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environment.yml
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name: chestXSeg
channels:
- simpleitk
- anaconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- backcall=0.2.0=pyh9f0ad1d_0
- backports=1.0=py_2
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- ca-certificates=2021.10.8=ha878542_0
- cudatoolkit=10.2.89=hfd86e86_1
- cudnn=7.6.5=cuda10.2_0
- debugpy=1.4.1=py38h709712a_0
- decorator=5.1.0=pyhd8ed1ab_0
- entrypoints=0.3=pyhd8ed1ab_1003
- ipykernel=6.8.0=py38he5a9106_0
- ipython=7.27.0=py38he5a9106_0
- ipython_genutils=0.2.0=py_1
- jedi=0.18.0=py38h578d9bd_2
- jpeg=9e=h7f98852_0
- jupyter_client=7.0.2=pyhd8ed1ab_0
- jupyter_core=4.7.1=py38h578d9bd_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- libffi=3.3=h58526e2_2
- libgcc-ng=11.1.0=hc902ee8_8
- libgomp=11.1.0=hc902ee8_8
- libpng=1.6.37=h21135ba_2
- libsodium=1.0.18=h36c2ea0_1
- libstdcxx-ng=11.1.0=h56837e0_8
- libtiff=4.2.0=h85742a9_0
- libwebp-base=1.2.2=h7f98852_1
- lz4-c=1.9.3=h9c3ff4c_1
- matplotlib-inline=0.1.3=pyhd8ed1ab_0
- ncurses=6.2=h58526e2_4
- nest-asyncio=1.5.1=pyhd8ed1ab_0
- openssl=1.1.1l=h7f98852_0
- parso=0.8.2=pyhd8ed1ab_0
- pexpect=4.8.0=pyh9f0ad1d_2
- pickleshare=0.7.5=py_1003
- pip=21.2.4=pyhd8ed1ab_0
- prompt-toolkit=3.0.20=pyha770c72_0
- ptyprocess=0.7.0=pyhd3deb0d_0
- pygments=2.10.0=pyhd8ed1ab_0
- python=3.8.10=h49503c6_1_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.8=2_cp38
- pyzmq=22.2.1=py38h2035c66_0
- readline=8.1=h46c0cb4_0
- setuptools=58.0.4=py38h578d9bd_0
- simpleitk=2.1.1=py38h3fd9d12_0
- six=1.15.0=py_0
- sqlite=3.36.0=h9cd32fc_1
- tk=8.6.11=h27826a3_1
- tornado=6.1=py38h497a2fe_1
- traitlets=5.1.0=pyhd8ed1ab_0
- wcwidth=0.2.5=pyh9f0ad1d_2
- wheel=0.37.0=pyhd8ed1ab_1
- xz=5.2.5=h516909a_1
- zeromq=4.3.4=h9c3ff4c_1
- zlib=1.2.11=h516909a_1010
- zstd=1.4.9=ha95c52a_0
- pip:
- absl-py==0.13.0
- astunparse==1.6.3
- cachetools==4.2.2
- certifi==2021.5.30
- charset-normalizer==2.0.4
- clang==5.0
- classification-models-3d==1.0.2
- click==8.0.4
- cycler==0.10.0
- docker-pycreds==0.4.0
- efficientnet-3d==1.0.1
- flatbuffers==1.12
- gast==0.3.3
- gitdb==4.0.9
- gitpython==3.1.27
- google-auth==1.35.0
- google-auth-oauthlib==0.4.6
- google-pasta==0.2.0
- grpcio==1.40.0
- h5py==2.10.0
- idna==3.2
- imageio==2.9.0
- joblib==1.0.1
- keras==2.6.0
- keras-applications==1.0.8
- keras-preprocessing==1.1.2
- kiwisolver==1.3.2
- markdown==3.3.4
- matplotlib==3.4.3
- networkx==2.6.3
- numpy==1.19.5
- oauthlib==3.1.1
- opencv-python==4.5.3.56
- opt-einsum==3.3.0
- pandas==1.4.0
- patchify==0.2.3
- pathtools==0.1.2
- pillow==8.3.2
- promise==2.3
- protobuf==3.17.3
- psutil==5.9.0
- pyasn1==0.4.8
- pyasn1-modules==0.2.8
- pynrrd==0.4.2
- pyparsing==2.4.7
- pytz==2021.3
- pywavelets==1.1.1
- pyyaml==6.0
- requests==2.26.0
- requests-oauthlib==1.3.0
- rsa==4.7.2
- scikit-image==0.18.3
- scikit-learn==0.24.2
- scipy==1.4.1
- segmentation-models-3d==1.0.1
- sentry-sdk==1.5.5
- shortuuid==1.0.8
- smmap==5.0.0
- tensorboard==2.2.2
- tensorboard-data-server==0.6.1
- tensorboard-plugin-wit==1.8.0
- tensorflow-estimator==2.2.0
- tensorflow-gpu==2.2.0
- termcolor==1.1.0
- threadpoolctl==2.2.0
- tifffile==2021.8.30
- typing-extensions==3.7.4.3
- urllib3==1.26.6
- wandb==0.12.10
- werkzeug==2.0.1
- wrapt==1.12.1
- yaspin==2.1.0
prefix: /home/erattakulangara/.conda/envs/chestXSeg