Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Extracting BAM on combined contact maps not supported #26

Open
cerebis opened this issue Oct 23, 2019 · 0 comments
Open

Extracting BAM on combined contact maps not supported #26

cerebis opened this issue Oct 23, 2019 · 0 comments
Labels
bug Something isn't working low priority

Comments

@cerebis
Copy link
Owner

cerebis commented Oct 23, 2019

Currently bin3C extract assumes that a single BAM file backs the contact map instance. When bin3C combine is used to merge maps made from separate bin3C mkmap calls, this is no longer true.

This logic would not be difficult to change.
@cerebis cerebis added bug Something isn't working low priority labels Oct 23, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working low priority
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@cerebis