From f1cc15bf713769e66117c01550d3bd03dc02935e Mon Sep 17 00:00:00 2001 From: Tharos Date: Thu, 30 Nov 2023 11:03:32 +0100 Subject: [PATCH] Quartz sync: Nov 30, 2023, 11:03 AM --- content/Working with graphs/Tools/gfafix.md | 15 ++++++++++++++- quartz.layout.ts | 7 +------ 2 files changed, 15 insertions(+), 7 deletions(-) diff --git a/content/Working with graphs/Tools/gfafix.md b/content/Working with graphs/Tools/gfafix.md index d71dfbac48c00..96af0854083e6 100644 --- a/content/Working with graphs/Tools/gfafix.md +++ b/content/Working with graphs/Tools/gfafix.md @@ -1,7 +1,20 @@ --- title: GFAffix --- -Tool is referenced [here](https://github.com/marschall-lab/GFAffix) +Tool is referenced [here](https://github.com/marschall-lab/GFAffix). It aims to compress shared sequences that are distributed along multiple paths where one path should not change + +# Installation +Requires rust, and is available through conda. + +```bash +conda create .env-gfaffix +conda activate .env-gfaffx + +conda install -c conda-forge rust +conda install -c bioconda gfaffix + +conda deactivate +``` To run GFAffix, the command is: `gfaffix -o `. diff --git a/quartz.layout.ts b/quartz.layout.ts index 8b6edd8f80a16..208c106e5816a 100644 --- a/quartz.layout.ts +++ b/quartz.layout.ts @@ -5,12 +5,7 @@ import * as Component from "./quartz/components" export const sharedPageComponents: SharedLayout = { head: Component.Head(), header: [], - footer: Component.Footer({ - links: { - GitHub: "https://github.com/jackyzha0/quartz", - "Discord Community": "https://discord.gg/cRFFHYye7t", - }, - }), + footer: Component.Footer(), } // components for pages that display a single page (e.g. a single note)