diff --git a/.github/workflows/benchmark.yml b/.github/workflows/benchmark.yml index 61d7f327..5c66a87a 100644 --- a/.github/workflows/benchmark.yml +++ b/.github/workflows/benchmark.yml @@ -45,10 +45,10 @@ jobs: - name: Fetch Output run: | - # scp raina.ans@login-00.discovery.neu.edu:/work/VitekLab/Projects/Benchmarking/job_output.txt job_output.txt - # scp raina.ans@login-00.discovery.neu.edu:/work/VitekLab/Projects/Benchmarking/job_error.txt job_error.txt - scp raina.ans@login-00.discovery.neu.edu:/home/raina.ans/R/job_output.txt job_output.txt - scp raina.ans@login-00.discovery.neu.edu:/home/raina.ans/R/job_error.txt job_error.txt + scp raina.ans@login-00.discovery.neu.edu:/work/VitekLab/Projects/Benchmarking/job_output.txt job_output.txt + scp raina.ans@login-00.discovery.neu.edu:/work/VitekLab/Projects/Benchmarking/job_error.txt job_error.txt + # scp raina.ans@login-00.discovery.neu.edu:/home/raina.ans/R/job_output.txt job_output.txt + # scp raina.ans@login-00.discovery.neu.edu:/home/raina.ans/R/job_error.txt job_error.txt - name: Upload Output as Artifact diff --git a/benchmark/config.slurm b/benchmark/config.slurm index 36b49f69..0294e24b 100644 --- a/benchmark/config.slurm +++ b/benchmark/config.slurm @@ -1,6 +1,6 @@ #!/bin/bash #SBATCH --job-name=msstats_benchmark_job -##SBATCH --chdir=/work/VitekLab/Projects/Benchmarking/ +#SBATCH --chdir=/work/VitekLab/Projects/Benchmarking/ #SBATCH --output=job_output.txt #SBATCH --error=job_error.txt #SBATCH --time=01:00:00 # Set the maximum run time