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workflow run
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@bulricht @github-actions
bulricht authored and github-actions[bot] committed Oct 18, 2023
1 parent 5c296cd commit e09dd89
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Showing 11 changed files with 795 additions and 1,933 deletions.
1,156 changes: 18 additions & 1,138 deletions data-quality-control/dqc.csv
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4 changes: 2 additions & 2 deletions data-quality-control/logfile
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ERROR:py_data_rules.rule_engine:rule evaluation failed for arr_date_hq_after_ship_date with exception ValueError: time data 'to_arrive_' does not match format '%Y-%m-%d'
ERROR:py_data_rules.rule_engine:rule evaluation failed for ship_date_after_samp_store_date with exception ValueError: time data 'to_arrive_' does not match format '%Y-%m-%d'
ERROR:py_data_rules.rule_engine:rule evaluation failed for arr_date_hq_after_ship_date with exception ValueError: time data 'to_ship_Se' does not match format '%Y-%m-%d'
ERROR:py_data_rules.rule_engine:rule evaluation failed for ship_date_after_samp_store_date with exception ValueError: time data 'to_ship_Se' does not match format '%Y-%m-%d'
18 changes: 0 additions & 18 deletions data-quality-control/report.csv
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Expand Up @@ -74,12 +74,6 @@ missing value,sediment,sampling,ENA_accession_number_sample,123,<empty>,\,/githu
missing value,sediment,sampling,ENA_accession_number_sample,124,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDAnyURI,mandatory
missing value,sediment,sampling,ENA_accession_number_sample,129,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDAnyURI,mandatory
missing value,sediment,sampling,ENA_accession_number_sample,130,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDAnyURI,mandatory
missing value,sediment,sampling,arr_date_hq,89,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_hq,90,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_hq,118,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_hq,119,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_hq,129,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_hq,130,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_seq,23,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_seq,24,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,arr_date_seq,52,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
Expand Down Expand Up @@ -143,18 +137,6 @@ missing value,sediment,sampling,depth,130,<empty>,\,/github/workspace/logsheets-
missing value,sediment,sampling,depth,131,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,EMOBONList,mandatory
missing value,sediment,sampling,depth,132,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,EMOBONList,mandatory
missing value,sediment,sampling,depth,133,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,EMOBONList,mandatory
datatype mismatch,sediment,sampling,ship_date,84,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,85,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,89,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,90,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,113,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,114,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,118,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,119,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,123,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,124,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,129,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
datatype mismatch,sediment,sampling,ship_date,130,to_arrive_Sep_2023,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,ship_date_seq,23,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,ship_date_seq,24,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
missing value,sediment,sampling,ship_date_seq,52,<empty>,\,/github/workspace/logsheets-filtered/sediment_sampling.csv,XSDDate,mandatory
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