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May 1, 2025
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beff92b
feat: validation history
jayceslesar Apr 18, 2025
c369720
format
jayceslesar Apr 18, 2025
41bb8a4
almost a working test
jayceslesar Apr 18, 2025
763e9f4
allow content_filter in snapshot.manifests
jayceslesar Apr 18, 2025
f200beb
simplify order of arguments to validation_history
jayceslesar Apr 18, 2025
7f6bf9d
simplify return in snapshot.manifests
jayceslesar Apr 18, 2025
c63cc55
tests passing
jayceslesar Apr 19, 2025
f2f3a88
correct ancestors_between
jayceslesar Apr 19, 2025
74d5569
fix to/from logic and allow optional `to_snapshot` arg in `validation…
jayceslesar Apr 19, 2025
167f9e4
remove a level of nesting with smarter clause
jayceslesar Apr 19, 2025
efe50b4
fix bad accessor
jayceslesar Apr 19, 2025
0793713
fix docstring
jayceslesar Apr 19, 2025
b10a0bf
Merge branch 'main' into feat/validation-history
jayceslesar Apr 19, 2025
d57133e
move `ValidationException` to `exceptions.py`, make `to_snapshot` req…
jayceslesar Apr 22, 2025
6ef1aa2
default to `Operation.OVERWRITE` in `validation_history` if summary i…
jayceslesar Apr 22, 2025
fce608f
preserve order of snapshots by changing response to a list instead of…
jayceslesar Apr 22, 2025
a6624d9
validation_history and from_ancestor argument alignment
jayceslesar Apr 23, 2025
0763056
raise error on summary operation being none in validation_history
jayceslesar Apr 23, 2025
cd0146f
Merge branch 'main' into feat/validation-history
jayceslesar Apr 23, 2025
d7c7088
Merge branch 'main' into feat/validation-history
jayceslesar Apr 24, 2025
fe8d103
Update pyiceberg/table/update/validate.py
jayceslesar Apr 24, 2025
f8c5fee
Update pyiceberg/table/update/validate.py
jayceslesar Apr 24, 2025
d95e6ed
formatting
jayceslesar Apr 24, 2025
87ee601
remove emoji (lol)
jayceslesar Apr 27, 2025
c16a3e6
vix validation exception check
jayceslesar Apr 27, 2025
e272b26
fix bug in ancestors_between
jayceslesar Apr 27, 2025
727845b
break into separate test
jayceslesar Apr 27, 2025
e2bba3f
Merge branch 'main' into feat/validation-history
jayceslesar Apr 27, 2025
a74d7a9
add test that ensures we raise an error
jayceslesar Apr 30, 2025
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20 changes: 19 additions & 1 deletion pyiceberg/table/snapshots.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@
from pydantic import Field, PrivateAttr, model_serializer

from pyiceberg.io import FileIO
from pyiceberg.manifest import DataFile, DataFileContent, ManifestFile, _manifests
from pyiceberg.manifest import DataFile, DataFileContent, ManifestContent, ManifestFile, _manifests
from pyiceberg.partitioning import UNPARTITIONED_PARTITION_SPEC, PartitionSpec
from pyiceberg.schema import Schema

Expand Down Expand Up @@ -255,6 +255,14 @@ def manifests(self, io: FileIO) -> List[ManifestFile]:
"""Return the manifests for the given snapshot."""
return list(_manifests(io, self.manifest_list))

def data_manifests(self, io: FileIO) -> List[ManifestFile]:
"""Return the data manifests for the given snapshot."""
return [manifest for manifest in self.manifests(io) if manifest.content == ManifestContent.DATA]

def delete_manifests(self, io: FileIO) -> List[ManifestFile]:
"""Return the delete manifests for the given snapshot."""
return [manifest for manifest in self.manifests(io) if manifest.content == ManifestContent.DELETES]


class MetadataLogEntry(IcebergBaseModel):
metadata_file: str = Field(alias="metadata-file")
Expand Down Expand Up @@ -429,3 +437,13 @@ def ancestors_of(current_snapshot: Optional[Snapshot], table_metadata: TableMeta
if snapshot.parent_snapshot_id is None:
break
snapshot = table_metadata.snapshot_by_id(snapshot.parent_snapshot_id)


def ancestors_between(
current_snapshot: Optional[Snapshot], oldest_snapshot: Snapshot, table_metadata: TableMetadata
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This doesn't looks correct: the current_snapshot is a required field oldest_snapshot could be None and in that case, we also should provide the entire list of ancestors of the current_snapshot

I think the implementation that's in progress on this PR is closer to what we'd want: https://github.com/apache/iceberg-python/pull/533/files

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this should now be resolved, thank you for the link to that

) -> Iterable[Snapshot]:
"""Get the ancestors of and including the given snapshot between the latest and oldest snapshot."""
for snapshot in ancestors_of(current_snapshot, table_metadata):
if snapshot.snapshot_id == oldest_snapshot.snapshot_id:
break
yield snapshot
79 changes: 79 additions & 0 deletions pyiceberg/table/update/validate.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,79 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
from pyiceberg.manifest import ManifestContent, ManifestFile
from pyiceberg.table import Table
from pyiceberg.table.snapshots import Operation, Snapshot, ancestors_between


class ValidationException(Exception):
"""Raised when validation fails."""


def validation_history(
table: Table,
starting_snapshot: Snapshot,
matching_operations: set[Operation],
manifest_content: ManifestContent,
parent_snapshot: Snapshot,
) -> tuple[list[ManifestFile], set[Snapshot]]:
"""Return newly added manifests and snapshot IDs between the starting snapshot and parent snapshot.

Args:
table: Table to get the history from
starting_snapshot: Starting snapshot
matching_operations: Operations to match on
manifest_content: Manifest content type to filter
parent_snapshot: Parent snapshot to get the history from

Raises:
ValidationException: If no matching snapshot is found or only one snapshot is found

Returns:
List of manifest files and set of snapshots matching conditions
"""
manifests_files: list[ManifestFile] = []
snapshots: set[Snapshot] = set()
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Java just returns ints, we can return Snapshot's as well, but with the set we lose the order.

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great, I am happy to remove this being a set, I was just attempting to copy what made sense from java

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This now returns a unique list, happy to modify that to allow duplicates if wanted

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Yes, or return Set[int], similar to Java :)

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__hash__ dunder on Snapshot ?

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nah, will just return the Set[int]

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__hash__ dunder on Snapshot ?

I like that as well, but let's do that in a separate PR 👍

Now we're back at a set, we can remove the in check below:

        if snapshot not in snapshots:
            snapshots.add(snapshot.snapshot_id)


last_snapshot = None
for snapshot in ancestors_between(starting_snapshot, parent_snapshot, table.metadata):
last_snapshot = snapshot
summary = snapshot.summary
if summary is None:
continue
if summary.operation in matching_operations:
snapshots.add(snapshot)
if manifest_content == ManifestContent.DATA:
manifests_files.extend(
[
manifest
for manifest in snapshot.data_manifests(table.io)
if manifest.added_snapshot_id == snapshot.snapshot_id
]
)
else:
manifests_files.extend(
[
manifest
for manifest in snapshot.delete_manifests(table.io)
if manifest.added_snapshot_id == snapshot.snapshot_id
]
)

if last_snapshot is None or last_snapshot.snapshot_id == starting_snapshot.snapshot_id:
raise ValidationException("No matching snapshot found.")

return manifests_files, snapshots
39 changes: 0 additions & 39 deletions tests/table/test_init.py
Original file line number Diff line number Diff line change
Expand Up @@ -57,7 +57,6 @@
Snapshot,
SnapshotLogEntry,
Summary,
ancestors_of,
)
from pyiceberg.table.sorting import (
NullOrder,
Expand Down Expand Up @@ -225,44 +224,6 @@ def test_snapshot_by_timestamp(table_v2: Table) -> None:
assert table_v2.snapshot_as_of_timestamp(1515100955770, inclusive=False) is None


def test_ancestors_of(table_v2: Table) -> None:
assert list(ancestors_of(table_v2.current_snapshot(), table_v2.metadata)) == [
Snapshot(
snapshot_id=3055729675574597004,
parent_snapshot_id=3051729675574597004,
sequence_number=1,
timestamp_ms=1555100955770,
manifest_list="s3://a/b/2.avro",
summary=Summary(Operation.APPEND),
schema_id=1,
),
Snapshot(
snapshot_id=3051729675574597004,
parent_snapshot_id=None,
sequence_number=0,
timestamp_ms=1515100955770,
manifest_list="s3://a/b/1.avro",
summary=Summary(Operation.APPEND),
schema_id=None,
),
]


def test_ancestors_of_recursive_error(table_v2_with_extensive_snapshots: Table) -> None:
# Test RecursionError: maximum recursion depth exceeded
assert (
len(
list(
ancestors_of(
table_v2_with_extensive_snapshots.current_snapshot(),
table_v2_with_extensive_snapshots.metadata,
)
)
)
== 2000
)


def test_snapshot_by_id_does_not_exist(table_v2: Table) -> None:
assert table_v2.snapshot_by_id(-1) is None

Expand Down
65 changes: 64 additions & 1 deletion tests/table/test_snapshots.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,16 @@
from pyiceberg.manifest import DataFile, DataFileContent, ManifestContent, ManifestFile
from pyiceberg.partitioning import PartitionField, PartitionSpec
from pyiceberg.schema import Schema
from pyiceberg.table.snapshots import Operation, Snapshot, SnapshotSummaryCollector, Summary, update_snapshot_summaries
from pyiceberg.table import Table
from pyiceberg.table.snapshots import (
Operation,
Snapshot,
SnapshotSummaryCollector,
Summary,
ancestors_between,
ancestors_of,
update_snapshot_summaries,
)
from pyiceberg.transforms import IdentityTransform
from pyiceberg.typedef import Record
from pyiceberg.types import (
Expand Down Expand Up @@ -341,3 +350,57 @@ def test_invalid_type() -> None:
)

assert "Could not parse summary property total-data-files to an int: abc" in str(e.value)


def test_ancestors_of(table_v2: Table) -> None:
assert list(ancestors_of(table_v2.current_snapshot(), table_v2.metadata)) == [
Snapshot(
snapshot_id=3055729675574597004,
parent_snapshot_id=3051729675574597004,
sequence_number=1,
timestamp_ms=1555100955770,
manifest_list="s3://a/b/2.avro",
summary=Summary(Operation.APPEND),
schema_id=1,
),
Snapshot(
snapshot_id=3051729675574597004,
parent_snapshot_id=None,
sequence_number=0,
timestamp_ms=1515100955770,
manifest_list="s3://a/b/1.avro",
summary=Summary(Operation.APPEND),
schema_id=None,
),
]


def test_ancestors_of_recursive_error(table_v2_with_extensive_snapshots: Table) -> None:
# Test RecursionError: maximum recursion depth exceeded
assert (
len(
list(
ancestors_of(
table_v2_with_extensive_snapshots.current_snapshot(),
table_v2_with_extensive_snapshots.metadata,
)
)
)
== 2000
)


def test_ancestors_between(table_v2_with_extensive_snapshots: Table) -> None:
oldest_snapshot = table_v2_with_extensive_snapshots.snapshots()[0]
assert (
len(
list(
ancestors_between(
table_v2_with_extensive_snapshots.current_snapshot(),
oldest_snapshot,
table_v2_with_extensive_snapshots.metadata,
)
)
)
== 1999
)
33 changes: 33 additions & 0 deletions tests/table/test_validate.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,33 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
# pylint:disable=redefined-outer-name,eval-used
from typing import cast

from pyiceberg.manifest import ManifestContent
from pyiceberg.table import Table
from pyiceberg.table.snapshots import Operation, Snapshot
from pyiceberg.table.update.validate import validation_history


def test_validation_history(table_v2_with_extensive_snapshots: Table) -> None:
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Could we add another test which tests the expected failure when from_snapshot value doesn't match a snapshot in the history of the table?

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Added!

"""Test the validation history function."""
oldest_snapshot = table_v2_with_extensive_snapshots.snapshots()[0]
newest_snapshot = cast(Snapshot, table_v2_with_extensive_snapshots.current_snapshot())
manifests, snapshots = validation_history(
table_v2_with_extensive_snapshots, newest_snapshot, {Operation.APPEND}, ManifestContent.DATA, oldest_snapshot
)
assert len(snapshots) == 2