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v2.4 failed run #17

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Kaddea opened this issue Feb 9, 2024 · 0 comments
Open

v2.4 failed run #17

Kaddea opened this issue Feb 9, 2024 · 0 comments

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@Kaddea
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Kaddea commented Feb 9, 2024

Hi,
running version 2.4 with python 3(.11).
HLA calling gets stuck during/after the 2nd iteration of non-class determination with the output below.

Thanks for any help :)

The digital haplotype is written into [filename]-ClassI-nonclass.digitalhaplotype3
Took 0.5041732788085938 seconds
Traceback (most recent call last):
File "seq2HLA.py", line 791, in
main()
File "seq2HLA.py", line 786, in main
pipe.run()
File "seq2HLA.py", line 152, in run
self.call_HLA(
File "seq2HLA.py", line 304, in call_HLA
if fourDigit_solutions1[locus] > 1:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
TypeError: '>' not supported between instances of 'str' and 'int'

@Kaddea Kaddea changed the title v2.3 failed run v2.4 failed run Feb 9, 2024
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