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### Example 1 - Evaluate and compare heterogenous scanpy atlases
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Evaluate and compare different atlases:
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- [ Example 1] ( CheckAtlas_example_1/Checkatlas_MultiQC.html )
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+ ! [ Example 1] ( CheckAtlas_example_1/Checkatlas_MultiQC.html )
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### Example 2 - Evaluate different version of the same atlas
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Evaluate different version of your atlas:
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- [ Example 2] ( CheckAtlas_example_2/Checkatlas_MultiQC.html )
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+ ! [ Example 2] ( CheckAtlas_example_2/Checkatlas_MultiQC.html )
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### Example 3 - Evaluate Scanpy, Seurat and CellRanger atlases
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Evaluate Scanpy, Seurat and CellRanger objects in your folder:
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- [ Example 3] ( CheckAtlas_example_3/Checkatlas_MultiQC.html )
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+ ! [ Example 3] ( CheckAtlas_example_3/Checkatlas_MultiQC.html )
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### Example 4 - Evaluate post-process and raw atlases
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Evaluate an integrated Scanpy atlas with the corresponding raw CellRanger atlases:
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- [ Example 3] ( CheckAtlas_example_4/Checkatlas_MultiQC.html )
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+ ! [ Example 3] ( CheckAtlas_example_4/Checkatlas_MultiQC.html )
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### Example 5 - Avaluate different cellranger version atlases
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Evaluate different Cellranger atlases with multiple chemistry version and cellranger version:
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- [ Example 3] ( CheckAtlas_example_5/Checkatlas_MultiQC.html )
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+ ! [ Example 3] ( CheckAtlas_example_5/Checkatlas_MultiQC.html )
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## Installation
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