thredds: upgrade to v5.5

Replay the diff at commit
43646c5
from PR #413

Author: tlvu

birdhouse/config/thredds/catalog.xml.template

@@ -11,7 +11,8 @@
         <service name="iso" serviceType="ISO" base="/twitcher/ows/proxy/thredds/iso/"/>
         <service name="wcs" serviceType="WCS" base="/twitcher/ows/proxy/thredds/wcs/" />
         <service name="wms" serviceType="WMS" base="/twitcher/ows/proxy/thredds/wms/" />
-        <service name="subsetServer" serviceType="NetcdfSubset" base="/twitcher/ows/proxy/thredds/ncss/" />
+        <service name="ncssGrid" serviceType="NetcdfSubset" base="${TWITCHER_PROTECTED_PATH}/thredds/ncss/grid/" />
+        <service name="ncssPoint" serviceType="NetcdfSubset" base="${TWITCHER_PROTECTED_PATH}/thredds/ncss/point/" />
     </service>
 
     <datasetScan name="${THREDDS_SERVICE_DATA_LOCATION_NAME}" ID="${THREDDS_SERVICE_DATA_URL_PATH}" path="${THREDDS_SERVICE_DATA_URL_PATH}" location="${THREDDS_SERVICE_DATA_LOCATION_ON_CONTAINER}">

birdhouse/config/thredds/default.env

@@ -1,7 +1,7 @@
 # All env in this default.env can be overridden by env.local.
 
 # thredds-docker >= 4.6.18 or >= 5.2 strongly recommended to avoid Log4J CVE-2021-44228.
-export THREDDS_VERSION=4.6.18-unidata-2022-01
+export THREDDS_VERSION="5.5-unidata-2024-11-19-with-tds-plugin-jar-with-dependencies.jar"
 export THREDDS_DOCKER=pavics/thredds-docker
 export THREDDS_IMAGE="${THREDDS_DOCKER}:${THREDDS_VERSION}"
 export THREDDS_ORGANIZATION="Birdhouse"

birdhouse/config/thredds/wmsConfig.xml

@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE wmsConfig SYSTEM "http://www.unidata.ucar.edu/schemas/thredds/dtd/ncwms/wmsConfig.dtd">
+<!DOCTYPE wmsConfig SYSTEM "https://schemas.unidata.ucar.edu/thredds/dtd/ncwms/wmsConfig.dtd">
 <!--
 Detailed configuration of the WMS service.  This config file can be used to
 set default styling parameters for each dataset/variable, and to enable or disable