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Merge pull request #14 from TRON-Bioinformatics/bump-vafator-220
bump vafator version to v2.2.0
2 parents 2f5928f + f7fed72 commit a882743

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modules/04_vafator.nf

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@@ -12,7 +12,7 @@ process VAFATOR {
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tag "${patient_name}"
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publishDir "${params.output}/${patient_name}", mode: "copy"
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conda (params.enable_conda ? "bioconda::vafator=2.1.0" : null)
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conda (params.enable_conda ? "bioconda::vafator=2.2.0" : null)
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input:
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tuple val(patient_name), file(vcf), val(bams), val(purities), val(clonalities)
@@ -41,7 +41,7 @@ process MULTIALLELIC_FILTER {
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tag "${name}"
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publishDir "${params.output}/${name}", mode: "copy"
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conda (params.enable_conda ? "bioconda::vafator=2.1.0" : null)
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conda (params.enable_conda ? "bioconda::vafator=2.2.0" : null)
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input:
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tuple val(name), file(vcf)

nextflow.config

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -27,7 +27,7 @@ env {
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// Capture exit codes from upstream processes when piping
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process.shell = ['/bin/bash', '-euo', 'pipefail']
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VERSION = '3.0.0'
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VERSION = '3.1.0'
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manifest {
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name = 'TRON-Bioinformatics/tronflow-vcf-postprocessing'

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