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Bergfeldt 2024 #1146

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jfy133 opened this issue Mar 14, 2024 · 6 comments
Open

Bergfeldt 2024 #1146

jfy133 opened this issue Mar 14, 2024 · 6 comments
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metagenome-hostassociated Samples containing e.g. original microbiomes of host individuals/organisms etc. new-publication To indicate publications to be added

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@jfy133
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jfy133 commented Mar 14, 2024 •
edited by bbartholdy
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Publication DOI or URL

https://doi.org/10.1038/s41598-024-56096-0

Additional context

PRJEB62680
@jfy133 jfy133 added metagenome-hostassociated Samples containing e.g. original microbiomes of host individuals/organisms etc. new-publication To indicate publications to be added samples labels Mar 14, 2024
@bbartholdy bbartholdy self-assigned this Jun 17, 2024
@bbartholdy bbartholdy removed their assignment Jun 28, 2024
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The data have not yet been made available (as of the date of this comment)

@jfy133
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jfy133 commented Jun 28, 2024

coudl you email them to check why? Maybe embargo was not set properly

@bbartholdy
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bbartholdy commented Jun 28, 2024 •
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Sure!

Update: Upload issues, but it is in progress!

@bbartholdy bbartholdy self-assigned this Jun 28, 2024
@bbartholdy bbartholdy removed their assignment Jan 9, 2025
@jfy133
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jfy133 commented Feb 6, 2025

@bbartholdy do you know where this got to in the end?

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Data have been uploaded, so it is ready to be added. I unassigned myself because it wasn't a quick 'n easy add and I thought it would be good to include in the hackathon.

@FreyaStein FreyaStein self-assigned this Feb 7, 2025
@FreyaStein FreyaStein moved this from Todo to In Progress in Hackathon Samples/Libraries: Feb. 2025 Feb 7, 2025
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The only novel samples are undated. Also, I was not able to find these samples under the Project Accession on ENA. Anyways, I will unassign myself

@FreyaStein FreyaStein removed their assignment Feb 7, 2025
@FreyaStein FreyaStein moved this from In Progress to Todo in Hackathon Samples/Libraries: Feb. 2025 Feb 7, 2025
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metagenome-hostassociated Samples containing e.g. original microbiomes of host individuals/organisms etc. new-publication To indicate publications to be added
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Hackathon Samples/Libraries: Feb. 2025
Status: Todo
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@jfy133 @bbartholdy @YuejiaoHuang @FreyaStein