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Remove cmdstanr remote dependency #147

Closed
Tracked by #236
athowes opened this issue Jul 11, 2024 · 4 comments · Fixed by #356
Closed
Tracked by #236

Remove cmdstanr remote dependency #147

athowes opened this issue Jul 11, 2024 · 4 comments · Fixed by #356
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infrastructure

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@athowes
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athowes commented Jul 11, 2024

See #143. Eventually we should try to rely on a stable version of cmdstanr. This would be required for this package to be on CRAN. One way to achieve this is via additional repos argument in DESCRIPTION.
@athowes athowes mentioned this issue Jul 11, 2024
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@seabbs
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seabbs commented Jul 11, 2024

One way to achieve this is via additional repos argument in DESCRIPTION

We can do this now without waiting for it to be on CRAN

@athowes athowes mentioned this issue Aug 9, 2024
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@athowes athowes added the medium label Aug 9, 2024
@seabbs seabbs added high and removed medium labels Sep 20, 2024
@athowes athowes mentioned this issue Oct 1, 2024
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@athowes
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athowes commented Oct 1, 2024

So far I am just trying:

Additional_repositories:
    https://github.com/stan-dev/cmdstanr/releases

Looking through GitHub I didn't find instances of use of Additional_repositories with R universe which is what I had been trying to do before (https://stan-dev.r-universe.dev/cmdstanr).

See r-lib/remotes#618.

@athowes
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athowes commented Oct 1, 2024

The solution (I think) was to use same approach as primarycensoreddist.

Also I am trying to move cmdstanr from Imports to Suggests.

@athowes
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athowes commented Oct 1, 2024

Need to change default away backend = "cmdstanr"

seabbs pushed a commit that referenced this issue Oct 2, 2024
@athowes
Issue #147: Remove cmdstanr from remote (#356)
6ee9839 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package
seabbs pushed a commit that referenced this issue Jan 10, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
6828a8f 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 82a8496410e085d1473884d2053aeeaf6098f881 [formerly 0ea27be8098a9c67d003a259a5667e55c9ce2af3]
Former-commit-id: 19a0530e82757681e05176ba39546e99b3b85ec1
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
b6d761e 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 6ee9839
Former-commit-id: 7d9b5e32d8be79d554b92b7f7b7bdaa3f07eeddf
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
b2e8f6e 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 6ee9839
Former-commit-id: 7d9b5e32d8be79d554b92b7f7b7bdaa3f07eeddf
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
5d1af31 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 6ee9839
Former-commit-id: 7d9b5e32d8be79d554b92b7f7b7bdaa3f07eeddf
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
88f0953 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 82a8496410e085d1473884d2053aeeaf6098f881 [formerly 0ea27be8098a9c67d003a259a5667e55c9ce2af3]
Former-commit-id: 19a0530e82757681e05176ba39546e99b3b85ec1
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
f30c19f 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 82a8496410e085d1473884d2053aeeaf6098f881 [formerly 0ea27be8098a9c67d003a259a5667e55c9ce2af3]
Former-commit-id: 19a0530e82757681e05176ba39546e99b3b85ec1
Former-commit-id: 88f0953
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
5c17a9d 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 6ee9839
Former-commit-id: 7d9b5e32d8be79d554b92b7f7b7bdaa3f07eeddf
Former-commit-id: bde4c96ef6c5a1db1f33a65eee29cbe8a987f296 [formerly 5d1af31]
Former-commit-id: a4407652c81af30af0071da5568ea77bd0e8478c
seabbs pushed a commit that referenced this issue Jan 21, 2025
@athowes
Issue #147: Remove cmdstanr from remote (#356)
c2b8d00 
* Remove cmdstanr from Remotes

* Move into Additional_repositories

* Use stable release version rather than latest

* Use R universe version of cmdstanr and add to GH actions

* Move cmdstanr from Imports to Suggests

* Remove import statement in package

Former-commit-id: 6ee9839
Former-commit-id: 7d9b5e32d8be79d554b92b7f7b7bdaa3f07eeddf
Former-commit-id: bde4c96ef6c5a1db1f33a65eee29cbe8a987f296 [formerly 5d1af31]
Former-commit-id: a4407652c81af30af0071da5568ea77bd0e8478c
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Issue #147: Remove cmdstanr from remote epinowcast/epidist
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@seabbs @athowes