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check vpm regularization #127

check vpm regularization

check vpm regularization #127

Triggered via push January 30, 2025 18:20
Status Failure
Total duration 7m 57s
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Matrix: test
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10 errors, 2 warnings, and 3 notices
Julia nightly - ubuntu-latest - x64 - push
Process completed with exit code 1.
Julia 1.6 - ubuntu-latest - x64 - push
Process completed with exit code 1.
Julia nightly - windows-latest - x64 - push
Process completed with exit code 1.
Julia nightly - macOS-latest - x64 - push
Process completed with exit code 1.
Documentation: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/guided_examples.md:223-248 ```@example guidedex vortex_path = normpath(joinpath(splitdir(pathof(fmm))[1], "..", "test", "vortex.jl")) include(vortex_path) function generate_vortex(seed, n_bodies; radius_factor=0.1, strength_factor=1.0) Random.seed!(seed) bodies = rand(8,n_bodies) bodies[1:3,:] = rand(3,n_bodies) # body positions bodies[4,:] ./= (n_bodies^(1/3)*2) # body radii bodies[4,:] .*= radius_factor bodies[5,:] .*= strength_factor # body strengths system = VortexParticles(bodies) return system end target_one = generate_gravitational(123, 100) target_two = generate_vortex(124, 100) source_one = generate_gravitational(125, 100) source_two = generate_vortex(126, 100) fmm.fmm!((target_one, target_two), (source_one, source_two)) ``` exception = LoadError: ParseError: # Error @ /home/runner/work/FastMultipole/FastMultipole/test/vortex.jl:36:16 position = rand(3, n_bodies) strength = 2.*rand(3, n_bodies) .- 1.0 # └┘ ── ambiguous `.` syntax; add whitespace to clarify (eg `1.+2` might be `1.0+2` or `1 .+ 2`) Stacktrace: [1] top-level scope @ ~/work/FastMultipole/FastMultipole/test/vortex.jl:36 [2] include @ ./Base.jl:557 [inlined] [3] include(x::String) @ Main.__atexample__named__guidedex ~/.julia/packages/Documenter/Bs999/src/utilities/utilities.jl:617 [4] top-level scope @ guided_examples.md:225 [5] eval @ ./boot.jl:430 [inlined] [6] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [7] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [8] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [9] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [10] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [11] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [12] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [13] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801 in expression starting at /home/runner/work/FastMultipole/FastMultipole/test/vortex.jl:36
Documentation: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/guided_examples.md:265-273 ```@example guidedex target_one = generate_gravitational(123, 100) target_two = generate_vortex(124, 100) source_one = generate_gravitational(125, 100) fmm.fmm!((target_one, target_two), source_one, scalar_potential=[true, false], velocity=[true, true], velocity_gradient=[false, false]) ``` exception = UndefVarError: `generate_vortex` not defined in `Main.__atexample__named__guidedex` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ guided_examples.md:267 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
Documentation: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/guided_examples.md:279-287 ```@example guidedex target_filepath = "target_tree" source_filepath = "source_tree" target_tree, source_tree = fmm.fmm!((target_one, target_two), source_one; save_tree_target=true, save_name_target=target_filepath, save_tree_source=true, save_name_source=source_filepath) ``` exception = UndefVarError: `target_two` not defined in `Main.__atexample__named__guidedex` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ guided_examples.md:284 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
Documentation
Process completed with exit code 1.
Julia 1.6 - macOS-latest - x64 - push
Process completed with exit code 1.
Julia 1.6 - windows-latest - x64 - push
Process completed with exit code 1.
Julia nightly - macOS-latest - x64 - push
[setup-julia] x64 arch has been requested on a macOS runner that has an arm64 (Apple Silicon) architecture. You may have meant to use the "aarch64" arch instead (or left it unspecified for the correct default).
Julia 1.6 - macOS-latest - x64 - push
[setup-julia] x64 arch has been requested on a macOS runner that has an arm64 (Apple Silicon) architecture. You may have meant to use the "aarch64" arch instead (or left it unspecified for the correct default).
Julia 1.6 - ubuntu-latest - x64 - push
[setup-julia] If you are testing 1.6 as a Long Term Support (lts) version, consider using the new "lts" version specifier instead of "1.6" explicitly, which will automatically resolve the current lts.
Julia 1.6 - macOS-latest - x64 - push
[setup-julia] If you are testing 1.6 as a Long Term Support (lts) version, consider using the new "lts" version specifier instead of "1.6" explicitly, which will automatically resolve the current lts.
Julia 1.6 - windows-latest - x64 - push
[setup-julia] If you are testing 1.6 as a Long Term Support (lts) version, consider using the new "lts" version specifier instead of "1.6" explicitly, which will automatically resolve the current lts.