi5658 QUE004 ENA PRJEB45699 ERS6597851 QUE004.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 95 ERR6053683 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053683/ERR6053683.fastq.gz f856e7d03b4c685b830833b81cf36b56 4060 +Kocher2021 2021 10.1126/science.abi5658 RMI002 ENA PRJEB45699 ERS6597852 RMI002.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 4369 ERR6053684 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053684/ERR6053684.fastq.gz 5d0058825b088735f19dc53733369c11 196308 +Kocher2021 2021 10.1126/science.abi5658 SEC006 ENA PRJEB45699 ERS6597853 SEC006.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1118 ERR6053685 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053685/ERR6053685.fastq.gz c5640a00537072b500bf4db61c24e594 30801 +Kocher2021 2021 10.1126/science.abi5658 SED009 ENA PRJEB45699 ERS6597854 SED009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 286 ERR6053686 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053686/ERR6053686.fastq.gz eacffe52474c4e80fb4c4f2374ee328b 13411 +Kocher2021 2021 10.1126/science.abi5658 SGR003 ENA PRJEB45699 ERS6597855 SGR003.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2734 ERR6053687 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053687/ERR6053687.fastq.gz cfbcf4a2dcfad465be90a303701b027b 66727 +Kocher2021 2021 10.1126/science.abi5658 SGR004 ENA PRJEB45699 ERS6597856 SGR004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 520 ERR6053688 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053688/ERR6053688.fastq.gz 4d5d243aa8e2d0e35b46b36e9ac27c20 13999 +Kocher2021 2021 10.1126/science.abi5658 SHK001 ENA PRJEB45699 ERS6597857 SHK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1017 ERR6053689 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053689/ERR6053689.fastq.gz 3cffadf2caca415fd3cbc471b53ee781 47282 +Kocher2021 2021 10.1126/science.abi5658 SID005 ENA PRJEB45699 ERS6597858 SID005.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 1246 ERR6053690 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053690/ERR6053690.fastq.gz 64b340381015573135ad40b5ab994e7b 36692 +Kocher2021 2021 10.1126/science.abi5658 SJN005 ENA PRJEB45699 ERS6597859 SJN005.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 28 ERR6053691 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053691/ERR6053691.fastq.gz 7c5a333582ec3b50a325356d738c4206 1332 +Kocher2021 2021 10.1126/science.abi5658 SJN013 ENA PRJEB45699 ERS6597860 SJN013.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 1139 ERR6053692 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053692/ERR6053692.fastq.gz d48cc97628810aaa17386f6c3bfb6ed4 30644 +Kocher2021 2021 10.1126/science.abi5658 SMH004 ENA PRJEB45699 ERS6597861 SMH004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 104 ERR6053693 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053693/ERR6053693.fastq.gz 413e75f3f8b4863f604fff3f789cbf18 3423 +Kocher2021 2021 10.1126/science.abi5658 STR144 ENA PRJEB45699 ERS6597862 STR144.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2332 ERR6053694 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053694/ERR6053694.fastq.gz d53f30ecca2575f9f0e5783bee1ae053 93489 +Kocher2021 2021 10.1126/science.abi5658 SUA002 ENA PRJEB45699 ERS6597863 SUA002.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 208 ERR6053695 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053695/ERR6053695.fastq.gz 628bbffbfcab48ab9f79a809c336913a 10699 +Kocher2021 2021 10.1126/science.abi5658 SUA007 ENA PRJEB45699 ERS6597864 SUA007.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 128 ERR6053696 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053696/ERR6053696.fastq.gz 85fd5848ebd386964b0e9efb996e9e34 7930 +Kocher2021 2021 10.1126/science.abi5658 TRI011 ENA PRJEB45699 ERS6597865 TRI011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 2289 ERR6053697 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053697/ERR6053697.fastq.gz 1ad69e179f0095a063b254058f52cc62 55453 +Kocher2021 2021 10.1126/science.abi5658 TTK002 ENA PRJEB45699 ERS6597866 TTK002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 29 ERR6053698 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053698/ERR6053698.fastq.gz 901ca383ea4c3579859a287f8d1b79cb 999 +Kocher2021 2021 10.1126/science.abi5658 UOO011 ENA PRJEB45699 ERS6597867 UOO011.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 143 ERR6053699 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053699/ERR6053699.fastq.gz e9934e63c2ef7a7dafa0aa372937b8e5 4589 +Kocher2021 2021 10.1126/science.abi5658 UOO024 ENA PRJEB45699 ERS6597868 UOO024.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 46 ERR6053700 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053700/ERR6053700.fastq.gz 2b03e2c8c967529c000a98a851ff3a5a 1726 +Kocher2021 2021 10.1126/science.abi5658 UOO033 ENA PRJEB45699 ERS6597869 UOO033.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 357 ERR6053701 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053701/ERR6053701.fastq.gz ba20baa24d69135be60b8c084642b5af 9266 +Kocher2021 2021 10.1126/science.abi5658 UZZ061 ENA PRJEB45699 ERS6597870 UZZ061.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 6409 ERR6053702 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053702/ERR6053702.fastq.gz 4c8aaaeb0705447e83a90a4022100e7a 281837 +Kocher2021 2021 10.1126/science.abi5658 UZZ075 ENA PRJEB45699 ERS6597871 UZZ075.A0201 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3044 ERR6053703 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053703/ERR6053703.fastq.gz 9b0f06b244af64f09de6bc508486dc23 73804 +Kocher2021 2021 10.1126/science.abi5658 UZZ081 ENA PRJEB45699 ERS6597872 UZZ081.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2793 ERR6053704 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053704/ERR6053704.fastq.gz 87b6545e4ec4144517d94a2ec60a0407 88019 +Kocher2021 2021 10.1126/science.abi5658 UZZ099 ENA PRJEB45699 ERS6597873 UZZ099.A0201 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3512 ERR6053705 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053705/ERR6053705.fastq.gz a230130381d5ca36814465afbb656ccf 102901 +Kocher2021 2021 10.1126/science.abi5658 VAR021 ENA PRJEB45699 ERS6597874 VAR021.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 42 ERR6053706 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053706/ERR6053706.fastq.gz 3d0e6ce51335e1ee4a4563b48c4b285e 1461 +Kocher2021 2021 10.1126/science.abi5658 VLI016 ENA PRJEB45699 ERS6597875 VLI016.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 257 ERR6053707 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/007/ERR6053707/ERR6053707.fastq.gz 81feb844e7da1e555e0594ed03f2b5bf 14349 +Kocher2021 2021 10.1126/science.abi5658 VLI060 ENA PRJEB45699 ERS6597876 VLI060.B0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 786 ERR6053708 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/008/ERR6053708/ERR6053708.fastq.gz 2a2c0ddc10b4f496aa6a9221f3da9a92 24670 +Kocher2021 2021 10.1126/science.abi5658 VTZ008 ENA PRJEB45699 ERS6597877 VTZ008.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 350 ERR6053709 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/009/ERR6053709/ERR6053709.fastq.gz 8a7d6e0a0d9926ca18311298a517cd2c 12820 +Kocher2021 2021 10.1126/science.abi5658 VTZ011 ENA PRJEB45699 ERS6597878 VTZ011.A0101 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 2312 ERR6053710 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/000/ERR6053710/ERR6053710.fastq.gz ab1ba4203a811ae69a1589e00bd0fcd0 76359 +Kocher2021 2021 10.1126/science.abi5658 WEH008 ENA PRJEB45699 ERS6597879 WEH008.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 917 ERR6053711 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6053711/ERR6053711.fastq.gz 982c8356dcba87f9d85b30c1f04f8bd2 22857 +Kocher2021 2021 10.1126/science.abi5658 WEH009 ENA PRJEB45699 ERS6597880 WEH009.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 3244 ERR6053712 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/002/ERR6053712/ERR6053712.fastq.gz f3c121103cf4f7a85ccae86c3e0f9a0a 79921 +Kocher2021 2021 10.1126/science.abi5658 WSN010 ENA PRJEB45699 ERS6597881 WSN010.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 38 ERR6053713 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/003/ERR6053713/ERR6053713.fastq.gz efe3b5988d7a6c1eb45759989e9ef398 1677 +Kocher2021 2021 10.1126/science.abi5658 WSN012 ENA PRJEB45699 ERS6597882 WSN012.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 370 ERR6053714 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/004/ERR6053714/ERR6053714.fastq.gz 817da88d92b341dcb9af19572e8e3cd5 12574 +Kocher2021 2021 10.1126/science.abi5658 YUN048 ENA PRJEB45699 ERS6597883 YUN048.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 824 ERR6053715 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/005/ERR6053715/ERR6053715.fastq.gz c23a572be7e3657e70dad51e616265c1 24030 +Kocher2021 2021 10.1126/science.abi5658 ZWE008 ENA PRJEB45699 ERS6597884 ZWE008.A0102 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 3570 ERR6053716 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/006/ERR6053716/ERR6053716.fastq.gz f3b0a5e471bd5bfb31f1f13ecf692a3c 161027 +KrauseKyora2018 2018 10.7554/eLife.36666 Karsdorf ENA PRJEB24921 ERS2200179 IL235-Kars_537_M.NA double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 386780892 ERR2299807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/007/ERR2299807/ERR2299807.fastq.gz e5627496b0d6a6f5d78a11fb20249f8c 12253917998 +KrauseKyora2018 2018 10.7554/eLife.36666 Sorsum ENA PRJEB24921 ERS2200180 KH170066.halfUDG.shotgun double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 367574767 ERR2299808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/008/ERR2299808/ERR2299808.fastq.gz 30fc629fe055fef51ea2f5f6eff29454 11735270987 +KrauseKyora2018 2018 10.7554/eLife.36666 Petersberg ENA PRJEB24921 ERS2200178 KH150005.halfUDG.NA double Phusion Hot Start High-Fidelity DNA half-udg Illumina HiSeq 4000 SINGLE WGS 419413082 ERR2299806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR229/006/ERR2299806/ERR2299806.fastq.gz 23ffc9b98d5b57136929a67112079db7 14039216437 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 BEL024 SRA PRJNA721828 SRS9825982 BEL024-1-191126-ML4-I-PE-P7-NextSeq500_S4_L001_R1_001 double HGS Taq Diamond none unspecified PAIRED WGS 24222239 SRR15512724 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/024/SRR15512724/SRR15512724_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/024/SRR15512724/SRR15512724_2.fastq.gz dac13d11985f2cd7d59a687927218b4c;4b74540af3585980773297020d1c2e78 1045813443;1082441105 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826037 TU594LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 13024659 SRR15512595 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512595/SRR15512595.fastq.gz 687d352b3a74ae3e557c0f2020d4be47 459188288 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826036 TU594bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 60428835 SRR15512596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512596/SRR15512596.fastq.gz 42136fd28a0ce0e232d876c7ea93920a 2070309008 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826036 TU594aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 58087240 SRR15512597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512597/SRR15512597.fastq.gz b6a957424e0e95aa8d10584182d05e19 1979729021 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Bergen SRA PRJNA721828 SRS9826038 TU594_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 8516797 SRR15512594 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512594/SRR15512594.fastq.gz 3317224bd1d6c199856651994b3ce510 295956644 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY023 SRA PRJNA721828 SRS9825983 CHRY023-1-191126-ML1-I-UDG-PE-P7-NextSeq500_S1_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15122665 SRR15512723 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/023/SRR15512723/SRR15512723_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/023/SRR15512723/SRR15512723_2.fastq.gz 036ffbd45195a4219b8e5952f5615958;7f3096785f73fc600c5f5c95b8b86ac0 520871996;545208145 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY023 SRA PRJNA721828 SRS9826045 CHRY023-1-200706-ML9-I-UDG-PE-P7-NS500_S10_L004_R2_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 11285398 SRR15512549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512549/SRR15512549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512549/SRR15512549_2.fastq.gz e2c2a877c6b39ec3a9daad559a604e0d;35dbae006dd092812244f67a03d9353a 441936123;463526923 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 CHRY044 SRA PRJNA721828 SRS9826047 CHRY044-1-200626-ML10-I-UDG-SE-P7-NS500_S8_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15625772 SRR15512532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512532/SRR15512532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512532/SRR15512532_2.fastq.gz 7c6c1d27aab36adf86e3ca5312c9743d;2fccae11b039ec65686a317b49692652 658191651;703282995 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190719.A-Lane_10_TU1084LeprosyCapture_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 43686576 SRR15512687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512687/SRR15512687_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512687/SRR15512687_2.fastq.gz 3fae2596a9289a41a04b81e860e3319f;0cb5c787d74346ef90c815eca04400d3 1796671126;1907215670 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190314.A-Lane_9_TU1084LepCapturePortugal_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 113182 SRR15512688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512688/SRR15512688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512688/SRR15512688_2.fastq.gz 74f9c541279637f0d02f9cbca8d6dd3e;cb6858e052dab2e7b875dd24ce92c48d 3849086;4445967 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826000 20190314.A-Lane_9_TU1083LepCapturePortugal_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 200162 SRR15512690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512690/SRR15512690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512690/SRR15512690_2.fastq.gz f9b483544bd3b4540c408507841ab616;ccdabae82d001e72c30f3f7b4854fe19 6970576;8134258 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 27188837 SRR15512684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512684/SRR15512684_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512684/SRR15512684_2.fastq.gz b7d5a273fa8f15efe821200e420255d3;6be85fd60b56dccd5b23a492024d9d57 1166576320;1221496496 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 25568707 SRR15512685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512685/SRR15512685_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512685/SRR15512685_2.fastq.gz 1f5fbaac3d43b0e509c5b3ddb6fa0244;080c9f6d66c7780fa8dda0560fdf43fb 1102451158;1153651846 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 COR_XVIII SRA PRJNA721828 SRS9826002 20191017.A-Lane_34_TU1084UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 27745734 SRR15512686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512686/SRR15512686_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512686/SRR15512686_2.fastq.gz 2dcd1eaaccb5bd7b5889051ab7de3624;2b89aa2b37084208def66ae33f52dbe6 1186492498;1241136372 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 EDI006 SRA PRJNA721828 SRS9826051 EDI006.A0101.ML1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 16115791 SRR15512521 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/021/SRR15512521/SRR15512521_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/021/SRR15512521/SRR15512521_2.fastq.gz dcbd334f06a693d67d0b1d072ad2f973;9bb9411d49fbbe05ef91f3e558461932 596404715;689453503 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 JDS097 SRA PRJNA721828 SRS9826001 JDS097-1-200626-ML11-I-UDG-SE-P7-NS500_S9_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14530542 SRR15512689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512689/SRR15512689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512689/SRR15512689_2.fastq.gz 763f50ffaf28b6f7ad6b2066cd031d8d;cc647416a70bcb9c3e9801851fdf33fa 597249141;625816336 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU940_XXX001.A18330.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2477927 SRR15512522 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/022/SRR15512522/SRR15512522_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/022/SRR15512522/SRR15512522_2.fastq.gz 44370fcda113d5810cf4d28683fda2ce;a1f5b3f117d1e518a552d1ca6e31fa80 67763229;77423253 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU942_XXX001.A18332.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2976051 SRR15512693 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/093/SRR15512693/SRR15512693_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/093/SRR15512693/SRR15512693_2.fastq.gz d26788e8213c9628624d2bf1e7951387;676cf91c0ab1fd7157a6eb12f3e2c030 80029548;91748548 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825997 TU941_XXX001.A18331.SG1.1_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2781548 SRR15512695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512695/SRR15512695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/095/SRR15512695/SRR15512695_2.fastq.gz 80f375219ada608e277b3258ed70c4b2;69feebbb593e7c5e25d099dcec102bf6 73581030;84818958 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGa_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 4417786 SRR15512519 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/019/SRR15512519/SRR15512519_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/019/SRR15512519/SRR15512519_2.fastq.gz b5fcf572c059e5d780a54694af32e2ca;9c18228c69ba2f2fc9d0db672a80337e 136564924;145650939 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGc_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 31056166 SRR15512696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512696/SRR15512696_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/096/SRR15512696/SRR15512696_2.fastq.gz 57ef269d4dbe538c10783f723123a9ee;67a87e8fe5080ba29916768c0cf20278 1190339420;1265288335 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825996 20190719.A-Lane_10_TU940UDGb_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 17176698 SRR15512697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512697/SRR15512697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/097/SRR15512697/SRR15512697_2.fastq.gz 4ca9e240db39549ce00c005e20f5b1ba;c40ffb63304d09bb4f9751f500fc6df7 686449807;730674733 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU940ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2439503 SRR15512520 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/020/SRR15512520/SRR15512520_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/020/SRR15512520/SRR15512520_2.fastq.gz 1e18a55302c93b78f60d161aa2bc7727;8447c65616c1b803f667c43eb2caa5cc 67076466;72118907 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU942ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2828828 SRR15512692 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512692/SRR15512692_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512692/SRR15512692_2.fastq.gz 17710d30cdb73642d6dc99078a0345aa;e6b4e3991c96b26c2ce5bbeee09e0a5b 75957372;82102756 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 KirkHill SRA PRJNA721828 SRS9825998 TU941ScottlandLepraPhilippeSG_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3121280 SRR15512694 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512694/SRR15512694_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/094/SRR15512694/SRR15512694_2.fastq.gz 347664586fe13a768710acdad903dc7f;ea45b04fe96bc193a3f6bda91d42ef18 82410349;89481413 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU527_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 3699509 SRR15512575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/075/SRR15512575/SRR15512575.fastq.gz 02bb7bb27d147582e9c60b1ff4a8f5a5 121420453 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU527LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 982734 SRR15512576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/076/SRR15512576/SRR15512576.fastq.gz d766299ea300e31272c52b6be911ba93 33230176 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 4150035 SRR15512578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/078/SRR15512578/SRR15512578.fastq.gz 40551fa48c91111e67dbfd79482d105b 132755863 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526LperosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 1302846 SRR15512579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/079/SRR15512579/SRR15512579.fastq.gz a1da3e4ac4e155672b04a83a9fc04a82 43628073 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526C double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 56772741 SRR15512580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/080/SRR15512580/SRR15512580.fastq.gz d61b466b82cb9400185da9ea915c0813 1850754467 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 TU526B double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 23837107 SRR15512583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512583/SRR15512583.fastq.gz 2e3615133f18ca554c557b5703093cd7 748911660 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 6077219 SRR15512585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/085/SRR15512585/SRR15512585.fastq.gz 67cc201d654855665ff1420665a73b4c 196363706 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 3307095 SRR15512586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/086/SRR15512586/SRR15512586.fastq.gz 9ded477de6d5c98167305d3233d5bbd0 108102813 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 24607865 SRR15512587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/087/SRR15512587/SRR15512587.fastq.gz ccad4c3ab5a450981b052b3a03da42d4 806425731 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526C1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 22780562 SRR15512588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/088/SRR15512588/SRR15512588.fastq.gz bf0373fa4d75fecaa50bcf18c0e720cb 736944774 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 5286152 SRR15512589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/089/SRR15512589/SRR15512589.fastq.gz 8bc829276b12395083775ac5f586184b 165371151 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 38171 SRR15512590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/090/SRR15512590/SRR15512590.fastq.gz b4e9f951f4fdd21752facb388742e987 1051912 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 10705138 SRR15512591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/091/SRR15512591/SRR15512591.fastq.gz 90c01ba445aa069806734f10962aef22 336835013 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826040 526B1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 7807646 SRR15512592 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/092/SRR15512592/SRR15512592.fastq.gz 5304139dd3a5228294508d34d581647d 244531474 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU527bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 16794139 SRR15512577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/077/SRR15512577/SRR15512577.fastq.gz c056ede4a4dc523f0c1260d4ec831214 561917540 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU526bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 9263024 SRR15512581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/081/SRR15512581/SRR15512581.fastq.gz 52d12b5da82f056c92a2acf31c1f03d9 301092713 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 PAVd09_I.5 SRA PRJNA721828 SRS9826041 TU526aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 8356398 SRR15512584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/084/SRR15512584/SRR15512584.fastq.gz c19b4f69c54ffae27f92a2d7f7d35967 272507406 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11_S2_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 12049622 SRR15512542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512542/SRR15512542_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512542/SRR15512542_2.fastq.gz f975d8eafa9617b7355abd9d1df37c76;fa36aa061eccae3071092212e9baf44c 518496860;492223847 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11LeprosyCapture_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE Targeted-Capture 2475311 SRR15512559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512559/SRR15512559.fastq.gz 5c3dbdf7eb9efdb600ca15c5287a7acf 85550047 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11Lep_S0_L007_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 2080239 SRR15512561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512561/SRR15512561.fastq.gz 7265da31167729e19f6be3ec449ed11c 72396666 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11B double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 83673115 SRR15512563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512563/SRR15512563.fastq.gz 0770e4ea9931587b9ad4e639878b8ba0 2485664202 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11_S0_L006_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 4702986 SRR15512565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/065/SRR15512565/SRR15512565.fastq.gz a52062264d2359c741a3e128449c47c7 191136313 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B4_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 23407885 SRR15512566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/066/SRR15512566/SRR15512566.fastq.gz 9806060e176988fbbd2f6cca4d79a044 695199556 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B3_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 12123292 SRR15512567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/067/SRR15512567/SRR15512567.fastq.gz 915df22b947efe399edf6a63cbe0238d 358801447 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B2_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 25276936 SRR15512568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/068/SRR15512568/SRR15512568.fastq.gz c3dc114a9f4c5a510468320205fe59e6 748383811 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 11B1_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified SINGLE WGS 22865002 SRR15512569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/069/SRR15512569/SRR15512569.fastq.gz e12523018ab59e819cec874c1a4a9b72 680357158 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826004 TU11lep_S0_L002_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 3227559 SRR15512682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/082/SRR15512682/SRR15512682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/082/SRR15512682/SRR15512682_2.fastq.gz 6724e793e58871e37d5ba1d929479108;95063f240ee6bb882d560770c285e2cb 151065238;174543984 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826044 TU11bUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 9769364 SRR15512562 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512562/SRR15512562.fastq.gz 2c6ada53f48812620ba91f4c1f592e6e 320634217 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826044 TU11aUDGLA_S0_L001_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified SINGLE Targeted-Capture 13080236 SRR15512564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512564/SRR15512564.fastq.gz 45baa6e43a94796eebc8d822117473b7 421646799 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 R7546-671 SRA PRJNA721828 SRS9826003 TU11_S0_L003_R1_001 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6489853 SRR15512683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512683/SRR15512683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/083/SRR15512683/SRR15512683_2.fastq.gz f8eaf27552b9de5747f0759f631961b3;0a42c377db46ba8e7cc1c2b4bf67c99c 253336865;267960712 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826023 20201023.A-ZH1119_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 16393711 SRR15512636 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/036/SRR15512636/SRR15512636_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/036/SRR15512636/SRR15512636_2.fastq.gz 6a0e089903460e90e9ee9b958598eb5c;3035c62deae8671ef8320fe3677846c1 615273933;633143446 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826023 20201023.A-ZH1108_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED Targeted-Capture 12324903 SRR15512637 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/037/SRR15512637/SRR15512637_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/037/SRR15512637/SRR15512637_2.fastq.gz 6e067f8f720d411c8bc07d0109b91711;14c6ab689871e41620486b292af5126c 468280884;494721120 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG3_S25_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6068 SRR15512638 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/038/SRR15512638/SRR15512638_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/038/SRR15512638/SRR15512638_2.fastq.gz c1eb0af933cc639e69a8b3a74c171de4;072a243289fd7b05385104c958aa01fc 289249;294722 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG2_S24_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 3869 SRR15512639 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/039/SRR15512639/SRR15512639_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/039/SRR15512639/SRR15512639_2.fastq.gz 12f4f4b9aea059ce785dae0732a5a6e7;5cd65d8bb1b55147eb291e90b87d5bc5 181812;188551 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF101 SRA PRJNA721828 SRS9826022 20200907.X-Lane54_ZH1119_UDG1_S23_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 3306 SRR15512640 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/040/SRR15512640/SRR15512640_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/040/SRR15512640/SRR15512640_2.fastq.gz f16c1bd6866ec3bb0530b0f1f1043d13;45938ecf9a16130285779852eae36ed2 150608;155468 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826014 20190516.A-Lane_17_TU1173_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3412962 SRR15512654 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/054/SRR15512654/SRR15512654_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/054/SRR15512654/SRR15512654_2.fastq.gz db579430e539302ad573bfef603e1723;d46bb266fe0a6e7c05810b783f3f5a7b 164806130;170372872 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826014 20190516.A-Lane_17_TU1172_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2800635 SRR15512659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512659/SRR15512659_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/059/SRR15512659/SRR15512659_2.fastq.gz 50d7cff0b6f1770247d9f8975a1df3ba;032cbf01a1128cdc29109014fac740fe 136393267;140076170 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 24830 SRR15512655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/055/SRR15512655/SRR15512655_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/055/SRR15512655/SRR15512655_2.fastq.gz 50aad8f0195ed89b54e3463e8498cd2f;9e111d8ca2ddd639907a17093e0baf5c 1046004;1142912 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 12693866 SRR15512657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/057/SRR15512657/SRR15512657_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/057/SRR15512657/SRR15512657_2.fastq.gz 7a87dcaaa6db650047d8c926b7e903b8;cdcef1e4af73b0fcf12c9380052c89ae 551688346;567650222 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF11 SRA PRJNA721828 SRS9826015 20191017.A-Lane_34_TU1172UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5019250 SRR15512658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/058/SRR15512658/SRR15512658_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/058/SRR15512658/SRR15512658_2.fastq.gz 097fa14c0c185a2db16e119c6779bc37;117d39390d2ce1a8bd64dded54060059 227286509;232649254 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826017 20190516.A-Lane_17_TU1171_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3728851 SRR15512651 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/051/SRR15512651/SRR15512651_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/051/SRR15512651/SRR15512651_2.fastq.gz 287c11046ec0fe42b749cdddd1a9ac7a;5b5a83c26c4f1b54a39644fa6c10d612 182427856;185739427 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826017 20190516.A-Lane_17_TU1170_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3055068 SRR15512652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/052/SRR15512652/SRR15512652_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/052/SRR15512652/SRR15512652_2.fastq.gz a8f206eaab4dc8d301284235cc5cde6b;02443f939485d2cfe67aba8ff4d81a3f 148497514;153620987 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6014995 SRR15512648 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/048/SRR15512648/SRR15512648_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/048/SRR15512648/SRR15512648_2.fastq.gz 4e72c724ebfa8642901804953cfec27d;0732b7ea2efced337d70c663e87568a7 248803198;255871706 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6138019 SRR15512649 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512649/SRR15512649_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/049/SRR15512649/SRR15512649_2.fastq.gz b98fb83487efcee6543238369f369002;f74eae7f2d848d8c7bbaf120706fea95 278068824;280464918 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF21 SRA PRJNA721828 SRS9826018 20191017.A-Lane_34_TU1171UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9853149 SRR15512650 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/050/SRR15512650/SRR15512650_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/050/SRR15512650/SRR15512650_2.fastq.gz 353a73679d6e131507049d2863cdf4d2;f44591811b9370b76b820b1061c8839d 418003976;431013594 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826019 20190516.A-Lane_17_TU1167_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3274860 SRR15512642 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512642/SRR15512642_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/042/SRR15512642/SRR15512642_2.fastq.gz 4211f104f6e5e5b6a0d19920d13951a6;96aeebbea1e9c294a0daede95c5b2c6f 155984268;160737638 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826019 20190516.A-Lane_17_TU1166_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2841263 SRR15512647 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/047/SRR15512647/SRR15512647_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/047/SRR15512647/SRR15512647_2.fastq.gz 3e75ec96e879255c1c588eac0370eb16;2cec4aa0e47755f1b30c48656b298787 136229055;142791271 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14836030 SRR15512643 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/043/SRR15512643/SRR15512643_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/043/SRR15512643/SRR15512643_2.fastq.gz 384cec68ecabcb1fce7c397027a24219;be3f6b0be8d05e4e24c6012856dc886e 618234836;651882251 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 4090725 SRR15512644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/044/SRR15512644/SRR15512644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/044/SRR15512644/SRR15512644_2.fastq.gz 9dd59de030247bd6c28a045207c5e643;0c6512069874039843415e3a6a83924e 162525493;172435257 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF25 SRA PRJNA721828 SRS9826020 20191017.A-Lane_34_TU1166UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9178172 SRR15512646 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/046/SRR15512646/SRR15512646_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/046/SRR15512646/SRR15512646_2.fastq.gz e71d0fbb401ec37a274993aed8a811f1;d2b766a022ce30f28bf0ff6063a58545 369282315;394715445 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825989 20201023.A-ZH1114_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 6722946 SRR15512713 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512713/SRR15512713_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512713/SRR15512713_2.fastq.gz a1ee9083fe79c66b2d089085e81adbf7;875e92246047ea50e86fc88476628ef1 252642664;260471407 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825989 20201023.A-ZH1113_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 10291264 SRR15512714 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512714/SRR15512714_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512714/SRR15512714_2.fastq.gz bb605db02eef03b6f0133811efe4939d;3b8d1b4dc48433913db60ff81741d715 381760710;394756043 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG3_S22_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 2036 SRR15512715 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/015/SRR15512715/SRR15512715_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/015/SRR15512715/SRR15512715_2.fastq.gz 7154860ba05cee957d425b5f5b82c5e4;85816b2493895057725e04e38f20adfa 98856;100158 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG2_S21_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 2271 SRR15512716 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512716/SRR15512716_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512716/SRR15512716_2.fastq.gz 1504873a70186f0a789907c77e87e29a;0137b2c4edb9f55e7a3badc98cd271af 109384;112056 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF700 SRA PRJNA721828 SRS9825988 20200907.X-Lane54_ZH1114_UDG1_S20_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 1580 SRR15512717 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512717/SRR15512717_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512717/SRR15512717_2.fastq.gz 073a5b5ade4e0584924c2ca471481138;4ba57f8b7366bd00a4fb2e369b558724 77536;79027 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825992 20190516.A-Lane_17_TU1158_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3303744 SRR15512701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/001/SRR15512701/SRR15512701_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/001/SRR15512701/SRR15512701_2.fastq.gz 01be822609002d240030a9e518d6e45b;2ee04acf1e4c2621bd29f1bd5ef7ccdc 163374036;166126749 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825992 20190516.A-Lane_17_TU1157_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 3698387 SRR15512705 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/005/SRR15512705/SRR15512705_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/005/SRR15512705/SRR15512705_2.fastq.gz 5955c9fcc876270c0b68a4d2d087ca42;a1129046274a67f16caa9e11004d240a 173898353;178217777 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 8450039 SRR15512702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/002/SRR15512702/SRR15512702_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/002/SRR15512702/SRR15512702_2.fastq.gz 758e20c364251263ab9a38e367dd7bb8;37d83e175cee4586c9ecc373f94ff61b 358789954;369429069 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9994861 SRR15512703 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/003/SRR15512703/SRR15512703_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/003/SRR15512703/SRR15512703_2.fastq.gz 3abd0ef2852c53112405e3526c0dd99f;4c615e3fe5b0711a5b3e362ccfe4594f 413914579;429685661 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF703 SRA PRJNA721828 SRS9825993 20191017.A-Lane_34_TU1157UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 6562846 SRR15512704 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/004/SRR15512704/SRR15512704_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/004/SRR15512704/SRR15512704_2.fastq.gz 3a7aca5732ffdda90b5adda3588a0026;7bedcdc4b2ede43f793a865b28ef9ad0 275965657;281553783 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826012 20190516.A-Lane_17_TU1169_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2153032 SRR15512660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/060/SRR15512660/SRR15512660_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/060/SRR15512660/SRR15512660_2.fastq.gz 882ac257670306f89b9324cae868c595;6d663beeec1edb649df14cca4ed1d266 102944265;107735506 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826012 20190516.A-Lane_17_TU1168_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 1881317 SRR15512664 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512664/SRR15512664_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/064/SRR15512664/SRR15512664_2.fastq.gz 317dd8af565ac0ea16bf3cd6ce26e8a0;264c2747aabbf75c42226dc2f1868935 90078305;97157931 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 13067069 SRR15512661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512661/SRR15512661_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/061/SRR15512661/SRR15512661_2.fastq.gz 6bbd796407ed11830097cff4db60697e;f4feafdfa37f776f4a4546bd44df6e31 549962434;566733896 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5655426 SRR15512662 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512662/SRR15512662_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/062/SRR15512662/SRR15512662_2.fastq.gz b188166e06d4b59c5d47401d5d9e887f;291cad3d396acfe69c1a06f3d8b3a4d1 235706205;241710276 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF8 SRA PRJNA721828 SRS9826013 20191017.A-Lane_34_TU1168UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 5931825 SRR15512663 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512663/SRR15512663_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/063/SRR15512663/SRR15512663_2.fastq.gz c029883a0cfe5269317ed2179f12052a;0437e04238ba1a2f68d45795b9092bc6 236298937;245547031 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9826024 20201023.A-ZH1112_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 4247976 SRR15512627 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/027/SRR15512627/SRR15512627_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/027/SRR15512627/SRR15512627_2.fastq.gz c06f7db9bd573fdc15aa982f4ce01c14;ed102e217f0f3f9518d1cf0dd3262fc1 153587338;160800656 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9826024 20201023.A-ZH1111_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 11454793 SRR15512628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/028/SRR15512628/SRR15512628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/028/SRR15512628/SRR15512628_2.fastq.gz 02fa139f8578e1e4f112a2ede55efd3b;9b1e586bb75b1bc40c0bd9db048242d4 419077575;429445937 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1112_UDG2_TTACTTCT_CCTCGATA_S3_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 20775643 SRR15512629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/029/SRR15512629/SRR15512629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/029/SRR15512629/SRR15512629_2.fastq.gz e906c46ed3337c3b90b3992e12831a94;a87520ce136b87389faf8807f7d7a00c 781391061;814614681 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1112_UDG2_S21_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 293036 SRR15512630 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/030/SRR15512630/SRR15512630_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/030/SRR15512630/SRR15512630_2.fastq.gz caead9938ca81cfc8a32947cffeaee6f;a210d1510faa249ad3287f8f5f1f9ffd 11563389;12159549 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1112_UDG1_TTGGCAGA_AACCAACG_S4_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 18280330 SRR15512631 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/031/SRR15512631/SRR15512631_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/031/SRR15512631/SRR15512631_2.fastq.gz 0500446a7d72cbe3fceeeafa93a2edbd;98f0ba9f50b9f5de04cad0979c44f669 695852501;754810450 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1112_UDG1_S20_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 266369 SRR15512632 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512632/SRR15512632_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/032/SRR15512632/SRR15512632_2.fastq.gz 25b68ca5123c307f92c31f246cb56537;0cd7b6057f9673b254d7403990b12f9c 10614592;11643853 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1111_UDG2_TGGTCCTG_CGAGAGTT_S2_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 24111899 SRR15512633 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/033/SRR15512633/SRR15512633_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/033/SRR15512633/SRR15512633_2.fastq.gz da48c20d9e748fa1030f354c5f6257cd;2385e96be9129d0e8e245dd4f59f2188 953909643;984799760 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1111_UDG2_S19_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 338632 SRR15512634 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/034/SRR15512634/SRR15512634_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/034/SRR15512634/SRR15512634_2.fastq.gz 0885f5240449afa825de343bd191a3b3;7036774a9154a1340060149e931f07b5 13904591;14489598 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 ZH1111_UDG1_TGGTAATT_TGGTAGTC_S1_R1_001 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 25135710 SRR15512698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/098/SRR15512698/SRR15512698_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/098/SRR15512698/SRR15512698_2.fastq.gz 004b1a012880bfbc6d85d3bf8503afcb;fc62c31ec5d583ece13b9e0497eed782 967857613;1006452562 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF800 SRA PRJNA721828 SRS9825995 20200901.A-Lane53_ZH1111_UDG1_S18_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 354734 SRR15512699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/099/SRR15512699/SRR15512699_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/099/SRR15512699/SRR15512699_2.fastq.gz 770ded5a982b1b9f0a23dfde6df277b1;810298bdd4db630d0a8a67e8aa54be67 14212447;14922107 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826029 20190516.A-Lane_17_TU1160_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2556961 SRR15512612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/012/SRR15512612/SRR15512612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/012/SRR15512612/SRR15512612_2.fastq.gz f90724086cecc915586f226009918b68;1335065af0becb69fd304934e6cca14a 121369790;125650969 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826029 20190516.A-Lane_17_TU1159_SNA_R1 double PfuTurbo Cx Hotstart DNA none unspecified PAIRED WGS 2270716 SRR15512617 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512617/SRR15512617_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/017/SRR15512617/SRR15512617_2.fastq.gz 202b20a5e272285dd5fa82044a988613;d93fd9ea22c7d6a1aaa94d3822121339 109438676;113039908 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 10498778 SRR15512609 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/009/SRR15512609/SRR15512609_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/009/SRR15512609/SRR15512609_2.fastq.gz 725dea7227d8b571a58b6ce73fcef191;a527b7af25e5b409450f108ad8a309f5 475416046;493399613 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 9112084 SRR15512610 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/010/SRR15512610/SRR15512610_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/010/SRR15512610/SRR15512610_2.fastq.gz 52916bbdd16aa17fcfc41d7de30f2f3c;6bb666764eea6d4a3ffc0833e9f5ab47 388859655;406423184 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1160UDGLib1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 18127984 SRR15512611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/011/SRR15512611/SRR15512611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/011/SRR15512611/SRR15512611_2.fastq.gz 5f807944b9781f80960612d1aa10100a;acf85d157c9c19b85456938c84108543 814415698;849046249 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL3_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 16522459 SRR15512613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512613/SRR15512613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/013/SRR15512613/SRR15512613_2.fastq.gz dc4cf59f753cc050486e35afb76ea15b;1d14ba0d322f9179739707edad2765eb 736891563;767539808 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL2_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 14188709 SRR15512614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512614/SRR15512614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/014/SRR15512614/SRR15512614_2.fastq.gz 7db265def38bb2b35bab0403ea6294ad;e406e13c994dc1903d399ae4ba9183fd 641798617;687185776 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 UF803 SRA PRJNA721828 SRS9826030 20191017.A-Lane_34_TU1159UDGL1_SNA_R1 double PfuTurbo Cx Hotstart DNA full-udg unspecified PAIRED Targeted-Capture 15369171 SRR15512616 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512616/SRR15512616_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR155/016/SRR15512616/SRR15512616_2.fastq.gz 5667c84e73631d5654900c888d3daf10;a6f8b88c7edebc36d5b073ca138f448e 684584767;735771282 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 28876018 ERR8958741 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958741/ERR8958741_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958741/ERR8958741_2.fastq.gz fb6b01c64a79ff4f6bc4a6da2d8bbf37;91589691b93ca920595f4997941472d6 492904219;519409908 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20054538 ERR8958742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958742/ERR8958742_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958742/ERR8958742_2.fastq.gz 83794e3d585cecadf221eb7da0da54f2;f8f7067f6526d6b174bf17ca4a030ecf 357395694;380626259 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24713886 ERR8958743 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958743/ERR8958743_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958743/ERR8958743_2.fastq.gz 5d7b5424d6dd3d47f53b0e86fa7720a8;45a563d5c023a8eaa696afe820231df9 412963924;433351173 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 36550342 ERR8958744 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958744/ERR8958744_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958744/ERR8958744_2.fastq.gz 320eaf2711d7ea39968cedf16b32d436;9ccf43923bff77e15db2599f5f1ab506 576503895;605303015 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 ARS007 ENA PRJEB51099 ERS10777178 ARS007.B0104 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 15253454 ERR8958745 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958745/ERR8958745_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958745/ERR8958745_2.fastq.gz 36178eb417a6de3790b8a0a0e5dbec1b;32919cfd708d0567114daf77d73be52d 248237096;258470309 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 29442670 ERR8958746 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958746/ERR8958746_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958746/ERR8958746_2.fastq.gz 6a5238a929d7d5f0d61e149a052f32a6;5cc30efb7b1ac5c8dd291ee8abdc800f 499848154;510867830 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0103 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22716298 ERR8958747 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958747/ERR8958747_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958747/ERR8958747_2.fastq.gz 949cd0959100790612e0bfd8614777d1;ac5c08e7948ece79ae9aeb301e3aed9d 343090912;353549427 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 CHC004 ENA PRJEB51099 ERS10777170 CHC004.A0104 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 19784314 ERR8958748 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958748/ERR8958748_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958748/ERR8958748_2.fastq.gz 4ea625c8dfd14c4c714b4593cbb72ae1;4c5e0c1537f3afaf48accdabeb3b2e17 321844977;333645015 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 GRS004 ENA PRJEB51099 ERS10777166 GRS004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20634126 ERR8958749 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958749/ERR8958749_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958749/ERR8958749_2.fastq.gz 5169684d19059bb40dca683d60f286ee;d453b508eedce749b873985b32345c36 335329463;341266169 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23517728 ERR8958750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958750/ERR8958750_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958750/ERR8958750_2.fastq.gz e1bb80a3c1d1bef3d576a499709e368e;0b366c8acad5a101093a45fea4ffb980 372333212;380513957 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7415860 ERR8958751 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958751/ERR8958751_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958751/ERR8958751_2.fastq.gz f9c1b4762e18acd2cb2ecb7f3714d75d;69a1eee974c2581058cea96c3cab4f0a 132671262;133218681 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6865106 ERR8958752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958752/ERR8958752_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958752/ERR8958752_2.fastq.gz ab6e38eb5661177bc8a214a9f81404a8;64700c9d12b1941d566573ab9db256eb 122173681;122880444 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7466930 ERR8958753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958753/ERR8958753_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958753/ERR8958753_2.fastq.gz fe8054a4ed40a36ce16346edd8761d04;7f6ac7c892cae3035f38d65b1bdc19a4 132767458;134776372 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP001 ENA PRJEB51099 ERS10777167 HOP001.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7283934 ERR8958754 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958754/ERR8958754_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958754/ERR8958754_2.fastq.gz 9df513ec93961c4a76eca0e1a0026d96;4ab75ea3071ec49d3ac0200524107f54 129976884;132293549 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7310936 ERR8958755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958755/ERR8958755_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958755/ERR8958755_2.fastq.gz b6d8be62b8cce6660e457c1b107bdb13;527c405657b8068aa21836094f08b90a 127164933;133475599 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 26111934 ERR8958756 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958756/ERR8958756_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958756/ERR8958756_2.fastq.gz 6b7a4444f006cc8094a513cffc57d2a2;fc7e0931260978d89b54c6703d34d3b2 437564462;455298409 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7367942 ERR8958757 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958757/ERR8958757_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958757/ERR8958757_2.fastq.gz ea69ddabaa2d40a93dfd16e157a83d3d;8a2470adb920d9fb74b4cdffb7eb41ee 139893787;141546069 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6844112 ERR8958758 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958758/ERR8958758_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958758/ERR8958758_2.fastq.gz 40299e10a8e2b3ecc139c88f2e59ae6e;f70555fa0dea932921108392b1190fd1 129427920;131025297 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7451900 ERR8958759 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958759/ERR8958759_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958759/ERR8958759_2.fastq.gz 83d251d34be0e77fded560756479952f;5c4b3c75880b5b8f612940c63b5f1505 140839203;144089413 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 HOP004 ENA PRJEB51099 ERS10777168 HOP004.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7220638 ERR8958760 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958760/ERR8958760_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958760/ERR8958760_2.fastq.gz 841422777bafa2f2363b6138eda6ab16;89fe5606418128ccf96b5d22145777d9 137047724;140443758 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20080206 ERR8958761 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958761/ERR8958761_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958761/ERR8958761_2.fastq.gz 84f6ba8593a148ad7cdbcea92b06900c;043e37196eb5f6d0dce4975f751e7a73 384534868;408953448 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 28242528 ERR8958762 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958762/ERR8958762_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958762/ERR8958762_2.fastq.gz 29fc1357a5bbc23a21b859d39224f9fe;891c818b347d39b4e7ca83b2377e32c9 460969895;484144809 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 25216996 ERR8958763 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958763/ERR8958763_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958763/ERR8958763_2.fastq.gz fc35b4906103201bc3ea2f495287fd1b;4aa197a36fc950282b6a7bb9222095d3 439074246;465132587 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 18646814 ERR8958764 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958764/ERR8958764_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958764/ERR8958764_2.fastq.gz b5d2463bdb64f9d4cf66fd71908246fb;a4086e61df24ed249ec0b1d72e538e14 318205005;327114018 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24483462 ERR8958765 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958765/ERR8958765_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958765/ERR8958765_2.fastq.gz 1d5a2d8cebfb3968b469b2f9ee097581;baf27af8a054bd0afdba249e426f7ac1 470865727;497288903 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31782690 ERR8958766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958766/ERR8958766_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958766/ERR8958766_2.fastq.gz 9c9e7e78bbc59a4978fe1eaeadde4f20;ba1bd94ae1d98c1313f8824c3624717e 495945594;541498970 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KNK001 ENA PRJEB51099 ERS10777165 KNK001.A0201 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 25429992 ERR8958767 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958767/ERR8958767_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958767/ERR8958767_2.fastq.gz aafc69fb496bff9e59a09208192d39f3;149353a520639dfe8fc5212bfc6d676d 452111445;477368950 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KZL002 ENA PRJEB51099 ERS10777179 KZL002.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 24350346 ERR8958768 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958768/ERR8958768_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958768/ERR8958768_2.fastq.gz cfd8f456f5c6e34eef219a80a8036512;8dca4a07fa36889b3ddafa5db6ed589a 404950248;418469399 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KZL002 ENA PRJEB51099 ERS10777179 KZL002.A0102 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23416470 ERR8958769 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958769/ERR8958769_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958769/ERR8958769_2.fastq.gz 52f09d049aa5671c6a8171da3b21eed0;7fb7a7206271460e78c6519d9ba84364 389635284;398734827 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777172 MIB054.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22816694 ERR8958770 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958770/ERR8958770_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958770/ERR8958770_2.fastq.gz f4f082d5701342b6f773a0c178a386ff;e42bf738e95a442ae0dfab776dad9274 412099780;441082812 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 21089426 ERR8958771 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958771/ERR8958771_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958771/ERR8958771_2.fastq.gz 15c46d0e4fb081c9ae01720368701cfe;9882e9f7ae9954329bc5cc0f8ade8c48 399580379;415472643 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 27820024 ERR8958772 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958772/ERR8958772_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958772/ERR8958772_2.fastq.gz b014a7c083dddb8d7878ad215a4dfcef;be57f47d395290ddf3c6726e882841f0 509836910;536949682 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18956_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7201144 ERR8958773 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958773/ERR8958773_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958773/ERR8958773_2.fastq.gz 052f62c5e1c9d45d7abfe828681e26ef;a38b3b7ea76c0a0fc86aa818ee2e6e70 113767950;117338242 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18957_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7163666 ERR8958774 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958774/ERR8958774_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958774/ERR8958774_2.fastq.gz b27ee9a8c04c8527bb6387149dd94125;ee51d33d44e1213feede217887481808 114232043;119178345 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18958_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4951700 ERR8958775 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958775/ERR8958775_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958775/ERR8958775_2.fastq.gz 3581f1857a8d8fe2f812b7dd9ba8f5ab;31ca2289506419a767ed2c47be278aeb 78836668;82274230 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18959_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 4864020 ERR8958776 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958776/ERR8958776_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958776/ERR8958776_2.fastq.gz e883d2fe3fa252d05ce2841c99d18b2d;6a2f7ebd3f6034c12089388e8a5c41e7 77187807;81008583 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18960_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 9816730 ERR8958777 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958777/ERR8958777_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958777/ERR8958777_2.fastq.gz f1e3da952bf066a6bc82754cbe3facc7;d442ca438eebc39849fdfd926915a84d 154697855;162248108 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I2470 ENA PRJEB51099 ERS10777177 XXX001.A18961_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5838156 ERR8958778 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958778/ERR8958778_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958778/ERR8958778_2.fastq.gz fef1e9ae38530e3737748d20ca6f762b;8bcee84738a2f6f312184e8e97fc1b66 92912342;98450778 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18962_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7397302 ERR8958779 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958779/ERR8958779_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958779/ERR8958779_2.fastq.gz bedcf98eb820b87420c91b31cb78cf66;974d8efd7bc3c09b9d42f30aa12ec2d3 116325572;121916225 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18963_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6653730 ERR8958780 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958780/ERR8958780_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958780/ERR8958780_2.fastq.gz 7c4be487f778352503bc54c111f9edb2;19f6ba5a3f45eb993a449f18e2b2fef1 104687020;107176760 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18964_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7743068 ERR8958781 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958781/ERR8958781_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958781/ERR8958781_2.fastq.gz 51bf94581298d54e35f3c686121e8a77;394863b554f471aaab63dd62214606fd 121916100;126465610 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18965_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6086152 ERR8958782 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958782/ERR8958782_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958782/ERR8958782_2.fastq.gz dd0cb6ec6aaa72378728f18f503d1d21;9cf50394f638dec6098273975fa0e713 96277711;99527190 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18966_trimmed double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3721770 ERR8958783 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958783/ERR8958783_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958783/ERR8958783_2.fastq.gz ce21188868a2628c3afa8c868f36f6bb;c76e2ae2441c601ea934cc1f1031dd09 59180472;62176580 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18967_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 5294376 ERR8958784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958784/ERR8958784_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958784/ERR8958784_2.fastq.gz fc025d307047caf0cd583d6a68f56267;1001f86d0ac15865d45ebfcffb4decd0 82815236;85954911 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18968_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 6034900 ERR8958785 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958785/ERR8958785_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958785/ERR8958785_2.fastq.gz a51d170da88c95c0b1c9da4129791220;eba56bb98b6f16b2a26cce64bdff56f5 95111775;99928027 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18969_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 7682146 ERR8958786 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958786/ERR8958786_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958786/ERR8958786_2.fastq.gz 37f2373ae042bc1dc50c77d17b690407;a14ae32bc1b06474133d9be20c6131d1 120187125;126308998 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 I5884 ENA PRJEB51099 ERS10777163 XXX001.A18972_trimmed.YP2.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 13061698 ERR8958787 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958787/ERR8958787_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958787/ERR8958787_2.fastq.gz 10afa6ad9d1c91560d480c513758d3d8;03919c58c3d422bba2046eeedcb44a82 211715948;222503135 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6122276 ERR8958788 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958788/ERR8958788_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958788/ERR8958788_2.fastq.gz af6eb45e7278629c9f8c4d23974bdfa3;2a75ac5d86673a6f54d3947aaab6f11d 121767014;140972419 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5302840 ERR8958789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958789/ERR8958789_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958789/ERR8958789_2.fastq.gz c21a5ab337cc41f9c82a22134d3733cb;c7681a5e0637d644477fc093819e9382 104307330;122245357 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6399566 ERR8958790 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958790/ERR8958790_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958790/ERR8958790_2.fastq.gz f2a8e2f962fc099d0a4b63b68900ce60;b349d93c6751ba545dacf4183814a5e8 126793610;147498807 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777173 MIB054.C0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5687250 ERR8958791 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958791/ERR8958791_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958791/ERR8958791_2.fastq.gz 0afdaa77ad5b17447ba1e752058b45b8;2aa4d4795d8555c214d81b368bc3ee7c 112533015;131914486 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6703710 ERR8958792 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958792/ERR8958792_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958792/ERR8958792_2.fastq.gz 432cf2cfbf9cd27f8bc5233ff819ebba;cb51bde572c43fa5dca3ac167c0f831f 126103951;144411919 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5752622 ERR8958793 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958793/ERR8958793_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958793/ERR8958793_2.fastq.gz 28bdcc2709f0c08a775a6b0c6a84783d;ecd633180180b7a73360b2ac385f9aed 107217075;124231241 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 7013530 ERR8958794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958794/ERR8958794_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958794/ERR8958794_2.fastq.gz 49cb2ff8662feb99f97e3c6401d8cb2d;82a6b3709d8e3883ddc311fb458db4c2 131152659;150941251 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 MIB054 ENA PRJEB51099 ERS10777174 MIB054.D0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6173532 ERR8958795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958795/ERR8958795_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958795/ERR8958795_2.fastq.gz 849041022ba8d91924eba6d66a5dc293;3776b2ed87921c423eb36c6014856fab 115417775;133927301 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5854114 ERR8958796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958796/ERR8958796_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958796/ERR8958796_2.fastq.gz 458d8d51940ab364e88a50ea5aaf37ab;80995c424e0e3f14c0d5df792593b0fe 113239629;129990393 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4980244 ERR8958797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958797/ERR8958797_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/007/ERR8958797/ERR8958797_2.fastq.gz b1ba3eeb80779570f4188bb5fc69857c;e53b683b28294bc3dd9f59a12a8cd70f 95308580;110829407 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6119716 ERR8958798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958798/ERR8958798_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/008/ERR8958798/ERR8958798_2.fastq.gz aa91db5df39c6b2b92389abe374b0274;7223bef5972de00f4d6089ff40d32517 117622361;135747217 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 VLI092 ENA PRJEB51099 ERS10777164 VLI092.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5334900 ERR8958799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958799/ERR8958799_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/009/ERR8958799/ERR8958799_2.fastq.gz 61c039d5b75a88adc5432202f0f344d1;abaf8ef8692aa2285daa8007d6413e41 102567093;119274008 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLE031 ENA PRJEB51099 ERS10777171 KLE031.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 7052786 ERR8958800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/000/ERR8958800/ERR8958800.fastq.gz 41f09009eeaf716e9b0b16a6da639a5d 267898743 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLE048 ENA PRJEB51099 ERS10777175 KLE048.A0101 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 9937768 ERR8958801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/001/ERR8958801/ERR8958801.fastq.gz 81974d6b0077654cae414d7a34a8289f 369483736 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 KLZ001 ENA PRJEB51099 ERS10777169 KLZ001.A0101 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 21060311 ERR8958802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/002/ERR8958802/ERR8958802.fastq.gz 0e2eab00b0164f156c0a022ed34e108b 726962619 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 OOH003 ENA PRJEB51099 ERS10777176 OOH003.A0102 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 SINGLE Targeted-Capture 2859519 ERR8958803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/003/ERR8958803/ERR8958803.fastq.gz 5b3e3b1b330706b2e6f0b1f8216c3d41 100819346 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 OOH003 ENA PRJEB51099 ERS10777176 OOH003.A0103 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 19349232 ERR8958804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/004/ERR8958804/ERR8958804.fastq.gz a8a8599c37a2b7786d0fe7d15b280b31 625131667 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 GRH001 ENA PRJEB51099 ERS10777181 GRH001.A0202 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 13928892 ERR8958805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/005/ERR8958805/ERR8958805.fastq.gz f57f7160a11d3bab4faadf6ce7d07059 490241008 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 VEL003 ENA PRJEB51099 ERS10777180 VEL003.B0101 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 12441905 ERR8958806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR895/006/ERR8958806/ERR8958806.fastq.gz 371c79ddff5baa91a5cb7766d167f23a 359596973 +Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 SVK01_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 810269 SRR10010568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/068/SRR10010568/SRR10010568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/068/SRR10010568/SRR10010568_2.fastq.gz b77c65c2dc07f61661d7300ef1d5b025;981c381065af0ec4c9d1529f43428152 30813644;32693295 +Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 SVK01_2017-08ss single KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 4256252 SRR10010569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/069/SRR10010569/SRR10010569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/069/SRR10010569/SRR10010569_2.fastq.gz 2aafc58f7b355c6f04ae3669b0414c2b;7d95048832dd4c180d4bac83fc9a1de0 216792814;245578698 +Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1027699 SRR10010570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/070/SRR10010570/SRR10010570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/070/SRR10010570/SRR10010570_2.fastq.gz c8de1e0f007eb5d798f7de7d39ddfef5;316112d5b8a69768a011f9f588287b5b 52061368;54802649 +Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 36039199 SRR10010571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/071/SRR10010571/SRR10010571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/071/SRR10010571/SRR10010571_2.fastq.gz 323525ced3bfcc0fd15d61e9f9785f25;7558d827486a97dc355d69f87bb228a7 1609120451;1753741001 +Duggan2020 2020 10.1186/s13059-020-02079-z VK01 SRA PRJNA561155 SRS5298897 DVK01_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 3754544 SRR10010572 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/072/SRR10010572/SRR10010572_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/072/SRR10010572/SRR10010572_2.fastq.gz 66a611a73235587c4dd966ea448ccf3d;c54419ae0bc9836834e14fa49859db91 203901221;218508247 +Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 SVK02_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 721496 SRR10010573 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/073/SRR10010573/SRR10010573_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/073/SRR10010573/SRR10010573_2.fastq.gz 6a8a080279e22e5d1e608a42bec0fdd4;9e51094e1a844273dea90d9a81c750cf 27699227;29934574 +Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1037689 SRR10010574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/074/SRR10010574/SRR10010574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/074/SRR10010574/SRR10010574_2.fastq.gz a14e39b1306c76cf0e853f45614f4bc8;492ed6ec10f1c884768f036ef458f4e7 52286282;51869063 +Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 60932077 SRR10010575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/075/SRR10010575/SRR10010575_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/075/SRR10010575/SRR10010575_2.fastq.gz 41481e2181bed17a1f6162088e73039e;b736b720dba1676df12cf2189cb5b7a6 2703887417;2767173269 +Duggan2020 2020 10.1186/s13059-020-02079-z VK02 SRA PRJNA561155 SRS5298896 DVK02_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 1591335 SRR10010576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/076/SRR10010576/SRR10010576_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/076/SRR10010576/SRR10010576_2.fastq.gz 3d65ac1bd94f08b63b510a75cbe4fd8b;8227754107c914b85d5e0228099cad86 86436366;88520653 +Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 SVK05_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 450392 SRR10010577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/077/SRR10010577/SRR10010577_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/077/SRR10010577/SRR10010577_2.fastq.gz 6c67f1c9141a1fe3a37942ef79f44caa;a10717ee3e574c36f76ae203c80ed6b3 16647817;16987734 +Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2017-10 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 25679913 SRR10010578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/078/SRR10010578/SRR10010578_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/078/SRR10010578/SRR10010578_2.fastq.gz 0aef885a64d57b609c8998015846cbaa;3d1e0aa7817d566b9b449f40da6a6ed1 1127153201;1332208906 +Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 1664765 SRR10010579 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/079/SRR10010579/SRR10010579_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/079/SRR10010579/SRR10010579_2.fastq.gz ea4c12c22667d6c62ad18a6407137fe7;240b09e087aff94c6b4a0367d239bed8 90177817;97639654 +Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 SVK12_2017-07 single KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2843753 SRR10010580 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/080/SRR10010580/SRR10010580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/080/SRR10010580/SRR10010580_2.fastq.gz 362edbffa824ccb1d77a5f55ed524314;f44c86bc993db56db4295553f9a867f4 114431250;148091561 +Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 DVK12_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 682612 SRR10010581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/081/SRR10010581/SRR10010581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/081/SRR10010581/SRR10010581_2.fastq.gz 6174fee350c45ac4a0a7318e19227d2d;56b3a3c50d01284dd73d2173eda51205 33963837;35581491 +Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 DVK05_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 812001 SRR10010582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/082/SRR10010582/SRR10010582_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/082/SRR10010582/SRR10010582_2.fastq.gz ad9c4931b5cdba3cb041b4cb3c6718c8;12edf561bc794d149ff350e2eb748e0b 41018374;43169343 +Duggan2020 2020 10.1186/s13059-020-02079-z VK05 SRA PRJNA561155 SRS5298895 DVK05_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED Targeted-Capture 2808729 SRR10010583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/083/SRR10010583/SRR10010583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/083/SRR10010583/SRR10010583_2.fastq.gz 1d13745c7262c970798a93b3066d8bb8;0aed21dffdd5717529551e5e57a3154d 152181514;163658839 +Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 SVK08_2017-07 single KAPA SYBR FAST DNA none Illumina MiSeq PAIRED WGS 1341471 SRR10010584 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/084/SRR10010584/SRR10010584_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/084/SRR10010584/SRR10010584_2.fastq.gz d55052c8ae6a2e219596ed216f1d81f3;b41d36f87c8233eb5095f0df03747087 47807296;46331297 +Duggan2020 2020 10.1186/s13059-020-02079-z VK08 SRA PRJNA561155 SRS5298894 DVK08_2017-08ds double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 614274 SRR10010585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/085/SRR10010585/SRR10010585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/085/SRR10010585/SRR10010585_2.fastq.gz 8fbcdec363b781374defd10fba65bf0f;f5ae7359f7d4741b57ba4e47fb1a34ea 30656133;34004397 +Duggan2020 2020 10.1186/s13059-020-02079-z VK12 SRA PRJNA561155 SRS5298893 DVK12_2019-01 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2912644 SRR10010586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/086/SRR10010586/SRR10010586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR100/086/SRR10010586/SRR10010586_2.fastq.gz abbc9e2294d5a307e4916b4b4ada3e68;e2fbedcc7f4ed926c0f334fb97a05ef0 157768389;167668299 +Jager2022 2022 10.1016/j.tube.2022.102181 body_210 SRA PRJNA795622 SRS11554883 body210_A double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq X PAIRED WGS 58414020 SRR17499019 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/019/SRR17499019/SRR17499019_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/019/SRR17499019/SRR17499019_2.fastq.gz 64c07f9194159d6ac459cb1d89e3032d;3dc6ad3a84132fff1013c008cc52da31 3941440515;3753166391 +Jager2022 2022 10.1016/j.tube.2022.102181 body_210 SRA PRJNA795622 SRS11554883 body210_B double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq X PAIRED WGS 9768947 SRR17499018 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/018/SRR17499018/SRR17499018_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR174/018/SRR17499018/SRR17499018_2.fastq.gz 5f9ad49d7787d1857b096dc6a27e1380;2a66ad5a28fe0f553c6a4b8e865e0e6e 654630901;627204826 +Rieux2021 2021 10.1038/s41598-021-00518-w P04808771 SRA PRJNA698751 SRS8172159 AJHA16 unknown Unknown unknown unspecified SINGLE RNA-Seq 8687869 SRR13608699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR136/099/SRR13608699/SRR13608699.fastq.gz 71b71d16ea63a7465443240ef8063681 113111989 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 I.I2 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 104886594 ERR7303550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/000/ERR7303550/ERR7303550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/000/ERR7303550/ERR7303550_2.fastq.gz 825326983e3c8f59731cc24a8c338847;17df877516351b9949b5786e10bde0ad 2806151164;2822885868 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 IC7 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 80319730 ERR7303553 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/003/ERR7303553/ERR7303553_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/003/ERR7303553/ERR7303553_2.fastq.gz d692a4a0865cb8753c961f470d3b768d;e9e532bdb6c91f1ca632ef384bdc967f 1947121851;2016325596 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555208 IC11 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 108001856 ERR7303554 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/004/ERR7303554/ERR7303554_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/004/ERR7303554/ERR7303554_2.fastq.gz e22ae8b6fbe97d84677bd15901e7eed9;4c0722ace2d73929ddec206f0c54aa2d 2625476006;2710005884 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555205 IC14 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 125205674 ERR7303555 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/005/ERR7303555/ERR7303555_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/005/ERR7303555/ERR7303555_2.fastq.gz 6043bcd867835ab8f264104f8ab4d0b6;70fb96fefa144369fec5bd41045f66b4 3823351835;3889742972 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555209 IC15 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 110736790 ERR7303556 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/006/ERR7303556/ERR7303556_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/006/ERR7303556/ERR7303556_2.fastq.gz 438160c23fb013915449f9295a386fd3;0adf0b461270b0d16f949fc3c522828f 3312064669;3419344141 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555210 IC18 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 74352738 ERR7303557 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/007/ERR7303557/ERR7303557_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/007/ERR7303557/ERR7303557_2.fastq.gz 0a66b0fb351cf971b6e44b65cd0ee7ae;de4d7e424826a8c3ce7d355369c3596a 1854685213;1867870076 +Guellil2021 2021 10.1038/s41598-021-98214-2 IMO2 ENA PRJEB27822 ERS8555211 IC19 double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 61092786 ERR7303558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/008/ERR7303558/ERR7303558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR730/008/ERR7303558/ERR7303558_2.fastq.gz a0cc71c164aadb32e2478c38aaa0f7b2;ee6a4ff2438cd828298c4b827141f920 1506603737;1527311630 +Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG1 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 19151842 ERR7448187 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/007/ERR7448187/ERR7448187.fastq.gz 38211a1b9c8378fc1e449681173e1277 629828075 +Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG2 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 300624029 ERR7448188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/008/ERR7448188/ERR7448188.fastq.gz 683dfb8ea855b24e127bccdfc5842bb2 10121409009 +Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG1 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 12690759 ERR7448189 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/009/ERR7448189/ERR7448189.fastq.gz 24e7b4645ff0033c06c051eb190627d0 428644711 +Guellil2022 2022 10.1186/s13059-021-02580-z EDI064 ENA PRJEB45013 ERS8968539 SG2 double HGS Taq Diamond none NextSeq 500 SINGLE WGS 248662536 ERR7448190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR744/000/ERR7448190/ERR7448190.fastq.gz 1fd0403795e103c62aa64773ea20db72 8793649985 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 16951828 ERR9355392 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/002/ERR9355392/ERR9355392_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/002/ERR9355392/ERR9355392_2.fastq.gz 658ec67e123afc7f7c6224b86843fec7;139ac382a6f07fd97ab6441217f8ad18 313096554;339559582 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17584650 ERR9355393 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/003/ERR9355393/ERR9355393_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/003/ERR9355393/ERR9355393_2.fastq.gz 98fbc87d060ef4a399babe1b9055c197;a7301b2cb283365877e2831761a94f49 326264586;356507196 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 19370698 ERR9355394 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/004/ERR9355394/ERR9355394_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/004/ERR9355394/ERR9355394_2.fastq.gz d9bd113cdf7a834553b4b4121b5fdea7;ddda2c8cabf336054ef27989f1623453 370461155;402438212 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17850874 ERR9355395 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/005/ERR9355395/ERR9355395_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/005/ERR9355395/ERR9355395_2.fastq.gz 4c99c0e2787eda03f87d84b9f61b1b24;37d4ec613fc4c404b4c37ef7127d2fb9 343309857;386684061 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK007 (5559/2; Grave 9) ENA PRJEB46734 ERS11205114 BSK007.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 27229398 ERR9355396 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/006/ERR9355396/ERR9355396_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/006/ERR9355396/ERR9355396_2.fastq.gz 40f40f56d1c0c3fd8f7ae0e879520d44;86a8ae911d163ba622befcfe9c86ab89 499027409;522602659 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK001 (176/4; Grave 19/20) ENA PRJEB46734 ERS11205112 BSK001.A0103.YP1.1 single PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 11189534 ERR9355397 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/007/ERR9355397/ERR9355397.fastq.gz c55908390d1ed9bfa7499360f41c70ac 413508084 +Spyrou2022 2022 10.1038/s41586-022-04800-3 BSK003 (176/7; Grave 28/29) ENA PRJEB46734 ERS11205113 BSK003.A0103.YP1.1 single PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 10741737 ERR9355398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR935/008/ERR9355398/ERR9355398.fastq.gz 70404b926652da7ca5635bf1d3f8c504 420669443 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0101.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 28565952 ERR9669404 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669404/ERR9669404_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669404/ERR9669404_2.fastq.gz 08f6257184374b0d08fb58cd136cd4d5;531557473965e8141de22b65b68aebc7 476051648;505185307 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0102.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 21671612 ERR9669405 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669405/ERR9669405_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669405/ERR9669405_2.fastq.gz 3cbffa97fc77a5a06018a45cf4f3e6f0;177d4d0a3e41d1bb337aaa42b6403869 418533397;482834091 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0103.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 24188424 ERR9669406 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/006/ERR9669406/ERR9669406_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/006/ERR9669406/ERR9669406_2.fastq.gz 4d573c16446d96c5a4f7deb14fc4c889;9badbf4d316ec0605d4ae2cb628f0931 405107593;436944436 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0301.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 22337878 ERR9669407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/007/ERR9669407/ERR9669407_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/007/ERR9669407/ERR9669407_2.fastq.gz 7c6a0da06785393ff5f94e4593ec75ee;342eb4adfd6587b679783c0aa6aacd49 383557902;398186270 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0302.YP1.1 double PfuTurbo Cx Hotstart DNA half-udg NextSeq 500 PAIRED Targeted-Capture 24430448 ERR9669408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/008/ERR9669408/ERR9669408_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/008/ERR9669408/ERR9669408_2.fastq.gz 1a68d69231d74fda238ece9e92ccbe1e;cecf1d84fa181b93287039c6d4284aa5 476540172;552408259 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC009 ENA PRJEB52494 ERS11891570 HGC009.A0303.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 24207012 ERR9669409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/009/ERR9669409/ERR9669409_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/009/ERR9669409/ERR9669409_2.fastq.gz f364962168a87191c7d29425a6b343b3;ad03a818612a195386f148fae5d552b3 408638869;440249942 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC004 ENA PRJEB52494 ERS11891572 HGC004.A0101.SE1.1 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 26551742 ERR9669410 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/000/ERR9669410/ERR9669410_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/000/ERR9669410/ERR9669410_2.fastq.gz 019022f35d607d9bac4072f4209e361a;4f355daa6d6f25a11d2c196f4c3e3ef3 444546764;481580713 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC004 ENA PRJEB52494 ERS11891572 HGC004.A0102.SE1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31864446 ERR9669411 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/001/ERR9669411/ERR9669411_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/001/ERR9669411/ERR9669411_2.fastq.gz 4b31c9702e91e5a7e995f6fdb8a5b6b2;46c3fac3f29c58f488932380664c748e 527729143;555916537 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC040 ENA PRJEB52494 ERS11891573 HGC040.A0101.SE1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 38485972 ERR9669414 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/004/ERR9669414/ERR9669414.fastq.gz 1ee0e83e64f8573df1942b4d0cfddd89 1160783154 +Neumann2022 2022 10.1016/j.cub.2022.06.094 HGC068 ENA PRJEB52494 ERS11891571 HGC068.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 17993639 ERR9669415 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/005/ERR9669415/ERR9669415.fastq.gz 494e69d761f9ee36431741931da748df 581023835 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281cU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3189279 SRR16922678 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/078/SRR16922678/SRR16922678_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/078/SRR16922678/SRR16922678_2.fastq.gz c22845b95016472792ec08a0253a9415;e10f6193fa95ab85532c4feb7bb9ba35 108986365;109306900 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281aU-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 57977817 SRR16922679 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/079/SRR16922679/SRR16922679.fastq.gz 27176e03efe5e381515cd955f872c823 1942994904 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281aU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2592677 SRR16922680 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/080/SRR16922680/SRR16922680_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/080/SRR16922680/SRR16922680_2.fastq.gz 34e2416160ad1583a92eda6051d8b182;ba10d1fb79d8b9ef5a77d784f3517ff9 87100475;90346889 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bU-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 111837207 SRR16922681 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/081/SRR16922681/SRR16922681.fastq.gz 62ca90c19247bab62f9998a5b825f94c 3819737404 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bU-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3495800 SRR16922682 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/082/SRR16922682/SRR16922682_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/082/SRR16922682/SRR16922682_2.fastq.gz 857f3ed3853cc79ddfcd911ce6cf1a71;b802f430a2e76cd088173476b52efd15 119819305;125251986 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281bnU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3676776 SRR16922683 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/083/SRR16922683/SRR16922683_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/083/SRR16922683/SRR16922683_2.fastq.gz 4abad9e258ddecc4a1d0d4ad1f140bd7;0bdc955fb6bda32dcb64510c5429df87 125127151;129871239 +Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-SE2 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 303224978 SRR16922684 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/084/SRR16922684/SRR16922684.fastq.gz e18b6319f1194cbed26a80cde440d1bd 10476984517 +Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 150232327 SRR16922685 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/085/SRR16922685/SRR16922685.fastq.gz 3d5e08f53c5cf4e1dc74da670dfa31e9 5306492183 +Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-SE2 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 256832150 SRR16922686 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/086/SRR16922686/SRR16922686.fastq.gz eaf0ce90bd1d12fbdc2c6e02e6b8f415 8803285926 +Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-SE1 single AccuPrime Pfx DNA full-udg NextSeq 500 SINGLE Targeted-Capture 75014612 SRR16922687 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/087/SRR16922687/SRR16922687.fastq.gz e995bb05cdb08a25f3191b61ec7c707f 2584866403 +Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386U-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 3616194 SRR16922688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/088/SRR16922688/SRR16922688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/088/SRR16922688/SRR16922688_2.fastq.gz 288e0ba3cb5cc2e9de07e2998b0d77ef;85bb2ae88af10080f40562e70f965bc1 125560823;130895117 +Vagene2022 2022 10.1038/s41467-022-28562-8 386 SRA PRJNA779792 SRS11049947 386nU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 6477081 SRR16922689 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/089/SRR16922689/SRR16922689_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/089/SRR16922689/SRR16922689_2.fastq.gz 20961f2f47f90213e78c4461f0cdade2;a34c440e2d063dbfe58fac6c6366dd82 229471170;245346319 +Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82U-PE single AccuPrime Pfx DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 2441151 SRR16922690 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/090/SRR16922690/SRR16922690_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/090/SRR16922690/SRR16922690_2.fastq.gz 8f303582086d7b47403fd9f42a1069f6;99184254b3d6b3ebc6666d487b6387cd 85187653;90274175 +Vagene2022 2022 10.1038/s41467-022-28562-8 82 SRA PRJNA779792 SRS11049946 82nU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3360095 SRR16922691 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/091/SRR16922691/SRR16922691_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR169/091/SRR16922691/SRR16922691_2.fastq.gz c1e291e014cbc3f0c374c9482d4d905c;ca16fed20c9417dd8e7de8bc007c1f7a 115435035;119261910 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281cnU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 4534757 SRR17121930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/030/SRR17121930/SRR17121930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/030/SRR17121930/SRR17121930_2.fastq.gz e33fda820ecc4a2da9062aa5d8942526;118830a57465f07c98fc9ed17712b335 152301736;159989354 +Vagene2022 2022 10.1038/s41467-022-28562-8 281 SRA PRJNA779792 SRS11049948 281anU single AccuPrime Pfx DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 2995886 SRR17121931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/031/SRR17121931/SRR17121931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR171/031/SRR17121931/SRR17121931_2.fastq.gz 052b3a0bee2a27d38be2f2c97660ba14;31b00a9a2b10cbc48a881d6372c42cb0 101748252;106945706 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.1 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 729746210 ERR9939477 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939477/ERR9939477_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939477/ERR9939477_2.fastq.gz 50c15ebe319e67990f9a37334c780a30;ce5e1a8511fd0eedd4f8ba81e5c92875 13667674645;14293596650 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.1 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 661697490 ERR9939478 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/008/ERR9939478/ERR9939478_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/008/ERR9939478/ERR9939478_2.fastq.gz cd98375432de10cc3164f18bc763f2da;f2be8234f3f69f526ae4032fc9a81dcc 12293560312;12907819272 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 386863910 ERR9939479 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/009/ERR9939479/ERR9939479_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/009/ERR9939479/ERR9939479_2.fastq.gz a6103ca923cf4558f8b983243479e942;80c6b9547bbdcee683b1ddf84487cbe9 7580269685;7896692160 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 402303864 ERR9939480 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/000/ERR9939480/ERR9939480_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/000/ERR9939480/ERR9939480_2.fastq.gz a3e7aa089f6c47a692e35d117caa7942;549d6bbea8a13e2c8c58a3ba0ae1732d 7741676029;8073956092 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 392650510 ERR9939481 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/001/ERR9939481/ERR9939481_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/001/ERR9939481/ERR9939481_2.fastq.gz 7b07c4480d2d91503b8d802440274bbc;b0e7b3a25956f1dba584020aa22ae8c1 7574744722;7880644002 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 756339688 ERR9939482 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/002/ERR9939482/ERR9939482_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/002/ERR9939482/ERR9939482_2.fastq.gz 74e301ed61c9aafe3311c7840aae185c;a75fabbb15b05ff01cf26792b9a7b76b 14117927036;15000950007 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 563642992 ERR9939483 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/003/ERR9939483/ERR9939483_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/003/ERR9939483/ERR9939483_2.fastq.gz fa3a9cfed7e3499febc3184d8a3e9587;74247fea38a76a1e77d36bdb8c2dfcca 10583302507;11294511972 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.2 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 513929068 ERR9939484 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/004/ERR9939484/ERR9939484_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/004/ERR9939484/ERR9939484_2.fastq.gz 1d59d4cbce96d6e9190982f8b0d4de15;d9a48c9260f727966c68ade7328c7c07 9709351022;10147864691 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 700918312 ERR9939485 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/005/ERR9939485/ERR9939485_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/005/ERR9939485/ERR9939485_2.fastq.gz 2d08964594c6525f4d418dfa05103874;9ce9395a07e31ece18cdfd50c1af6d7e 13494914328;13838319529 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 748171294 ERR9939486 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/006/ERR9939486/ERR9939486_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/006/ERR9939486/ERR9939486_2.fastq.gz 6daee6eaf31e4aa3a21741b3c7e7faca;24431da7cf070b7c886ad85ec969a668 13901172930;14274505498 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005-XXX001.A181012.SG1.3 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 753733414 ERR9939487 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939487/ERR9939487_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR993/007/ERR9939487/ERR9939487_2.fastq.gz 3e633137a43d571f3ca69da737b7c7ea;6858e50185b967aafa2f0953c3deca8e 13831587008;14252079086 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005_Run1 double AmpliTaq Gold DNA none NextSeq 500 SINGLE WGS 23925771 ERR9966695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/005/ERR9966695/ERR9966695.fastq.gz 6512c7feab32e963f7f82210b228f1c8 1031655765 +Guellil2022b 2022 10.1126/sciadv.abo4435 JDS005 ENA PRJEB46097 ERS12438280 utigJDS005_S14 double AmpliTaq Gold DNA none NextSeq 500 SINGLE WGS 9760844 ERR9966696 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/006/ERR9966696/ERR9966696.fastq.gz 553c7dbc04957f43e660f991d0c07ad3 375956668 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-191022-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 359229755 ERR9966697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/007/ERR9966697/ERR9966697.fastq.gz c0d6773c7f57a859d1be6bda62a40cc9 12565068865 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 259040995 ERR9966698 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/008/ERR9966698/ERR9966698.fastq.gz 43bdcef98b2ca977a8afd7e4708fd533 8307378258 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 317684494 ERR9966699 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/009/ERR9966699/ERR9966699.fastq.gz ac218660ca3c0080ccd20058773ec388 10503875893 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111-1-200204-SG1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 336269825 ERR9966700 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/000/ERR9966700/ERR9966700.fastq.gz 17189bd60b6a20168e3d6f787a2e5cd7 11169730829 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111_PSN650_S10 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 26980519 ERR9966701 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/001/ERR9966701/ERR9966701.fastq.gz b5c7a3a202fd61aeb9c0f6d2ed9c5bd9 928505816 +Guellil2022b 2022 10.1126/sciadv.abo4435 EDI111 ENA PRJEB46097 ERS12438281 utigEDI111_S1 double Phusion Hot Start High-Fidelity DNA none NextSeq 500 SINGLE WGS 339765264 ERR9966702 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR996/002/ERR9966702/ERR9966702.fastq.gz 4576c9e1720e806e5a3de2d258582464 11664154829 +Austin2022 2022 10.1038/s42003-022-03890-z St.LI SRA PRJNA851947 SRS13524932 StLI double KAPA HiFi Uracil+ half-udg NextSeq 500 PAIRED WGS 10007285 SRR19789961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR197/061/SRR19789961/SRR19789961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR197/061/SRR19789961/SRR19789961_2.fastq.gz b1c4f74ac3687e4c116e383a6c67b985;3b585e177b27b035b38488563aa8a620 462241004;561213881 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-5-6_S53 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 5300544 SRR18150952 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/052/SRR18150952/SRR18150952_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/052/SRR18150952/SRR18150952_2.fastq.gz 36479f9b2c5c414f7500f864ec251e85;edfbe72bc66c0438edc0cd9c00e09df5 278245879;306923931 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4_S77 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 2912298 SRR18150953 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/053/SRR18150953/SRR18150953_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/053/SRR18150953/SRR18150953_2.fastq.gz 6853f0a854f5a8e4034c08afc3951f10;f0fa9490ba838929304f86d1584c61f9 106299285;120122117 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4D_S57 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 15449232 SRR18150954 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/054/SRR18150954/SRR18150954_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/054/SRR18150954/SRR18150954_2.fastq.gz c2160158a20ddc5cbd093df0e7faa25b;16d239ca5a28034fbe88f79ac3921511 770219695;840992096 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4C_S56 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 7483535 SRR18150955 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/055/SRR18150955/SRR18150955_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/055/SRR18150955/SRR18150955_2.fastq.gz 79f0b40a03e5fe4b9b55f9b4933fe048;12bd023f08a2785bcb49c769649cbc78 374058762;403205476 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4B_S55 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 7650810 SRR18150956 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/056/SRR18150956/SRR18150956_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/056/SRR18150956/SRR18150956_2.fastq.gz 5e0a48d1fe5b3f9db7ced1f72a6676fe;445284db588c5b134253300bb6f149af 397779359;441468012 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-3-4A_S54 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 6081871 SRR18150957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/057/SRR18150957/SRR18150957_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/057/SRR18150957/SRR18150957_2.fastq.gz bd2102966a2d3c67690ea87924b96d70;a3d5f3a3f2ead540828c240f85fa9746 311516546;353562432 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-2_S68 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1428026 SRR18150958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/058/SRR18150958/SRR18150958_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/058/SRR18150958/SRR18150958_2.fastq.gz b24b6e83870d2724caa43b6a3a904e0e;45ea0c641bb7ed468c2886ff9eff7d60 55133527;68889683 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-2_S52 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 5990000 SRR18150959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/059/SRR18150959/SRR18150959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/059/SRR18150959/SRR18150959_2.fastq.gz 8d836e380e09b86386d98c46d843b69e;4452cc959cd6e9cf9355fa734a4cb845 310481422;346847466 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-5-6_S69 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1133130 SRR18150968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/068/SRR18150968/SRR18150968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/068/SRR18150968/SRR18150968_2.fastq.gz 06c8d2e6b996cb826be7daed6cf83de6;ec1e537d768b51fa11251d90770f1ca6 44364260;54648101 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-1_S67 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 1497645 SRR18150969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/069/SRR18150969/SRR18150969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/069/SRR18150969/SRR18150969_2.fastq.gz d6573e26220d45576e8554a6010b6615;01e5eadd8888e8835b11ed8a1e292473 61175563;69862712 +Long2022 2022 10.1038/s42003-022-03527-1 NASD1 SRA PRJNA810725 SRS12115743 LMN07-1_S51 double KAPA SYBR FAST DNA none Illumina HiSeq 1500 PAIRED WGS 6529733 SRR18150970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/070/SRR18150970/SRR18150970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR181/070/SRR18150970/SRR18150970_2.fastq.gz b3a43f394fff668fc0afdfa6f386e544;5be9f1428889a5028e047598a7f7c976 346242268;378621522 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Fer.T75 SRA PRJNA791766 SRS11653538 Fer.T75 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 13338644 SRR17604804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/004/SRR17604804/SRR17604804_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/004/SRR17604804/SRR17604804_2.fastq.gz 24542fbf75ab1002a28f0ae5b2d6bade;ff88456861e622ec0376485bf51a83b8 343660159;360826955 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Rip.USD618 SRA PRJNA791766 SRS11653590 Rip.USD618 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 10083762 SRR17604755 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/055/SRR17604755/SRR17604755_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/055/SRR17604755/SRR17604755_2.fastq.gz 7b34a5100b9f85b82a81542d9d645f24;b448e9a6bfcb89f90dd117411799f6ee 259617969;270214867 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Rip.USD628 SRA PRJNA791766 SRS11653591 Rip.USD628 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 14434687 SRR17604753 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/053/SRR17604753/SRR17604753_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/053/SRR17604753/SRR17604753_2.fastq.gz 3b20949dec7a3078dd02dd0b3b6b1d74;10f6c51bcb9060bf741103a6ac2b609a 376761946;393371719 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Tar.T71 SRA PRJNA791766 SRS11653602 Tar.T71 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 10547211 SRR17604742 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/042/SRR17604742/SRR17604742_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/042/SRR17604742/SRR17604742_2.fastq.gz daa4e7790d7aab7bea84bd91ac29e839;78f847e81acc69d917335ebc06d724f9 269520107;282499619 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 TR177 SRA PRJNA791766 SRS11653605 TR177 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 11991702 SRR17604739 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/039/SRR17604739/SRR17604739_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/039/SRR17604739/SRR17604739_2.fastq.gz cb7abc5a1c3c353d85a8c1685d3e3fa2;7e40bf84a5145abcbe98e75dd2bfc65a 300635634;314637119 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 PC-T5 SRA PRJNA791766 SRS11653578 PC-T5 double PfuTurbo DNA none Illumina NovaSeq 6000 PAIRED WGS 318602 SRR17604766 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR176/066/SRR17604766/SRR17604766_2.fastq.gz 840b205e472345eb3da5f5891dabfb10;e328540b328c0ae5f2e81b6772a9bcf3;cb26cb61ce1020f07d0f0ba6f906b4cc 777946;6791795;6962974 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 H07192 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 13363594 ERR7555586 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR755/006/ERR7555586/ERR7555586_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR755/006/ERR7555586/ERR7555586_2.fastq.gz 9ba1f2709958a6c4e3762e6e9e7d1997;09eac1339c01788ae9173abcfab21c44 245815842;251101447 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 14937140 ERR7563587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563587/ERR7563587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563587/ERR7563587_2.fastq.gz c734156365b58ffe379b25248b9f18eb;08ecb5164204ef86e67a42c77cc6e2da 282977533;298295622 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 H01549 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 13900040 ERR7563607 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563607/ERR7563607_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7563607/ERR7563607_2.fastq.gz 95108156f164ff3d8ae43b8b77337542;579951f755c9dc397fa43b4c13a3c438 259845072;272521312 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 H07200 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 16287630 ERR7563611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7563611/ERR7563611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7563611/ERR7563611_2.fastq.gz 54169074fb11f9c5bc7d710478a3d21e;5216218ec09ab5e44d596e87b054b834 329995834;354187120 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 H07198 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 15054474 ERR7563615 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7563615/ERR7563615_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7563615/ERR7563615_2.fastq.gz e0bcb9dbdb334a256951bb8ce5a961c9;5245820a9ba3f28fcebeffefb522b544 295543951;316836016 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 727233150 ERR7564468 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/008/ERR7564468/ERR7564468_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/008/ERR7564468/ERR7564468_2.fastq.gz 336400f05fdbbfe32f2e5a90f7b18be6;ccdbe083671f4c78789189d4508422b1 13221814748;14418948696 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 H07192 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 761040474 ERR7564469 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7564469/ERR7564469_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7564469/ERR7564469_2.fastq.gz c63620ffa0d576b64f0f37ba1197b8fb;e0a3ff7f54b48adfe588a3809247d27f 13267138645;14081073128 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H07202 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED WGS 752610868 ERR7564473 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7564473/ERR7564473_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7564473/ERR7564473_2.fastq.gz e5cd4d3b29b5aab4ebc418216fbe71b7;b5fab1388ab2edf7e63a655231998443 13459018092;14293111561 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G78T ENA PRJEB49149 ERS9069028 I01668 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 1955478 ERR7565665 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7565665/ERR7565665_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7565665/ERR7565665_2.fastq.gz 9dd5fae8f9a687c43a0d6a12437d0b28;5adbf82f40b62ee6b2259aa12fd5c5a4 37543362;39224928 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 3577178 ERR7565666 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7565666/ERR7565666_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7565666/ERR7565666_2.fastq.gz 7491d3377a7ce3144949da3456d69f1d;dce76434f93a591330734bfc2be1cb55 68423167;72332681 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 14341408 ERR7565669 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7565669/ERR7565669_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/009/ERR7565669/ERR7565669_2.fastq.gz 8a73bf6f255caced0b423231e056eb21;f8990716643125ce26462c7b6a39c3d1 327477828;355214169 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 I01676 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 258 ERR7565670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/000/ERR7565670/ERR7565670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/000/ERR7565670/ERR7565670_2.fastq.gz 89419a4a96d3316bca77fed6596179d6;57f55ed7e321d53ceb5a45b577fb8281 6182;6725 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G27T ENA PRJEB49149 ERS9069033 I01676 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 4903400 ERR7565672 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/002/ERR7565672/ERR7565672_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/002/ERR7565672/ERR7565672_2.fastq.gz f33c4505b3a249f61614510ce2b158d8;753efa79ca4650bd04bb8546e96ae4d4 96605446;103491677 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G31T ENA PRJEB49149 ERS9069030 I01658 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 22662294 ERR7565673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7565673/ERR7565673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/003/ERR7565673/ERR7565673_2.fastq.gz ebd9090965851b8d3e28d458f19d068e;18f70b1ec3bf0447912a8d6c03bb7d6e 496917146;546096303 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 I01674 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 148 ERR7566241 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7566241/ERR7566241_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/001/ERR7566241/ERR7566241_2.fastq.gz 6268e8959afafe301df9a06ca19a6cbe;dea1afd51e6bc4dd1f4a63036eca0269 3573;4045 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 H31169 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 578 ERR7566245 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7566245/ERR7566245_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/005/ERR7566245/ERR7566245_2.fastq.gz 88398673dccf403249f5865390b122bf;82c3d916d9440b4b4f75e343b037c097 12311;13178 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G79T ENA PRJEB49149 ERS9069039 I01674 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9156564 ERR7566246 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7566246/ERR7566246_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/006/ERR7566246/ERR7566246_2.fastq.gz 13654d788780011bc8a8fbcaad1c8dbe;e62b94ab26dce825dbb8621024b6c85c 170977998;176516326 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 G83T ENA PRJEB49149 ERS9069041 I01678 double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10000560 ERR7566247 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7566247/ERR7566247_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR756/007/ERR7566247/ERR7566247_2.fastq.gz 10c68363bddfa7b6827d6a3a29cdc31b;150cf87c6c56dc182ae974a0d899a137 194429362;202915434 +Braun2020 2020 10.3390/microorganisms8020298 Chemnitz 1878 (M-0290509) SRA PRJNA309927 SRS5865127 R070-14 double Unknown none Illumina MiSeq PAIRED WGS 3854620 SRR10743037 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR107/037/SRR10743037/SRR10743037_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR107/037/SRR10743037/SRR10743037_2.fastq.gz f2ec23ff5b8afc5a2f1ece21b75d1657;fe0a9c9c6a0f3cf352dc05d8b6ef243d 734469183;600088846 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 747930 SRR23219883 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/083/SRR23219883/SRR23219883_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/083/SRR23219883/SRR23219883_2.fastq.gz bc3d0c921f0dc0c9dfe9cb5b2d792b64;dc0f0655a0b133a48c0272a6eb7072c7 38592517;41460411 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 16 SRA PRJNA926136 SRS16580002 D71b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 30936358 SRR23219884 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/084/SRR23219884/SRR23219884_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/084/SRR23219884/SRR23219884_2.fastq.gz d442ad5d7b105c58ee1d167603411458;aa3f5c3b56418e405dfb91e65da2f561 1701201556;1787613498 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5549779 SRR23219885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/085/SRR23219885/SRR23219885_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/085/SRR23219885/SRR23219885_2.fastq.gz e969acc9871ef04ce03c30cfcba31def;f9f5d7eb8b579d2df4c53e18adf4edc7 286996773;308626369 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4674209 SRR23219886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/086/SRR23219886/SRR23219886_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/086/SRR23219886/SRR23219886_2.fastq.gz 4f7236a32fd278f0a0de0793ad2fffa6;a2f4d47bd32debc6332e6b823045c324 239904360;254949048 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2466330 SRR23219887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219887/SRR23219887_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219887/SRR23219887_2.fastq.gz e3bc16260a2499da2db1cfeb0d05e2c1;08238399a1e747aaaaf596ff305fb85e 123529200;130406223 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2024201 SRR23219888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219888/SRR23219888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219888/SRR23219888_2.fastq.gz df3304ffac810e2896e4b47d638a7b18;f7e52a50495286ebd3d54f9376307b29 100063455;105028320 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1973641 SRR23219889 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219889/SRR23219889_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219889/SRR23219889_2.fastq.gz 7bd1c4907fda42dc5851a14285469b03;e7d2aff52d258a1143feaab8d0d61255 60686919;60706112 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1270919 SRR23219890 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/090/SRR23219890/SRR23219890_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/090/SRR23219890/SRR23219890_2.fastq.gz ea0feb007bd1fdc62cad47cb318ebea8;c439d1fbef89ad5dc94811dcea10f7f6 36314644;36450050 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1480551 SRR23219891 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/091/SRR23219891/SRR23219891_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/091/SRR23219891/SRR23219891_2.fastq.gz b393bd60a2459e8ee714986bc8ce8cc0;ec0f39fd35dcf908a01ed4cc3d698ed6 76756705;83766964 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4894302 SRR23219892 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/092/SRR23219892/SRR23219892_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/092/SRR23219892/SRR23219892_2.fastq.gz 6133dec2a2e81386b9eac11cdcee2746;5c9f5dc231f937f93f2c740b8b88a73e 137148728;137854546 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4191605 SRR23219893 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/093/SRR23219893/SRR23219893_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/093/SRR23219893/SRR23219893_2.fastq.gz cf98e94e0b517f6003343adf11fcf57e;30b4dfc3259aa45677da97e004f60aa4 109566425;110370424 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5799534 SRR23219894 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/094/SRR23219894/SRR23219894_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/094/SRR23219894/SRR23219894_2.fastq.gz 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double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2458222 SRR23219897 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/097/SRR23219897/SRR23219897_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/097/SRR23219897/SRR23219897_2.fastq.gz 912c6701e038d857a14a8092324d9bc0;5fc65d3028b0bf7b8c3dcb228e35e223 135115793;145309429 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 945996 SRR23219898 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/098/SRR23219898/SRR23219898_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/098/SRR23219898/SRR23219898_2.fastq.gz 07d6ab50ca468ff21d8f907ce1536783;35c04a02e37da69924976d95a68d78d8 28421329;29159658 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1351192 SRR23219899 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/099/SRR23219899/SRR23219899_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/099/SRR23219899/SRR23219899_2.fastq.gz a63daa0018d04f47fde39addc9f3cf23;1b8355fcc45b3c60124887f10744574d 42612637;42731381 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1790763 SRR23219900 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/000/SRR23219900/SRR23219900_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/000/SRR23219900/SRR23219900_2.fastq.gz fbb33cb247c9a139526f182561ccaf3d;138c7b424a800c35840ca431d6303f3d 90612305;96532361 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1155 A1155 SRA PRJNA926136 SRS16580001 P384b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2245735 SRR23219901 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/001/SRR23219901/SRR23219901_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/001/SRR23219901/SRR23219901_2.fastq.gz 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AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4238765 SRR23219904 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/004/SRR23219904/SRR23219904_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/004/SRR23219904/SRR23219904_2.fastq.gz 1475d1be38b4b42a1122b222bd392d0e;da81822af2777ff8af1fe158cd1e446a 229694800;250062026 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1155636 SRR23219905 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/005/SRR23219905/SRR23219905_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/005/SRR23219905/SRR23219905_2.fastq.gz 7cd5d2d9c1edaa0943d0fb0fa24e2a9d;85fc6d0b973fc15b3236c85aa875472f 61021597;66537988 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G.25A SRA PRJNA926136 SRS16579986 D62b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 21423100 SRR23219906 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/006/SRR23219906/SRR23219906_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/006/SRR23219906/SRR23219906_2.fastq.gz 493aa4a7bf18a12f72b49bc7b507604d;6a61b995aefaf4f0b07705611c461828 639115526;641064853 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4484587 SRR23219907 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/007/SRR23219907/SRR23219907_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/007/SRR23219907/SRR23219907_2.fastq.gz 9331489977830ba0b468788763e664a4;42456fdb759d53f0389f1fdf1e0c2b38 122109311;122844925 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1572704 SRR23219908 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/008/SRR23219908/SRR23219908_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/008/SRR23219908/SRR23219908_2.fastq.gz 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Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1325886 SRR23219927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/027/SRR23219927/SRR23219927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/027/SRR23219927/SRR23219927_2.fastq.gz e0ff4bdf739ee535ed367ba1ef9222aa;6a383c6c7f417309d307170179a4aa5a 35480738;35755848 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4731835 SRR23219931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/031/SRR23219931/SRR23219931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/031/SRR23219931/SRR23219931_2.fastq.gz 9032bba2394b91e1146499f9771aea32;af614db255f3d1d36aed72e1800e2925 240478133;262420800 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5029228 SRR23219932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/032/SRR23219932/SRR23219932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/032/SRR23219932/SRR23219932_2.fastq.gz 178a853f40a76b50fdb915ee58fc50e5;bce48642eb4ec8f1af332afc4a0462e5 255020371;281409566 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1164071 SRR23219933 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/033/SRR23219933/SRR23219933_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/033/SRR23219933/SRR23219933_2.fastq.gz 9e981422b6bc33c547c3fe7a5285ee77;8d609cef309b394e3d569b21387fc2e0 59873606;64517695 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A1480 x1480 SRA PRJNA926136 SRS16579988 P387j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3526903 SRR23219934 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/034/SRR23219934/SRR23219934_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/034/SRR23219934/SRR23219934_2.fastq.gz 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double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1690135 SRR23219937 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/037/SRR23219937/SRR23219937_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/037/SRR23219937/SRR23219937_2.fastq.gz d654fccb2c853c22f4da92408f7524b1;8af4093493d31786877fb3397f887078 84405699;91283534 +Eaton2023 2023 10.1016/j.cub.2023.01.064 x1265 SRA PRJNA926136 SRS16579987 P246a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 397829 SRR23219938 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/038/SRR23219938/SRR23219938_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/038/SRR23219938/SRR23219938_2.fastq.gz 10c92c6ada28df6e75f8735b611cc29f;b0a89d664936eaf8587e2270a2e2cf1e 18107830;19331058 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212o double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 7331316 SRR23219939 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/039/SRR23219939/SRR23219939_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/039/SRR23219939/SRR23219939_2.fastq.gz bbb70b6727a96f8a8e27f50fe74f6db0;f88b4783c29ec8db7598381f063c6fc0 387943394;419972314 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212n double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 8269841 SRR23219940 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/040/SRR23219940/SRR23219940_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/040/SRR23219940/SRR23219940_2.fastq.gz 6562793cfdba2eb6e03a82fc0f75f04b;9b4b28638166af08216d5dd705bed132 443626604;472141240 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2222335 SRR23219941 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/041/SRR23219941/SRR23219941_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/041/SRR23219941/SRR23219941_2.fastq.gz 11830fbdbcf8a4a95275e6f4b3383bda;ff680d655b5646ed2e56335c20eeeba7 109807733;125986168 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5913018 SRR23219942 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/042/SRR23219942/SRR23219942_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/042/SRR23219942/SRR23219942_2.fastq.gz 1d4a71a612f789772c458792dcf8d0dd;72e1407ee32f6cdef4e80218f92c7748 324885545;363823400 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1042634 SRR23219943 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/043/SRR23219943/SRR23219943_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/043/SRR23219943/SRR23219943_2.fastq.gz 098a1a3b3a330bf3f95180ee6ffd275c;c2f70e7fa51bbc544532b3ed15772ff9 25348486;26200272 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G.25A SRA PRJNA926136 SRS16579986 D62a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 845921 SRR23219944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/044/SRR23219944/SRR23219944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/044/SRR23219944/SRR23219944_2.fastq.gz e5cd4f5463318294be7099c69ccc9cf7;9c7b10edebbf7299626a6825158c222d 23647454;23843164 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5967460 SRR23219945 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/045/SRR23219945/SRR23219945_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/045/SRR23219945/SRR23219945_2.fastq.gz 270f38194d8d51b397e29c69bf1f5703;a1203cf66258d74b443907d567d3801e 176079450;177092979 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1192874 SRR23219946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/046/SRR23219946/SRR23219946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/046/SRR23219946/SRR23219946_2.fastq.gz 870eb22a4c320f37931a96f83d87e012;a0d589cee8c741c63155049937e003cc 25774384;26512612 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3179921 SRR23219947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/047/SRR23219947/SRR23219947_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/047/SRR23219947/SRR23219947_2.fastq.gz edf37e98bf9b228fe5d0ff7aad2874ea;23193bc991a14c648d166371a2a9c030 93412602;93886290 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3664836 SRR23219948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/048/SRR23219948/SRR23219948_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/048/SRR23219948/SRR23219948_2.fastq.gz 6e1187dffd749d38766abffb7577f5cb;eb003b91c983698b4b940f6ddfeaae3f 188547731;200927425 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3193090 SRR23219949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/049/SRR23219949/SRR23219949_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/049/SRR23219949/SRR23219949_2.fastq.gz 758c5252b3e1edac7015029e54693ca7;2ffd140e6591d64e294695fc021c0f00 102471638;102919299 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 933 SRR23219950 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/050/SRR23219950/SRR23219950_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/050/SRR23219950/SRR23219950_2.fastq.gz 1c06a11315374afd3ef23399b75674cf;9784c7fd63893b9bb7250d69263e9e4c 49611;54529 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2532483 SRR23219951 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/051/SRR23219951/SRR23219951_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/051/SRR23219951/SRR23219951_2.fastq.gz fce4a9daf470805cedb804e7a1bf713c;1a220a0f35d9de2c2858c1240c27efa4 125896450;131479169 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1755 SRR23219952 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/052/SRR23219952/SRR23219952_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/052/SRR23219952/SRR23219952_2.fastq.gz 96c511fbbf50cd88016e6f960d2e2a29;d970a6f3eb0dbd129d8412b7c62d5bcd 92960;104606 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2509433 SRR23219953 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/053/SRR23219953/SRR23219953_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/053/SRR23219953/SRR23219953_2.fastq.gz 9b40473e24b22a853e1b1131925227fa;1393db1415450466816fcd3b12e76c02 79412092;79647260 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G371 SRA PRJNA926136 SRS16579985 P212a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1660940 SRR23219954 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/054/SRR23219954/SRR23219954_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/054/SRR23219954/SRR23219954_2.fastq.gz b3685376a278929b474c33fb5db4378d;bdcf51730ffe485354ae68469af4f5b7 47398073;47460364 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Gr GCx15 SRA PRJNA926136 SRS16579984 D51b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 27619274 SRR23219955 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/055/SRR23219955/SRR23219955_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/055/SRR23219955/SRR23219955_2.fastq.gz 1cd4286e823b27a568982da30b2e6782;1cef09996a55bf39a6e67a40ea2a887b 800497432;805892929 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187n double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4363313 SRR23219956 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/056/SRR23219956/SRR23219956_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/056/SRR23219956/SRR23219956_2.fastq.gz db53de8497a32cf446918671666941e5;95d95bfbdfa6491f883e1a1f0f445199 126442328;126780006 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187m double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 5542469 SRR23219957 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/057/SRR23219957/SRR23219957_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/057/SRR23219957/SRR23219957_2.fastq.gz 2700cef32b05c1f0221c6583d80fc415;1b4f8d676d0a008b64709e7e1107eedc 294441477;319340137 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187l double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4732630 SRR23219958 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/058/SRR23219958/SRR23219958_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/058/SRR23219958/SRR23219958_2.fastq.gz 40a169960da314c3151f950689d47f3b;5b3938e5f1a1342c9daa6baa1afc1282 129001400;131930156 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187k double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2809920 SRR23219959 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/059/SRR23219959/SRR23219959_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/059/SRR23219959/SRR23219959_2.fastq.gz 0fe979bfc779a8add555f07b06036aee;1ecce45930d0eee01d18dca1303e84a9 76589555;77328398 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187j double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 914343 SRR23219960 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/060/SRR23219960/SRR23219960_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/060/SRR23219960/SRR23219960_2.fastq.gz 0ddcad627ec5339290180bd365cbba83;fba4b32891f95d4e349b66377c71cb61 43864042;48278621 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187i double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 3579081 SRR23219961 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/061/SRR23219961/SRR23219961_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/061/SRR23219961/SRR23219961_2.fastq.gz 6ca7700b40bb3055e735a759203a0f9d;0f23505709fd738eab043d1288e29825 70837143;75890636 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187h double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1288478 SRR23219962 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/062/SRR23219962/SRR23219962_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/062/SRR23219962/SRR23219962_2.fastq.gz 83168d7287da362c5ee46dbe289b10ad;e2252f3ff89c039bc9458f5c12c39038 61997827;65850949 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187g double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 4801837 SRR23219963 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/063/SRR23219963/SRR23219963_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/063/SRR23219963/SRR23219963_2.fastq.gz ea14834eaf22341c8a2a02d0c3433e47;2a2cc5bdfc2fd0d9fc01180159cbe740 135939204;136205881 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187f double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 327118 SRR23219964 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/064/SRR23219964/SRR23219964_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/064/SRR23219964/SRR23219964_2.fastq.gz b190ba440aa8b444877a288d1c45d51e;3235ed191167134290668af5579c1c77 10129385;10193385 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187e double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 729289 SRR23219965 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/065/SRR23219965/SRR23219965_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/065/SRR23219965/SRR23219965_2.fastq.gz 2be33dfe4bfa1bac6551c3eca1870d57;ac55c741a63de21b6fa982e3cbe3245d 22433275;23150693 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Gr GCx15 SRA PRJNA926136 SRS16579984 D51a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 872087 SRR23219966 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/066/SRR23219966/SRR23219966_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/066/SRR23219966/SRR23219966_2.fastq.gz b63fd2a1f0cdd345973c594014bd6fa5;fc372ee6c46483e7eb92f1a5bf238169 24076532;24396232 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187d double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 6524234 SRR23219967 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/067/SRR23219967/SRR23219967_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/067/SRR23219967/SRR23219967_2.fastq.gz 0c2b990c22fee19e4585578f6ac4dc93;3a7fb2217aa113f24b3b4b3b06e6d7db 361447409;388855138 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187c double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1797532 SRR23219968 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/068/SRR23219968/SRR23219968_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/068/SRR23219968/SRR23219968_2.fastq.gz 088f635c569f382fbb7b1def23781d67;5ac0efba06a8293d9bcca3afce12bc44 56834134;57171092 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 2632030 SRR23219969 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/069/SRR23219969/SRR23219969_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/069/SRR23219969/SRR23219969_2.fastq.gz d567179d0997245625c334a460ae235e;9cfc15ef4b7a2c9aa208c9fe3749c7f2 131833694;139594342 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A146x3011 SRA PRJNA926136 SRS16579983 P187a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 974547 SRR23219970 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/070/SRR23219970/SRR23219970_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/070/SRR23219970/SRR23219970_2.fastq.gz 65b6e50aaac18c6beb2dd82aa94e48f5;30fb6ef76835afc6580d03558550d7ed 43174359;46818134 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 25B x98 SRA PRJNA926136 SRS16579982 R36b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 29807887 SRR23219971 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/071/SRR23219971/SRR23219971_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/071/SRR23219971/SRR23219971_2.fastq.gz 6977a4589856323cd5ed70b616ddb665;41a182e92e1a585532137c5f4963a14a 1646702784;1722206987 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 25B x98 SRA PRJNA926136 SRS16579982 R36a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1116614 SRR23219972 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/072/SRR23219972/SRR23219972_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/072/SRR23219972/SRR23219972_2.fastq.gz 9e828b403e5e22fb70b4e0f002f7779b;74cbd6d45d4619d2b345e2d283d2deb7 29220111;29447695 +Eaton2023 2023 10.1016/j.cub.2023.01.064 ID 319 SRA PRJNA926136 SRS16579981 R21b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 40704606 SRR23219973 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/073/SRR23219973/SRR23219973_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/073/SRR23219973/SRR23219973_2.fastq.gz bf003e9c4ccfdd4279997001bc8d75bd;37764e03464075799ffb10990310a52c 1148449320;1152857651 +Eaton2023 2023 10.1016/j.cub.2023.01.064 ID 319 SRA PRJNA926136 SRS16579981 R21a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1810523 SRR23219974 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/074/SRR23219974/SRR23219974_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/074/SRR23219974/SRR23219974_2.fastq.gz 6386c943bb73741d161f19a61e291c20;eec07d809c42531d7457031681ce12cb 48310791;48885388 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 861 x1035 SRA PRJNA926136 SRS16579973 D75b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 27178045 SRR23219976 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/076/SRR23219976/SRR23219976_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/076/SRR23219976/SRR23219976_2.fastq.gz ae81be4cd033c4a8af73a7e6c3040fee;65657a44e17ebf45ceb79569d11c8827 1509645860;1580397073 +Eaton2023 2023 10.1016/j.cub.2023.01.064 G. 861 x1035 SRA PRJNA926136 SRS16579973 D75a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 1010003 SRR23219987 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219987/SRR23219987_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/087/SRR23219987/SRR23219987_2.fastq.gz 790245b2caa19915e731a876d9c14535;655f6b4426101be3fe5d18cb2646c928 29472327;29540704 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A19 x21 SRA PRJNA926136 SRS16579972 D24b double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 46083075 SRR23219988 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219988/SRR23219988_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/088/SRR23219988/SRR23219988_2.fastq.gz 56a32e847d7c701239e352ea76ca5d73;daec638d13ad8a8b1cf60fcc802712d8 1360814811;1366205662 +Eaton2023 2023 10.1016/j.cub.2023.01.064 A19 x21 SRA PRJNA926136 SRS16579972 D24a double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED WGS 933793 SRR23219989 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219989/SRR23219989_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR232/089/SRR23219989/SRR23219989_2.fastq.gz 37108199f42f1296c3aacc9afb9ace7b;bfe803386227735b073e3376403fb4f5 49932402;58928402 +Rifkin2023 2023 10.1038/s42003-023-04582-y BBayA SRA PRJNA930765 SRS16665771 baa001 single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE WGS 1225105 SRR23320768 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/SRR233/068/SRR23320768/SRR23320768.fastq.gz 0fd88effcdfcbdebff88b97308947bf8 15127737 +Sarhan2023 2023 10.1186/s12915-022-01509-7 3045 ENA PRJEB44723 ERS10216488 3045 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 52823444 ERR8202909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR820/009/ERR8202909/ERR8202909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR820/009/ERR8202909/ERR8202909_2.fastq.gz 261a6f5fe988cffdf421303d7581b087;24bbe3ab0c9f460ef777936e3d5e676b 1775631371;2004262086 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A100 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2254233 ERR11262423 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11262423/ERR11262423.fastq.gz 0df3bc0db4d6f92b38c9eb3c9b0d4511 65651502 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A1655 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2041845 ERR11262430 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11262430/ERR11262430.fastq.gz 743a38f38c4270de9271c16286bfcd21 62171808 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A3150 single AccuPrime Pfx DNA none unspecified SINGLE WGS 510590 ERR11262436 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11262436/ERR11262436.fastq.gz 62a91ee900823d2d67cee4cf9527adba 14230608 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A3151 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1411720 ERR11262437 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11262437/ERR11262437.fastq.gz 72fd18bbf4dd73a738be6594193c528d 39599900 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A28 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 2784401 ERR11262439 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/039/ERR11262439/ERR11262439.fastq.gz efda0b93fead0feb1d14e7b484e7e470 82233713 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A29 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 4957302 ERR11262440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/040/ERR11262440/ERR11262440.fastq.gz 923d1d492e0e3f7d1825759ed1320dcf 151586034 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A33 single AccuPrime Pfx DNA none unspecified SINGLE WGS 18975450 ERR11262442 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/042/ERR11262442/ERR11262442.fastq.gz ce3f54ddebcd07b5ecf55f33a34c46df 526121745 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A66 single AccuPrime Pfx DNA none unspecified SINGLE WGS 441669 ERR11262443 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/043/ERR11262443/ERR11262443.fastq.gz 225acf1046627ad3a3ff789fbdfc9353 13226242 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A67 single AccuPrime Pfx DNA none unspecified SINGLE WGS 640668 ERR11262444 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/044/ERR11262444/ERR11262444.fastq.gz 036601a2f04b74299c1ea0c7fa681499 18565561 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A222 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1715182 ERR11262424 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11262424/ERR11262424.fastq.gz fff8483ec07ebcb70d02e435713a7a9a 48594271 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A19 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 4574726 ERR11262434 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11262434/ERR11262434.fastq.gz 7a705aa6bfe9df42ab147b6b4358af11 140468354 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A16 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1172993 ERR11262427 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11262427/ERR11262427.fastq.gz 58bffb6875dbdac5d975a18dff1e08ba 35252097 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A17 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 2483805 ERR11262428 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11262428/ERR11262428.fastq.gz 763d15e322653e4a7efd764bc26c1f89 76858824 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO719A1654 single AccuPrime Pfx DNA none unspecified SINGLE WGS 2230754 ERR11262429 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11262429/ERR11262429.fastq.gz f4f7f1b4e1f9a9afc59a1729e7b7bd8c 70236772 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SKO3305A10 single AccuPrime Pfx DNA none unspecified SINGLE WGS 210905275 ERR11262432 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11262432/ERR11262432.fastq.gz f2d99b5cff37f2516bbab3178cceaa05 5916318597 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A20 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 4993942 ERR11262435 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11262435/ERR11262435.fastq.gz f92d3a4df6c21da19660d83e54fce012 137494640 +Swali2023 2023 10.1038/s41467-023-38393-w C10091 ENA PRJEB61230 ERS14891340 SWA3304A68 single AccuPrime Pfx DNA none unspecified SINGLE WGS 4945098 ERR11262445 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/045/ERR11262445/ERR11262445.fastq.gz 3103c1e011059ce978f8eb548edbd7b3 136788974 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A18 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1532377 ERR11262433 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11262433/ERR11262433.fastq.gz 93f4f7e8e743f6796bd604f74991aa16 49162720 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A15 single AccuPrime Pfx DNA none Illumina MiSeq SINGLE Targeted-Capture 1090587 ERR11262426 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11262426/ERR11262426.fastq.gz d4383815606c1ecfe49ebccedcca6015 35127077 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891341 SWA3304A30 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 12974948 ERR11262441 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/041/ERR11262441/ERR11262441.fastq.gz 73e0ffb4a3c1d5bcbaaefca9bb4930c1 394518804 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891342 SKO719A22 single AccuPrime Pfx DNA none unspecified SINGLE WGS 3773285 ERR11262422 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11262422/ERR11262422.fastq.gz 9a852c1b5b6e2dd8f2ef217682357438 121523751 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891342 SKO3305A4 single AccuPrime Pfx DNA none unspecified SINGLE WGS 756209056 ERR11262431 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11262431/ERR11262431.fastq.gz 0341ba5f2e31cb6b1b9adb85db84b2d0 21198299666 +Swali2023 2023 10.1038/s41467-023-38393-w C10098 ENA PRJEB61230 ERS14891343 SWA3304A26 single AccuPrime Pfx DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 95147891 ERR11262438 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/038/ERR11262438/ERR11262438.fastq.gz cd15d4f78840490886a804d090781b5b 2781054839 +Swali2023 2023 10.1038/s41467-023-38393-w C10928 ENA PRJEB61230 ERS14909714 SKO719A1330 single AccuPrime Pfx DNA none unspecified SINGLE WGS 1655114 ERR11262425 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11262425/ERR11262425.fastq.gz 113798f9c11a7f7af20b824b13ec7bb3 47631779 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr13_i13_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 613320 ERR10822513 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822513/ERR10822513_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/013/ERR10822513/ERR10822513_2.fastq.gz df75bb4f8a2c9bfaa48439b993340e21;d5defc5f56aec153be31adcb77af0316 14749107;14483761 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr19_i37_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 190286 ERR10822515 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822515/ERR10822515_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/015/ERR10822515/ERR10822515_2.fastq.gz a962623e18a5620b8be28d6588683612;5c313aa1eceee4214d799c2048866d13 4589523;4747485 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 148820 ERR10822519 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/019/ERR10822519/ERR10822519_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/019/ERR10822519/ERR10822519_2.fastq.gz b2ac9c11f8bf69bf17bac7597203ea2f;d6920ef7457419dba846aa7e4b9356e3 3661844;3559207 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr21_i41_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 284610 ERR10822521 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822521/ERR10822521_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/021/ERR10822521/ERR10822521_2.fastq.gz cb8c6eeb1dc1c6d769e83f30db854498;8861b87f0e7cb2dd936731cf58c9060c 6768690;6591602 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr25_i52_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 276966 ERR10822525 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822525/ERR10822525_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822525/ERR10822525_2.fastq.gz b3a6d203941566c554d004f5f448ea51;dea7a72f4bbec34ed3dd208369b22ea5 6349860;6577270 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 309244 ERR10822526 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822526/ERR10822526_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/026/ERR10822526/ERR10822526_2.fastq.gz ba1732481ab18ab9edb95e732e533590;f48e8a9c8bacea1b71b0bb81993034af 7213766;7443380 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 253470 ERR10822527 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822527/ERR10822527_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822527/ERR10822527_2.fastq.gz 6015740b76c364869912471a90327089;235d19e0f5483d77fb7943486223b56e 6087856;5865967 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555611 MAJ75t3_Ages_2_7012_lr50_i79_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 34534 ERR10822531 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822531/ERR10822531_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822531/ERR10822531_2.fastq.gz b551cc1950a142fc10ddedc6effc6f7e;f91b93f4d26d1bde8274e93504317e90 777830;741677 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr10_i10_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 253028 ERR10822532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822532/ERR10822532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822532/ERR10822532_2.fastq.gz 05f7209213371756ac27bdff47ba0e1f;c9e35eb957b7563c12229e4b51903f68 5901182;5728714 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 178688 ERR10822536 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822536/ERR10822536_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/036/ERR10822536/ERR10822536_2.fastq.gz 3dc944040f1c8d45a7ac0c7d3332cb4d;69880f966951c403db348cc8de4d36d9 4150912;4299395 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 188334 ERR10822540 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822540/ERR10822540_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822540/ERR10822540_2.fastq.gz 4b212ebdc4cdf4375d2b0bd786d0e79e;4eed216462d23d2c11fda3e12349078e 4274236;4412630 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr51_i54_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 14688 ERR10822541 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822541/ERR10822541_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/041/ERR10822541/ERR10822541_2.fastq.gz cc7a4011e4603157b4b3afd1023a9f6e;efaa1da1d80dbedaaf22e06fef16df10 307577;294779 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 48230 ERR10822542 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822542/ERR10822542_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/042/ERR10822542/ERR10822542_2.fastq.gz 8b404484784b62905f0fc968248a1bcf;74e329d3091b9b68757db0078c82d52a 1126803;1161691 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr20_i38_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 35444 ERR10822543 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822543/ERR10822543_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/043/ERR10822543/ERR10822543_2.fastq.gz b5cbff2cd63142e4eac81fada3fc571f;1424ebf5ae26a26c9ee706f81cd8071d 833427;848639 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 69962 ERR10822546 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822546/ERR10822546_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/046/ERR10822546/ERR10822546_2.fastq.gz 36cd933ba011cee389705e40d87e6ca3;bad641627aedb149d0b0e549ea8654cd 1604421;1666555 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 268508 ERR10822548 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822548/ERR10822548_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/048/ERR10822548/ERR10822548_2.fastq.gz 5ffd1df644c852696c78ebfd25647f8a;135f47ceaa81e0f3ff090cf563e844ed 6272657;6379536 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 176578 ERR10822549 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822549/ERR10822549_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822549/ERR10822549_2.fastq.gz 90edf6db0e2363f7d622aea1bc875147;99cea5ab66a1ad2eed174f39682fd6d1 4242709;4142988 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr15_i21_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 209310 ERR10822550 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822550/ERR10822550_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822550/ERR10822550_2.fastq.gz 9c119a739899c6e944e28a50b9557e9f;2b176e0db709864718bc09fb97bf971d 5055396;4959484 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555616 MAJ75t8_Ages_2_8346_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 221956 ERR10822553 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822528/ERR10822528_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822528/ERR10822528_2.fastq.gz 9e279be0e7951e189d5da114f63e05db;2d792aed5b65e4ef995f8d373f6fcc41 481156;468364 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 138616 ERR10822529 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822529/ERR10822529_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822529/ERR10822529_2.fastq.gz 457299fb4b2e977897237a19d1b4c11e;cb127f777a81021792941d9c4fae3d0d 3321358;3183341 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555610 MAJ75t_Ages_2_6107_lr48_i77_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 166496 ERR10822530 fastq_all 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MAJ75t_Ages_2_6107_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 48323 ERR10822180 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822180/ERR10822180.fastq.gz 8a05c20cead4a5ff90cef4de086e79a4 1784279 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555611 MAJ75t3_Ages_2_7012_lr50_i79_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 45824 ERR10822183 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822183/ERR10822183.fastq.gz 9639fe96efe49531e196b9bae1014eb8 1879467 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 658285 ERR10822188 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822188/ERR10822188.fastq.gz 059192071f626a3a20e11f2e24ade6d3 26167003 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555612 MAJ75t4_Ages_2_7013_lr16_i26_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 695900 ERR10822190 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822190/ERR10822190.fastq.gz 67f583d230bf821dab6a94d584d2f50e 27387699 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555613 MAJ75t5_Ages_2_8157_lr07_i07_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 97053 ERR10822194 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822194/ERR10822194.fastq.gz d1e260503b40dac5c6b5cff77579896e 4197534 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555614 MAJ75t6_Ages_2_8158_lr08_i08_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 150002 ERR10822196 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822196/ERR10822196.fastq.gz daebf306ed28297c83fb113b9a24f300 5555212 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555614 MAJ75t6_Ages_2_8158_lr21_i41_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 356277 ERR10822197 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822197/ERR10822197.fastq.gz e17faeb7bbed259046f4051d5a2bfb06 12128727 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 134530 ERR10822198 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822198/ERR10822198.fastq.gz 063f66564bd7350b465578253cecd0f5 5651278 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ75 ENA PRJEB59233 ERS14555615 MAJ75t7_Ages_2_8159_lr22_i44_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 156120 ERR10822199 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822199/ERR10822199.fastq.gz e8e192e96e89f1fac901f59df78c304a 6542036 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822483/ERR10822483_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822483/ERR10822483_2.fastq.gz 1fa7f6eca674949b3b513cfb8e7f8dfa;e09fc85bda270c69b22f74497171e7af 7019684;7123955 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr09_i09_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 146172 ERR10822488 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822488/ERR10822488_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822488/ERR10822488_2.fastq.gz a1601f7afeb5d7fa817d7e23c0d26c3c;7b7836e34ce52fdf4c85554bbdc2ccac 3313775;3239909 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555603 MAJ46t8_Ages_2_8345_lr11_i11_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 261456 ERR10822490 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822494/ERR10822494_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/094/ERR10822494/ERR10822494_2.fastq.gz b2261cc588c00003ff7a93753f8f44b7;9136dbdb87a799f7fa7e8f5240d46beb 7074382;6862288 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr25_i52_T0.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 8916 ERR10822499 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822499/ERR10822499_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/099/ERR10822499/ERR10822499_2.fastq.gz 27433324dc3c8236563cff958350c98b;9987126d30729e6e89fea714988a2ffe 207868;215515 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr27_i55_T1min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 13460 ERR10822500 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822495/ERR10822495_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/095/ERR10822495/ERR10822495_2.fastq.gz 88e202c7aaebaa6a1ecb693582d43f1f;2734e28d31df0a423840733505dfacf0 8567160;8709598 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr24_i47_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 17556 ERR10822498 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822498/ERR10822498_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/098/ERR10822498/ERR10822498_2.fastq.gz 3c76bb5d2ce39a3acca37107c8c52310;f894d7a352ca3a77eb87c7c1195227b9 418723;423232 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr28_i56_T2.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 8104 ERR10822501 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822501/ERR10822501_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822501/ERR10822501_2.fastq.gz 5acfddb4713ac9f7e8891df6d7635e73;5cd3697c0e2eb7651d8bb2d542f73a9e 191713;195331 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555596 MAJ46t11_Ages_2_9349_lr29_i57_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 13106 ERR10822502 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822502/ERR10822502_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822502/ERR10822502_2.fastq.gz 275c4482b6979f5dfcb43906e22afcd7;1da3da9a7be0117bc98bdbf42e75b188 313426;308508 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr12_i12_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 228148 ERR10822446 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822454/ERR10822454_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822454/ERR10822454_2.fastq.gz 5f29fcff0c48f1629fb9c33390a5f44d;4898038d836f43c5910bf2f9127bd34e 5571644;5810481 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr48_i77_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 191970 ERR10822458 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822458/ERR10822458_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822458/ERR10822458_2.fastq.gz 1010121acfd81efedf319487a2b53187;04063dd7f78b56a7f044981a855ccdf6 4489386;4316433 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 34984 ERR10822460 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822460/ERR10822460_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822460/ERR10822460_2.fastq.gz a3304604297107ee1755f95f13b64b80;e9163b6195f85c097d5f965938c41598 773900;812031 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555595 MAJ46t_Ages_2_6106_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 5156 ERR10822462 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822462/ERR10822462_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822462/ERR10822462_2.fastq.gz fdcd7528e7f01101520561600bc8af4c;42431bb45490007205bda388d8214f4b 128054;130536 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555598 MAJ46t3_Ages_2_7008_lr47_i76_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 41534 ERR10822464 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/064/ERR10822464/ERR10822464_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/064/ERR10822464/ERR10822464_2.fastq.gz 86f9576e359a669d5b46690fc619c75e;635c6f133d4933f70e1d9fb0d3149715 857693;891963 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555599 MAJ46t4_Ages_2_8154_lr04_i04_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 101666 ERR10822465 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/065/ERR10822465/ERR10822465_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/065/ERR10822465/ERR10822465_2.fastq.gz 8edf54fe2f8f1f8093cebf4b342dffd7;5d80b297f13bc4f90dde7c13d14e1c62 2379817;2355944 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555600 MAJ46t5_Ages_2_8155_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 49616 ERR10822467 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/067/ERR10822467/ERR10822467_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/067/ERR10822467/ERR10822467_2.fastq.gz 6bf3c877ff130d9da4fc51625277d47f;79f0740e545584ac9c1a727837938dee 1210098;1162513 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr06_i06_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 75510 ERR10822469 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/069/ERR10822469/ERR10822469_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/069/ERR10822469/ERR10822469_2.fastq.gz 0e7666087a44b3b7f49deb6a9c2a22b1;430a412bfb1be46f02251e5f0134ad33 1815495;1858447 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555601 MAJ46t6_Ages_2_8156_lr19_i37_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 92024 ERR10822470 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822478/ERR10822478_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/078/ERR10822478/ERR10822478_2.fastq.gz 0fabaec4c56d38eae6bd834886c1d4cb;548a97c1d85aed083d2f0e51e80befe3 384215;397462 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr01_i01_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 396658 ERR10822480 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822480/ERR10822480_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822480/ERR10822480_2.fastq.gz cb9ead1bf864a46f5a5b11c0d9bcea25;f4cbb7112b1af15b723b47025ee321c5 9139649;9210105 +Clavel2023 2023 10.1016/j.isci.2023.106787 MAJ46 ENA PRJEB59233 ERS14555602 MAJ46t7_Ages_2_8344_lr05_i05_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 307406 ERR10822484 fastq_all 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MiniSeq PAIRED Targeted-Capture 315288 ERR10822585 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822585/ERR10822585_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822585/ERR10822585_2.fastq.gz 4d3acf053c95124cba16cfa3afd63718;932bb4de6e92ec1cbe79c3933bda7a49 7484100;7316920 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr12_i12_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 210456 ERR10822588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822588/ERR10822588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822588/ERR10822588_2.fastq.gz 90ac990be159107aa0c696410e839747;748e35544393f2138e2f39913d7c045f 5058454;4928547 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr13_i13_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 272164 ERR10822589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822589/ERR10822589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822589/ERR10822589_2.fastq.gz c48815a29c2dfbbcdd615b716ed9b06a;c966fcba70e7dbbdc1761296b9194c45 6564698;6334334 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 186652 ERR10822590 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822590/ERR10822590_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822590/ERR10822590_2.fastq.gz 0e881df158ad207e73f308c229a17919;a1e974f410463b00f5f3514bdd47ba31 4626819;4467161 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr18_i32_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 221874 ERR10822594 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822574/ERR10822574_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/074/ERR10822574/ERR10822574_2.fastq.gz 44c9ffdb7f3e4ea7917c6730dccf3fb0;c97bb8374c47bbb3ce00a24f8c98b52b 4495222;4678091 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr31_i59_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 383286 ERR10822581 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822581/ERR10822581_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/081/ERR10822581/ERR10822581_2.fastq.gz f7dd9d3bf59aa5200c6076ca591fd22c;06669b279a3dc582d8ce3c6649f2cff1 8429974;8609550 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr5_i5_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 354766 ERR10822582 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822582/ERR10822582_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/082/ERR10822582/ERR10822582_2.fastq.gz 72367436825516b452c70dbd7ebfda2f;85ba6dd650943c14860da8654df3fe43 8345007;8569255 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555626 RAY1015t3_Ages_2_8349_lr20_i38_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 252396 ERR10822596 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822596/ERR10822596_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/096/ERR10822596/ERR10822596_2.fastq.gz e668cec49e35b4eedd056aaa70799961;10583df119178d9e02656f22f8d70296 6186144;5996576 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr23_i46_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 143768 ERR10822571 fastq_all 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ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822580/ERR10822580_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/080/ERR10822580/ERR10822580_2.fastq.gz 257572b67c8cf027333e00a061c67f3b;a28eb89f672d9d5d49cdbdd1c82a50ab 7177474;7310686 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr6_i6_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 156850 ERR10822583 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822583/ERR10822583_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/083/ERR10822583/ERR10822583_2.fastq.gz e811c9e76d3a4853e48cab4beb351b6d;994d0f377e33447f786e3f9b0918ea1a 3768793;3685537 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 RAY1015t2_Ages_2_8348_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 301154 ERR10822586 fastq_all 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RAY1015t_Ages_2_6112_lr4_i4_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 706863 ERR10822227 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/027/ERR10822227/ERR10822227.fastq.gz f9817c07b04297a27fb5ffe43122ce94 26861113 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr27_i55_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 367751 ERR10822229 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822229/ERR10822229.fastq.gz f1461f8cd2a6fea7809c480bcd1b33b2 15238954 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555624 RAY1015t_Ages_2_6112_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 404850 ERR10822231 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/031/ERR10822231/ERR10822231.fastq.gz 2fc70fccddd6701a90ae1ab24518fcb7 16573463 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1015 ENA PRJEB59233 ERS14555625 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RAY1028t_Ages_2_6113_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 423853 ERR10822252 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822252/ERR10822252.fastq.gz 70dbc2494ef09cb385c93c4e824083c7 17361291 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 425692 ERR10822253 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/053/ERR10822253/ERR10822253.fastq.gz 7f7891069af8c4ebbb3c171788b7aa5f 16964428 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 427280 ERR10822254 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/054/ERR10822254/ERR10822254.fastq.gz 53848bd7a4f1b6bca0fd81309fd49a6b 18150795 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 359410 ERR10822255 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/055/ERR10822255/ERR10822255.fastq.gz b25924b40c520f77c94f0f9c8e25a011 15373129 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 580505 ERR10822256 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822256/ERR10822256.fastq.gz d52f4544ec943ce8ba4763f9fb367a17 24717603 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr37_i65_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 324072 ERR10822257 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822257/ERR10822257.fastq.gz 8c3a46008e7b06e52d7a5207b252a3d8 14387884 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr38_i66_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 456830 ERR10822258 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/058/ERR10822258/ERR10822258.fastq.gz caa3384e1cee554c18a7129b657e15ee 19388526 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr39_i67_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 707959 ERR10822259 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822259/ERR10822259.fastq.gz cfc385f645a35329ddb3f4261d7f9bd4 30084140 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr24_i47_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 77478 ERR10822597 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822597/ERR10822597_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822597/ERR10822597_2.fastq.gz 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10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr28_i56_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 114183 ERR10822600 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822600/ERR10822600_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/000/ERR10822600/ERR10822600_2.fastq.gz c207df75ae1be8872247651b737a231c;e69cb337b3b30bbffe2a491898bb330f 5495353;5305370 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr29_i57_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 125261 ERR10822601 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822601/ERR10822601_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/001/ERR10822601/ERR10822601_2.fastq.gz 7c0c8f20ddacaf0fb68e1b16da367c18;3906a320ff8e8aebe45f4f1cf23e2f4d 5648540;5827869 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr32_i60_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 119510 ERR10822602 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822602/ERR10822602_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/002/ERR10822602/ERR10822602_2.fastq.gz c1557b367782366111e7f6020b66e227;408496f27e0b2ee781b477f1320cfe26 5524223;5585107 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr33_i61_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 112501 ERR10822603 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822603/ERR10822603_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/003/ERR10822603/ERR10822603_2.fastq.gz d46880b15cc613f8a4e20dbfc86d9f50;f393e9437fb0e6204bce45459b2a73f1 5243249;5168690 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY1028 ENA PRJEB59233 ERS14555627 RAY1028t_Ages_2_6113_lr34_i62_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 164635 ERR10822604 fastq_all 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double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 660241 ERR10822285 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/085/ERR10822285/ERR10822285.fastq.gz 3bf5c717572989befd18b9af510111d7 27339063 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr48_i77_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 580786 ERR10822286 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/086/ERR10822286/ERR10822286.fastq.gz 429632b50f511aa32c9d618efb93293a 24078955 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr50_i79_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 608949 ERR10822287 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/087/ERR10822287/ERR10822287.fastq.gz 77d19269444bd50f42fc3d73243d4bf8 26119802 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr51_i54_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 233724 ERR10822288 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822288/ERR10822288.fastq.gz 646398eb51454e46f9e880d8a714f64d 9559955 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr52_i63_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 676164 ERR10822289 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/089/ERR10822289/ERR10822289.fastq.gz feee32510aa137239509dd88fa0efd9f 28623138 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr53_i64_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 142905 ERR10822290 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/090/ERR10822290/ERR10822290.fastq.gz 0d44ed07c22d0a30c93baaebaaf25168 5964873 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr34_i62_SN2 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED WGS 128714 ERR10822628 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822628/ERR10822628_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/028/ERR10822628/ERR10822628_2.fastq.gz 867d7413a7124a2ad05bd893ad757615;83cf6d02940f12df4d8d77aab2577704 6016942;5631374 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr40_i69_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 299694 ERR10822629 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822629/ERR10822629_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/029/ERR10822629/ERR10822629_2.fastq.gz c2deb296eba15d1084af5a8616b22cc7;2a5aba8046e24019c8eb6e526bce99db 14565686;14085204 +Clavel2023 2023 10.1016/j.isci.2023.106787 RAY3030 ENA PRJEB59233 ERS14555635 RAY3030t_Ages_2_6120_lr41_i70_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 241606 ERR10822630 fastq_all 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10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555637 LAR27t2_Ages_2_9069_lr4_i4_T40min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 249823 ERR10822325 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/025/ERR10822325/ERR10822325.fastq.gz 3b91183827ddb2ca9824a4890ddd3702 10276352 +Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555638 LAR27t4_Ages_2_9346_lr5_i5_T5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 41224 ERR10822332 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/032/ERR10822332/ERR10822332.fastq.gz 7334bddde856d9f1fc6bed1e0c7d8667 1545738 +Clavel2023 2023 10.1016/j.isci.2023.106787 LAR27 ENA PRJEB59233 ERS14555638 LAR27t4_Ages_2_9346_lr6_i6_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 61443 ERR10822333 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/033/ERR10822333/ERR10822333.fastq.gz 60cf2d998a4ca8fe6f4587b8fa72c110 2469972 +Clavel2023 2023 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SQ8723t2_Ages_2_9071_lr7_i7_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 47831 ERR10822351 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/051/ERR10822351/ERR10822351.fastq.gz 3e6768bf375e611601ad65282ccfb703 2172645 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr8_i8_T20min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 183924 ERR10822352 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/052/ERR10822352/ERR10822352.fastq.gz aa037d9844f29f21530ad108da050724 7458702 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 SQ8723t2_Ages_2_9071_lr12_i12_T60min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 277783 ERR10822356 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/056/ERR10822356/ERR10822356.fastq.gz 064310c2bf2f5685215174851a302058 10835463 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr17_i27_T0min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 23715 ERR10822357 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/057/ERR10822357/ERR10822357.fastq.gz 8a15aa0aba3494c99857839304327107 1104621 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr20_i38_T2.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 19257 ERR10822360 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/060/ERR10822360/ERR10822360.fastq.gz f4536d43e3379cbc03c780d7ecb7bfc0 811985 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555652 SQ8723t_Ages_2_8659_lr7_i7_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 2948813 ERR10822350 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/050/ERR10822350/ERR10822350.fastq.gz effa1013e28e1b397606c21414c40a00 125600370 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555653 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SQ8723t4_Ages_2_9348_lr19_i37_T1min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 34887 ERR10822359 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/059/ERR10822359/ERR10822359.fastq.gz 9e9438ebc9f4ac34f1700bece38fe7e0 1387168 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr22_i44_T7.5min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 119958 ERR10822362 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/062/ERR10822362/ERR10822362.fastq.gz accfbea8ed16a7ae4d993d8edd285f92 4881607 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8723 ENA PRJEB59233 ERS14555654 SQ8723t4_Ages_2_9348_lr23_i46_T10min double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 100636 ERR10822363 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/063/ERR10822363/ERR10822363.fastq.gz 14a80aec367710c23a55cf759a3adc32 3856783 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8833 ENA PRJEB59233 ERS14555642 SQ8833t_Ages_2_8661_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 132762 ERR10822688 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822688/ERR10822688_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/088/ERR10822688/ERR10822688_2.fastq.gz 530a9b2c6364a96618e2d41b60f13136;71e089195a15dde3dff3142850ae1480 3164582;3293963 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8833 ENA PRJEB59233 ERS14555642 SQ8833t_Ages_2_8661_lr9_i9_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 982592 ERR10822340 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/040/ERR10822340/ERR10822340.fastq.gz d51c58587e885ae6c9bf6d75c22e1f84 37659096 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8962 ENA PRJEB59233 ERS14555651 SQ8962t_Ages_2_8664_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq PAIRED Targeted-Capture 119192 ERR10822697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822697/ERR10822697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/097/ERR10822697/ERR10822697_2.fastq.gz b66d7d13d0fa54eed12e5ea31fceb088;14bfea91d45a0163f5a997e0a4dc451b 3059098;3151326 +Clavel2023 2023 10.1016/j.isci.2023.106787 SQ8962 ENA PRJEB59233 ERS14555651 SQ8962t_Ages_2_8664_lr14_i16_SN1 double AccuPrime Pfx DNA half-udg Illumina MiniSeq SINGLE Targeted-Capture 1876918 ERR10822349 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR108/049/ERR10822349/ERR10822349.fastq.gz a0c5603cf22e0520d8be016a6bd459aa 69267755 +Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547238 DSH025.A0201.YP1.1 single AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 9470273 ERR11479454 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/054/ERR11479454/ERR11479454.fastq.gz 8ab24f98f3896da32012ef63fde3403f 279725487 +Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547237 DSH008.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 18186757 ERR11479451 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/051/ERR11479451/ERR11479451.fastq.gz d8f2f2fd8d62e02ff8a716fea9d18ad1 577912772 +Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547238 DSH025.A0101.YP1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE Targeted-Capture 20942952 ERR11479453 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/053/ERR11479453/ERR11479453.fastq.gz 178729c1ff7150afcaded359e62ed960 651275896 +Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547237 DSH008.A0201.YP1.1 single AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE Targeted-Capture 6850253 ERR11479452 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/052/ERR11479452/ERR11479452.fastq.gz 869fdf1366e7bceba885863135667f7d 205976513 +Neumann2023 2023 10.1553/archaeologia107 DSH008 ENA PRJEB61070 ERS15547235 DSH008.A0101.SG1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE WGS 3973592 ERR11479449 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/049/ERR11479449/ERR11479449.fastq.gz 6cf53899d806b5373b9846c9cffbebc7 124500605 +Neumann2023 2023 10.1553/archaeologia107 DSH025 ENA PRJEB61070 ERS15547236 DSH025.A0101.SG1.1 single AccuPrime Pfx DNA none Illumina HiSeq 4000 SINGLE WGS 4901176 ERR11479450 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/050/ERR11479450/ERR11479450.fastq.gz 999057c65a6ca3edeef32cbb714645ab 143481817 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 1292846992 ERR11478695 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/095/ERR11478695/ERR11478695_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/095/ERR11478695/ERR11478695_2.fastq.gz f253781a551cdf2415c9381715a3bcee;a392e90f10a7b28677870ece699773f5 29915422152;31546072181 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 X3003 ENA PRJEB60595 ERS14773585 X3003T double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 20632842 ERR11011327 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/027/ERR11011327/ERR11011327_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/027/ERR11011327/ERR11011327_2.fastq.gz a4a298f0a640223c6ec99d7f3855adc2;6586c9bba9ceda8ab6359fa94980c743 467638929;445341650 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T_3 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 21145732 ERR11011329 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/029/ERR11011329/ERR11011329_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/029/ERR11011329/ERR11011329_2.fastq.gz 7642790292dc433986c6159b2d708b99;d3ca94b15ab06613149b702f45882089 471808218;493240187 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 X3003 ENA PRJEB60595 ERS14773585 X3003T_2 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 229864836 ERR11011330 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/030/ERR11011330/ERR11011330_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR110/030/ERR11011330/ERR11011330_2.fastq.gz 5937f8e01e4a0c32e0059cd506432f2e;23d59102b0dfb3a5722ec08dc1b5a5cc 4985082432;5107020039 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 X52 ENA PRJEB60595 ERS14773586 X52T_2 double PfuTurbo Cx Hotstart DNA half-udg Illumina NovaSeq 6000 PAIRED WGS 1329592756 ERR11435697 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/097/ERR11435697/ERR11435697_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/097/ERR11435697/ERR11435697_2.fastq.gz ae96523cb62dbd7cd7c27530039eff97;7617998ef105698c866d6cdedf8710ea 30549343594;29093388600 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884856 KRA004.A0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10220738 ERR11202909 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/009/ERR11202909/ERR11202909_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/009/ERR11202909/ERR11202909_2.fastq.gz dfa4f293ebb5a3665e42cfc1fd3b6813;25c71f69827adf0792e04c90e0a39e0e 186251653;192557211 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884856 KRA004.A0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10278910 ERR11202910 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/010/ERR11202910/ERR11202910_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/010/ERR11202910/ERR11202910_2.fastq.gz 64a0b23736ea265ae7d43f983e684a01;cfc866608423cfdabd08dff49baca0ee 192588589;185849366 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884857 KRA004.A0201 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9525042 ERR11202911 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/011/ERR11202911/ERR11202911_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/011/ERR11202911/ERR11202911_2.fastq.gz d1bd6bae76cafd5dd3ccdefa6cb6a602;66422058317bd7ecc84d03360253e523 172581354;178547024 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884859 KRA004.D0501 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 11781722 ERR11202916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/016/ERR11202916/ERR11202916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/016/ERR11202916/ERR11202916_2.fastq.gz 8fe15d0ee0994166e763dab56f269f64;fac26a4974fdb189b35ab25b9718e6c4 219062832;208390381 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884859 KRA004.D0501 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 11932510 ERR11202917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/017/ERR11202917/ERR11202917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/017/ERR11202917/ERR11202917_2.fastq.gz e1f16e6fa1bf1c8d8c3e40fdce0fcbad;cab2c5fb96d75b46fb32fea4c5ddc722 209336406;220831024 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA008 ENA PRJEB61096 ERS14884861 KRA008.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 16155308 ERR11202920 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/020/ERR11202920/ERR11202920_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/020/ERR11202920/ERR11202920_2.fastq.gz a186c93f9d24895df33ce05896881f7c;efa8f062cbfd0b49218b0cdba7986fd4 314997036;299845407 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4817486 ERR11202923 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11202923/ERR11202923_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/023/ERR11202923/ERR11202923_2.fastq.gz 5ddc0509ea52490bbfb75191604b5201;57abda2f3d6f24b18e0b08f4e031ba1d 100651685;118272472 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5813694 ERR11202924 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11202924/ERR11202924_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/024/ERR11202924/ERR11202924_2.fastq.gz 318328bd1e8a4c26445288629ba80cee;86b11b96dc3aecec24f6e13803041050 122333463;142413921 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4822034 ERR11202927 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11202927/ERR11202927_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/027/ERR11202927/ERR11202927_2.fastq.gz 2188c6d5089dabb6fb62bda975beb7a9;f0ab7022f6e86a51e177380bac19dd61 97554144;113876106 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5229444 ERR11202929 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11202929/ERR11202929_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/029/ERR11202929/ERR11202929_2.fastq.gz e042bf42a9d8c716e575da8a6b9919ab;51a96bf2d70515d26c8abd493409d4f8 123805158;106342272 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0102 double AmpliTaq Gold DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 20168892 ERR11202930 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11202930/ERR11202930_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/030/ERR11202930/ERR11202930_2.fastq.gz 4802996b62a6745b28ce1112084874ea;2557b55df3094c995436d7bc102ea7ba 357560863;337901625 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0103 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 31398664 ERR11202931 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11202931/ERR11202931_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/031/ERR11202931/ERR11202931_2.fastq.gz 633a97406b8e2a32ca5f349f02578f3e;65ee889b18d530411c3b45a51ca7edb4 570088672;533201421 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 4901794 ERR11202933 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11202933/ERR11202933_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/033/ERR11202933/ERR11202933_2.fastq.gz 1041e23fd4abcb3ca2c06800078966c5;b4a56eb8ab2388977c8c84c708981803 99299217;119037391 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884860 KRA004.I0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10166410 ERR11202919 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/019/ERR11202919/ERR11202919_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/019/ERR11202919/ERR11202919_2.fastq.gz 50a949798d8f2a4b8d0432b351ec94a0;121179f99de91793d81b8b6c87a3f818 180786614;190312404 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA008 ENA PRJEB61096 ERS14884861 KRA008.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 16367442 ERR11202921 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/021/ERR11202921/ERR11202921_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/021/ERR11202921/ERR11202921_2.fastq.gz 3d620a7447e8e0aa3a5f8564ef55fd9d;150a10a5d734d5e4b3aa7a283075604c 301621921;317503967 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5580106 ERR11202922 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11202922/ERR11202922_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/022/ERR11202922/ERR11202922_2.fastq.gz 9b97d688ab02efe5ba894c2e69b2f302;c38dfdc16240a45115ca2d82fc6ff700 118057443;136769060 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5923318 ERR11202928 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11202928/ERR11202928_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/028/ERR11202928/ERR11202928_2.fastq.gz de3eca9832110c034a833897b95ecc50;658e4707692ca1d536b7f8b695eb308c 139295443;120721858 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5734162 ERR11202932 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11202932/ERR11202932_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/032/ERR11202932/ERR11202932_2.fastq.gz 23bb1a2481862a7dfa22ddfb231ee275;c6f2a9b909931d363501c2522f456e3e 140156519;117429698 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0102 double AmpliTaq Gold DNA half-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 17264252 ERR11202936 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11202936/ERR11202936_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/036/ERR11202936/ERR11202936_2.fastq.gz 9a7e564f725e36d55d048e9b8fbaf8f3;4e3eb2acf6d320219f798ffa47029412 282736360;301660582 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884857 KRA004.A0201 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 9593292 ERR11202912 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/012/ERR11202912/ERR11202912_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/012/ERR11202912/ERR11202912_2.fastq.gz 8b13ee44524aea73171eeabac22a4244;45c44d646be60f81abd4f4e0a0e363eb 172516647;178987082 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 8225072 ERR11202913 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/013/ERR11202913/ERR11202913_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/013/ERR11202913/ERR11202913_2.fastq.gz b04ca2a5cbdc34f338d762dcf10e74f1;2cc3d453c555322a6a191e68168cb612 149586289;154090893 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0301 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 8340408 ERR11202914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/014/ERR11202914/ERR11202914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/014/ERR11202914/ERR11202914_2.fastq.gz 66ad3798b8f0a93203568405aef30c9e;b5c8befc203d5a49034d5c8b1719a0f9 150622009;155474803 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884858 KRA004.A0302 double AmpliTaq Gold DNA full-udg Illumina HiSeq 4000 PAIRED Targeted-Capture 23086182 ERR11202915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/015/ERR11202915/ERR11202915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/015/ERR11202915/ERR11202915_2.fastq.gz 680a8b550a3eb935f0f3245e37e16a85;888db33d4a25be7baacacd11372d8755 401585432;426408297 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA004 ENA PRJEB61096 ERS14884860 KRA004.I0101 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 10044766 ERR11202918 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/018/ERR11202918/ERR11202918_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/018/ERR11202918/ERR11202918_2.fastq.gz cca21dcb6a79fd970530a0cfa2429cce;f8ae6a472c6f076e47c20965ba8d26a2 188681451;179715537 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA018 ENA PRJEB61096 ERS14884862 KRA018.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5161998 ERR11202925 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11202925/ERR11202925_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/025/ERR11202925/ERR11202925_2.fastq.gz 8619517b6de3709e88cbbe9e8e50192e;f97297c0a7ce2d87643368ac90e78dd4 127335086;108534718 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA028 ENA PRJEB61096 ERS14884863 KRA028.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5716674 ERR11202926 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11202926/ERR11202926_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/026/ERR11202926/ERR11202926_2.fastq.gz 0cd40fe89cc869ddb2abfef323a49c5a;7286534a69435dd12a642bbdfcfe1240 134241252;116675406 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 6030024 ERR11202934 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11202934/ERR11202934_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/034/ERR11202934/ERR11202934_2.fastq.gz bc9ffa7506e877e24d48891704beaeb0;1cd0889ea74a340d4056c3422b5dd980 123130992;147880558 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0101 double AmpliTaq Gold DNA half-udg NextSeq 500 PAIRED Targeted-Capture 5244376 ERR11202935 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11202935/ERR11202935_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/035/ERR11202935/ERR11202935_2.fastq.gz f4840469f8ec92960ddda12074bf49d1;86f321239eaf4c1c3b8743dab4d5b5cc 107055111;128528088 +Parker2023 2023 10.1371/journal.ppat.1011404 KRA032 ENA PRJEB61096 ERS14884864 KRA032.A0103 single AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED Targeted-Capture 34240226 ERR11202937 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11202937/ERR11202937_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR112/037/ERR11202937/ERR11202937_2.fastq.gz 360f8370041b6558afd149593a6a8595;da02c63d5f55963d7ae9c6ab6ea15402 553924381;611677182 +Long2023 2023 10.1371/journal.ppat.1011538 Sante Brancorsini SRA PRJNA966239 SRS17532534 LMN01_S415 single AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 26874306 SRR24420453 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/053/SRR24420453/SRR24420453_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/053/SRR24420453/SRR24420453_2.fastq.gz d7b8d3754d7633e119f0a2769bd821a1;917b0e2ee6ad1bf51904061e7ab8d597 673258837;673103704 +Long2023 2023 10.1371/journal.ppat.1011538 Sante Brancorsini SRA PRJNA966239 SRS17532534 LMN01_S301 single AccuPrime Pfx DNA none Illumina HiSeq 1500 PAIRED WGS 1731099 SRR24420454 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/054/SRR24420454/SRR24420454_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR244/054/SRR24420454/SRR24420454_2.fastq.gz 7d67f4001c48a53702e280edb68ddde1;e87eeebc190579aa3323845513e5128b 45760293;45221147 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1845 SRA PRJNA883598 SRS15248955 HERB_1845 double Unknown none NextSeq 500 SINGLE WGS 26083266 SRR21711661 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/061/SRR21721661/SRR21721661.fastq.gz d0a79e7827ddb73b6220ce2a23e40714 701255405 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1852 SRA PRJNA883598 SRS15248956 HERB_1852 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 8020338 SRR21721660 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/060/SRR21721660/SRR21721660.fastq.gz 4e97e0303fbaa346d262e664f8ecd70b 274357796 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1854 SRA PRJNA883598 SRS15248959 HERB_1854 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 6440966 SRR21721657 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/057/SRR21721657/SRR21721657.fastq.gz f4fc3e5526d10841f8500f58ae96651e 230281895 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1859 SRA PRJNA883598 SRS15248960 HERB_1859 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 4752661 SRR21721656 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/056/SRR21721656/SRR21721656.fastq.gz 2bc6b7b859331adf3e7b0b0f5fbdd59b 168302503 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1865 SRA PRJNA883598 SRS15248961 HERB_1865 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 3912063 SRR21721655 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/055/SRR21721655/SRR21721655.fastq.gz 9e1715dfdd60db43bcae63e0861b11c9 151676612 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1884 SRA PRJNA883598 SRS15248962 HERB_1884 double Unknown none NextSeq 500 SINGLE WGS 14920382 SRR21721654 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/054/SRR21721654/SRR21721654.fastq.gz a63d5b897aafe3754063bdccf8789491 366477920 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1911 SRA PRJNA883598 SRS15248963 HERB_1911 double Unknown none NextSeq 500 SINGLE WGS 5972972 SRR21721653 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/053/SRR21721653/SRR21721653.fastq.gz e5e1b9df9f3e3a369859cc8d63474a52 195756499 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1915 SRA PRJNA883598 SRS15248964 HERB_1915 double Unknown none NextSeq 500 SINGLE WGS 7151544 SRR21721652 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/052/SRR21721652/SRR21721652.fastq.gz 892f78532e8e0924aa7fe9a3bff88656 178713143 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1922 SRA PRJNA883598 SRS15248965 HERB_1922 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 17855646 SRR21721651 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/051/SRR21721651/SRR21721651.fastq.gz 154590670a30d3ee14af1d2c0dfdc7fa 583308323 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1946 SRA PRJNA883598 SRS15248966 HERB_1946 double Unknown none NextSeq 500 SINGLE WGS 10729826 SRR21721650 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/050/SRR21721650/SRR21721650.fastq.gz f31a22f48c35afdba9cfbd2d6f87dd73 311169565 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1963 SRA PRJNA883598 SRS15248957 HERB_1963 double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE WGS 4107994 SRR21721659 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/059/SRR21721659/SRR21721659.fastq.gz 718980e28d0c4dc91bd52d1efbc9f70a 139054986 +Campos2023 2023 10.1038/s41467-023-39950-z HERB_1974 SRA PRJNA883598 SRS15248958 HERB_1974 double Unknown none NextSeq 500 SINGLE WGS 9256767 SRR21721658 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR217/058/SRR21721658/SRR21721658.fastq.gz e4530fe1bb2ee93f38c728edf4283d3c 199004045 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_001_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 32567057 DRR046399 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046399/DRR046399.fastq.gz 59098fe5c2d339f49a29f62bb581df0d 3031799168 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_004_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 22029742 DRR046405 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046405/DRR046405.fastq.gz 73f76a8c76f4548200740792cec3e80f 1480013579 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_mtDNA_Capture_R1 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 135268 DRR046406 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046406/DRR046406.fastq.gz 37c506c70b5f4384eac3daf49bbf1806 13168706 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_mtDNA_Capture_R2 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 135268 DRR046407 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046407/DRR046407.fastq.gz b08daf33376d9b8769638c68ef9e1624 14586872 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_index16_R1 double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 356354850 DRR046408 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046408/DRR046408.fastq.gz 792187bcc4f5a0837c33bfa9bcd45ff7 25135887359 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_mtDNA_Capture_R2 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 77847 DRR046411 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046411/DRR046411.fastq.gz a185e6ef0736d5798b73d57eade9aefe 8570877 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_003_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 25994286 DRR046402 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046402/DRR046402.fastq.gz 251cfd9c110f0c258b92986757c5e08e 2236884763 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_001_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 32567057 DRR046398 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046398/DRR046398.fastq.gz dd07acfd074d7ab3de3a737a11a02bbf 2923006982 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_002_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 31133080 DRR046400 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046400/DRR046400.fastq.gz 9baaa4283c72e838b97cec348101b1e6 2739068719 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_002_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 31133080 DRR046401 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046401/DRR046401.fastq.gz 2c7dd699fe0ed1044b150de785c8ac16 2864519935 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_003_R2 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 25994286 DRR046403 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046403/DRR046403.fastq.gz 05f383ec42a1d9c5d73e15c91b867904 2312625893 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A1-Tooth SRA PRJDB4223 DRS021185 Sanganji_131421-3_A1_004_R1 double AmpliTaq Gold DNA none Illumina Genome Analyzer IIx PAIRED WGS 22029742 DRR046404 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046404/DRR046404.fastq.gz 4589fb0baa96aee3f653d2e6de17e5fd 1438715827 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_index16_R2 double AmpliTaq Gold DNA none Illumina HiSeq 2000 PAIRED WGS 356354850 DRR046409 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046409/DRR046409.fastq.gz c66e84985b2b86e506713a055303f3fc 25985687100 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji-A2-Tooth SRA PRJDB4223 DRS021186 Sanganji_131421-3_A2_mtDNA_Capture_R1 double AmpliTaq Gold DNA none Illumina MiSeq PAIRED WGS 77847 DRR046410 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/DRR046/DRR046410/DRR046410.fastq.gz 374b027632e96e155944a5ffff376fc3 7809572 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 163 ERR1937826 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/006/ERR1937826/ERR1937826.fastq.gz 4028690b02008c7d6934e4a399a3c324 8498 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 76673447 ERR1937833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/003/ERR1937833/ERR1937833_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/003/ERR1937833/ERR1937833_2.fastq.gz 9f5d8938ecfab81ff4b06cf5b85ecd84;9b0a31ebf902f6749b3d2bb66fe98583 3888369913;4105585278 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 5422 ERR1937825 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937825/ERR1937825.fastq.gz a0b9ad0f50ea8d3e84968e1a6b48a34f 196674 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE WGS 21 ERR1937828 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/008/ERR1937828/ERR1937828.fastq.gz 0853f9b447d7b2d3ea74c10e8e7b698a 882 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNIII-Tooth ENA PRJEB20294 ERS1647163 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 52435610 ERR1937834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/004/ERR1937834/ERR1937834_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/004/ERR1937834/ERR1937834_2.fastq.gz 8bdc8dc708983ac9334f59ff5d3bca09;9b02c90be8f45c0a9bdcb138459bdd64 2172525415;2376886625 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 BAM double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE WGS 20404 ERR1937827 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/007/ERR1937827/ERR1937827.fastq.gz 6413c8cb99df1ce1762913cadf28329c 537498 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 2_paired_fastq double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 PAIRED WGS 44375613 ERR1937835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937835/ERR1937835_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR193/005/ERR1937835/ERR1937835_2.fastq.gz 227dbeb7889d5b4e2f5188c56d079576;d0d9ee382a5ad825a4431ebfad77ba9f 2421609326;2479467479 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir-Rifeh-KNII-Tooth ENA PRJEB20294 ERS1660772 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 807 ERR1942918 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR194/008/ERR1942918/ERR1942918.fastq.gz 8c002eac0175550cd4e5fd966261b50c 26359 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 318125040 ERR2112574 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112574/ERR2112574.fastq.gz d29e8511b8c860889920240560f28963 11592228429 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320155752 ERR2112575 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112575/ERR2112575.fastq.gz 1c3931ef9c7b3198fd89eed4c4af79aa 11523747356 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 320577112 ERR2112576 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112576/ERR2112576.fastq.gz c01e8e624b5e7e542a6a53060eda2963 11612997118 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 286756923 ERR2112577 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112577/ERR2112577.fastq.gz 1b43fd6bdd9e0f372e0370426e502ae9 10175356811 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Augsburg-Tooth ENA PRJEB19335 ERS1892067 ABI933 double PfuTurbo Cx Hotstart DNA half-udg Illumina HiSeq 4000 SINGLE WGS 165092355 ERR2112578 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112578/ERR2112578.fastq.gz a546c8d02e34ab7ba9bf9b9b70edc110 6042098938 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-004-Tooth ENA PRJEB86458 ERS1906198 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 32788454 ERR2111944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2111944/ERR2111944.fastq.gz 2268b27c14ddaa9fe8ba1994dca180b7 1476338852 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 83657790 ERR2111947 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2111947/ERR2111947.fastq.gz 28d80ed137a4f2749c8df338f1396296 4616384352 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 84678681 ERR2111948 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2111948/ERR2111948.fastq.gz 2670f6ee30cdb2e9cf25194b1d00352f 4487414231 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 41600057 ERR2111950 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2111950/ERR2111950.fastq.gz 7d2f61ffbc3704b514b1ad49c83cc2ea 2283826200 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42454995 ERR2111951 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2111951/ERR2111951.fastq.gz 166f95e2b9def23d98644c5c37f39841 2239935032 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 46432244 ERR2112075 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112075/ERR2112075.fastq.gz c3058a6ab2a74162e841055c2c9871e7 3315636400 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 41968696 ERR2112076 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112076/ERR2112076.fastq.gz c1f0637d92139b565497ff8eb58dc708 3024212774 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42694502 ERR2112077 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112077/ERR2112077.fastq.gz 527ea4fcb4e247423862d8d65850297f 2971810358 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 56519202 ERR2112078 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112078/ERR2112078.fastq.gz 746c40aa7f5364b424a8a010625ab555 4015798460 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 103034192 ERR2112082 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112082/ERR2112082.fastq.gz b494900e3eb4faa8fc519510c3d18044 4339155003 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 48006465 ERR2112095 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2112095/ERR2112095.fastq.gz aa23291e1ffa281f02cb00424cabca88 2904018843 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 46090647 ERR2112097 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/007/ERR2112097/ERR2112097.fastq.gz a3bc3849f6ae72755564f0639badf10b 2763637774 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 34599863 ERR2111945 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/005/ERR2111945/ERR2111945.fastq.gz be2c0610c72a60232d3d2ceacfc45c15 1531332605 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 43607924 ERR2111949 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2111949/ERR2111949.fastq.gz c12312b0e05b7364e4ae34ff58dbed2b 2330733778 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 48025167 ERR2112074 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112074/ERR2112074.fastq.gz 56b44ec8a3f4a84f0e6e52f23a45244f 2650703816 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 51462140 ERR2112079 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/009/ERR2112079/ERR2112079.fastq.gz cb086c299d3dd88bea8b8497712d2f23 3674875735 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 52674925 ERR2112080 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/000/ERR2112080/ERR2112080.fastq.gz 444cfc9e7f1312e42f812bf1e0437f8b 3656995820 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 247085213 ERR2112083 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112083/ERR2112083.fastq.gz 5e871b7f274fd4045af8ca7a99ba6fb1 12125066589 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 156625959 ERR2112084 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112084/ERR2112084.fastq.gz 1f89e2c52b4811dfcc047ed1ee608b7e 7764413478 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 95745866 ERR2112093 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/003/ERR2112093/ERR2112093.fastq.gz 7bd19b4ef5a6ac548a04fe4e67afc7cc 6033829981 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 97073096 ERR2112094 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/004/ERR2112094/ERR2112094.fastq.gz 3d7cae0f6e17f95675644668c8b58c43 5838900641 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 30451552 ERR2185281 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/001/ERR2185281/ERR2185281.fastq.gz ab6526f8ff7e7706029265c64df6ffac 1188674769 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 28674836 ERR2185284 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/004/ERR2185284/ERR2185284.fastq.gz 25cd96b8767c4435b1fa287ffa9a57d9 1206388101 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-005-Tooth ENA PRJEB86458 ERS1906199 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 86740492 ERR2111946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2111946/ERR2111946.fastq.gz 810b089d785ebd1edbad3a41226ce5ad 4637501739 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 50136895 ERR2112081 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112081/ERR2112081.fastq.gz 154863c74e9827eb9fee2b3a630ac19e 2230636146 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 37810056 ERR2112091 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/001/ERR2112091/ERR2112091.fastq.gz 9d9ff02519fdb933fe98adbac42996b3 1904292211 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 101242754 ERR2112092 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/002/ERR2112092/ERR2112092.fastq.gz b40662014d1863d723646aecec72da1b 6139469451 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-012-Tooth ENA PRJEB86458 ERS1906203 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 44839252 ERR2112096 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/006/ERR2112096/ERR2112096.fastq.gz a0e40d36ccb46a36986b6396ccbdef39 2801279215 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-013-Tooth ENA PRJEB86458 ERS1906204 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 42367542 ERR2112098 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR211/008/ERR2112098/ERR2112098.fastq.gz 405950db4d2dd6088e452d76e574ed6b 2206630410 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 GranCanaria-008-Tooth ENA PRJEB86458 ERS1906202 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 16219915 ERR2185282 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/002/ERR2185282/ERR2185282.fastq.gz ae8291e6f7c8dc421db1c5969b9230e3 681016439 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife-011-Tooth ENA PRJEB86458 ERS1906197 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 187683798 ERR2185283 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR218/003/ERR2185283/ERR2185283.fastq.gz 96d19ed679b9b9a6c5b601fe840f571e 6382804778 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 861998 ERR2204611 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/001/ERR2204611/ERR2204611_2.fastq.gz e97363c161e90082e6eb8fa53a3b8a58;939c0a52c40cec8b8cefdb38851435ba 39871514;41647617 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 28118462 ERR2204612 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/002/ERR2204612/ERR2204612_2.fastq.gz ddfc21cae3d74b9d1c80f06f8115a71b;2b337c73947e90b37b4006bfed0e3fb5 1144496374;1271866282 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 2863375 ERR2204613 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/003/ERR2204613/ERR2204613_2.fastq.gz c3c2cd5a50992713d7ed50f5b91dd97b;eb94f2bba3435db0075a3b6fda474505 131797035;136207848 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CUDG double PfuTurbo Cx Hotstart DNA full-udg NextSeq 500 PAIRED Targeted-Capture 96106710 ERR2204614 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204614/ERR2204614_2.fastq.gz cdcbb32ff04e32423a6d04609a70870e;f010594dfbd557e727f45ed8fd262db3 3851279631;4247569192 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tepos_35-Tooth ENA PRJEB23438 ERS2020227 35CnU double PfuTurbo Cx Hotstart DNA none Illumina HiSeq 2000 PAIRED WGS 994328 ERR2204644 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR220/004/ERR2204644/ERR2204644_2.fastq.gz 73d0b651d0d03c55e2dddbe75d77dd9d;0c02751f3c5e30e5c43e352edc178964 73031399;75636413 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva_de_los_Lagos-Tooth ENA PRJEB23467 ERS2059523 unspecified double Phusion Hot Start High-Fidelity DNA none HiSeq X Ten SINGLE Unknown 179251988 ERR2224078 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/008/ERR2224078/ERR2224078.fastq.gz 245587cc316cb175e2eed76a5907d42e 5551553388 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva_de_los_Lagos-Tooth ENA PRJEB23467 ERS2059523 unspecified double Phusion Hot Start High-Fidelity DNA none HiSeq X Ten SINGLE Unknown 1164531241 ERR2225784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/004/ERR2225784/ERR2225784.fastq.gz d028912fb20f3a5c731406ad82d2e363 48849563848 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Yámana-Tooth ENA PRJEB24629 ERS2160137 unspecified double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 2000 SINGLE WGS 808299942 ERR2270785 fastq_all ftp://ftp.sra.ebi.ac.uk/vol1/run/ERR227/ERR2270785/IPY10.All.fastq.gz 3c32116386822aa24ff2efa67e5d2e94 45202276574 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Vác-Mummy-Tissue ENA PRJEB7454 ERS563409 92-A1 double Unknown none Illumina MiSeq PAIRED WGS 20084713 ERR651004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_2.fastq.gz 3f07d29738185963f380f637b9b93065;0d96c823b7998af0b2165fe46b7e542e 2984512816;3476815638 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_10 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 75660984 ERR966295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966295/ERR966295.fastq.gz 3f43def0d896afea489f3c5fccea36c3 3930297733 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_11 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 103486178 ERR966296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966296/ERR966296.fastq.gz b514bc662c122adb6ac42d5acf3b05f0 5330914571 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_13 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 285814147 ERR966298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966298/ERR966298.fastq.gz dc75bf256f29ebbd70954d7bd7ab2c9a 16162263061 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_6 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 30343646 ERR966310 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966310/ERR966310.fastq.gz 6efffec6ad1d62ed52e2cc3d3c5a7f43 1416897788 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_8 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 87962797 ERR966312 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966312/ERR966312.fastq.gz 5ceca13c5c30374209d7ea44e40de87c 4175899212 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_12 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 107286297 ERR966297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966297/ERR966297.fastq.gz ec6261bc595a0d84a6606143492f91ec 5571578708 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_15 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 40472562 ERR966300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966300/ERR966300.fastq.gz 600dc595ac8de4fe232ca1c00c456fec 2368473624 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_17 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 86611474 ERR966302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966302/ERR966302.fastq.gz 1d2c52049d8c8302e8d45b83c2ce7f4f 5140536631 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_2 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 58022324 ERR966305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966305/ERR966305.fastq.gz 9350277d1aafa8c43cec850f9e38f0e1 2756025719 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_20 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 136573362 ERR966306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966306/ERR966306.fastq.gz 98688aecf3d8b0969298d39010220e23 6672345221 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_3 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49940208 ERR966307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966307/ERR966307.fastq.gz ff03f2f79b3c528eb1c98af05a3fad62 2423386088 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_4 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 26872695 ERR966308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966308/ERR966308.fastq.gz 2557624cd4bd5e82ac3e32fc8fa4ed85 1254939750 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_7 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 94822961 ERR966311 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966311/ERR966311.fastq.gz 871dbd8cd245d22c9cdabc166b9118e5 4496790226 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_1 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49502893 ERR966294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966294/ERR966294.fastq.gz a808f03060305f2523287cf004fa29fc 2350014565 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_14 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 23206451 ERR966299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966299/ERR966299.fastq.gz 4139f9e28a3f01f79f1e8fc6163342ef 1361039728 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_16 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 25867706 ERR966301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966301/ERR966301.fastq.gz 142744b3e9bb59d960fb7959e5cadd24 1522488144 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_18 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 100755898 ERR966303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966303/ERR966303.fastq.gz 66be0bbef7e8660498b971e19236b005 5975543012 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_19 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 85601752 ERR966304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966304/ERR966304.fastq.gz 2377b397bc7659809ba3a3b58c9abdda 5175038658 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_5 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 47945651 ERR966309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966309/ERR966309.fastq.gz d27e80a6d72a4e6c366a4481847639df 2206834714 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_9 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 98694708 ERR966313 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966313/ERR966313.fastq.gz 9cfcbea3b01094ef1ab7b0bd30f84c5a 4681565044 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 11472673 ERR966440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966440/ERR966440.fastq.gz 28855b18583116ffa22e1f40fd963278 694295918 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libCAGCTA.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 50343799 ERR966426 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966426/ERR966426.fastq.gz 88d4a682975953ad845683f12590a1d3 2888163703 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 3444716 ERR966430 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966430/ERR966430.fastq.gz 075f7fe98e6ec5cde875bf670cb49c47 201382661 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Marseille-Tooth ENA PRJEB12163 ERS1020860 OBS107_UDG double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 14646710 ERR1193532 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/002/ERR1193532/ERR1193532_2.fastq.gz 884a4afc0b75b86bbb323f58b80a041c;9e5e2bca98fdf7b541b490f5955a9ad3 1149013961;1150891719 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Marseille-Tooth ENA PRJEB12163 ERS1020860 OBS107 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2000 SINGLE Targeted-Capture 851096 ERR1193537 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR119/007/ERR1193537/ERR1193537.fastq.gz 864da17f8807ceecad7368caf2c92997 39236628 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Barcelona-3031-Tooth ENA PRJEB13664 ERS1124787 Barcelona3031 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 61845279 ERR1368878 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/008/ERR1368878/ERR1368878_2.fastq.gz 095af025dc7f11f79502974aa75e7386;4130f9ec25f3df279f8142845961aadb 4422361795;4446780768 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 SLC-France-Tooth ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 203877595 ERR2862150 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/000/ERR2862150/ERR2862150_2.fastq.gz a6112d04b304b2375dae6c34033bbc16;acafcc79f3d021db8f3308d9ac935bcf 11059312752;11017819383 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 SLC-France-Tooth ENA PRJEB24499 ERS2865271 unspecified double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 221791489 ERR2862151 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR286/001/ERR2862151/ERR2862151_2.fastq.gz f80f8e1d0712e6c0f2a65e79acc67ba3;190cc46629e5eda6fef664d6cb80ee3d 11578595157;11538874156 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karolva-Tooth ENA PRJEB32786 ERS3568107 unspecified single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE Unknown 1140330766 ERR3426230 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR342/000/ERR3426230/ERR3426230.fastq.gz a132e833c23eea070bcaacf5ec544fc4 52616619455 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karolva-Tooth ENA PRJEB32786 ERS3568107 unspecified single AccuPrime Pfx DNA none Illumina HiSeq 2500 SINGLE Unknown 171457258 ERR3426214 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR342/004/ERR3426214/ERR3426214.fastq.gz b8738de2667671d5a178a72cadfee9c0 5737682401 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1595-Tooth ENA PRJEB33848 ERS3635963 Abusir1595t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1752726 ERR4374869 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4374869/ERR4374869_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4374869/ERR4374869_2.fastq.gz ae15532ee7d7f77e66e514c3aba99136;7a90231a56f5b797c3b57343139ff922 123648672;117691019 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1671-Tooth ENA PRJEB33848 ERS3636004 Abusir1671t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1782693 ERR4375141 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4375141/ERR4375141_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/001/ERR4375141/ERR4375141_2.fastq.gz 5ae99bc0ce03b22aff0d9850f1fde5d3;175c717414a955be4cf03ec799d76262 125757629;120330029 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1607-Tooth ENA PRJEB33848 ERS3636032 Abusir1607t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1586988 ERR4374914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4374914/ERR4374914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/004/ERR4374914/ERR4374914_2.fastq.gz 1d77a89866d7447f45292a4dec6658a4;55da618b78bfecc4baa4584293980eb2 110209867;107590188 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1655-Tooth ENA PRJEB33848 ERS3635957 Abusir1655t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1945335 ERR4375049 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4375049/ERR4375049_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/009/ERR4375049/ERR4375049_2.fastq.gz f22d9971ef57fe9e47700a8c7457a588;688449cd8b334879880e9020e1ec45e9 131666971;121340094 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1668-Tooth ENA PRJEB33848 ERS3635986 Abusir1668b double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1541347 ERR4375136 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/006/ERR4375136/ERR4375136_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/006/ERR4375136/ERR4375136_2.fastq.gz effef5dfd1a98d96b9e3fe315f3571f1;998c0eb27a55a32b6fe0c9414bfffa84 100349234;96655523 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir1668-Tooth ENA PRJEB33848 ERS3636003 Abusir1668t double Herculase II Fusion DNA none Illumina HiSeq 2500 PAIRED WGS 1713268 ERR4375137 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/007/ERR4375137/ERR4375137_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR437/007/ERR4375137/ERR4375137_2.fastq.gz e0c16b10c7223f0f06dc877b967efade;159f44266cd022b79bcba198793b4426 118529958;117196832 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten PAIRED WGS 526840783 ERR3828670 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/000/ERR3828670/ERR3828670_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/000/ERR3828670/ERR3828670_2.fastq.gz 8bb30abf98faae0b4e32879e73d0fddb;2c14f5f656437db800c7d440b43118ec 32454725484;34339312668 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten PAIRED WGS 28036224 ERR6504159 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR650/009/ERR6504159/ERR6504159.fastq.gz 17a0ca6e5e6bf71c9baf67a3469c9667 1215957980 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi-Tooth ENA PRJEB36297 ERS4255307 DCZM17IV double Unknown none HiSeq X Ten SINGLE WGS 26132707 ERR3828725 bam_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/005/ERR3828725/ERR3828725.fastq.gz bdbd5c57583dd407cfb4fd238f65a64e 1141752081 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga_Cemetery-Tooth ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 191158993 ERR3841646 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/006/ERR3841646/ERR3841646.fastq.gz ad40e5810f4cade26206881f064d781a 8028301308 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga_Cemetery-Tooth ENA PRJEB36413 ERS4266549 H29724 double Unknown half-udg Illumina HiSeq 4000 SINGLE Unknown 7930905 ERR3841647 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR384/007/ERR3841647/ERR3841647.fastq.gz 59264a85b271b4cc44ece2e409ed6257 329376589 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC12-12-Tooth ENA PRJEB37726 ERS4421181 SC79-L1101 single Unknown half-udg HiSeq X Ten PAIRED WGS 285113997 ERR4017942 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/002/ERR4017942/ERR4017942_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/002/ERR4017942/ERR4017942_2.fastq.gz 818b384816f44c7b1879294fd37bd299;0d2e65636f7a46edf753df2e68dd8a5b 18195979831;21200990407 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC12-24-Tooth ENA PRJEB37726 ERS4421183 SC79-L1096 single Unknown half-udg HiSeq X Ten PAIRED WGS 283637918 ERR4017944 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/004/ERR4017944/ERR4017944_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/004/ERR4017944/ERR4017944_2.fastq.gz 8c7a2105a5d34c1160ea68cc6c459a7f;9365adbf8f8538a7a63631f1b3e56bda 18392091676;21164798356 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha-UC8-8168-Tooth ENA PRJEB37726 ERS4421185 SC79-L1099 single Unknown half-udg HiSeq X Ten PAIRED WGS 255728754 ERR4017946 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/006/ERR4017946/ERR4017946_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR401/006/ERR4017946/ERR4017946_2.fastq.gz c931ada4db74d678bc82e71dad544556;e648c62aaad77dd722f482cfd6f68d0e 16428825487;18295596682 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 El_Yaral-Bone SRA PRJNA244165 SRS592075 sample_64 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 50916301 SRR1238559 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/009/SRR1238559/SRR1238559_2.fastq.gz f62e1e3dd90fb7fd0324e920f15ab8bd;b635c5da56ca1b3dd185678c9f9df508 3713855268;3742735134 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chiribaya_Alta-Bone SRA PRJNA244165 SRS591994 sample_54 double AmpliTaq Gold DNA full-udg Illumina HiSeq 2000 PAIRED Targeted-Capture 80406577 SRR1238558 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR123/008/SRR1238558/SRR1238558_2.fastq.gz 72ade0f81eed372eae9fb927a484aa44;5f1fa7e6729773322b52903151f03192 5821824690;5839496681 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA40-Bone SRA PRJNA246597 SRS620293 NA40 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED WGS 12285216 SRR1298750 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/000/SRR1298750/SRR1298750_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/000/SRR1298750/SRR1298750_2.fastq.gz 0a15035340b0c7035d3bb909880b7b0e;0922a0583a8f80ec1508ad759179176f 986232779;962732023 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA42-Bone SRA PRJNA246597 SRS620295 NA42 double Platinum Taq DNA-Polymerase High Fidelity full-udg Illumina HiSeq 2500 PAIRED WGS 8330163 SRR1298752 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/002/SRR1298752/SRR1298752_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR129/002/SRR1298752/SRR1298752_2.fastq.gz 11a8d69baa09d592a540b098a730f291;f2b6407d15e52c48950109f9a0433450 682701697;664051670 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA42-Bone SRA PRJNA246597 SRS620295 NA42 double Platinum Taq DNA-Polymerase High Fidelity full-udg Illumina HiSeq 2500 PAIRED WGS 18730377 SRR1314214 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/004/SRR1314214/SRR1314214_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/004/SRR1314214/SRR1314214_2.fastq.gz d251b55d54eba0b090678c137b7db1a2;3f080f16f1ad832a0a19b532e0f3461f 1571141325;1542055871 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Peru-NA40-Bone SRA PRJNA246597 SRS620293 NA40 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED WGS 22453782 SRR1314212 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/002/SRR1314212/SRR1314212_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR131/002/SRR1314212/SRR1314212_2.fastq.gz 2d98d878adca254a59847145e4714b3e;25bf14d82da531b60a3ca430b90877f4 1871792459;1847705551 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_seperated1 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 5673426 SRR5169886 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/006/SRR5169886/SRR5169886_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/006/SRR5169886/SRR5169886_2.fastq.gz 990dd87c0889dfb683b63a81547e18ff;9920fbe01c61b92ba8b7c655dda5e6ea 371088934;370621153 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_merged2 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 11699427 SRR5169887 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/007/SRR5169887/SRR5169887.fastq.gz 0554a6c3520470fed11f5859dcf6ff60 654473091 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_BAM double Platinum Taq DNA-Polymerase High Fidelity none NextSeq 500 PAIRED Unknown 850652 SRR5182352 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR518/002/SRR5182352/SRR5182352.fastq.gz cacc950730273faf12248a8cf993d847 22154218 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_merged1 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 5047103 SRR5169885 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/005/SRR5169885/SRR5169885.fastq.gz e738d5fc9710f7d66bbd52398aef88ee 303750743 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo_Bonito-Tooth SRA PRJNA353635 SRS1853899 H3661_seperated2 double Platinum Taq DNA-Polymerase High Fidelity none Illumina HiSeq 2500 PAIRED Unknown 14110398 SRR5169888 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/008/SRR5169888/SRR5169888_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR516/008/SRR5169888/SRR5169888_2.fastq.gz dbb0c55e9c1da142301d4bdca8dde663;d17973f6ff1784e11a00e13cb9963253 918308388;927811702 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gniezno-Tooth SRA PRJNA354503 SRS1815300 PCA0162 single Phusion Hot Start High-Fidelity DNA none Illumina Genome Analyzer II SINGLE WGS 6594634 SRR5047069 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR504/009/SRR5047069/SRR5047069.fastq.gz 6df299e1a545cb4a7af8bccc6645696f 441544945 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Punta_Candelero-Tooth SRA PRJNA557308 SRS5212084 PC-119-WGE double AmpliTaq Gold DNA none Illumina HiSeq 2500 PAIRED Targeted-Capture 13553081 SRR9898505 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR989/005/SRR9898505/SRR9898505.fastq.gz 5337cb2a6102a497dda11a6381238cb6 567421190 +Majander2024 2024 10.1038/s41586-023-06965-x ZH1541 ENA PRJEB62647 ERS15463028 ZH1541 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 99718186 ERR11483916 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/016/ERR11483916/ERR11483916_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/016/ERR11483916/ERR11483916_2.fastq.gz 591b393910a76fa0ef87a2857fad02fa;6d634bfb10fa7c7d8d8faa13d469157c 2025791855;2093301951 +Majander2024 2024 10.1038/s41586-023-06965-x ZH1557 ENA PRJEB62647 ERS15463030 ZH1557 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 88468522 ERR11483914 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/014/ERR11483914/ERR11483914_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/014/ERR11483914/ERR11483914_2.fastq.gz 32c7660a773aadc73bd202f4f0cd2831;75894201318f62ffbff2dbda1ff3cbca 1861701209;1936704663 +Majander2024 2024 10.1038/s41586-023-06965-x ZH1390 ENA PRJEB62647 ERS15463029 ZH1390 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 23585502 ERR11483915 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/015/ERR11483915/ERR11483915_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/015/ERR11483915/ERR11483915_2.fastq.gz 6eaabb4849154148d5e876bf0bf6349c;02f0635ede3c7eca60d800459736e3da 502526894;473323928 +Majander2024 2024 10.1038/s41586-023-06965-x ZH1540 ENA PRJEB62647 ERS15463027 ZH1540 double AmpliTaq Gold DNA none NextSeq 500 PAIRED Unknown 20252894 ERR11483917 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/017/ERR11483917/ERR11483917_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR114/017/ERR11483917/ERR11483917_2.fastq.gz 214df0376a6ee084099b8f7356baa8fb;c3a241e2a911c6b672eb2ee21e374b02 436283340;449480697 +Rozwalak2024 2024 10.1038/s41467-023-44370-0 Zape3 GenBank PRJNA561510 BK063464 Zape3 double Phusion Hot Start High-Fidelity DNA none Illumina HiSeq 4000 PAIRED WGS NA BK063464.1 fasta_consensus https://www.ebi.ac.uk/ena/browser/api/fasta/BK063464.1 6e89d2506d7f411168a32546fb9d293d 37316 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-62-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32863597 ERR11660464 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/064/ERR11660464/ERR11660464.fastq.gz 9ed986c9657701718dcc576a4dc43965 2502706005 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-65-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32531149 ERR11660466 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/066/ERR11660466/ERR11660466.fastq.gz 422754336dedfa4ec80b3bf6282de8a7 2385234327 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-143_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 917938 ERR11660430 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/030/ERR11660430/ERR11660430_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/030/ERR11660430/ERR11660430_2.fastq.gz 96a2efac1e1b9ce05f916df6e54dec9d;c82a0333f304e038c8eb5e4811f2382b 25671678;24437025 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-95_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 184046 ERR11660432 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/032/ERR11660432/ERR11660432_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/032/ERR11660432/ERR11660432_2.fastq.gz 0f9192779ed5feba7f329d42e3cf1c8e;f6c7f2c68546cc9c6fd185291f972e1e 4830460;5108568 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-20-PCR2-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32142506 ERR11660461 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/061/ERR11660461/ERR11660461.fastq.gz d5c66ba45e4dae40c1bd2e663908a747 2362843719 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-38-PCR2-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 33934341 ERR11660462 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/062/ERR11660462/ERR11660462.fastq.gz 2026e4973e8a7e367805aec1672da6e7 2488557649 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-64-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 28637756 ERR11660465 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/065/ERR11660465/ERR11660465.fastq.gz 5baf93ea4f279072e3f0d44e0f5980c9 2169685309 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1.forsythia double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 221487 ERR11658336 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/036/ERR11658336/ERR11658336.fastq.gz a9c1c872e5a8b54a9b136b18ddbb2dd3 7896761 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-94_3-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1119516 ERR11660431 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/031/ERR11660431/ERR11660431_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/031/ERR11660431/ERR11660431_2.fastq.gz e99fd3e4ff55970048a320e75a88ff27;e874487f345a12e35afe886a998260c1 31350760;29310998 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-LIB1-71-PCR1-Mi09 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 1114567 ERR11660460 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/060/ERR11660460/ERR11660460.fastq.gz d3ca9d0846ebd58049c3f291e4cd4fc7 57414096 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-F ENA PRJEB64128 ERS15977755 KGH2-F-EX3-UDG1-42-PCR1-Hi5 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 30014392 ERR11660463 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/063/ERR11660463/ERR11660463.fastq.gz debcd720461fe720765ac2815e9bfde3 2269019544 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX1-LIB1-53-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 317102 ERR11660451 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/051/ERR11660451/ERR11660451.fastq.gz 8e7282bb78e8c4087d67258d8b96b811 16721393 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-24-PCR2-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 39319672 ERR11660456 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/056/ERR11660456/ERR11660456.fastq.gz 712c8c61322a62203d3dc31a8de8d595 2931624690 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-25-PCR3-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 33535041 ERR11660457 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/057/ERR11660457/ERR11660457.fastq.gz 3b294f3e8abed23e0fb1a619211b1f1d 2507060016 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-Hi4.mutans double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 3493602 ERR11658334 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/034/ERR11658334/ERR11658334.fastq.gz 7deaa96d038b2e8e1c1cbdf125dc903a 139876792 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX2-LIB1-57-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 443501 ERR11660453 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/053/ERR11660453/ERR11660453.fastq.gz d91aa67d3c80db97e520115cf8075ffe 22940125 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-26-PCR1-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 32567767 ERR11660458 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/058/ERR11660458/ERR11660458.fastq.gz 90832793c9d0500911806db7beac6b14 2427469246 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX1-LIB1-53-PCR3-Mi06 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 794689 ERR11660452 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/052/ERR11660452/ERR11660452.fastq.gz 9731a2510596b75d4164ea64cce32ff6 41743196 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX2-LIB1-57-PCR3-Mi06 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 1427678 ERR11660454 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/054/ERR11660454/ERR11660454.fastq.gz 1e0d78a67386d4cbf76d5973f3833df5 73360473 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-LIB1-41-PCR3-Mi05 double AccuPrime Pfx DNA none Illumina MiSeq SINGLE WGS 168845 ERR11660455 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/055/ERR11660455/ERR11660455.fastq.gz e82b30b08242332fcaf36d6640b4cc0d 8915818 +Jackson2024 2024 10.1093/molbev/msae017 KGH2-B ENA PRJEB64128 ERS15977754 KGH2-B-EX3-UDG1-27-PCR3-Hi4 double AccuPrime Pfx DNA full-udg Illumina HiSeq 2500 SINGLE WGS 26740396 ERR11660459 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/059/ERR11660459/ERR11660459.fastq.gz a6b6e30f5ae051e9ba290b187061e8b8 1991905325 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1.forsythia double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 SINGLE WGS 841339 ERR11658335 fastq_mapped ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/035/ERR11658335/ERR11658335_2.fastq.gz 2dcd1c6118c2a5a91ad32e02d8387bf3;ba697edc60ca5ccc3f8983a54142251d;297b106e886675b36c804f65066ee9c3 17115189;1558991;1587960 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-71_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12001112 ERR11660400 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/000/ERR11660400/ERR11660400_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/000/ERR11660400/ERR11660400_2.fastq.gz a4e7dc0c73ec4b136e186152f41fcc0c;b5a62fcfef7ddf10f1117c13d40492f5 195396449;191847862 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-71_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1250556 ERR11660401 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/001/ERR11660401/ERR11660401_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/001/ERR11660401/ERR11660401_2.fastq.gz 44cd455c9a804c3e59aeb23b2a773a62;8f99d15e040de5d7e95dbd48a1f7ffc2 34620502;33374527 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-76_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12044670 ERR11660411 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/011/ERR11660411/ERR11660411_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/011/ERR11660411/ERR11660411_2.fastq.gz 9eda78dcb6d7033d9c4cdbc5228be3fd;377cb489af3fe8c5ebffd409ed4092b4 197271541;192422500 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-76_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 12038962 ERR11660412 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/012/ERR11660412/ERR11660412_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/012/ERR11660412/ERR11660412_2.fastq.gz 6d1a6fa7200d2c97044703d5927a000f;81ed6a7d67dc3b7b2e2d5a9e3c3ef7fc 196159488;191937897 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KGH1-E-WEX1-UDG1-77_6-PCR1-Nova19-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 1395530 ERR11660416 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/016/ERR11660416/ERR11660416_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/016/ERR11660416/ERR11660416_2.fastq.gz 756ae9a52ad54b6d32c3706fc57b8604;5b8b54a89f3bc4b3b1c9d867283e6c2c 37903659;39540661 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-78_6-PCR1-Nova16-L001 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 6000 PAIRED WGS 11236286 ERR11660417 fastq_hostremoved ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/017/ERR11660417/ERR11660417_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR116/017/ERR11660417/ERR11660417_2.fastq.gz 3d651d50e27f9f10a31c3862abc7a5a3;2887f52434034856f5cd37f11068d0c1 179402805;183343292 +Jackson2024 2024 10.1093/molbev/msae017 KGH1-E ENA PRJEB64128 ERS15977753 KGH1-E-WEX1-UDG1-78_6-PCR1-Nova16-L002 double AccuPrime Pfx DNA full-udg Illumina NovaSeq 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ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/098/SRR28001598/SRR28001598_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/098/SRR28001598/SRR28001598_2.fastq.gz 6e1fec40d1b00b9849f790de212fbaef;4cc9847db4a82bcb5bd3e3c66e042f56 162147728;171102778 +Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H94_1 SRA PRJNA1021938 SRS20486688 MMW_H94_1_cap double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 1782739 SRR28001571 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/071/SRR28001571/SRR28001571_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/071/SRR28001571/SRR28001571_2.fastq.gz 50c5247c2ce1379020d984c96a21d26a;512f593af4db02058317019e74ebbca5 83975345;85935256 +Urban2024 2024 10.1016/j.cub.2024.04.006 MMW_H94_1 SRA PRJNA1021938 SRS20486688 MMW_H94_1_sg double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 3529513 SRR28001591 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/091/SRR28001591/SRR28001591_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/091/SRR28001591/SRR28001591_2.fastq.gz 696354cf94aa4a9f084606d76b2ffa3c;8609b8c0bb99b3171b4a7135a0dfb71c 162033285;169966357 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capKAPA double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE Targeted-Capture 8823598 SRR28001561 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/061/SRR28001561/SRR28001561.fastq.gz 2e5d9ad74ef2ae38529e0de37a327112 395881457 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 7339169 SRR28001570 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/070/SRR28001570/SRR28001570_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/070/SRR28001570/SRR28001570_2.fastq.gz 57a7557b0f9b7b708685d20647c1aeca;e4e3b0cf1e5ca8056eabb08743d452f3 336089684;363686496 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 13883156 SRR28001568 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/068/SRR28001568/SRR28001568_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/068/SRR28001568/SRR28001568_2.fastq.gz 1c9c505d7d564c21c304390f15ae4e0c;334e7c75668a27dc2eca91f65444e9f8 608641869;654087235 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run3 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 3237493 SRR28001566 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/066/SRR28001566/SRR28001566_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/066/SRR28001566/SRR28001566_2.fastq.gz 1321a2e0be625a062e5969f47c108676;9a5ae164bf0f384c888216cff238f867 132230475;143538989 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_capMyBaits_Run4 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 3317272 SRR28001564 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/064/SRR28001564/SRR28001564_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/064/SRR28001564/SRR28001564_2.fastq.gz e23a49764bc751360a919dae08de14c5;862cc45fb142f1a5536861a2bfc4fa02 137664283;154045731 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_sg_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 4246407 SRR28001589 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/089/SRR28001589/SRR28001589_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/089/SRR28001589/SRR28001589_2.fastq.gz 939f80e713295caebc3be5bed71e19c3;8335066159b39fd4374779e8da15b7e8 196998487;209697605 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib1_sg_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 10104162 SRR28001587 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/087/SRR28001587/SRR28001587_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/087/SRR28001587/SRR28001587_2.fastq.gz 9f2bdfada83f9bcd8c072f1a9f894c28;467b3f87c412782a9e5827d372d48b73 434877638;459606127 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capKAPA double PfuTurbo Cx Hotstart DNA none NextSeq 500 SINGLE Targeted-Capture 28493511 SRR28001560 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/060/SRR28001560/SRR28001560.fastq.gz 3028f1a70f4d7197cc64351f870052f0 1252220085 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 73721739 SRR28001569 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/069/SRR28001569/SRR28001569_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/069/SRR28001569/SRR28001569_2.fastq.gz c570960b677437696b43e4e63e787f8d;0c479ac1e0c7ae3b7024115c5124a227 3178845451;3426341754 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run2 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 51916693 SRR28001567 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/067/SRR28001567/SRR28001567_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/067/SRR28001567/SRR28001567_2.fastq.gz f731005acab81baf6e218b8a2f68f207;b2c61e2354fb6088ccbae84dd38e63ca 2269898961;2342544905 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run3 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 14696554 SRR28001565 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/065/SRR28001565/SRR28001565_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/065/SRR28001565/SRR28001565_2.fastq.gz 4fe2246a40d429d70cb741c9373e2c57;4ed0a6f047bc14ac85daaa7b397c1c76 584446190;621416780 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_capMyBaits_Run4 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED Targeted-Capture 14336952 SRR28001563 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/063/SRR28001563/SRR28001563_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/063/SRR28001563/SRR28001563_2.fastq.gz 0c00297d41d8bf0c828226b3cafab542;095e90091cb5d9769ed9f538136275ef 581835802;630491193 +Urban2024 2024 10.1016/j.cub.2024.04.006 SGW_S3_1 SRA PRJNA1021938 SRS20486690 SGW_S3_1_Lib2_sg_Run1 double PfuTurbo Cx Hotstart DNA none NextSeq 500 PAIRED WGS 1604157 SRR28001588 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/088/SRR28001588/SRR28001588_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/SRR280/088/SRR28001588/SRR28001588_2.fastq.gz ca969148cd913848121ae2a4de4e2125;9ea93852575548bfc1536b06e840850c 70368500;72656572 +Sun2024 2024 10.1038/s41467-024-47358-6 XBQM86 GSA PRJCA020853 SAMC3135916 XBQM86 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1202 CRR927065 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927065/CRR927065.fastq.gz 0afb3e7323612b9896dabc793aa9712d 223595 +Sun2024 2024 10.1038/s41467-024-47358-6 MY19 GSA PRJCA020853 SAMC3135917 MY19 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 128 CRR927066 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927066/CRR927066.fastq.gz a700798184068f2c8ff783a7c565929b 29836 +Sun2024 2024 10.1038/s41467-024-47358-6 XHM12 GSA PRJCA020853 SAMC3135918 XHM12 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 303 CRR927067 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927067/CRR927067.fastq.gz 3af7bd9be1083bb13c4bbc343b5eda12 57447 +Sun2024 2024 10.1038/s41467-024-47358-6 XHM16 GSA PRJCA020853 SAMC3135919 XHM16 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 52 CRR927068 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927068/CRR927068.fastq.gz c2c46e4b624381addc13285905ad6a74 11016 +Sun2024 2024 10.1038/s41467-024-47358-6 XHM18 GSA PRJCA020853 SAMC3135920 XHM18 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 16454 CRR927069 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927069/CRR927069.fastq.gz 3bafd57e87750b756a25088f303f47d0 3444176 +Sun2024 2024 10.1038/s41467-024-47358-6 XHM23 GSA PRJCA020853 SAMC3135921 XHM23 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 202 CRR927070 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927070/CRR927070.fastq.gz 79ba0c7ec422300c001e1be7902a5769 39564 +Sun2024 2024 10.1038/s41467-024-47358-6 XHM31 GSA PRJCA020853 SAMC3135922 XHM31 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 211 CRR927071 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927071/CRR927071.fastq.gz 9ff852aa1d06ff2f0cafd209be1b4e62 42376 +Sun2024 2024 10.1038/s41467-024-47358-6 NYM8 GSA PRJCA020853 SAMC3135923 NYM8 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1 CRR927072 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927072/CRR927072.fastq.gz 4410b8fe257a985c7be0dc0517d54e07 9981 +Sun2024 2024 10.1038/s41467-024-47358-6 AT7 GSA PRJCA020853 SAMC3135924 AT7 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 13704 CRR927073 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927073/CRR927073.fastq.gz 5c4641d09265f161b3552927fdec5544 3043171 +Sun2024 2024 10.1038/s41467-024-47358-6 AT19 GSA PRJCA020853 SAMC3135925 AT19 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 10636 CRR927074 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927074/CRR927074.fastq.gz 5a064fe6d09dee1551b68bb8ab7cb2b2 2338977 +Sun2024 2024 10.1038/s41467-024-47358-6 AT24 GSA PRJCA020853 SAMC3135926 AT24 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 61423 CRR927075 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927075/CRR927075.fastq.gz 441277d72a0fb88de70651fc7aa6375b 12309356 +Sun2024 2024 10.1038/s41467-024-47358-6 TJZM25-2 GSA PRJCA020853 SAMC3135927 TJZM25-2 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 4762 CRR927076 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927076/CRR927076.fastq.gz de70d2e8be8401580ac2d57680481fca 1051450 +Sun2024 2024 10.1038/s41467-024-47358-6 XBQM47 GSA PRJCA020853 SAMC3135928 XBQM47 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 387 CRR927077 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927077/CRR927077.fastq.gz c612f1ff29b4b53ad602cc99a7dbc77d 83061 +Sun2024 2024 10.1038/s41467-024-47358-6 XN12 GSA PRJCA020853 SAMC3135929 XN12 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 25849 CRR927078 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927078/CRR927078.fastq.gz 288a847042395d91c438138daaa46825 5262439 +Sun2024 2024 10.1038/s41467-024-47358-6 XFLDM173 GSA PRJCA020853 SAMC3135930 XFLDM173 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 402 CRR927079 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927079/CRR927079.fastq.gz 7041ba33ab1395f72341305234a9687f 81030 +Sun2024 2024 10.1038/s41467-024-47358-6 91KLH18 GSA PRJCA020853 SAMC3135931 91KLH18 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 5629 CRR927080 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927080/CRR927080.fastq.gz b0d11e8798061ce353c12e25349497e1 1231527 +Sun2024 2024 10.1038/s41467-024-47358-6 FLTM18 GSA PRJCA020853 SAMC3135932 FLTM18 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 133 CRR927081 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927081/CRR927081.fastq.gz e2bae3909f732ede9ff7e136566437cb 23624 +Sun2024 2024 10.1038/s41467-024-47358-6 FLTM48 GSA PRJCA020853 SAMC3135933 FLTM48 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 9795 CRR927082 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927082/CRR927082.fastq.gz dd453ddb39f0e9471ed1c457bd45aad7 2229530 +Sun2024 2024 10.1038/s41467-024-47358-6 FLTM97 GSA PRJCA020853 SAMC3135934 FLTM97 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 256 CRR927083 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927083/CRR927083.fastq.gz 61cdf7d3027fc72634938a0bfb75c566 46564 +Sun2024 2024 10.1038/s41467-024-47358-6 FLTM101 GSA PRJCA020853 SAMC3135935 FLTM101 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 13700 CRR927084 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927084/CRR927084.fastq.gz 3dccd8a09553e1fd4c3c4f841de45688 3278731 +Sun2024 2024 10.1038/s41467-024-47358-6 96NVZIM6 GSA PRJCA020853 SAMC3135946 96NVZIM6 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 380 CRR927095 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927095/CRR927095.fastq.gz 089be53544d5f2695c9ad4712b0d3286 67280 +Sun2024 2024 10.1038/s41467-024-47358-6 JHM2098 GSA PRJCA020853 SAMC3135947 JHM2098 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 789 CRR927096 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927096/CRR927096.fastq.gz 8f518f8eba35623ac1f13e9dab4d8fcb 167009 +Sun2024 2024 10.1038/s41467-024-47358-6 SBSM101 GSA PRJCA020853 SAMC3135948 SBSM101 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 1334 CRR927097 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927097/CRR927097.fastq.gz 442a689c042bca7607c85169f5322bf3 294255 +Sun2024 2024 10.1038/s41467-024-47358-6 HHM29 GSA PRJCA020853 SAMC3135949 HHM29 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 3216 CRR927098 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927098/CRR927098.fastq.gz 0067075d17fc979e181674515a7101a6 585862 +Sun2024 2024 10.1038/s41467-024-47358-6 98JJLM9 GSA PRJCA020853 SAMC3135936 98JJLM9 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 5035 CRR927085 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927085/CRR927085.fastq.gz 8401b510716d51a40230294e09dbc85d 907443 +Sun2024 2024 10.1038/s41467-024-47358-6 95JJLM34 GSA PRJCA020853 SAMC3135937 95JJLM34 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 232 CRR927086 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927086/CRR927086.fastq.gz 6c17d6eeca569489e6fb2438a0c1962e 44492 +Sun2024 2024 10.1038/s41467-024-47358-6 95JJLM51 GSA PRJCA020853 SAMC3135938 95JJLM51 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 100 CRR927087 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927087/CRR927087.fastq.gz 45964c289765966b9e886f52ceddf7d3 18943 +Sun2024 2024 10.1038/s41467-024-47358-6 MY12 GSA PRJCA020853 SAMC3135939 MY12 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 14201 CRR927088 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927088/CRR927088.fastq.gz 0f2e470e393b8d18ed6c23a89301f6ee 2824101 +Sun2024 2024 10.1038/s41467-024-47358-6 MY17 GSA PRJCA020853 SAMC3135940 MY17 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 206 CRR927089 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927089/CRR927089.fastq.gz ea3e8717718bb5d2f0ebd683051bf987 44352 +Sun2024 2024 10.1038/s41467-024-47358-6 ZQM16 GSA PRJCA020853 SAMC3135941 ZQM16 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 658 CRR927090 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927090/CRR927090.fastq.gz 68fd0e51e576017dcbf2a657cf0e2a26 157527 +Sun2024 2024 10.1038/s41467-024-47358-6 XBQM20 GSA PRJCA020853 SAMC3135942 XBQM20 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 275 CRR927091 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927091/CRR927091.fastq.gz 0d216dc263ec208aa723dcd55999f743 59158 +Sun2024 2024 10.1038/s41467-024-47358-6 XBQM46 GSA PRJCA020853 SAMC3135943 XBQM46 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 16540 CRR927092 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927092/CRR927092.fastq.gz 8abe20d7ad71529e7606cf357155ccbc 3868947 +Sun2024 2024 10.1038/s41467-024-47358-6 XBQM125 GSA PRJCA020853 SAMC3135944 XBQM125 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 343 CRR927093 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927093/CRR927093.fastq.gz 45efa889dc53958b1e64eb13b3a4fbb2 90445 +Sun2024 2024 10.1038/s41467-024-47358-6 11KBM13 GSA PRJCA020853 SAMC3135945 11KBM13 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 1690 CRR927094 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927094/CRR927094.fastq.gz c7360f598593b3e4980300f34bca35e4 254052 +Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L5 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 145317698 ERR6466112 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz e4e00eb66e236b20020f6d12323ff24d 5064443689 +Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L3 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 164415447 ERR6466110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz 3387cbb54cd5593384586c3f70787405 6026604046 +Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L1 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 9413628 ERR6466108 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz 082fa661d3351c0fac22e2e922dc3795 342573885 +Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L2 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 123717709 ERR6466109 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz 267fe0d4b684a1cf765ae560abdfbbc3 4352735230 +Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L4 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 141415855 ERR6466111 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz 7bed95eb12f3d17c93fd6d47c5edfd04 4974034411 +White2021 2021 10.3390/biology10121324 B2_B3 ENA PRJEB49091 ERS9769380 L022 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 172363072 ERR13663673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_2.fastq.gz 93fe32a1e7baafdbe2ab5fde69a6d998;47cf6d5fec371200015a493a0839c828 4381516936;4643855551 +White2021 2021 10.3390/biology10121324 B2_B5 ENA PRJEB49091 ERS9769381 L023 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 165002236 ERR13663674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_2.fastq.gz 370f2ee1d8d3929d4999d1ef6ba795f5;0390ac309d270d11f8ef01d1a98fe74f 4143803128;4491981331 +White2021 2021 10.3390/biology10121324 B2_B6 ENA PRJEB49091 ERS9769382 L024 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 164114498 ERR13663676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_2.fastq.gz abafcc2b76f2d56f01e5c6ed95f0f20c;e65f30975fa8ff540a9083b77b25646b 4147933772;4482524602 +White2021 2021 10.3390/biology10121324 B2_B6 ENA PRJEB49091 ERS9769382 L024-B double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 108865268 ERR13663675 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/075/ERR13663675/ERR13663675_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/075/ERR13663675/ERR13663675_2.fastq.gz 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AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 407857327 ERR13081220 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/020/ERR13081220/ERR13081220.fastq.gz 5175e567917874e58afc0ba7d0842df2 10971181148 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_1 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 825408927 ERR13081216 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/016/ERR13081216/ERR13081216.fastq.gz 6cc72b1013107335a732b1de3c42315b 32378107839 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 779197269 ERR13081217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/017/ERR13081217/ERR13081217.fastq.gz e3716b3fcc0dc508355bac4066e98440 30780770975 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_3 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 331237067 ERR13081218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/018/ERR13081218/ERR13081218.fastq.gz 859d36af02ca9bc64a77a6198d647339 13693431199 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_4 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 264407276 ERR13081219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/019/ERR13081219/ERR13081219.fastq.gz e24316d796fcb34c2594f4aef1dc1a85 10868287934 +Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 37042575 ERR11752794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/094/ERR11752794/ERR11752794.fastq.gz 61b28af972bb99c8af64f6cc137cc84f 1221430231 +Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 12385850 ERR11752829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/029/ERR11752829/ERR11752829.fastq.gz f33fbe0a91a977678b8b00eb598edc47 478376457 +Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14284810 ERR11752821 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/021/ERR11752821/ERR11752821.fastq.gz 42a4d8479b85314b773b2154ed2ac4ab 797876394 +Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 17498050 ERR11752819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/019/ERR11752819/ERR11752819.fastq.gz 0f53118d59d4fa310bd8ad8985d30f60 780976768 +Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13354174 ERR11752820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/020/ERR11752820/ERR11752820.fastq.gz 774102835d045e5c1265d564dcda39db 705048039 +Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 4009656 ERR11752826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/026/ERR11752826/ERR11752826.fastq.gz ffbdb5ba8066de958196e658c220b052 172669974 +Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14918027 ERR11752801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/001/ERR11752801/ERR11752801.fastq.gz 233585ed450ade62105cad34d7657114 665276656 +Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 399816 ERR11752836 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/036/ERR11752836/ERR11752836.fastq.gz 8909d81e09ec7678b427cb94b06c1a7f 21075785 +Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 31778764 ERR11752802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/002/ERR11752802/ERR11752802.fastq.gz a753c7376d611562c9dfad5c49231b29 1448491519 +Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1382753 ERR11752837 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/037/ERR11752837/ERR11752837.fastq.gz 61712026cb96f12ff8419fd49abcea5f 71239939 +Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13580762 ERR11752812 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/012/ERR11752812/ERR11752812.fastq.gz 9cde7f94d06fe759c11f7743c84cc5ba 481816518 +Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19048033 ERR11752813 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/013/ERR11752813/ERR11752813.fastq.gz 5062d1c7d9b19cae8d3960a71f99217f 754542823 +Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1180056 ERR11752789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/089/ERR11752789/ERR11752789.fastq.gz 9583cbef85f1928ba764c31e6c694ffc 50854724 +Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 21850387 ERR11752811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/011/ERR11752811/ERR11752811.fastq.gz c94158533a06984bbade6264a79baca9 849503959 +Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7502551 ERR11752800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/000/ERR11752800/ERR11752800.fastq.gz 70996dd13cc662f87f82d8e15e32d074 255227717 +Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 514773 ERR11752835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/035/ERR11752835/ERR11752835.fastq.gz cf7ae7385254fbc368f1ad58ad8f2305 25314972 +Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 6260607 ERR11752830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/030/ERR11752830/ERR11752830.fastq.gz 4278f73e393ffb4c1997334d63da02eb 230231901 +Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 2755487 ERR11752795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/095/ERR11752795/ERR11752795.fastq.gz af6467ca96f0cde487fcaeaa46f04deb 82930819 +Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1271624 ERR11752838 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/038/ERR11752838/ERR11752838.fastq.gz 9a858ecc34f945de0db706a7a6c837f2 68021197 +Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 18536478 ERR11752803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/003/ERR11752803/ERR11752803.fastq.gz f9f21a911e4325b6774abc9ba4100f16 951574389 +Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 15068644 ERR11752810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/010/ERR11752810/ERR11752810.fastq.gz 2d861ef1204de1972cf66d010b7bfb46 842427926 +Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 39436478 ERR11752799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/099/ERR11752799/ERR11752799.fastq.gz ebf2be69af0e70d81d07de899065e9e6 1579984549 +Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19370251 ERR11752809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/009/ERR11752809/ERR11752809.fastq.gz f5c41bfb006fbb7529f7053cfeebaa69 1031334963 +Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 992802 ERR11752834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/034/ERR11752834/ERR11752834.fastq.gz a9094c2a2c8d5916a9e4967db9c6bfd5 55769718 +Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 10061322 ERR11752808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/008/ERR11752808/ERR11752808.fastq.gz 4a92fe502c283d7f77a22c715a045041 415208529 +Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 12046398 ERR11752807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/007/ERR11752807/ERR11752807.fastq.gz 17c916719a2009fbc32f83edd3521778 499609022 +Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1361554 ERR11752833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/033/ERR11752833/ERR11752833.fastq.gz 887d9732eef613f5df159e67ed16cf21 49122284 +Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 6500466 ERR11752798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/098/ERR11752798/ERR11752798.fastq.gz 80ab9700892ff2a1b27ece222d9a634e 196241935 +Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13990806 ERR11752818 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/018/ERR11752818/ERR11752818.fastq.gz b5d7892251467072310d35bc23b9da79 729548479 +Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7352560 ERR11752816 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/016/ERR11752816/ERR11752816.fastq.gz 45dc0bb7e87a7b35f038f29c55609a25 327426658 +Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 8931251 ERR11752817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/017/ERR11752817/ERR11752817.fastq.gz 562a8b2c522e044fc2a9566eac666574 485267477 +Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 5200014 ERR11752823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/023/ERR11752823/ERR11752823.fastq.gz 3225e74fd871ab61f8e58b3a2f2b93d0 212944176 +Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9537030 ERR11752814 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/014/ERR11752814/ERR11752814.fastq.gz ffb3748704649acb8a5f278187f58170 473911967 +Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9878005 ERR11752815 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/015/ERR11752815/ERR11752815.fastq.gz 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mode 100644 index 000000000..2d68ef353 --- /dev/null +++ b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv @@ -0,0 +1,736 @@ +project_name publication_year publication_doi site_name latitude longitude geo_loc_name sample_name sample_host sample_age sample_age_doi singlegenome_domain singlegenome_species material genome_type archive data_type archive_project archive_accession +Schuenemann2013 2013 10.1126/science.1238286 Sigtuna 59.618 17.726 Sweden 3077 Homo sapiens 900 10.1126/science.1238286 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA200950 SRS418834 +Schuenemann2013 2013 10.1126/science.1238286 St. Jørgen cemetery, Odense 55.399 10.406 Denmark Jorgen_625 Homo sapiens 600 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS418854 +Schuenemann2013 2013 10.1126/science.1238286 Refshale 56.193 9.394 Denmark Refshale_16 Homo sapiens 900 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS419262,SRS418858,SRS418859 +Schuenemann2013 2013 10.1126/science.1238286 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom SK2 Homo sapiens 700 10.1126/science.1238286 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA200950 SRS418843 +Schuenemann2013 2013 10.1126/science.1238286 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom SK8 Homo sapiens 1000 10.1126/science.1238286 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA200950 SRS418845 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Szentes-Kistőke 46.715 20.281 Hungary SK11 Homo sapiens 1300 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667046 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Necropoli Vicenne Campochiaro 41.564 14.498 Italy T18 Homo sapiens 1300 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667044 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Prušánky 48.831 16.982 Czechia Body 188 Homo sapiens 1100 10.1016/j.meegid.2015.02.001 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667047 +Schuenemann2018 2018 10.1371/journal.ppat.1006997 Great Chesterford 52.063 0.193 United Kingdom GC96 Homo sapiens 1500 10.1371/journal.pone.0124282 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA417381 SRS2667045 +Warinner2014 2014 10.1038/ng.2906 Dalheim 51.565 8.84 Germany G12 Homo sapiens 900 10.1038/ng.2906 bacteria Tannerella forsythia tooth chromosome SRA raw PRJNA216965 SRS473747,SRS473746,SRS473748,SRS473749,SRS473750 +Bos2014 2014 10.1038/nature13591 El Yaral -17.41 -71.092 Peru 64 Homo sapiens 900 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS592075 +Bos2014 2014 10.1038/nature13591 El Algodonal -17.583 -71.21 Peru 58 Homo sapiens 1000 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS591992 +Bos2014 2014 10.1038/nature13591 Chiribaya Alta -17.621 -71.269 Peru 54 Homo sapiens 900 10.1038/nature13591 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA244165 SRS591994 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Rasshevatskiy 45.569 41.03 Russia RK1001 Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892069 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Beli Manastir-Popova zemlja 45.77 18.61 Croatia GEN72 Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892068 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Gyvakarai 55.913 24.89 Lithuania Gyvakarai1 Homo sapiens 4000 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892064 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Kunila 58.616 23.796 Estonia KunilaII Homo sapiens 4000 10.1016/j.cub.2017.10.025 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892065 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Haunstetten Unterer Talweg 85 48.318 10.891 Germany 1343UnTal85 Homo sapiens 3800 10.1371/journal.pone.0139705 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892067 +AndradesValtuena2017 2017 10.1016/j.cub.2017.10.025 Haunstetten Postillionstrasse 6 48.308 10.893 Germany 6Post Homo sapiens 3600 10.1371/journal.pone.0139705 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB19335 ERS1892066 +Spyrou2018 2018 10.1038/s41467-018-04550-9 Mikhailovsky II burial site 53.2 50.2 Russia RT5 Homo sapiens 3500 10.1038/s41467-018-04550-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24296 ERS2106903 +Spyrou2018 2018 10.1038/s41467-018-04550-9 Mikhailovsky II burial site 53.2 50.2 Russia RT6 Homo sapiens 3500 10.1038/s41467-018-04550-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24296 ERS2106904 +Rascovan2019 2019 10.1016/j.cell.2018.11.005 Gökhem 94:1, Frälsegården 58.173 13.407 Sweden Gok2 Homo sapiens 4400 10.1016/j.cell.2018.11.005 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB6090 ERS434180 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Sope 59.408 27.026 Estonia RISE00 Homo sapiens 4000 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848971 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Chociwel 50.796 17.094 Poland RISE139 Homo sapiens 3600 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848972 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bulanovo 52.453 55.16 Russia RISE386 Homo sapiens 3800 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848973 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Kapan 39.2 46.4 Armenia RISE397 Homo sapiens 2800 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848974 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Kytmanovo 53.456 85.447 Russia RISE505 Homo sapiens 3400 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848975 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bateni 54.584 90.775 Russia RISE509 Homo sapiens 4200 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848976 +Rasmussen2015 2015 10.1016/j.cell.2015.10.009 Bateni 54.584 90.775 Russia RISE511 Homo sapiens 2900 10.1038/nature14507 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB10885 ERS848977 +Yu2020 2020 10.1016/j.cell.2020.04.037 Glazkovskoe Predmestie Site 52.279 104.251 Russia GLZ001 Homo sapiens 4600 10.1016/j.cell.2020.04.037 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37007 ERS4540520 +Yu2020 2020 10.1016/j.cell.2020.04.037 Glazkovskoe Predmestie Site 52.279 104.251 Russia GLZ002 Homo sapiens 4400 10.1016/j.cell.2020.04.037 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37007 ERS4540521 +Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod1 Homo sapiens 800 10.7554/eLife.20983 bacteria Gardnerella vaginalis calcified nodule chromosome SRA raw PRJNA352376 SRS1779841,SRS1779840 +Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod1 Homo sapiens 800 10.7554/eLife.20983 bacteria Staphylococcus saprophyticus calcified nodule chromosome SRA raw PRJNA352376 SRS1779841,SRS1779840 +Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod2 Homo sapiens 800 10.7554/eLife.20983 bacteria Gardnerella vaginalis calcified nodule chromosome SRA raw PRJNA352376 SRS1779846,SRS1779844 +Devault2017 2017 10.7554/eLife.20983 Troy 39.953 26.236 Turkey Nod2 Homo sapiens 800 10.7554/eLife.20983 bacteria Staphylococcus saprophyticus calcified nodule chromosome SRA raw PRJNA352376 SRS1779846,SRS1779844 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Bulanovo 52.453 55.16 Russia RISE387 Homo sapiens 3800 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992447 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Sandorfalva-Eperjes 46.344 20.162 Hungary DA195 Homo sapiens 2500 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992441 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Osterhofen-Altenmarkt 48.691 13.061 Germany RISE563 Homo sapiens 4000 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992443 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Szàzhalombatta-Földvàr 47.372 18.962 Hungary RISE254 Homo sapiens 3600 10.1038/s41586-018-0097-z virus Hepatitis B virus bone chromosome GenBank consensus,assembly PRJEB25584 LT992459 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Karasyur 46.997 66.285 Kazakhstan DA29 Homo sapiens 800 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992438 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Halvay 3 52.836 62.893 Kazakhstan DA27 Homo sapiens 1600 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992439 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Poprad 49.077 20.317 Slovakia DA119 Homo sapiens 1500 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992440 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Omnogobi 42.525 105.18 Mongolia DA45 Homo sapiens 2000 10.1038/s41586-018-0097-z virus Hepatitis B virus bone chromosome GenBank consensus,assembly PRJEB25584 LT992442 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Szczepankowice 50.948 16.943 Poland RISE154 Homo sapiens 3500 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992455 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Keden 41.428 75.329 Kyrgyzstan DA51 Homo sapiens 2200 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992444 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Bulanovo 52.453 55.16 Russia RISE386 Homo sapiens 3800 10.1038/s41586-018-0097-z virus Hepatitis B virus tooth chromosome GenBank consensus,assembly PRJEB25584 LT992448 +Muhlemann2018 2018 10.1038/s41586-018-0097-z Butakty 43.202 76.981 Kazakhstan DA222 Homo sapiens 1100 10.1038/s41586-018-0097-z virus Hepatitis B virus unknown chromosome GenBank consensus,assembly PRJEB25584 LT992454 +Dux2020 2020 10.1126/science.aba9411 Berlin 52.51 13.4 Germany BMM 655/1912 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus lung tissue chromosome ENA raw PRJEB36265 ERS4249335 +Dux2020 2020 10.1126/science.aba9411 Prague 50.06 14.46 Czechia MVi/Prague.CZE/60/1 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus isolate chromosome ENA raw PRJEB36265 ERS4249362 +Dux2020 2020 10.1126/science.aba9411 Prague 50.06 14.46 Czechia Mvi/Prague.CZE/60/2 Homo sapiens 100 10.1126/science.aba9411 virus Measles morbillivirus isolate chromosome ENA raw PRJEB36265 ERS4249363 +Maixner2016 2016 10.1126/science.aad2545 Hauslabjoch 46.773 10.837 Italy Iceman Stomach/Intestine (1054/1051/1063/1036) Homo sapiens 5300 10.1126/science.aad2545 bacteria Helicobacter pylori digestive tract contents chromosome ENA raw PRJEB11511 ERS942275,ERS942266,ERS942283,ERS942284,ERS942285,ERS942286,ERS942287,ERS942288,ERS942289,ERS942290,ERS942291,ERS942292,ERS942293,ERS942294,ERS942267,ERS942277,ERS942270,ERS942274,ERS942269,ERS942268,ERS942271,ERS942265,ERS942273,ERS942272,ERS942281,ERS942282 +Guellil2018 2018 10.1073/pnas.1807266115 St Nicolay’s ALT St Clement's Church, Oslo 59.904 10.765 Norway OSL9a Homo sapiens 400 10.1073/pnas.1807266115 bacteria Borrelia recurrentis tooth chromosome ENA raw PRJEB24501 ERS2591211 +Guellil2018 2018 10.1073/pnas.1807266115 St Nicolay’s ALT St Clement's Church, Oslo 59.904 10.765 Norway OSL9b Homo sapiens 400 10.1073/pnas.1807266116 bacteria Borrelia recurrentis tooth chromosome ENA raw PRJEB24501 ERS2591210 +Duggan2016 2016 10.1016/j.cub.2016.10.061 Dominican Church of the Holy Spirit of Vilnius 54.681 25.284 Lithuania VD21 Homo sapiens 300 10.1016/j.cub.2016.10.061 virus Variola virus skin chromosome SRA raw PRJNA348754 SRS1749354 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 Uch-Kurbu 42.159 77.406 Kyrgyzstan DA101 Homo sapiens 1800 10.1038/s41586-018-0094-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB25891 ERS2367268 +deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 Unknown 42.861 44.185 Russia DA147 Homo sapiens 1300 10.1038/s41586-018-0094-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB25891 ERS2367269 +Key2020 2020 10.1038/s41559-020-1106-9 Murzikhinsky II 55.304 50.086 Russia MUR009 Homo sapiens 5700 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967963 +Key2020 2020 10.1038/s41559-020-1106-9 Murzikhinsky II 55.304 50.086 Russia MUR019 Homo sapiens 5600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967964 +Key2020 2020 10.1038/s41559-020-1106-9 Ipatovo 3 45.685 42.921 Russia IV3002 Homo sapiens 4600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967967 +Key2020 2020 10.1038/s41559-020-1106-9 Ikiztepe 41.612 35.87 Turkey IKI003 Homo sapiens 4500 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967961 +Key2020 2020 10.1038/s41559-020-1106-9 Oberbipp 47.262 7.659 Switzerland OBP001 Homo sapiens 4600 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967965 +Key2020 2020 10.1038/s41559-020-1106-9 Su Asedazzu 39.512 9.145 Italy SUA004 Homo sapiens 3800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967966 +Key2020 2020 10.1038/s41559-020-1106-9 Marinskaya 3 43.905 43.521 Russia MK3001 Homo sapiens 2800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967962 +Key2020 2020 10.1038/s41559-020-1106-9 Chiusi 43.016 11.95 Italy ETR001 Homo sapiens 1800 10.1038/s41559-020-1106-9 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB35216 ERS3967960 +Barquera2020 2020 10.1016/j.cub.2020.04.002 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN003 Homo sapiens 500 10.1016/j.cub.2020.04.002 bacteria Treponema pallidum tooth chromosome ENA raw PRJEB37490 ERS4529000,ERS4529001 +Barquera2020 2020 10.1016/j.cub.2020.04.002 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN001 Homo sapiens 500 10.1016/j.cub.2020.04.002 virus Hepatitis B virus tooth chromosome ENA raw PRJEB37490 ERS4528997,ERS4528998 +KrauseKyora2018 2018 10.7554/eLife.36666 Karsdorf 51.27 11.65 Germany Karsdorf Homo sapiens 7000 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200179 +KrauseKyora2018 2018 10.7554/eLife.36666 Sorsum 52.27 9.61 Germany Sorsum Homo sapiens 5100 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200180 +KrauseKyora2018 2018 10.7554/eLife.36666 Petersberg 47.71 12.12 Germany Petersberg Homo sapiens 900 10.7554/eLife.36666 virus Hepatitis B virus tooth chromosome ENA raw PRJEB24921 ERS2200178 +Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU007 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398261 +Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU010 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4410876 +Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU020 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398262 +Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU025 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Yersinia pestis tooth chromosome ENA raw PRJEB37508 ERS4398263 +Giffin2020 2020 10.1038/s41598-020-66012-x Aguonu g. 10 54.675 25.277 Lithuania AGU007 Homo sapiens 400 10.1038/s41598-020-66012-x bacteria Treponema pallidum tooth chromosome ENA raw PRJEB37508 ERS4398260 +Feldman2016 2016 10.1093/molbev/msw170 Altenerding 48.287 11.903 Germany AE1175 Homo sapiens 1500 10.1093/molbev/msw170 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB14851 ERS1266114 +BarGal2012 2012 10.1002/hep.25852 Yangju 37.8 127.0 South Korea Yangju child mummy Homo sapiens 300 10.1002/hep.25852 virus Hepatitis B virus liver chromosome GenBank consensus Unknown JN315779 +Keller2019 2019 10.1073/pnas.1820447116 Dittenheim 49.055 10.792 Germany DIT003.B Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465379 +Keller2019 2019 10.1073/pnas.1820447116 Dittenheim 49.055 10.792 Germany DIT004 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465380,ERS3465381 +Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI001.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465382 +Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI003.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465383 +Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI004.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465384 +Keller2019 2019 10.1073/pnas.1820447116 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465385 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD001.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465386 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD002.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465387 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD007.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465388 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD013.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465389 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD019.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465390 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD020.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465391 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD021.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465392 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD022.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465393 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD023.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465394 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD024.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465395 +Keller2019 2019 10.1073/pnas.1820447116 Saint-Doulchard Le Pressoir 47.105 2.357 France LSD026.A Homo sapiens 1300 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465396 +Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC001 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465397,ERS3465398 +Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC005 merged Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465399,ERS3465400,ERS3465401 +Keller2019 2019 10.1073/pnas.1820447116 Lunel-Viel (Quartier centrale) 43.677 4.092 France LVC006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465402 +Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET004.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465404 +Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465405 +Keller2019 2019 10.1073/pnas.1820447116 Petting 47.912 12.816 Germany PET006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465406 +Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT002.A Homo sapiens 1600 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465407 +Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT003.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465408 +Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT004.A Homo sapiens 1600 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465409 +Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT005.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465410 +Keller2019 2019 10.1073/pnas.1820447116 Unterthürheim 48.599 10.706 Germany UNT006.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465411 +Keller2019 2019 10.1073/pnas.1820447116 Valencia 39.476 -0.374 Spain VAL001.B Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465403 +Keller2019 2019 10.1073/pnas.1820447116 Waging 47.934 12.733 Germany WAG001.A Homo sapiens 1500 10.1073/pnas.1820447116 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29991 ERS3465412 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Tian Shan 41.501 75.794 Kyrgyzstan DA66 Homo sapiens 1500 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA66 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA337 Homo sapiens 4000 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA337 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Gotland 57.63 18.28 Sweden VK477 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK477 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Brandýsek 50.18 14.15 Czechia RISE569 Homo sapiens 1300 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 RISE569 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Bazaiha, Krasnoyarsk 55.951 92.784 Russia NEO105 Homo sapiens 500 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 NEO105 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA251 Homo sapiens 6900 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA251 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Eastern Settlement 60.99 -45.42 Greenland VK6 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK6 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Bodzia 52.703 18.887 Poland VK154 Homo sapiens 1000 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK154 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Oxford 51.756 -1.257 United Kingdom VK143 Homo sapiens 1100 10.1073/pnas.1804921115 virus Parvovirus B19 tooth chromosome GitHub reference_aligned,consensus acorg/parvo-2018 VK143 +Muhlemann2018b 2018 10.1073/pnas.1804921115 Lake Baikal (Shamanka II) 51.698 103.703 Russia DA336 Homo sapiens 4100 10.1073/pnas.1804921115 virus Parvovirus B19 unknown chromosome GitHub reference_aligned,consensus acorg/parvo-2018 DA336 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 Aschheim-Bajuwarenring 48.172 11.715 Germany A120 Homo sapiens 1400 10.1016/S1473-3099(13)70323-2 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA231474 SRS514388,SRS514389,SRS514393,SRS514395,SRS514397,SRS514398,SRS514399,SRS514400,SRS514401,SRS514402,SRS514403,SRS514404,SRS514423,SRS514424,SRS514425,SRS514426,SRS514427,SRS514429,SRS514430,SRS514431,SRS514435,SRS514436,SRS514437,SRS514438,SRS514439,SRS514440,SRS514441,SRS514442,SRS514507,SRS514506,SRS514505,SRS514444 +Wagner2014 2014 10.1016/S1473-3099(13)70323-2 Aschheim-Bajuwarenring 48.172 11.715 Germany A76 Homo sapiens 1400 10.1016/S1473-3099(13)70323-2 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA231474 SRS514391,SRS514392,SRS514432,SRS514443,SRS514508 +Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_11972 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259946 +Bos2011 2011 10.1038/nature10549 Abbey St. Mary Graces 51.508 -0.069 United Kingdom ES_6330 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259944 +Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_8124 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259947 +Bos2011 2011 10.1038/nature10549 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES_8291 Homo sapiens 600 10.1038/nature10549 bacteria Yersinia pestis tooth chromosome SRA raw SRP008060 SRS259945 +Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS107 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020860 +Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS110 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020861 +Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS116 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020862 +Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS124 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020863 +Bos2016 2016 10.7554/eLife.12994.001 l'Observance 43.301 5.367 France OBS137 Homo sapiens 200 10.7554/eLife.12994.001 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB12163 ERS1020864 +PattersonRoss2018 2018 10.1371/journal.ppat.1006750 Basilica of St. Domenico Maggiore, Naples 40.848 14.254 Italy NASD24 Homo sapiens 400 10.1371/journal.ppat.1006750 virus Hepatitis B virus tissue chromosome GenBank consensus Unknown MG585269 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_10 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020211 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_11 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020212 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_14 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020215 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_20 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020221 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_34 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020226 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_35 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020227 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_36 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020228 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_37 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020229 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_38 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020230 +Vagene2018 2018 10.1038/s41559-017-0446-6 Teposcolula-Yucundaa 17.499 -97.467 Mexico Tepos_41 Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB23438 ERS2020231 +DeDios2020 2020 10.1016/j.meegid.2020.104209 Musées Royaux des Beaux-Arts de Belgique 50.842 4.358 Belgium Marat Homo sapiens 200 10.1016/j.meegid.2020.104209 eukaryota Malassezia restricta blood chromosome ENA raw PRJEB32319 ERS4278128,ERS4278129,ERS4278130 +DeDios2020 2020 10.1016/j.meegid.2020.104209 Musées Royaux des Beaux-Arts de Belgique 50.842 4.358 Belgium Marat Homo sapiens 200 10.1016/j.meegid.2020.104209 bacteria Cutibacterium acnes blood chromosome ENA raw PRJEB32319 ERS4278128,ERS4278129,ERS4278130 +Zhou2018 2018 10.1016/j.cub.2018.05.058 St. Olav's Cathedral 63.425 10.392 Norway SK152 Homo sapiens 800 10.1016/j.cub.2018.05.058 bacteria Salmonella enterica tooth chromosome UCPH ERDA raw E56xgi8CEl dentine_lib1,dentine_lib2,femur_lib1,new_lib1,new_lib2,pulp_lib1,whole_root_lib1,whole_root_lib2 +Sabin2020 2020 10.1186/s13059-020-02112-1 Lund Cathedral 55.704 13.193 Sweden Bishop Peder Winstrup Homo sapiens 300 10.1186/s13059-020-02112-1 bacteria Mycobacterium tuberculosis calcified nodule chromosome SRA raw PRJNA517266 SRS6462469 +Kay2014 2014 10.1128/mBio.01337-14 Geridu, Sardinia 40.78 8.574 Italy 2568 Homo sapiens 600 10.1128/mBio.01337-14 bacteria Brucella melitensis calcified nodule chromosome ENA raw PRJEB6045 ERS430636 +Devault2014 2014 10.1056/NEJMoa1308663 Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA 3090.13 Homo sapiens 100 10.1056/NEJMoa1308663 bacteria Vibrio cholerae intestine chromosome SRA raw PRJNA219007 SRS480102 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_121 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis bone chromosome ENA raw PRJEB7454 ERS563413,ERS563414,ERS563415 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_68 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis lung tissue chromosome ENA raw PRJEB7454 ERS563404,ERS563405,ERS563406 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_78 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis bone chromosome ENA raw PRJEB7454 ERS563407 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_28 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563385,ERS563386,ERS563387 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_25 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563382,ERS563383 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_80 Homo sapiens 100 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis thoracic segment of trunk chromosome ENA raw PRJEB7454 ERS563408 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_23 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis abdomen chromosome ENA raw PRJEB7454 ERS563378,ERS563379 +Kay2015 2015 10.1038/ncomms7717 Dominican church of Vác 47.777 19.127 Hungary body_92 Homo sapiens 200 10.1038/ncomms7717 bacteria Mycobacterium tuberculosis thoracic segment of trunk chromosome ENA raw PRJEB7454 ERS563409 +vanDorp2020 2020 10.1093/molbev/msz264 Sant Jaume d’Enveja 40.705 0.727 Spain Ebro-1944 Homo sapiens 100 10.1093/molbev/msz264 eukaryota Plasmodium vivax blood chromosome ENA raw PRJEB30878 ERS3037135,ERS3037137,ERS3037139,ERS3037136,ERS3037140,ERS3037138,ERS3037141 +Kerudin2019 2019 10.1016/j.jas.2019.105035 Hospital of St James and St Mary Magdalene 50.842 -0.759 United Kingdom C21 Homo sapiens 400 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908875 +Kerudin2019 2019 10.1016/j.jas.2019.105035 Hospital of St James and St Mary Magdalene 50.842 -0.759 United Kingdom C48 Homo sapiens 400 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908876 +Kerudin2019 2019 10.1016/j.jas.2019.105035 Raunds Furnells cemetary 52.349 -0.534 United Kingdom R5046 Homo sapiens 800 10.1016/j.jas.2019.105035 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB35037 ERS3908877 +Worobey2016 2016 10.1038/nature19827 San Francisco Cohort 37.77 -122.42 USA SF20 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704794 +Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC7 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704791 +Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC16 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704790 +Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC12 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704789 +Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA NYC4 Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704792 +Worobey2016 2016 10.1038/nature19827 New York Cohort 40.69 -73.98 USA Patient0 (PZconservative040513) Homo sapiens 100 10.1038/nature19827 virus Human immunodeficiency virus 1 blood chromosome GenBank consensus Unknown KJ704787,KJ704788,KJ704797 +DeDios2019 2019 10.1099/mgen.0.000289 Sant Jaume d’Enveja 40.705 0.727 Spain Ebro-1944 Homo sapiens 100 10.1099/mgen.0.000289 eukaryota Plasmodium falciparum blood chromosome ENA raw PRJEB32165 ERS3369379,ERS3369380,ERS3369382,ERS3369383 +Schuenemann2011 2011 10.1073/pnas.1105107108 East Smithfield Cemetery 51.508 -0.069 United Kingdom ES 1-5 Homo sapiens 600 10.1073/pnas.1105107108 bacteria Yersinia pestis tooth organelle GenBank consensus Unknown HE576987 +Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK01 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw,consensus PRJNA561155 SRS5298897 +Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK02 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298896 +Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK05 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298895 +Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK08 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus bodily fluid material chromosome SRA raw PRJNA561155 SRS5298894 +Duggan2020 2020 10.1186/s13059-020-02079-z Mütter Museum, College of Physicians of Philadelphia 39.953 -75.176 USA VK12 Homo sapiens 100 10.1186/s13059-020-02079-z virus Vaccinia virus medical instrument chromosome SRA raw PRJNA561155 SRS5298893 +Namouchi2018 2018 10.1073/pnas.1812865115 Abbadia San Salvatore 42.88 11.676 Italy BSS31 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865269 +Namouchi2018 2018 10.1073/pnas.1812865115 Saint-Laurent-de-la-Cabrerisse 43.087 2.72 France SLC1006 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865271 +Namouchi2018 2018 10.1073/pnas.1812865115 St Nicolay and St Clement 59.904 10.765 Norway OSL1 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865270 +Namouchi2018 2018 10.1073/pnas.1812865115 Bergen op Zoom 51.494 4.287 Netherlands Ber45 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865268 +Namouchi2018 2018 10.1073/pnas.1812865115 Bergen op Zoom 51.494 4.287 Netherlands Ber37 Homo sapiens 600 10.1073/pnas.1812865115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB24499 ERS2865267 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Sants Màrtirs Just i Pastor 41.382 2.178 Spain Barcelona_3031 Homo sapiens 600 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124787 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 Ust-Jerusalem necropolis 54.967 49.034 Russia Bolgar_2370 Homo sapiens 600 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124788 +Spyrou2016 2016 10.1016/j.chom.2016.05.012 “Marktplatz” Ellwangen 48.962 10.131 Germany Ellwangen 549_O Homo sapiens 400 10.1016/j.chom.2016.05.012 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB13664 ERS1124790,ERS1124789 +Martin2013 2013 10.1038/ncomms3172 Audernade 50.86 3.63 Belgium Pi1845A Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258003 +Martin2013 2013 10.1038/ncomms3172 Unknown 51.52 -0.13 United Kingdom Pi1845B Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258004 +Martin2013 2013 10.1038/ncomms3172 Skårop 55.09 10.69 Denmark Pi1876 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258005 +Martin2013 2013 10.1038/ncomms3172 Stockholm 59.33 18.07 Sweden Pi1882 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258006 +Martin2013 2013 10.1038/ncomms3172 Unknown 50.11 8.65 Germany Pi1889 Solanum tuberosum 100 10.1038/ncomms3172 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB4015 ERS258007 +Spyrou2019 2019 10.1038/s41467-019-12154-0 “Marktplatz” Ellwangen 48.962 10.131 Germany Ellwangen 549_O Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607398 +Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED030.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607393 +Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED028.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607392 +Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED034.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607394 +Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED024.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607391 +Spyrou2019 2019 10.1038/s41467-019-12154-0 New Churchyard (Bedlam) burial ground 51.517 -0.083 United Kingdom BED038.A0102 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607395 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Domlinden 12 52.414 12.567 Germany BRA001.A0101 Homo sapiens 300 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607396 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Domlinden 12 52.414 12.567 Germany BRA003.A0101 Homo sapiens 300 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607397 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Laishevo III cemetery 55.401 49.549 Russia LAI009.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607399 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Laishevo III cemetery 55.401 49.549 Russia LAI010.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607400 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Kirchhof St. Johannis 48.05 10.868 Germany LBG002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607401 +Spyrou2019 2019 10.1038/s41467-019-12154-0 St. Leonhardi 48.717 11.495 Germany MAN008.B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607402 +Spyrou2019 2019 10.1038/s41467-019-12154-0 St. Leonhardi 48.717 11.495 Germany MAN015.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607403 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB005.A/B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607406 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB003.B0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607404 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Sankt Johans Freidhof 49.451 12.177 Germany NAB004.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607405 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Augustinian Friary 52.202 0.12 United Kingdom NMS002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607408 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Augustinian Friary 52.202 0.12 United Kingdom NMS003.A0101 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607409 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Possenhofener Str. 3 47.995 11.339 Germany STA001.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607410 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN014.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607419 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN020.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607422 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN021.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607423 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN019.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607421 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN007.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607414 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN002.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607411 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN008.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607415 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN013.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607418 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN011.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607416 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN004.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607412 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN032.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607425 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN031.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607424 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN005.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607413 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN018.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607420 +Spyrou2019 2019 10.1038/s41467-019-12154-0 Nägeligasse, St. Peter and Paul churchyard 46.956 8.365 Switzerland STN012.A0101 Homo sapiens 400 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607417 +Spyrou2019 2019 10.1038/s41467-019-12154-0 16 rue des Trente Six Ponts 43.592 1.446 France TRP002.A0101/02 Homo sapiens 600 10.1038/s41467-019-12154-0 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB29990 ERS3607426 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G34 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574242 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G154 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574227 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G404 / Jorgen_404 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574247 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G427 / Jorgen_427 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574249 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G507 / Jorgen_507 Homo sapiens 800 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574253 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G533 / Jorgen_533 Homo sapiens 800 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574254 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G722 / Jorgen_722 Homo sapiens 600 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574259 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G749 / Jorgen_749 Homo sapiens 700 10.1371/journal.ppat.1006997 bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574262 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G1083 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574217 +KrauseKyora2018b 2018 10.1038/s41467-018-03857-x St. Jørgen cemetery, Odense 55.399 10.406 Denmark G1149 Homo sapiens 500 10.1038/s41467-018-03857-x bacteria Mycobacterium leprae tooth chromosome ENA raw PRJEB19769 ERS1574219 +Majander2020 2020 10.1016/j.cub.2020.07.058 Holy Ghost Chapel, Turku 60.45 22.27 Finland CHS119 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum tooth chromosome ENA raw PRJEB35855 ERS4982024,ERS4982025,ERS4982023,ERS4982027,ERS4982028,ERS4982026,ERS4982029,ERS4982032,ERS4982033,ERS4982034,ERS4982035,ERS4982036,ERS4982037,ERS4982038,ERS4982039,ERS4982040,ERS4982041,ERS4982042,ERS4982043,ERS4982044,ERS4982045,ERS4982046,ERS4982047,ERS4982048,ERS4982049,ERS4982050,ERS4982052,ERS4982051,ERS4982030,ERS4982031 +Majander2020 2020 10.1016/j.cub.2020.07.058 Porvoo Dome cemetery, Porvoo 60.397 25.658 Finland PD28 Homo sapiens 200 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982084,ERS4982081,ERS4982082,ERS4982083 +Majander2020 2020 10.1016/j.cub.2020.07.058 St. Jacob’s cemetery, Tartu 58.38 26.71 Estonia SJ219 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982086,ERS4982087,ERS4982085,ERS4982089,ERS4982090,ERS4982088,ERS4982091,ERS4982092,ERS4982093,ERS4982094,ERS4982095,ERS4982096,ERS4982097,ERS4982098,ERS4982099,ERS4982100,ERS4982101,ERS4982102,ERS4982103,ERS4982104,ERS4982105,ERS4982106,ERS4982107,ERS4982108,ERS4982109,ERS4982110,ERS4982113,ERS4982112,ERS4982111 +Majander2020 2020 10.1016/j.cub.2020.07.058 Gertrude’s Infirmary, Kampen 52.55 5.91 Netherlands KM14-7 Homo sapiens 400 10.1016/j.cub.2020.07.058 bacteria Treponema pallidum bone chromosome ENA raw PRJEB35855 ERS4982054,ERS4982053,ERS4982055,ERS4982056,ERS4982057,ERS4982058,ERS4982059,ERS4982060,ERS4982061,ERS4982062,ERS4982063,ERS4982064,ERS4982065,ERS4982066,ERS4982067,ERS4982068,ERS4982069,ERS4982070,ERS4982071,ERS4982072,ERS4982073,ERS4982074,ERS4982075,ERS4982076,ERS4982077,ERS4982078,ERS4982079,ERS4982080 +Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177500 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241528 +Yoshida2013 2013 10.7554/eLife.00731.002 Ireland (in Kew Royal Botanical Gardens herbarium) 53.0 -8.0 Ireland KM177513 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241529 +Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177497 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS788351 +Yoshida2013 2013 10.7554/eLife.00731.002 Ireland (in Kew Royal Botanical Gardens herbarium) 53.0 -8.0 Ireland KM177514 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241530 +Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177548 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241531 +Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182898 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241532 +Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177509 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241533 +Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182900 Solanum lycopersicum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241534 +Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Kew Royal Botanical Gardens herbarium) 51.0 10.0 Germany M-0182907 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241535 +Yoshida2013 2013 10.7554/eLife.00731.002 Wales (in Kew Royal Botanical Gardens herbarium) 52.3 -3.5 United Kingdom KM177517 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241536 +Yoshida2013 2013 10.7554/eLife.00731.002 USA (in Botanische Staatssammlung München herbarium) 40.0 -101.0 USA M-0182897 Solanum lycopersicum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241537 +Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182906 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241538 +Yoshida2013 2013 10.7554/eLife.00731.002 Germany (in Botanische Staatssammlung München herbarium) 51.0 10.0 Germany M-0182896 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241539 +Yoshida2013 2013 10.7554/eLife.00731.002 Austria (in Botanische Staatssammlung München herbarium) 47.5 14.0 Austria M-0182904 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241540 +Yoshida2013 2013 10.7554/eLife.00731.002 Canada (in Botanische Staatssammlung München herbarium) 58.0 -109.0 Canada M-0182903 Solanum tuberosum 100 10.7554/eLife.00731.002 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241541 +Yoshida2013 2013 10.7554/eLife.00731.002 England (in Kew Royal Botanical Gardens herbarium) 53.0 -1.0 United Kingdom KM177512 Solanum tuberosum 100 10.7554/eLife.00731.003 eukaryota Phytophthora infestans leaf chromosome ENA raw PRJEB1877 ERS241542 +Muhlemann2020 2020 10.1126/science.aaw8977 Nabberör, Böda 57.244 17.059 Sweden VK382 Homo sapiens 1300 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540432 +Muhlemann2020 2020 10.1126/science.aaw8977 Lødingen,, Nordland 68.411 15.988 Norway VK388 Homo sapiens 1300 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540433 +Muhlemann2020 2020 10.1126/science.aaw8977 Gnezdovo 54.784 31.865 Russia VK470 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540435 +Muhlemann2020 2020 10.1126/science.aaw8977 Bårse ‘Tyvestensagern’ 55.125 11.951 Denmark VK281 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540431 +Muhlemann2020 2020 10.1126/science.aaw8977 St. John’s College, Oxford 51.756 -1.259 United Kingdom VK168 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus bone chromosome SRA reference_aligned PRJEB38129 ERS4540429 +Muhlemann2020 2020 10.1126/science.aaw8977 Sörby-Störlinge 56.81 16.735 Sweden VK533 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540437 +Muhlemann2020 2020 10.1126/science.aaw8977 Bodø 67.279 14.404 Norway VK515 Homo sapiens 1200 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540436 +Muhlemann2020 2020 10.1126/science.aaw8977 Gnezdovo 54.784 31.865 Russia VK255 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540430 +Muhlemann2020 2020 10.1126/science.aaw8977 Varzino 68.37 38.38 Russia FIN1 Homo sapiens 100 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540426 +Muhlemann2020 2020 10.1126/science.aaw8977 Khalas-Pugor, Salekhard 66.546 66.605 Russia KHA1 Homo sapiens 100 10.1126/science.aaw8977 virus Variola virus bone chromosome SRA reference_aligned PRJEB38129 ERS4540425 +Muhlemann2020 2020 10.1126/science.aaw8977 Forgalla skepp, Böda 57.244 17.059 Sweden VK443 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540434 +Muhlemann2020 2020 10.1126/science.aaw8977 Ljungbacka, Lockarp 55.532 13.032 Sweden VK108 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540427 +Muhlemann2020 2020 10.1126/science.aaw8977 Galgedil, Funen 55.524 10.386 Denmark VK138 Homo sapiens 1000 10.1126/science.aaw8977 virus Variola virus tooth chromosome SRA reference_aligned PRJEB38129 ERS4540428 +Mendum2014 2014 10.1186/1471-2164-15-270 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom Sk14 Homo sapiens 1000 10.1186/1471-2164-15-270 bacteria Mycobacterium leprae bone chromosome ENA raw PRJNA200950 SRS418847 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir el-Meleq 29.24 31.1 Egypt Abusir1630 Homo sapiens 2200 10.1038/ncomms15694 bacteria Mycobacterium leprae bone chromosome ENA raw PRJEB33848 ERS3635976,ERS3636087,ERS3636088,ERS3636089 +Neukamm2020 2020 10.1186/s12915-020-00839-8 Abusir el-Meleq 29.24 31.1 Egypt Abusir1543 Homo sapiens 1900 10.1371/journal.pone.0060307 virus Hepatitis B virus tissue chromosome ENA raw PRJEB33848 ERS3636018,ERS3636097,ERS3636099,ERS3636100,ERS3636098,ERS3636101,ERS3636093,ERS3636094,ERS3636095,ERS3636096,ERS3636025 +Eerkens2018 2018 10.1016/j.ijpp.2018.05.001 CA-SCL-919, Santa Clara County 37.3 -121.8 USA 16 Homo sapiens 400 10.1016/j.ijpp.2018.05.001 bacteria Neisseria meningitidis dental calculus chromosome SRA raw PRJNA377320 SRS2006287 +Susat2020 2020 10.1038/s41598-020-71530-9 Mass grave 1, St. Gertrude's Cemetery, Riga 56.954 24.119 Latvia G488 Homo sapiens 400 10.1038/s41598-020-71530-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB36413 ERS4266556 +Susat2020 2020 10.1038/s41598-020-71530-9 Burial pit, St. Gertrude's Cemetery, Riga 56.954 24.119 Latvia G701 Homo sapiens 400 10.1038/s41598-020-71530-9 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB36413 ERS4266549 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18023_Japan_Edo_4 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212663 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18021_Japan_Edo_2 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212661 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18020_Japan_Edo_1 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212660 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Miyano 39.12 141.81 Japan A18018_Japan_Jomon_4 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212658 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Ikawazu 34.64 137.14 Japan A18016_Japan_Jomon_2 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212656 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18033_Japan_Edo_10 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212655 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18032_Japan_Edo_9 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212654 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18027_Japan_Edo_8 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212652 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18026_Japan_Edo_7 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212651 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.71 139.78 Japan A18025_Japan_Edo_6 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212650 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Tokyo 35.713 139.767 Japan A18024_Japan_Edo_5 Homo sapiens 200 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212649 +Eisenhofer2020 2020 10.1098/rstb.2019.0578 Miyano 39.12 141.81 Japan A18015_Japan_Jomon_1 Homo sapiens 2700 10.1098/rstb.2019.0578 bacteria Anaerolineaceae bacterium oral taxon 439 dental calculus chromosome SRA raw PRJNA608555 SRS6212648 +Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov1639 Homo sapiens 200 10.1098/rstb.2019.0569 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071778,ERS5071779,ERS5071780,ERS5071772 +Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov2033 Homo sapiens 200 10.1098/rstb.2019.0570 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071781,ERS5071782,ERS5071783,ERS5071773 +Morozova2020 2020 10.1098/rstb.2019.0569 St. Dmitry Rostovsky fortress, Rostov-on-Don 47.23 39.68 Russia Rostov2039 Homo sapiens 200 10.1098/rstb.2019.0571 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071784,ERS5071785,ERS5071786,ERS5071787,ERS5071774 +Morozova2020 2020 10.1098/rstb.2019.0569 Azov city, Rostov-on-Don 47.1 39.41 Russia Azov38 Homo sapiens 500 10.1098/rstb.2019.0572 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071788,ERS5071789,ERS5071790,ERS5071775 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdańsk ossuaries, Dominican Square 54.352 16.652 Poland Gdansk8 Homo sapiens 500 10.1098/rstb.2019.0573 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB35426 ERS5071791,ERS5071792,ERS5071793,ERS5071794,ERS5071776 +Morozova2020 2020 10.1098/rstb.2019.0569 Gdańsk ossuaries, Dominican Square 54.352 16.652 Poland Rat Rattus rattus 500 10.1098/rstb.2019.0574 bacteria Yersinia pestis bone chromosome ENA raw PRJEB35426 ERS5071795,ERS5071796,ERS5071797,ERS5071770,ERS5071771,ERS5071777 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 94A Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470993 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 94B Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470994 +Schuenemann2018b 2018 10.1371/journal.pntd.0006447 Convent of Santa Isabel, Mexico City 19.435 -99.141 Mexico 133 Homo sapiens 300 10.1371/journal.pntd.0006447 bacteria Treponema pallidum bone chromosome ENA raw PRJEB21276 ERS2470995 +Ferrari2020 2020 10.1098/rstb.2019.0572 Hunterian Museum, Royal College of Surgeons, London 51.516 -0.116 United Kingdom RCSHC/P 328 Homo sapiens 200 10.1098/rstb.2019.0572 virus Variola virus tissue chromosome ENA raw PRJEB35140 ERS3935826,ERS3935827,ERS3935828,ERS3935829,ERS3935830,ERS3935831 +Williams2020 2020 10.1128/mra.00850-20 Kodiak Island Collection, National Museum of Natural History (Washington D.C.) 38.891 -77.026 USA 364459 Homo sapiens 100 10.1128/mra.00850-20 bacteria Stenotrophomonas maltophilia dental calculus chromosome SRA raw,binned_mag,consensus PRJNA643812 SRS6939171 +Williams2020 2020 10.1128/mra.00850-20 Medical Collection, American Museum of Natural History (New York) 40.781 -73.974 USA AMNH98137_Q01 Homo sapiens 100 10.1128/mra.00850-20 bacteria Acinetobacter baumannii dental calculus chromosome SRA raw,binned_mag,consensus PRJNA643812 SRS6939170 +Fotakis2020 2020 10.1098/rstb.2019.0584 Library site, Trondheim 63.431 10.401 Norway SK92 Homo sapiens 400 10.1098/rstb.2019.0584 bacteria Mycobacterium leprae dental calculus chromosome ENA raw PRJEB37995 ERS5113011 +Marciniak2016 2016 10.1016/j.cub.2016.10.016 Velia 40.158 15.159 Italy LV13 Homo sapiens 1800 10.1016/j.cub.2016.10.016 eukaryota Plasmodium falciparum tooth organelle SRA raw PRJNA348634 SRS1747845 +Marciniak2016 2016 10.1016/j.cub.2016.10.016 Vagnari 40.85 16.28 Italy LG20 Homo sapiens 1700 10.1016/j.cub.2016.10.016 eukaryota Plasmodium falciparum tooth organelle SRA raw PRJNA348634 SRS1747846 +Gelabert2016 2016 10.1073/pnas.1611017113 Sant Jaume d’Enveja, Ebro Delta 40.706 0.721 Spain CA, CM, POS Homo sapiens 100 10.1073/pnas.1611017113 eukaryota Plasmodium falciparum blood organelle SRA reference_aligned PRJNA338278 SRS1609867 +Gelabert2016 2016 10.1073/pnas.1611017113 Sant Jaume d’Enveja, Ebro Delta 40.706 0.721 Spain CA, CM, POS Homo sapiens 100 10.1073/pnas.1611017113 eukaryota Plasmodium vivax blood organelle SRA reference_aligned PRJNA338278 SRS1607662 +Taubenberger2005 2005 10.1038/nature04230 Armed Forces Institute of Pathology, Washington DC 38.975 -77.031 USA A/Brevig Mission/1/1918(H1N1) Homo sapiens 100 10.1073/pnas.96.4.1651 virus Influenza A virus lung tissue chromosome GenBank consensus Unknown DQ208309.1,DQ208310.1,DQ208311.1,AF116575.1,AY744935.1,AF250356.2,AY130766.1,AF333238.1 +Lugli2017 2017 10.1186/s40168-016-0221-y Hauslabjoch 46.773 10.837 Italy Iceman Intestine (B0621,C1824,C1825,B0625) Homo sapiens 5300 10.1126/science.aad2545 bacteria Clostridium perfringens digestive tract contents chromosome ENA raw PRJEB11511 ERS942272,ERS942281,ERS942282,ERS942276 +Lugli2017 2017 10.1186/s40168-016-0221-y Hauslabjoch 46.773 10.837 Italy Iceman Intestine (B0621,C1824,C1825,B0625) Homo sapiens 5300 10.1126/science.aad2545 bacteria Pseudomonas veronii digestive tract contents chromosome ENA raw PRJEB11511 ERS942272,ERS942281,ERS942282,ERS942276 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Cañada de La virgen 20.858 -100.928 Mexico CA_13 Homo sapiens 2500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288481 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Tabuco 20.959 -97.339 Mexico VE_42 Homo sapiens 3000 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288482 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_2417Q Homo sapiens 700 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288476 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_2417J Homo sapiens 2800 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7326368 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Toluquilla 20.883 -99.53 Mexico TO_333O Homo sapiens 2600 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288477 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Tepeticpac 19.348 -98.235 Mexico TLA_01 Homo sapiens 500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288484 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Tepeticpac 19.348 -98.235 Mexico TLA_22 Homo sapiens 500 10.1098/rstb.2019.0580 bacteria Tannerella forsythia dental calculus chromosome SRA reference_aligned PRJNA660267 SRS7288483 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN_194 Homo sapiens 400 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288487 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN_240 Homo sapiens 400 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288488 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Temple of Immaculate Conception 19.347 -99.158 Mexico CO_09 Homo sapiens 200 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288485 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Temple of Immaculate Conception 19.347 -99.158 Mexico CO_20 Homo sapiens 200 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288486 +BravoLopez2020 2020 10.1098/rstb.2019.0580 Ex College of San Ignacio of Loyola 20.592 -100.409 Mexico UAQG Homo sapiens 300 10.1098/rstb.2019.0580 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA660267 SRS7288478 +Philips2020 2020 10.1186/s12864-020-06810-9 Masłomęcz 50.722 23.892 Poland PCA0088 Homo sapiens 1700 10.1186/s12864-020-06810-9 bacteria Tannerella forsythia tooth chromosome SRA reference_aligned PRJNA354503 SRS1815293 +Kilinc2021 2021 10.1126/sciadv.abc4587 Anosovo (Angara river, Irkutsk Oblast, Cis-Baikal) 54.665 103.232 Russia Anosovo-1 (irk050) Homo sapiens 4000 10.1126/sciadv.abc4587 bacteria Yersinia pestis tooth chromosome ENA reference_aligned PRJEB39378 ERS4827048 +Kilinc2021 2021 10.1126/sciadv.abc4587 Kamenka (Kolyma river, Yakutia, Far Eastern Federal District) 66.8 152.633333 Russia Kamenka-2 (yak023) Homo sapiens 3500 10.1126/sciadv.abc4587 bacteria Yersinia pestis tooth chromosome ENA reference_aligned PRJEB39378 ERS4827062 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1429 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335226 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1510 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335227 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1558 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335228 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1579 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335229 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1599 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335230 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1600 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335231 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1607 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335232 +Haller2021 2021 10.1016/j.isci.2021.102419 Heiligen-Geist-Hospital, Lübeck 53.871 10.69 Germany HGH-1638 Homo sapiens 600 10.1016/j.isci.2021.102419 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB41353 ERS5335233 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR11 Homo sapiens 300 10.1016/j.isci.2021.102383 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB43291 ERS5823072 +SeguinOrlando2021 2021 10.1016/j.isci.2021.102383 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR8 Homo sapiens 300 10.1016/j.isci.2021.102383 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB43291 ERS5823096 +Guellil2020 2020 10.1073/pnas.2009677117 Maist, Chechnya 42.691 45.332 Russia CHE1 Homo sapiens 200 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051705 +Guellil2020 2020 10.1073/pnas.2009677117 San Giovani in Fistola, Collalto Sabino 42.13 13.04 Italy COL001 Homo sapiens 600 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051706 +Guellil2020 2020 10.1073/pnas.2009677117 Pestbacken, Holje 56.283 14.516 Sweden PEB10 Homo sapiens 200 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051704 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN1 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051707 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN7 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051708 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN8 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051709 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN13 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051710 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN14 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051711 +Guellil2020 2020 10.1073/pnas.2009677117 San Procolo a Naturno, Naturns 46.652 11.009 Italy SPN19 Homo sapiens 300 10.1073/pnas.2009677117 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27821 ERS5051712 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Lushoto District -4.8 38.29 Tanzania Herb4 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008173 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown 0.22 6.58 Sao Tome and Principe Herb5 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008179 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Kitobola -5.36 14.51 Democratic Republic of the Congo Herb9 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008183 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Yangambi 0.8 24.45 Democratic Republic of the Congo MK003 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008154 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK011 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008163 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -6.36 34.89 Tanzania MK012 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008164 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Mikumi National Park -7.4 37.4 Tanzania MK014 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008166 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Tukpwo 4.4 25.8 Democratic Republic of the Congo MK015 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008167 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK016 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008168 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Kidatu -7.7 36.96 Tanzania MK017 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008169 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Kidatu -7.7 36.96 Tanzania MK019 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008171 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Unknown -4.03 21.75 Democratic Republic of the Congo MK020 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008172 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Mahenge -8.68 36.71 Tanzania MK023 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008175 +Danneels2021 2021 10.1016/j.cub.2021.03.049 Madanga -5.35 38.98 Tanzania MK025 Dioscorea sansibarensis 100 10.1016/j.cub.2021.03.049 bacteria Orrella dioscoreae leaf chromosome SRA raw PRJNA646369 SRS7008177 +Susat2021 2021 10.1016/j.celrep.2021.109278 Riņņukalns 57.793 25.153 Latvia RV2039 Homo sapiens 5200 10.1007/s12520-020-01049-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB42185 ERS6638365 +DeDios2021 2021 10.1016/j.isci.2021.103021 La Sagrera (Sant Martí de Provençals), Barcelona 41.42 2.19 Spain F1691-1810 Homo sapiens 400 10.1016/j.isci.2021.103021 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB43276 ERS6464927 +Campos2021 2021 10.1371/journal.ppat.1009714 Phoenix -20.285 57.512 Mauritius HERB_1937 Citrus sp. 100 10.1371/journal.ppat.1009714 bacteria Xanthomonas citri leaf chromosome SRA raw PRJNA668001 SRS7491184 +GuzmanSolis2021 2021 10.7554/eLife.68612 Temple of Immaculate Conception 19.347 -99.158 Mexico COYC4 Homo sapiens 300 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864574 +GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN194 Homo sapiens 400 10.7554/eLife.68612 virus Hepatitis B virus tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864575 +GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJN240 Homo sapiens 400 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864576 +GuzmanSolis2021 2021 10.7554/eLife.68612 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico HSJNC81 Homo sapiens 300 10.7554/eLife.68612 virus Parvovirus B19 tooth chromosome Dryad reference_aligned 10.5061/dryad.5x69p8d2s 864577 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM20 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000645,SRS9000646 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM90 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000648,SRS9000650 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM7 Homo sapiens 3100 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000651,SRS9000652 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM83 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000653,SRS9000656 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM11 Homo sapiens 3100 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000654,SRS9000655 +Wu2021 2021 10.1371/journal.ppat.1009886 Quanergou cemetery, Xinjiang 43.523 93.288 China XBQM64 Homo sapiens 3000 10.1371/journal.ppat.1009886 bacteria Salmonella enterica tooth chromosome SRA raw PRJNA730407 SRS9000647,SRS9000649 +Kocher2021 2021 10.1126/science.abi5658 Alto de Rodilla 42.419 -3.485 Spain ADR001 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597748 +Kocher2021 2021 10.1126/science.abi5658 Akbeit 48.937 74.759 Kazakhstan AKB003 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597749 +Kocher2021 2021 10.1126/science.abi5658 Alalakh 36.238 36.385 Turkey ALA098 Homo sapiens 3700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597750 +Kocher2021 2021 10.1126/science.abi5658 Alalakh 36.238 36.385 Turkey ALA110 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597751 +Kocher2021 2021 10.1126/science.abi5658 Kaps 40.867 43.717 Armenia ARM001 Homo sapiens 5500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597752 +Kocher2021 2021 10.1126/science.abi5658 Kaps 40.867 43.717 Armenia ARM0023 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597753 +Kocher2021 2021 10.1126/science.abi5658 Arslantepe 38.382 38.361 Turkey ART005 Homo sapiens 5700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597754 +Kocher2021 2021 10.1126/science.abi5658 Arslantepe 38.382 38.361 Turkey ART024 Homo sapiens 5400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597755 +Kocher2021 2021 10.1126/science.abi5658 Brandýs nad Labem 50.187 14.664 Czechia BNL005 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597756 +Kocher2021 2021 10.1126/science.abi5658 Boncuklu Hoyuk 37.752 32.865 Turkey BON020 Homo sapiens 10100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597757 +Kocher2021 2021 10.1126/science.abi5658 Bolshoy Oleni Ostrov 69.224 33.485 Russia BOO006 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597758 +Kocher2021 2021 10.1126/science.abi5658 Bolshoy Oleni Ostrov 69.224 33.485 Russia BOO008 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597759 +Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE008 Homo sapiens 1700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597760 +Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE026 Homo sapiens 2300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597761 +Kocher2021 2021 10.1126/science.abi5658 Berel 49.343 86.365 Kazakhstan BRE028 Homo sapiens 2300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597762 +Kocher2021 2021 10.1126/science.abi5658 Carolinas II 22.985 -81.462 Cuba CAA002 Homo sapiens 1600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597763 +Kocher2021 2021 10.1126/science.abi5658 Canimar abajo 23.038 -81.497 Cuba CAO009 Homo sapiens 1400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597764 +Kocher2021 2021 10.1126/science.abi5658 Cueva de Chaves 42.215 -0.139 Spain CHA003 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597765 +Kocher2021 2021 10.1126/science.abi5658 Chotìn 47.809 18.224 Slovakia CHT001 Homo sapiens 2200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597766 +Kocher2021 2021 10.1126/science.abi5658 Cueva de las Lechuzas 38.646 -0.893 Spain CLL005 Homo sapiens 4900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597767 +Kocher2021 2021 10.1126/science.abi5658 Cuncaicha -15.33 -72.59 Peru CUN002 Homo sapiens 9100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597768 +Kocher2021 2021 10.1126/science.abi5658 Derenburg 51.87 10.91 Germany DER027 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597769 +Kocher2021 2021 10.1126/science.abi5658 Doggerland 53.0 2.54 Netherlands DOG007 Homo sapiens 9400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597770 +Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain ELT005 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597771 +Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain ELT006 Homo sapiens 5800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597772 +Kocher2021 2021 10.1126/science.abi5658 Gougenheim 48.7 7.57 France GGN005 Homo sapiens 5700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597773 +Kocher2021 2021 10.1126/science.abi5658 Gurgy Les Noisats 47.864 3.56 France GRG001 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597774 +Kocher2021 2021 10.1126/science.abi5658 Gurgy Les Noisats 47.864 3.56 France GRG036 Homo sapiens 6800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597775 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany HAL05 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597776 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany HAL15 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597777 +Kocher2021 2021 10.1126/science.abi5658 Hostivice-Palouky 50.08 14.281 Czechia HOP004 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597778 +Kocher2021 2021 10.1126/science.abi5658 Ölsund, Hälsingland 61.632 16.36 Sweden HSL001 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597779 +Kocher2021 2021 10.1126/science.abi5658 Vegachayoq Moqo, Huari -13.06 -74.2 Peru HUA056 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597780 +Kocher2021 2021 10.1126/science.abi5658 Vegachayoq Moqo, Huari -13.06 -74.2 Peru HUA063 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597781 +Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.65 35.65 Russia I0061 Homo sapiens 8300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597782 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I0100 Homo sapiens 7000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597783 +Kocher2021 2021 10.1126/science.abi5658 Esperstedt 51.42 11.68 Germany I0104 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597784 +Kocher2021 2021 10.1126/science.abi5658 Rothenschirmbach 51.45 11.54 Germany I0111 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597785 +Kocher2021 2021 10.1126/science.abi5658 Hinxton 52.08 0.18 United Kingdom I0157 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597786 +Kocher2021 2021 10.1126/science.abi5658 Hinxton 52.08 0.18 United Kingdom I0161 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597787 +Kocher2021 2021 10.1126/science.abi5658 Oberwiederstedt-Schrammhoehe 51.666 11.532 Germany I0162 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597788 +Kocher2021 2021 10.1126/science.abi5658 Oberwiederstedt-Schrammhoehe 51.666 11.532 Germany I0163 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597789 +Kocher2021 2021 10.1126/science.abi5658 Latsch, Vinschgau 46.64 10.859 Italy I0216 Homo sapiens 2700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597790 +Kocher2021 2021 10.1126/science.abi5658 Latsch, Vinschgau 46.64 10.859 Italy I0217 Homo sapiens 2700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597791 +Kocher2021 2021 10.1126/science.abi5658 Els Trocs 42.496 0.507 Spain I0411 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597792 +Kocher2021 2021 10.1126/science.abi5658 Arroyal I 42.4 -3.75 Spain I0461 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597793 +Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0551 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597794 +Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0554 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597795 +Kocher2021 2021 10.1126/science.abi5658 Yunatsite 42.232 24.263 Bulgaria I0784 Homo sapiens 6300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597796 +Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0795 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597797 +Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0796 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597798 +Kocher2021 2021 10.1126/science.abi5658 Karsdorf 51.283 11.65 Germany I0797 Homo sapiens 7100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597799 +Kocher2021 2021 10.1126/science.abi5658 Salzmuende 51.533 11.833 Germany I0798 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597800 +Kocher2021 2021 10.1126/science.abi5658 Semikarakorsk, Donskoy 47.236 39.702 Russia I0960 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597801 +Kocher2021 2021 10.1126/science.abi5658 Huaca Pucllana -12.115 -77.034 Peru I0972 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597802 +Kocher2021 2021 10.1126/science.abi5658 Samtavro 41.851 44.719 Georgia I1321 Homo sapiens 1900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597803 +Kocher2021 2021 10.1126/science.abi5658 Verchnyaya Koban, North Ossetia 42.9 44.46 Russia I1344 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597804 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2005 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597805 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2006 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597806 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2017 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597807 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2020 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597808 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2027 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597809 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2031 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597810 +Kocher2021 2021 10.1126/science.abi5658 Halberstadt 51.896 11.047 Germany I2032 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597811 +Kocher2021 2021 10.1126/science.abi5658 İkiztepe 41.614 35.871 Turkey IKI009 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597812 +Kocher2021 2021 10.1126/science.abi5658 Is Bittuleris 39.868 9.236 Italy ISB002 Homo sapiens 3700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597813 +Kocher2021 2021 10.1126/science.abi5658 Jazikovo 57.121 38.152 Russia JAZ001 Homo sapiens 7300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597814 +Kocher2021 2021 10.1126/science.abi5658 Karanaevskiy 55.639 58.297 Russia KAP002 Homo sapiens 3500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597815 +Kocher2021 2021 10.1126/science.abi5658 Kabardinka 43.826 42.717 Russia KBD002 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597816 +Kocher2021 2021 10.1126/science.abi5658 Kudachurt 43.354 43.722 Russia KDC001 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597817 +Kocher2021 2021 10.1126/science.abi5658 Kamid el-Loz 33.622 35.823 Lebanon KEL045 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597818 +Kocher2021 2021 10.1126/science.abi5658 Kilteasheen 54.007 -8.202 Ireland KIL044 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597819 +Kocher2021 2021 10.1126/science.abi5658 Kleinaitingen 48.218 10.846 Germany KLE031 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597820 +Kocher2021 2021 10.1126/science.abi5658 Krakauer Berg 51.755 11.727 Germany KRA001 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597821 +Kocher2021 2021 10.1126/science.abi5658 Krakauer Berg 51.755 11.727 Germany KRA010 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597822 +Kocher2021 2021 10.1126/science.abi5658 Kuelap -6.418 -77.924 Peru KUE033 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597823 +Kocher2021 2021 10.1126/science.abi5658 Khvalynsk 52.501 48.094 Russia KVK001 Homo sapiens 10300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597824 +Kocher2021 2021 10.1126/science.abi5658 Leubingen 51.206 11.183 Germany LEU065 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597825 +Kocher2021 2021 10.1126/science.abi5658 Loschbour rock shelter 49.77 6.24 Luxembourg Loschbour Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597826 +Kocher2021 2021 10.1126/science.abi5658 Machu Picchu -13.163 -72.546 Peru MAP007 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597827 +Kocher2021 2021 10.1126/science.abi5658 Mayachnyiy bugor 47.095 47.211 Russia MAY017 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597828 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB003 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597829 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB011 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597830 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB040 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597831 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIB041 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597832 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MIS002 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597833 +Kocher2021 2021 10.1126/science.abi5658 Maryinskaya 5 43.905 43.522 Russia MK5004 Homo sapiens 5200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597834 +Kocher2021 2021 10.1126/science.abi5658 Maryinskaya 5 43.905 43.522 Russia MK5009 Homo sapiens 4800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597835 +Kocher2021 2021 10.1126/science.abi5658 Mikulovice 49.992 15.777 Czechia MKL025 Homo sapiens 3800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597836 +Kocher2021 2021 10.1126/science.abi5658 Malaya Ryazan' 53.224 49.315 Russia MLR005 Homo sapiens 700 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597837 +Kocher2021 2021 10.1126/science.abi5658 Minino II 59.382 39.396 Russia MN2003 Homo sapiens 10600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597838 +Kocher2021 2021 10.1126/science.abi5658 Kanaljorden, Motala 58.548 14.972 Sweden MOT001 Homo sapiens 7800 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597839 +Kocher2021 2021 10.1126/science.abi5658 Malonne petit Ry 50.474 4.873 Belgium MPR001 Homo sapiens 10500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597840 +Kocher2021 2021 10.1126/science.abi5658 Murzihinskiy II tomb 55.735 51.65 Russia MUR007 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597841 +Kocher2021 2021 10.1126/science.abi5658 Nevinnomyskiy 3 44.735 41.939 Russia NV3001 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597842 +Kocher2021 2021 10.1126/science.abi5658 Oakington 52.26 0.061 United Kingdom OAI017 Homo sapiens 1500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597843 +Kocher2021 2021 10.1126/science.abi5658 Oberottmarshausen 48.233 10.861 Germany OOH025 Homo sapiens 3600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597844 +Kocher2021 2021 10.1126/science.abi5658 Orenburg 51.81 55.18 Russia ORE002 Homo sapiens 2600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597845 +Kocher2021 2021 10.1126/science.abi5658 Prague 8 - Ďáblice 50.148 14.485 Czechia PDA001 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597846 +Kocher2021 2021 10.1126/science.abi5658 Prague 8 - Ďáblice 50.148 14.485 Czechia PDA003 Homo sapiens 4200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597847 +Kocher2021 2021 10.1126/science.abi5658 Pendimoun 43.81 7.51 France PEN003 Homo sapiens 7400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597848 +Kocher2021 2021 10.1126/science.abi5658 Purun Llacta de Soloco -6.3 -77.701 Peru PLS004 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597849 +Kocher2021 2021 10.1126/science.abi5658 Peñón de la Zorra 38.645 -0.87 Spain PLZ001 Homo sapiens 3600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597850 +Kocher2021 2021 10.1126/science.abi5658 Quedlinburg 51.787 11.154 Germany QUE004 Homo sapiens 4300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597851 +Kocher2021 2021 10.1126/science.abi5658 Regensburg Minoritenweg 49.017 12.105 Germany RMI002 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597852 +Kocher2021 2021 10.1126/science.abi5658 Serra Crabiles (Sennori) 40.79 8.59 Italy SEC006 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597853 +Kocher2021 2021 10.1126/science.abi5658 Sedgeford 52.9 0.544 United Kingdom SED009 Homo sapiens 1200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597854 +Kocher2021 2021 10.1126/science.abi5658 Shagara 55.237 40.1 Russia SGR003 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597855 +Kocher2021 2021 10.1126/science.abi5658 Shagara 55.132 40.175 Russia SGR004 Homo sapiens 5000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597856 +Kocher2021 2021 10.1126/science.abi5658 Sheksovo II 56.528 40.179 Russia SHK001 Homo sapiens 800 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597857 +Kocher2021 2021 10.1126/science.abi5658 S'isteridolzu 40.624 8.636 Italy SID005 Homo sapiens 6100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597858 +Kocher2021 2021 10.1126/science.abi5658 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN005 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597859 +Kocher2021 2021 10.1126/science.abi5658 Hospital Real de San José de los Naturales 19.43 -99.14 Mexico SJN013 Homo sapiens 500 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597860 +Kocher2021 2021 10.1126/science.abi5658 Stuttgart-Mühlhausen I 48.84 9.228 Germany SMH004 Homo sapiens 7200 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597861 +Kocher2021 2021 10.1126/science.abi5658 St. Rombout's churchyard 51.029 4.479 Belgium STR144 Homo sapiens 400 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597862 +Kocher2021 2021 10.1126/science.abi5658 Su Asedazzu 39.417 9.236 Italy SUA002 Homo sapiens 4100 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597863 +Kocher2021 2021 10.1126/science.abi5658 Su Asedazzu 39.417 9.236 Italy SUA007 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597864 +Kocher2021 2021 10.1126/science.abi5658 Trinitapoli 41.355 16.088 Italy TRI011 Homo sapiens 3300 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597865 +Kocher2021 2021 10.1126/science.abi5658 Tutkaul 38.3 69.283 Tajikistan TTK002 Homo sapiens 8300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597866 +Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO011 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597867 +Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO024 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597868 +Kocher2021 2021 10.1126/science.abi5658 Yuzhny Oleni Ostrov 61.938 35.261 Russia UOO033 Homo sapiens 8100 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597869 +Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ061 Homo sapiens 6700 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597870 +Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ075 Homo sapiens 7300 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597871 +Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ081 Homo sapiens 8600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597872 +Kocher2021 2021 10.1126/science.abi5658 Grotta dell'Uzzo 38.11 12.787 Italy UZZ099 Homo sapiens 6000 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597873 +Kocher2021 2021 10.1126/science.abi5658 Varna 43.219 27.914 Bulgaria VAR021 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597874 +Kocher2021 2021 10.1126/science.abi5658 Vliněves 50.373 14.449 Czechia VLI016 Homo sapiens 4400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597875 +Kocher2021 2021 10.1126/science.abi5658 Vliněves 50.373 14.449 Czechia VLI060 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597876 +Kocher2021 2021 10.1126/science.abi5658 Vertaizon 45.774 3.287 France VTZ008 Homo sapiens 6400 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597877 +Kocher2021 2021 10.1126/science.abi5658 Vertaizon 45.774 3.287 France VTZ011 Homo sapiens 6600 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597878 +Kocher2021 2021 10.1126/science.abi5658 Wehringen-Hochfeld 48.247 10.801 Germany WEH008 Homo sapiens 3900 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597879 +Kocher2021 2021 10.1126/science.abi5658 Wehringen-Hochfeld 48.247 10.801 Germany WEH009 Homo sapiens 4000 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597880 +Kocher2021 2021 10.1126/science.abi5658 Wenigensömmern 51.174 11.136 Germany WSN010 Homo sapiens 420 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597881 +Kocher2021 2021 10.1126/science.abi5658 Wenigensömmern 51.174 11.136 Germany WSN012 Homo sapiens 4200 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597882 +Kocher2021 2021 10.1126/science.abi5658 Yunatsite 42.23 24.26 Bulgaria YUN048 Homo sapiens 6500 10.1126/science.abi5658 virus Hepatitis B virus bone chromosome ENA reference_aligned PRJEB45699 ERS6597883 +Kocher2021 2021 10.1126/science.abi5658 Zweisimmen Kirchgasse 46.554 7.372 Switzerland ZWE008 Homo sapiens 600 10.1126/science.abi5658 virus Hepatitis B virus tooth chromosome ENA reference_aligned PRJEB45699 ERS6597884 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Dereivka I 48.91 33.76 Ukraine I5884 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777163 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Vlineves 50.373 14.449 Czechia VLI092 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777164 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Krasnogvardeyskoe 45.825 41.582 Russia KNK001 Homo sapiens 4200 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777165 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Großstorkwitz 51.189 12.267 Germany GRS004 Homo sapiens 4100 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777166 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Hostivice-Palouky 50.08 14.281 Czechia HOP001 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777167 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Hostivice-Palouky 50.08 14.281 Czechia HOP004 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777168 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kaluzhnyy 1 44.848 42.219 Russia KLZ001 Homo sapiens 3800 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777169 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Chociwel 50.796 17.094 Poland CHC004 Homo sapiens 3600 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777170 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kleinaitingen 48.218 10.846 Germany KLE031 Homo sapiens 3500 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777171 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Mikulovice 49.992 15.777 Czechia MIB054 Homo sapiens 3600 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777172,ERS10777173,ERS10777174 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kleinaitingen 48.218 10.846 Germany KLE048 Homo sapiens 3400 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777175 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Oberottmarshausen 48.233 10.861 Germany OOH003 Homo sapiens 3300 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777176 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Dolmen “El Sotillo” 42.573 -2.621 Spain I2470 Homo sapiens 3100 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777177 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Arbulag sum, Khövsgöl 49.65 99.72 Mongolia ARS007 Homo sapiens 3000 10.1073/pnas.1813608115 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777178 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Kyzyl 48.278 75.356 Kazakhstan KZL002 Homo sapiens 2500 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777179 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Velešovice 49.178 16.848 Czechia VEL003 Homo sapiens 4000 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777180 +AndradesValtuena2022 2022 10.1073/pnas.2116722119 Grushevskoe 45.063 41.54 Russia GRH001 Homo sapiens 2700 10.1073/pnas.2116722119 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB51099 ERS10777181 +Granehall2021 2021 10.1186/s40168-021-01132-8 Isarco valley, Bressanone Elvas necropoli 17/Brixen Elvas 46.73 11.67 Italy 2102 Homo sapiens 1300 10.1016/j.quaint.2013.07.052 archaea Methanobrevibacter oralis dental calculus chromosome ENA raw PRJEB43389 ERS6205401 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Studzenka 53.585 30.029 Belarus BEL024 Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825982 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Nonneseter, Bergen 60.39 5.333 Norway Bergen Homo sapiens 700 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826036,SRS9826037,SRS9826038 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Church End, Cherry Hinton, Cambridge 52.196 0.174 United Kingdom CHRY023 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826045,SRS9825983 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Church End, Cherry Hinton, Cambridge 52.196 0.174 United Kingdom CHRY044 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826047 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Barrejo, Cordiñanes de Valdeón, León 43.167 -4.903 Spain COR_XVIII Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826000,SRS9826002 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI006 Homo sapiens 1400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826051 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of St John the Evangelist, Cambridge 52.207 0.118 United Kingdom JDS097 Homo sapiens 700 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826001 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Kirk Hill, St Andrews 56.339 -2.785 United Kingdom KirkHill Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825996,SRS9825997,SRS9825998 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Valle da Gafaria, Lagos 37.098 -8.674 Portugal PAVd09_I.5 Homo sapiens 600 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826040,SRS9826041 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 St. Petersburg 59.9 30.3 Russia R7546-671 Homo sapiens 100 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA721828 SRS9826003,SRS9826004,SRS9826044 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF101 Homo sapiens 1000 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826022,SRS9826023 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF11 Homo sapiens 200 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826014,SRS9826015 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF21 Homo sapiens 400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826017,SRS9826018 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF25 Homo sapiens 500 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826019,SRS9826020 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF700 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9825988,SRS9825989 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF703 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9825992,SRS9825993 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF8 Homo sapiens 400 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826012,SRS9826013 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF800 Homo sapiens 800 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA721828 SRS9826024,SRS9825995 +Pfrengle2021 2021 10.1186/s12915-021-01120-2 Hospital of Sant Llàtzer / Santa Margarida, Barcelona 41.38 2.16 Spain UF803 Homo sapiens 900 10.1186/s12915-021-01120-2 bacteria Mycobacterium leprae tissue chromosome SRA raw PRJNA721828 SRS9826029,SRS9826030 +Jager2022 2022 10.1016/j.tube.2022.102181 Dominican church of Vác 47.777 19.127 Hungary body_210 Homo sapiens 200 10.1016/j.tube.2022.102181 bacteria Mycobacterium tuberculosis bone chromosome SRA raw PRJNA795622 SRS11554883 +Rieux2021 2021 10.1038/s41598-021-00518-w Bambari 5.766 20.661 Central African Republic P04808771 Manihot glaziovii 100 10.1038/s41598-021-00518-w virus African cassava mosaic virus leaf chromosome SRA raw PRJNA698751 SRS8172159 +Guellil2021 2021 10.1038/s41598-021-98214-2 Lazaretto dell’Osservanza, Imola 44.349 11.707 Italy IMO2 Homo sapiens 300 10.1038/s41598-021-98214-2 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB27822 ERS8555205,ERS8555208,ERS8555209,ERS8555210,ERS8555211 +Guellil2022 2022 10.1186/s13059-021-02580-z Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI064 Homo sapiens 1500 10.1186/s13059-021-02580-z bacteria Haemophilus influenzae tooth chromosome ENA raw PRJEB45013 ERS8968539 +Guellil2022 2022 10.1186/s13059-021-02580-z Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI064 Homo sapiens 1500 10.1186/s13059-021-02580-z bacteria Yersinia pestis tooth chromosome ENA raw PRJEB45013 ERS8968539 +Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK001 (176/4; Grave 19/20) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205112 +Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK003 (176/7; Grave 28/29) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205113 +Spyrou2022 2022 10.1038/s41586-022-04800-3 Kara-Djigach cemetery (Chapel 1), Chüy Valley 42.805 74.685 Kyrgyzstan BSK007 (5559/2; Grave 9) Homo sapiens 600 10.1038/s41586-022-04800-3 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB46734 ERS11205114 +Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC009 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB52494 ERS11891570 +Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC068 Homo sapiens 4200 10.1016/j.cub.2022.06.094 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB52494 ERS11891571 +Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC004 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB52494 ERS11891572 +Neumann2022 2022 10.1016/j.cub.2022.06.094 Hagios Charalambos cave, Crete 35.177 25.444 Greece HGC040 Homo sapiens 4100 10.1016/j.cub.2022.06.094 bacteria Salmonella enterica tooth chromosome ENA raw PRJEB52494 ERS11891573 +Vagene2022 2022 10.1038/s41467-022-28562-8 Moquegua, M6-Estuquiña -17.199 -70.943 Peru 82 Homo sapiens 700 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049946 +Vagene2022 2022 10.1038/s41467-022-28562-8 Las Delicias, Bogotá 4.601 -74.146 Colombia 281 Homo sapiens 700 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049948 +Vagene2022 2022 10.1038/s41467-022-28562-8 Candelaria La Nueva, Bogotá 4.57 -74.149 Colombia 386 Homo sapiens 500 10.1038/s41467-022-28562-8 bacteria Mycobacterium pinnipedii bone chromosome SRA raw PRJNA779792 SRS11049947 +Guellil2022b 2022 10.1126/sciadv.abo4435 Hospital of St John the Evangelist, Cambridge 52.207 0.118 United Kingdom JDS005 Homo sapiens 600 10.1126/sciadv.abo4435 virus Human alphaherpesvirus 1 tooth chromosome ENA raw PRJEB46097 ERS12438280 +Guellil2022b 2022 10.1126/sciadv.abo4435 Edix Hill, Cambridgeshire 52.136 -0.011 United Kingdom EDI111 Homo sapiens 1500 10.1126/sciadv.abo4435 virus Human alphaherpesvirus 1 tooth chromosome ENA raw PRJEB46097 ERS12438281 +Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Klebsiella pneumoniae dental calculus chromosome SRA raw PRJNA851947 SRS13524932 +Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Acinetobacter nosocomialis dental calculus chromosome SRA raw PRJNA851947 SRS13524932 +Austin2022 2022 10.1038/s42003-022-03890-z City Hospital #2, St. Louis, Missouri 38.632 -90.222 USA St.LI Homo sapiens 100 10.1038/s42003-022-03890-z bacteria Acinetobacter junii dental calculus chromosome SRA raw PRJNA851947 SRS13524932 +Long2022 2022 10.1038/s42003-022-03527-1 Basilica of St. Domenico Maggiore, Naples 40.848 14.254 Italy NASD1 Homo sapiens 400 10.1038/s42003-022-03527-1 bacteria Escherichia coli calcified nodule chromosome SRA raw PRJNA810725 SRS12115743 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Fermo, Marche 43.16 13.71 Italy Fer.T75 Homo sapiens 4400 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653538 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Ripatetta, Lucera, Foggia 41.3 15.2 Italy Rip.USD618 Homo sapiens 6100 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653590 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Ripatetta, Lucera, Foggia 41.3 15.2 Italy Rip.USD628 Homo sapiens 6100 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653591 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Bandita San Pantaleo, Tarquinia, Latium 42.25 11.75 Italy Tar.T71 Homo sapiens 4700 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653602 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Torre de Rubeis, Troia 41.22 15.18 Italy TR177 Homo sapiens 5200 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653605 +Quagliariello2022 2022 10.1038/s41467-022-34416-0 Passo di Corvo, Amendola plain 41.553 15.611 Italy PC-T5 Homo sapiens 7400 10.1038/s41467-022-34416-0 bacteria Olsenella sp. oral taxon 807 dental calculus chromosome SRA raw PRJNA791766 SRS11653578 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G78T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tooth chromosome ENA raw PRJEB49149 ERS9069028 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G79T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tissue chromosome ENA raw PRJEB49149 ERS9069039 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G27T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tooth chromosome ENA raw PRJEB49149 ERS9069033 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Hepatitis B virus tissue chromosome ENA raw PRJEB49149 ERS9069041 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G31T Homo sapiens 1200 10.1186/s13059-022-02806-8 virus Variola virus tissue chromosome ENA raw PRJEB49149 ERS9069030 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 bacteria Mycobacterium leprae tissue chromosome ENA raw PRJEB49149 ERS9069041 +Bonczarowska2022 2022 10.1186/s13059-022-02806-8 Lauchheim Mittelhofen settlement, Baden-Württemberg 48.872 10.25 Germany G83T Homo sapiens 1300 10.1186/s13059-022-02806-8 virus Parvovirus B19 tissue chromosome ENA raw PRJEB49149 ERS9069041 +Braun2020 2020 10.3390/microorganisms8020298 Chemnitz, Sachsen 50.83 12.92 Germany Chemnitz 1878 (M-0290509) Bovidae 140 10.3390/microorganisms8020298 bacteria Bacillus anthracis blood chromosome SRA raw PRJNA309927 SRS5865127 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Hågerup , Faaborg-Midtfyn Municipality 55.17 10.35 Denmark A19 x21 Homo sapiens 800 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579972 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Faldborg, Viborg Municipality 56.45 9.40 Denmark Gr GCx15 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579984 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G.25A Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579986 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 16 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16580002 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G207 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579991 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 861 x1035 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579973 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Faldborg, Viborg Municipality 56.45 9.40 Denmark ID 319 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579981 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Gråbrødre, Esbjerg Municipality 55.32 8.76 Denmark G. 25B x98 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579982 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Sejet, Horsens Municipality 55.81 9.92 Denmark A146x3011 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579983 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Tirup, Horsens Municipality 55.86 9.81 Denmark G371 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579985 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ribe Lindegården, Esbjerg Municipality 55.32 8.78 Denmark x1265 Homo sapiens 600 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579987 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ole Wormsgade, Horsens Municipality 55.86 9.86 Denmark x1155 A1155 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16580001 +Eaton2023 2023 10.1016/j.cub.2023.01.064 Ole Wormsgade, Horsens Municipality 55.86 9.86 Denmark A1480 x1480 Homo sapiens 700 10.1016/j.cub.2023.01.064 bacteria Yersinia pestis tooth chromosome SRA raw PRJNA926136 SRS16579988 +Rifkin2023 2023 10.1038/s42003-023-04582-y Ballito Bay -29.53 31.21 South Africa BBayA Homo sapiens 1900 10.1038/s42003-023-04582-y bacteria Rickettsia felis tissue chromosome SRA raw PRJNA930765 SRS16665771 +Sarhan2023 2023 10.1186/s12915-022-01509-7 Barfüsserkirche/Franciscan church of Basel 47.554 7.589 Switzerland 3045 Homo sapiens 200 10.1186/s12915-022-01509-7 bacteria Mycolicibacterium sp. brain chromosome ENA raw PRJEB44723 ERS10216488 +Swali2023 2023 10.1038/s41467-023-38393-w Charterhouse Warren, Mendip Hills, Somerset 51.299 -2.715 United Kingdom C10091 Homo sapiens 4000 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14891340 +Swali2023 2023 10.1038/s41467-023-38393-w Charterhouse Warren, Mendip Hills, Somerset 51.299 -2.715 United Kingdom C10098 Homo sapiens 4000 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14891341,ERS14891342 +Swali2023 2023 10.1038/s41467-023-38393-w Levens Deer Park ring cairn, Leven, Cumbria 54.268 -2.761 United Kingdom C10928 Homo sapiens 3900 10.1038/s41467-023-38393-w bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61230 ERS14909714,ERS14891343 +Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ75 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555610,ERS14555611,ERS14555612,ERS14555613,ERS14555614,ERS14555615,ERS14555616,ERS14555617 +Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ46 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555595,ERS14555596,ERS14555597,ERS14555598,ERS14555599,ERS14555600,ERS14555601,ERS14555602,ERS14555603,ERS14555604 +Clavel2023 2023 10.1016/j.isci.2023.106787 La Major Cathedral, Marseille, Bouches-du-Rhône 43.3 5.365 France MAJ38 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233,PRJEB59234 ERS14555592,ERS14555591,ERS14555590,ERS14555589,ERS14555588,ERS14555587 +Clavel2023 2023 10.1016/j.isci.2023.106787 Hôtel-Dieu Saint-Jean-Baptiste, Amiens 49.898 2.299 France AMIENS268 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555669,ERS14555670,ERS14555671 +Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY1015 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555624,ERS14555625,ERS14555626 +Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY1028 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555627,ERS14555628 +Clavel2023 2023 10.1016/j.isci.2023.106787 Les Rayettes, Martigues 43.415 5.039 France RAY3030 Homo sapiens 300 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555635,ERS14555636 +Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR8 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823096 +Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR11 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823072 +Clavel2023 2023 10.1016/j.isci.2023.106787 Lariey, Puy-Saint-Pierre, Hautes-Alpes 44.899 6.615 France LAR27 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS5823086,ERS14555637,ERS14555638 +Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8723 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555652,ERS14555653,ERS14555654 +Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8833 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555642 +Clavel2023 2023 10.1016/j.isci.2023.106787 Maladrerie Saint-Lazare, Beauvais 49.415 2.101 France SQ8962 Homo sapiens 400 10.1016/j.isci.2023.106787 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB59233 ERS14555651 +Neumann2023 2023 10.1553/archaeologia107 Drasenhofen 48.758 16.651 Austria DSH008 Homo sapiens 3900 10.1553/archaeologia107 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61070 ERS15547237,ERS15547235 +Neumann2023 2023 10.1553/archaeologia107 Drasenhofen 48.758 16.651 Austria DSH025 Homo sapiens 3900 10.1553/archaeologia107 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB61070 ERS15547238,ERS15547236 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 Sct. Trinitatis/Drotten,Viborg 56.45 9.4 Denmark X52 Homo sapiens 500 10.1098/rspb.2023.0622 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB60595 ERS14773586 +Bonczarowska2023 2023 10.1098/rspb.2023.0622 Sejet Ødekirkegård 55.816 9.925 Denmark X3003 Homo sapiens 400 10.1098/rspb.2023.0622 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB60595 ERS14773585 +Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA004 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884856,ERS14884857,ERS14884858,ERS14884859,ERS14884860 +Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA008 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884861 +Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA018 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884862 +Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA028 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884863 +Parker2023 2023 10.1371/journal.ppat.1011404 Krakauer Berg, Peißen, Halle (Saale), Saxony-Anhalt 51.5 12.05 Germany KRA032 Homo sapiens 600 10.1371/journal.ppat.1011404 bacteria Yersinia pestis skeleton chromosome ENA raw PRJEB61096 ERS14884864 +Long2023 2023 10.1371/journal.ppat.1011538 Convento del Beato Sante, Mombaroccio, Pesaro e Urbino 43.789 12.861 Italy Sante Brancorsini Homo sapiens 600 10.1371/journal.ppat.1011538 bacteria Brucella melitensis kidney stone chromosome SRA raw PRJNA966239 SRS17532534 +Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1845 Citrus aurantiifolia 200 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248955 +Campos2023 2023 10.1038/s41467-023-39950-z Khasi hills 25.58 91.63 India HERB_1852 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248956 +Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1854 Citrus aurantiifolia 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248959 +Campos2023 2023 10.1038/s41467-023-39950-z Bangladesh 24 90 Bangladesh HERB_1859 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248960 +Campos2023 2023 10.1038/s41467-023-39950-z India 22 79 India HERB_1865 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248961 +Campos2023 2023 10.1038/s41467-023-39950-z Luzon 16.5 122.2 Philippines HERB_1884 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248962 +Campos2023 2023 10.1038/s41467-023-39950-z Java -7.23 109.72 Indonesia HERB_1911 Citrus aurantiifolia 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248963 +Campos2023 2023 10.1038/s41467-023-39950-z Philippines 15 120 Philippines HERB_1915 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248964 +Campos2023 2023 10.1038/s41467-023-39950-z Yunnan 24.55 101.45 China HERB_1922 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248965 +Campos2023 2023 10.1038/s41467-023-39950-z Tlofofo 13.33 144.73 Guam HERB_1946 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248966 +Campos2023 2023 10.1038/s41467-023-39950-z Sanichare 26.67 88.02 Nepal HERB_1963 Citrus medica 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248957 +Campos2023 2023 10.1038/s41467-023-39950-z Mauritius -20.3 57.6 Mauritius HERB_1974 Citrus sp. 100 10.1038/s41467-023-39950-z bacteria Xanthomonas citri pv. citri leaf chromosome SRA raw PRJNA883598 SRS15248958 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji Shell Mound 37.87 140.91 Japan Sanganji-A1-Tooth Homo sapiens 3000 10.1038/jhg.2016.110 bacteria Clostridium tetani tooth chromosome SRA raw PRJDB4223 DRS021185 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Sanganji Shell Mound 37.87 140.91 Japan Sanganji-A2-Tooth Homo sapiens 3000 10.1038/jhg.2016.110 bacteria Clostridium tetani tooth chromosome SRA raw PRJDB4223 DRS021186 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir Rifeh Cemetery 27.097 31.207 Egypt Deir-Rifeh-KNIII-Tooth Homo sapiens 3800 10.1016/j.jasrep.2017.12.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB20294 ERS1647163 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Deir Rifeh Cemetery 27.097 31.207 Egypt Deir-Rifeh-KNII-Tooth Homo sapiens 3800 10.1016/j.jasrep.2017.12.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB20294 ERS1660772 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Haunstetten Unterer Talweg 85 48.318 10.891 Germany Augsburg-Tooth Homo sapiens 4200 10.1016/j.cub.2017.10.025 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB19335 ERS1892067 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-011-Tooth Homo sapiens 1200 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906197 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-004-Tooth Homo sapiens 1200 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906198 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gran Canaria 27.92 -15.547 Spain GranCanaria-005-Tooth Homo sapiens 1000 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906199 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gran Canaria 27.92 -15.547 Spain GranCanaria-008-Tooth Homo sapiens 1000 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906202 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-012-Tooth Homo sapiens 1300 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906203 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Tenerife 28.291 -16.629 Spain Tenerife-013-Tooth Homo sapiens 1300 10.1016/j.cub.2017.09.059 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB86458 ERS1906204 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Teposcolula-Yucundaa; Mixteca Alta region, Oaxaca 17.502 -97.467 Mexico Tepos_35-Tooth Homo sapiens 400 10.1038/s41559-017-0446-6 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB23438 ERS2020227 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Cueva de los Lagos 41.962 -1.993 Spain Cueva_de_los_Lagos-Tooth Homo sapiens 4000 10.1073/pnas.1717762115 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB23467 ERS2059523 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Yámana 54.933 -67.616 Chile Yámana-Tooth Homo sapiens 800 10.1186/s40168-016-0221-y bacteria Clostridium tetani tooth chromosome ENA raw PRJEB24629 ERS2160137 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Vác 47.784 19.135 Hungary Vác-Mummy-Tissue Homo sapiens 200 10.1038/ncomms7717 bacteria Clostridium tetani tissue chromosome ENA raw PRJEB7454 ERS563409 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Maderas Enco -18.478 -70.312 Chile Chinchorro-Mummy-Bone Homo sapiens 200 10.1126/science.aab3884 bacteria Clostridium tetani bone chromosome ENA raw PRJEB9733 ERS793932 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Piedra Gorda 23.6 -109.6 Mexico Pericues-BC28-Bone Homo sapiens 550 10.1126/science.aab3884 bacteria Clostridium tetani bone chromosome ENA raw PRJEB9733 ERS793942 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 l’Observance in Marseille 43.296 5.369 France Marseille-Tooth Homo sapiens 200 10.7554/eLife.12994 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB12163 ERS1020860 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Saints Màrtirs Just i Pastor, Barcelona 41.387 2.168 Spain Barcelona-3031-Tooth Homo sapiens 1400 10.1016/j.chom.2016.05.012 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB13664 ERS1124787 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Saint-Laurent-de-la-Cabrerisse 43.084 2.7 France SLC-France-Tooth Homo sapiens 1300 10.1073/pnas.1812865115 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB24499 ERS2865271 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Karlova, Tartu 58.371 26.732 Estonia Karolva-Tooth Homo sapiens 4200 10.1098/rspb.2019.1528 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB32786 ERS3568107 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1655-Tooth Homo sapiens 3100 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635957 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1595-Tooth Homo sapiens 2900 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635963 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1668-Tooth Homo sapiens 2200 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3635986,ERS3636003 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1671-Tooth Homo sapiens 2100 10.1038/ncomms15694 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3636004 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Abusir el-Meleq, Middle Egypt 29.9 31.2 Egypt Abusir1607-Tooth Homo sapiens 1900 10.1186/s12915-020-00839-8 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB33848 ERS3636032 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Dacaozi site, Pingan county, Qinghai province 36.5 102.108 China Dacaozi-Tooth Homo sapiens 1900 10.1371/journal.pone.0060307 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB36297 ERS4255307 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Riga 56.95 24.121 Latvia Riga_Cemetery-Tooth Homo sapiens 300 10.1038/s41598-020-71530-9 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB36413 ERS4266549 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.476 -76.016 Peru Chincha-UC12-12-Tooth Homo sapiens 400 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421181 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.476 -76.016 Peru Chincha-UC12-24-Tooth Homo sapiens 400 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421183 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chincha -13.477 -76.025 Peru Chincha-UC8-8168-Tooth Homo sapiens 300 10.1073/pnas.2005965117 bacteria Clostridium tetani tooth chromosome ENA raw PRJEB37726 ERS4421185 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Chiribaya Alta, Cemetery 1 -17.635 -71.293 Peru Chiribaya_Alta-Bone Homo sapiens 800 10.1038/nature13591 bacteria Clostridium tetani bone chromosome SRA raw PRJNA244165 SRS591994 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 El Yaral, Cemetery 2 -17.149 -70.924 Peru El_Yaral-Bone Homo sapiens 700 10.1038/nature13591 bacteria Clostridium tetani bone chromosome SRA raw PRJNA244165 SRS592075 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Laguna de los Condores -6.848 -77.698 Peru Peru-NA40-Bone Homo sapiens 1100 10.1016/j.ajhg.2013.10.002 bacteria Clostridium tetani bone chromosome SRA raw PRJNA246597 SRS620293 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Laguna de los Condores -6.848 -77.698 Peru Peru-NA42-Bone Homo sapiens 1100 10.1016/j.ajhg.2013.10.002 bacteria Clostridium tetani bone chromosome SRA raw PRJNA246597 SRS620295 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Pueblo Bonito, New Mexico 36.06 -107.961 USA Pueblo_Bonito-Tooth Homo sapiens 900 10.1371/journal.pone.0060307 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA353635 SRS1853899 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Gniezno, Wielkopolska 52.54 17.59 Poland Gniezno-Tooth Homo sapiens 1000 10.1093/gigascience/gix044 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA354503 SRS1815300 +Hodgkins2023 2023 10.1038/s41467-023-41174-0 Punta Candelero 18.091 -65.789 Puerto Rico Punta_Candelero-Tooth Homo sapiens 1100 10.1093/molbev/msz267 bacteria Clostridium tetani tooth chromosome SRA raw PRJNA557308 SRS5212084 +Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1541 Homo sapiens 2000 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463028 +Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1557 Homo sapiens 2000 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463030 +Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1390 Homo sapiens 2300 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463029 +Majander2024 2024 10.1038/s41586-023-06965-x Jabuticabeira II (UTM 22 J) -28.588 -48.96 Brazil ZH1540 Homo sapiens 1800 10.1038/s41586-023-06965-x bacteria Treponema pallidum bone chromosome ENA raw PRJEB62647 ERS15463027 +Rozwalak2024 2024 10.1038/s41467-023-44370-0 Cueva de los Muertos Chiquitos (Zape) 25.771 -105.786 Mexico Zape3 Homo sapiens 1300 10.1038/s41586-021-03532-0 virus Mushuvirus mushu palaeofaeces chromosome GenBank assembly PRJNA561510 BK063464 +Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH2-F Homo sapiens 3800 10.1093/molbev/msae017 bacteria Tannerella forsythia tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977755 +Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH2-B Homo sapiens 3800 10.1093/molbev/msae017 bacteria Streptococcus mutans tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977754 +Jackson2024 2024 10.1093/molbev/msae017 Killuragh 52.6 -8.33 Ireland KGH1-E Homo sapiens 3800 10.1093/molbev/msae017 bacteria Tannerella forsythia tooth chromosome ENA raw,reference_aligned PRJEB64128 ERS15977753 +Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H50_1 Homo sapiens 600 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486703 +Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H80_1 Homo sapiens 900 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486681 +Urban2024 2024 10.1016/j.cub.2024.04.006 St. Mary Magdalene leprosarium, Winchester 51.059 -1.308 United Kingdom MMW_H94_1 Homo sapiens 700 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae tooth chromosome SRA raw PRJNA1021938 SRS20486688 +Urban2024 2024 10.1016/j.cub.2024.04.006 Staple Gardens, Winchester 51.064 -1.317 United Kingdom SGW_S3_1 Sciurus vulgaris 1000 10.1016/j.cub.2024.04.006 bacteria Mycobacterium leprae bone chromosome SRA raw PRJNA1021938 SRS20486690 +Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM86 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135916 +Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY19 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135917 +Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM12 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135918 +Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM16 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135919 +Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM18 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135920 +Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM23 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135921 +Sun2024 2024 10.1038/s41467-024-47358-6 XiHe 39.07 115.93 China XHM31 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135922 +Sun2024 2024 10.1038/s41467-024-47358-6 NanYang 39.07 115.93 China NYM8 Homo sapiens 2400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135923 +Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT7 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135924 +Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT19 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135925 +Sun2024 2024 10.1038/s41467-024-47358-6 Bayanbulag 42.37 105.21 Mongolia AT24 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135926 +Sun2024 2024 10.1038/s41467-024-47358-6 TaoJiaZhai 36.9 101.66 China TJZM25-2 Homo sapiens 1765 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135927 +Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM47 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135928 +Sun2024 2024 10.1038/s41467-024-47358-6 Derestuj 50.6 106.12 Russia XN12 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135929 +Sun2024 2024 10.1038/s41467-024-47358-6 XingFuLinDai 34.35 108.95 China XFLDM173 Homo sapiens 800 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135930 +Sun2024 2024 10.1038/s41467-024-47358-6 LongTouShan 43.07 118.48 China 91KLH18 Homo sapiens 2700 10.1038/s41467-020-16557-2 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135931 +Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM18 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135932 +Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM48 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135933 +Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM97 Homo sapiens 2100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135934 +Sun2024 2024 10.1038/s41467-024-47358-6 FuLuTa 39.97 111.53 China FLTM101 Homo sapiens 2200 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135935 +Sun2024 2024 10.1038/s41467-024-47358-6 NiuHeLiang 41.25 119.41 China 96NVZIM6 Homo sapiens 5000 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135946 +Sun2024 2024 10.1038/s41467-024-47358-6 HengShui 35.5 111.58 China JHM2098 Homo sapiens 2500 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135947 +Sun2024 2024 10.1038/s41467-024-47358-6 TianTaiJie 37.88 112.57 China SBSM101 Homo sapiens 1500 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135948 +Sun2024 2024 10.1038/s41467-024-47358-6 HongHe 47.12 123.61 China HHM29 Homo sapiens 400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135949 +Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 98JJLM9 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135936 +Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 95JJLM34 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135937 +Sun2024 2024 10.1038/s41467-024-47358-6 JiangJiaLiang 40.13 114.02 China 95JJLM51 Homo sapiens 4100 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135938 +Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY12 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135939 +Sun2024 2024 10.1038/s41467-024-47358-6 Tsagaan Del 45.79 112.96 Mongolia MY17 Homo sapiens 700 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135940 +Sun2024 2024 10.1038/s41467-024-47358-6 QiLangShan 41.06 113.01 China ZQM16 Homo sapiens 1600 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135941 +Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM20 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135942 +Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM46 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135943 +Sun2024 2024 10.1038/s41467-024-47358-6 QuanErGou 43.65 92.16 China XBQM125 Homo sapiens 2900 10.1038/s41467-024-47358-6 virus Hepatitis B virus bone chromosome GSA reference_aligned PRJCA020853 SAMC3135944 +Sun2024 2024 10.1038/s41467-024-47358-6 BeiFang 37.13 81.61 China 11KBM13 Homo sapiens 3400 10.1038/s41467-024-47358-6 virus Hepatitis B virus tooth chromosome GSA reference_aligned PRJCA020853 SAMC3135945 +Lebrasseur2024 2024 10.1093/ve/vead087 Kamennyi Ambar 5 52.833 60.367 Russia UR17x29 Equus caballus 3800 10.1038/s41586-021-04018-9 virus Equid herpesvirus 4 bone chromosome ENA raw PRJEB44430 ERS7256200 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769380 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769381 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769382 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Tannerella forsythia tooth chromosome ENA raw PRJEB49091 ERS9769383 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769380 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769381 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769382 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Treponema denticola tooth chromosome ENA raw PRJEB49091 ERS9769383 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B3 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769380 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B5 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769381 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769382 +White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769383 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_1 Homo sapiens 5200 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529513 +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_2 Homo sapiens 5100 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529514 +Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1385 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164983 +Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2272 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164984 +Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1984 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164985 +Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1986 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164986 +Fiddaman2023 2023 10.1126/science.adg2238 Bard-e Mar (Bem), Kurdistan 35.161 46.370 Iran OL2178 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164987 +Fiddaman2023 2023 10.1126/science.adg2238 Strasbourg Rue de Lucerne - Rue du Jeu de Paume 48.578 7.757 France OL1936 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164988 +Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1389 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164989 +Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1987 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164990 +Fiddaman2023 2023 10.1126/science.adg2238 Andlau 48.388 7.414 France OL1934 Gallus gallus 900 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164991 +Fiddaman2023 2023 10.1126/science.adg2238 Elabuga hillfort 55.746 52.032 Russia OL1599 Gallus gallus 300 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164992 +Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2268 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164993 +Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164994 +Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995 +Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996 +Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997 diff --git a/assets/enums/sample_host.json b/assets/enums/sample_host.json index 13c63d6d3..0bf487726 100644 --- a/assets/enums/sample_host.json +++ b/assets/enums/sample_host.json @@ -36,8 +36,6 @@ "Lithobates pipiens", "Equus caballus", "Sciurus vulgaris", - "Gallus gallus", - "Gorilla gorilla", - "Pongo abelii" + "Gallus gallus" ] } From f11252079e95f791d12c97f3879b90f4f6cb3837 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 17:01:27 +0100 Subject: [PATCH 64/67] Update sample_host.json --- assets/enums/sample_host.json | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/assets/enums/sample_host.json b/assets/enums/sample_host.json index 0bf487726..13c63d6d3 100644 --- a/assets/enums/sample_host.json +++ b/assets/enums/sample_host.json @@ -36,6 +36,8 @@ "Lithobates pipiens", "Equus caballus", "Sciurus vulgaris", - "Gallus gallus" + "Gallus gallus", + "Gorilla gorilla", + "Pongo abelii" ] } From 7c3e77a3d7840600f4b9efd5ba6b64735529a00b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Fri, 7 Feb 2025 17:05:16 +0100 Subject: [PATCH 65/67] Update singlegenome_species.json --- assets/enums/singlegenome_species.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/assets/enums/singlegenome_species.json b/assets/enums/singlegenome_species.json index edb399dfe..4bd8f93ac 100644 --- a/assets/enums/singlegenome_species.json +++ b/assets/enums/singlegenome_species.json @@ -56,7 +56,7 @@ "Gallid alphaherpesvirus 2", "Streptococcus pneumoniae", "Yersinia enterocolitica", - "Erysipelothrix rhusiopathiae" + "Erysipelothrix rhusiopathiae", "Monkeypox virus" ] } From 953a3ad0de8a60641637ce5ecb7cc375a54010b9 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Peare=20Bartholdy?= <47455812+bbartholdy@users.noreply.github.com> Date: Mon, 10 Feb 2025 17:40:55 +0100 Subject: [PATCH 66/67] fix issues in README #1341 (#1378) --- assets/documentation/libraries/README.md | 35 ++++++++++++------------ 1 file changed, 17 insertions(+), 18 deletions(-) diff --git a/assets/documentation/libraries/README.md b/assets/documentation/libraries/README.md index a00d94511..9028dd5c7 100644 --- a/assets/documentation/libraries/README.md +++ b/assets/documentation/libraries/README.md @@ -60,11 +60,12 @@ Library columns are as follows: ## data_publication_doi - Must correspond to the `publication_doi` of the publication in the - corresponding sample metadata table! -- Publication DOI. -- Or library permalink: - - e.g. [worldcat](https://www.worldcat.org/), [HAL](hal.archives-ouvertes.fr) - etc. +corresponding sample metadata table! +- Publication DOI. _Not_ the full URL, just the DOI + - e.g. 10.1038/ng.2906 + - You can test it by adding it on to the end of https://doi.org/ and see if it resolves to the publication (e.g. https://doi.org/10.1038/ng.2906) +- Or library permalink (full URL): + - e.g. [worldcat](https://www.worldcat.org/), [HAL](hal.archives-ouvertes.fr) etc. > ⚠️ Mandatory value @@ -96,17 +97,11 @@ Library columns are as follows: ## archive_project -- Must correspond to the `archive_project` of the publication in the - corresponding sample metadata table! -- A project level accession code under which all libraries of a project are - assigned to. +- Must correspond to the `archive_project` of the publication in the corresponding sample metadata table! +- A project level accession code under which all libraries of a project are assigned to. - Specific examples: - - - Archive: ENA/SRA/DDBJ: should be _primary_ accession code beginning with - `PRJ`. [Example](https://www.ebi.ac.uk/ena/browser/view/PRJNA438985). - - Archive: MG-RAST: should be accession code beginning with `mgp`. - [Example](https://www.mg-rast.org/mgmain.html?mgpage=project&project=mgp13354). - + - Archive: ENA/SRA/DDBJ: should be _primary_ accession code beginning with `PRJ`. [Example](https://www.ebi.ac.uk/ena/browser/view/PRJNA438985). + - Archive: MG-RAST: should be accession code beginning with `mgp`. [Example](https://www.mg-rast.org/mgmain.html?mgpage=project&project=mgp13354). - Missing value: `Unknown` ## archive_sample_accession @@ -177,6 +172,9 @@ Library columns are as follows: primary source protocol if referenced (e.g. if 'libraries prepared as described in Meyer and Kircher', use polymerase cited there. If you go down a citation chain, 'as in X, as in Y, as in Z', specify `Unknown`. +- Specific examples: + - [Kircher et al. (2012) Nucleic Acids Research](https://doi.org/10.1093/nar/gkr771): AmpliTaq Gold DNA + - [Meyer & Kircher (2010) Cold Spring Harbour Protocols](https://doi.org/10.1101/pdb.prot5448): Phusion Hot Start High-Fidelity DNA > ⚠️ Must follow categories specified in > `assets/enums/library_polymerase.json` @@ -212,7 +210,7 @@ Library columns are as follows: ## instrument_model - Sequencing machine used for sequencing the library. -- Follows [ENA categories](https://www.ebi.ac.uk/ena/portal/api/controlledVocab?field=instrument_model). +- Follows [ENA categories](https://github.com/enasequence/webin-cli/blob/master/src/main/resources/uk/ac/ebi/ena/webin/cli/reads/instrument.properties). - In most cases for aDNA labs will be some form of Illumina platform. > ⚠️ If not described in the ENA table, or there is discrepency with the paper, specify: `unspecified` @@ -287,7 +285,7 @@ Library columns are as follows: - Download link to raw data files. - Should start with `ftp`, `https`, or `http`. - Can be semi-colon separated list for paired-end sequenced runs. -- Link must allow direct download of files via command-line utility e.g. with wget or curl. I.e., the link must send you directly to a file, not a gateway page. +- Link must allow direct download of files via command-line utility e.g. with `wget` or `curl`. I.e., the link must send you directly to a file, not a gateway page. > ⚠️ Mandatory value @@ -312,4 +310,5 @@ Library columns are as follows: - File sizes of corresponding download files in bytes. - This can be used to estimated HDD space that will be used after download. - Can be semi-colon separated list for paired-end data, and in some cases paired-end with singletons. -- > ⚠️ Mandatory value + +> ⚠️ Mandatory value From 0e0930a4f42cd4a56c687fc628a715d568b08bf6 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Aida=20Andrades=20Valtue=C3=B1a?= Date: Thu, 13 Feb 2025 20:51:29 +0100 Subject: [PATCH 67/67] Added Susat2024 C14 (#1336) * Added Susat2024 C14 * Update CHANGELOG.md * corrected missing values * c14 Susat2024 * C14 Susat2024 --------- Co-authored-by: KaHea-21 --- CHANGELOG.md | 2 ++ .../dates/ancientsinglegenome-hostassociated_dates.tsv | 3 ++- 2 files changed, 4 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 79b0ba0cb..d3d483831 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -20,6 +20,8 @@ and this project follows to [Calendar Versioning](https://calver.org/). - C14 deBarrosDamgaard2018 10.1038/s41586-018-0094-2 (added by @marcel-keller) +- C14 Susat 2024 10.1038/s42003-024-06676-7 (added by @aidaanva) + #### Ancient Metagenome: Environmental ### Changed diff --git a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv index 9091f8200..da67ae5b4 100644 --- a/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv +++ b/ancientsinglegenome-hostassociated/dates/ancientsinglegenome-hostassociated_dates.tsv @@ -17,4 +17,5 @@ deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA101 PRJEB25891 ERS2367268 deBarrosDamgaard2018 2018 10.1038/s41586-018-0094-2 DA147 PRJEB25891 ERS2367269 FALSE FALSE 1450-1050 DNE DNE DNE DNE DNE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA TRUE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA Austin2022 2022 10.1038/s42003-022-03890-z St.LI PRJNA851947 SRS13524932 TRUE FALSE 20 FALSE main text DNE DNE FALSE DNE NA DNE DNE DNE unknown NA NA NA NA NA NA DNE DNE DNE DNE DNE DNE NA NA NA DNE NA DNE DNE DNE NA NA NA NA Susat2021 2021 10.1016/j.celrep.2021.109278 RV2039 PRJEB42185 ERS6638365 TRUE TRUE DNE FALSE main text 3 https://fu-berlin.primo.exlibrisgroup.com/permalink/49KOBV_FUB/1v1tp5h/alma9958233188402883 TRUE KIA 46462 AMS NR NR tooth 5049 33 -25.22 -99999 13.65 3.2 TRUE IntCal13 OxCal 4 NR 10.1111/j.1475-4754.2008.00457.x 5300 5050 NA cal BP 2 TRUE TRUE FRESHWATER 700 50 53 7 - +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_1 PRJEB49648 ERS19529513 TRUE TRUE DNE FALSE supplement text 1 10.1038/s42003-024-06676-7 TRUE KIA 55519 AMS NR NR tooth -99999 -99999 -99999 -99999 -99999 -99999 TRUE IntCal20 OxCal 4.4.4 NR 10.1111/j.1475-4754.2008.00457.x 5291 4979 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA +Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 PRJEB49648 ERS19529514 TRUE TRUE DNE FALSE supplement text 1 10.1038/s42003-024-06676-7 TRUE KIA 56332 AMS NR NR tooth -99999 -99999 -99999 -99999 -99999 -99999 TRUE IntCal20 OxCal 4.4.4 NR 10.1111/j.1475-4754.2008.00457.x 5265 4857 -99999 cal BP 2 FALSE DNE DNE NA NA NA NA