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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>bio.comp.jlu.readxplorer</groupId>
<artifactId>readxplorer</artifactId>
<version>2.3.0-FINAL</version>
<packaging>pom</packaging>
<name>ReadXplorer</name>
<modules>
<module>application</module>
<module>application-cli</module>
<module>branding</module>
<module>centrallookup</module>
<module>readxplorer-api</module>
<module>readxplorer-databackend</module>
<module>readxplorer-utils</module>
<module>readxplorer-classificationupdate</module>
<module>readxplorer-cli</module>
<module>readxplorer-dashboard</module>
<module>readxplorer-exporter</module>
<module>readxplorer-mapping</module>
<module>readxplorer-parser</module>
<module>readxplorer-plotting</module>
<module>readxplorer-rnatrimming</module>
<module>readxplorer-thumbnail</module>
<module>readxplorer-vcfhandling</module>
<module>readxplorer-ui</module>
<module>readxplorer-ui-converter</module>
<module>readxplorer-ui-datamanagement</module>
<module>readxplorer-ui-importer</module>
<module>readxplorer-ui-options</module>
<module>readxplorer-ui-visualisation</module>
<module>readxplorer-ui-visualisation-reference</module>
<module>readxplorer-ui-visualisation-track</module>
<module>readxplorer-tools-coverageanalysis</module>
<module>readxplorer-tools-detailedviewer</module>
<module>readxplorer-tools-doubletrackviewer</module>
<module>readxplorer-tools-gasv</module>
<module>readxplorer-tools-readpairclassifier</module>
<module>readxplorer-tools-referenceeditor</module>
<module>readxplorer-tools-rnafolder</module>
<module>readxplorer-tools-snpdetection</module>
<module>readxplorer-tools-transcriptionanalyses</module>
<module>readxplorer-libs-h2</module>
<module>readxplorer-libs-jfreechart</module>
<module>lib.batik</module>
<module>lib.intervals</module>
<module>lib.geneticcodes</module>
<module>lib.parser.fasta</module>
<module>lib.parser.embl</module>
<module>lib.utilities</module>
</modules>
<properties>
<netbeans.version>RELEASE126</netbeans.version>
<brandingToken>readxplorer</brandingToken>
<project.displayname>ReadXplorer</project.displayname>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.url>www.readxplorer.org</project.url>
<netbeans.hint.license>gpl30</netbeans.hint.license>
</properties>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-api</artifactId>
<version>1.2.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-branding</artifactId>
<version>2.3.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-centrallookup</artifactId>
<version>1.1.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-classificationupdate</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-cli</artifactId>
<version>1.1.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-dashboard</artifactId>
<version>1.2.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-databackend</artifactId>
<version>1.2.2-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-exporter</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-mapping</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-parser</artifactId>
<version>1.2.2-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-plotting</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-rnatrimming</artifactId>
<version>1.2.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-thumbnail</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-coverageanalysis</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-detailedviewer</artifactId>
<version>1.2.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-doubletrackviewer</artifactId>
<version>1.2.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-gasv</artifactId>
<version>1.0.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-readpairclassifier</artifactId>
<version>1.1.3-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-referenceeditor</artifactId>
<version>1.2.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-rnafolder</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-snpdetection</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-tools-transcriptionanalyses</artifactId>
<version>1.3.3-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui</artifactId>
<version>1.2.3-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-converter</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-datamanagement</artifactId>
<version>1.2.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-importer</artifactId>
<version>1.3.0-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-options</artifactId>
<version>1.2.2-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-visualisation</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-visualisation-reference</artifactId>
<version>1.1.2-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-ui-visualisation-track</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-utils</artifactId>
<version>1.1.4-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-vcfhandling</artifactId>
<version>1.1.1-FINAL</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-libs-jri</artifactId>
<version>0.9-6</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-libs-h2</artifactId>
<version>1.3.176</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>readxplorer-libs-jfreechart</artifactId>
<version>1.0.15</version>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>batik.nbm</artifactId>
<version>1.7</version>
</dependency>
</dependencies>
</dependencyManagement>
<build>
<pluginManagement>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.8.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
<showDeprecation>true</showDeprecation>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<version>5.1.1</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.6</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.22.2</version>
</plugin>
<plugin>
<groupId>org.apache.netbeans.utilities</groupId>
<artifactId>nbm-maven-plugin</artifactId>
<version>4.5</version>
<extensions>true</extensions>
<configuration>
<brandingToken>${brandingToken}</brandingToken>
<cluster>${brandingToken}</cluster>
<licenseName>GPLv3</licenseName>
<licenseFile>License-GPLv3</licenseFile>
</configuration>
<executions>
<execution>
<goals>
<goal>autoupdate</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</pluginManagement>
</build>
</project>