diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..b1e35db --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,35 @@ +# This CITATION.cff file was generated with cffinit. +# Visit https://bit.ly/cffinit to generate yours today! + +cff-version: 1.2.0 +title: SARS Genomic Surveillance +message: >- + You may cite these materials using the metadata in this + file. Please cite our materials if you publish materials + derived from these, run a workshop using them, or use the + information in your own work. +type: dataset +authors: + - given-names: Hugo + family-names: Tavares + affiliation: Cambridge Centre for Research Informatics Training + orcid: 'https://orcid.org/0000-0001-9373-2726' + - given-names: Bajuna + family-names: Salehe + affiliation: Cambridge Centre for Research Informatics Training + - given-names: Ankit + family-names: Kumar + affiliation: Cambridge Centre for Research Informatics Training + - given-names: Matt + family-names: Castle + affiliation: Cambridge Centre for Research Informatics Training + - name: UKHSA New Variant Assessment Platform + city: London + country: GB + website: >- + https://www.gov.uk/guidance/new-variant-assessment-platform +repository-code: 'https://github.com/cambiotraining/sars-cov-2-genomics' +url: 'https://cambiotraining.github.io/sars-cov-2-genomics/' +license: CC-BY-4.0 +commit: 39ae065607c201b861b3fa17ea133d8345493c4a +date-released: '2024-03-28' \ No newline at end of file diff --git a/index.md b/index.md index 89c54aa..7afdac1 100644 --- a/index.md +++ b/index.md @@ -47,21 +47,21 @@ An elementary knowledge of molecular and viral biology is assumed (concepts such Please cite these materials if: - You adapted or used any of them in your own teaching. -- These materials were useful for your research work. For example, you can cite us in the methods section of your paper: "We carried our analyses based on the recommendations in Tavares et al (2022).". +- These materials were useful for your research work. For example, you can cite us in the methods section of your paper: "We carried our analyses based on the recommendations in Tavares et al. (2022).". You can reference these materials as: -> Tavares H, Salehe B, Kumar A, Castle M & UKHSA New Variant Assessment Platform Team (2022) "cambiotraining/sars-cov-2-genomics: Introduction to Sars-CoV-2 Genomics", https://cambiotraining.github.io/sars-cov-2-genomics +> Tavares H., Salehe B., Kumar A., Castle M., UKHSA New Variant Assessment Platform (2024). SARS Genomic Surveillance URL: https://cambiotraining.github.io/sars-cov-2-genomics/ Or, in BibTeX format: ``` -@Misc{, - author = {Tavares, Hugo and Salehe, Bajuna and Kumar, Ankit and Castle, Matt and UKHSA New Variant Assessment Platform Team}, - title = {cambiotraining/sars-cov-2-genomics: Introduction to Sars-CoV-2 Genomics}, - month = {March}, - year = {2022}, - url = {https://cambiotraining.github.io/sars-cov-2-genomics}, +@misc{YourReferenceHere, +author = {Tavares, Hugo and Salehe, Bajuna and Kumar, Ankit and Castle, Matt and UKHSA New Variant Assessment Platform}, +month = {3}, +title = {SARS Genomic Surveillance}, +url = {https://cambiotraining.github.io/sars-cov-2-genomics/}, +year = {2024} } ``` @@ -74,10 +74,11 @@ The contributing members from University of Cambridge Bioinformatics Training Fa - Bajuna Salehe, Teaching Associate - Ankit Kumar, Teaching Assistant -The UKHSA's NVAP Team members that supported these materials are: +The UKHSA New Variant Assessment Platform team members that supported these materials are: -- Dr Leena Inamdar, NVAP Programme Lead and Global Health Lead -- Dr Babak Afrough, Senior Project Manager +- Leena Inamdar, NVAP Programme Lead and Global Health Lead +- Babak Afrough, Senior Project Manager +- Angelika Kritz, Senior Bioinformatician - Aude Wilhelm, Senior Epidemiology Scientist - Richard Myers, Data Analytics Surveillance Head Bioinformatician - Sam Sims, Bioinformatician