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ro-crate-metadata.json
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{ "@context": "https://w3id.org/ro/crate/1.1/context",
"@graph": [
{
"@type": "CreativeWork",
"@id": "ro-crate-metadata.json",
"conformsTo": {"@id": "https://w3id.org/ro/crate/1.1"},
"about": {"@id": "./"}
},
{
"@id": "./",
"@type": "Dataset",
"identifier": "https://doi.org/10.1093/bioinformatics/btp163",
"name" : "MetaGoFlow sequence data results for sample EMOBON00001",
"description" : "This is the RO-Crate for the MetaGOflow analysis results of EMO BON sample XXXX",
"datePublished": "2022-11-02",
"license": {"@id": "Creative Commons (CC-BY 4.0)"},
"publisher": {"@id": "https://ror.org/0038zss60"},
"hasPart": [
{"@id": "https://fake.build/net-http.html"},
{"@id": "merged-sequences/"},
{"@id": "fastp.html"},
{"@id": "qc_summary"}
]
},
{
"@id": "https://ror.org/0038zss60",
"@type": "Organization",
"name": "European Marine Biological Resource Centre",
"url": "https://ror.org/0038zss60",
"contactPoint": {"@id": "mailto:help@embrc.org"}
},
{
"@id": "mailto:help@embrc.org",
"@type": "ContactPoint",
"contactType": "Help Desk",
"email": "help@embrc.org",
"identifier": "help@embrc.org",
"url": "https://www.embrc.eu/about-us/contact-us"
},
{
"@id": "https://creativecommons.org/licenses/by/4.0",
"@type": "CreativeWork",
"identifier": "https://creativecommons.org/licenses/by/4.0",
"name": "Creative Commons (CC-BY 4.0)"
},
{
"@id": "https://fake.build/net-http.html",
"@type": "File",
"name": "Sample Metadata RO-Crate",
"description": "Sample metadata",
"encodingFormat": "application/zip"
},
{
"@id": "merged-sequences/",
"@type": "Dataset",
"name": "MetaGOflow merged sequences for sample EMOBON00001",
"description": "Merged and filered sequence results from the execution of MetaGOflow.",
"hasPart": [
{"id@": "wgs-paired-SRR1620013.merged.fasta"},
{"id@": "wgs-paired-SRR1620013.merged_CDS.ffn"},
{"id@": "wgs-paired-SRR1620013.merged_CDS.faa"}
]
},
{
"@id": "wgs-paired-SRR1620013.merged.fasta",
"@type": "File",
"name": "Merged and trimmed sequences in FASTA format",
"encodingFormat": "text/plain"
},
{
"@id": "wgs-paired-SRR1620013.merged_CDS.ffn",
"@type": "File",
"name": "Gene coding nucleotide sequences (CDS) in FASTA format",
"encodingFormat": "text/plain"
},
{
"@id": "wgs-paired-SRR1620013.merged_CDS.faa",
"@type": "File",
"name": "Protein coding amino-acid sequences in FASTA format",
"encodingFormat": "text/plain"
},
{
"@id": "fastp.html",
"@type": "File",
"name": "FASTP summary analysis of reads in HTML format",
"encodingFormat": "text/html"
},
{
"@id": "qc_summary",
"@type": "File",
"name": "Summary of quality control of data.",
"encodingFormat": "text/plain"
}
]
}