Parameterize cpus and memory

TRON-Bioinformatics · Feb 4, 2025 · f86e95b · f86e95b
1 parent 42e4d79
commit f86e95b
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/modules/merge_replicates.nf b/modules/merge_replicates.nf
@@ -2,8 +2,8 @@
 
 process MERGE_REPLICATES {
     tag "$name"
-    cpus 1
-    memory '4g'
+    cpus "${params.cpus}"
+    memory "${params.memory}"
 
     conda (params.enable_conda ? 'conda-forge::libgcc-ng=10.3.0 conda-forge::gsl=2.7 bioconda::samtools=1.15.1' : null)
 
@@ -37,4 +37,4 @@ process MERGE_REPLICATES {
     ${normal_merge_cmd}
     samtools index ${name}.normal.bam
     """
-}
+}