Create function use flowchart

[athowes]

Use mermaid to show suggested path through use of functions in package:

  graph TD;
      A-->B;
      A-->C;
      B-->D;
      C-->D;

Loading

See example in https://github.com/CDCgov/Rt-without-renewal/tree/main/EpiAware#current-epiaware-model-diagram.

[athowes]

can use this or similar to see functions call each other: https://cran.r-project.org/web/packages/CodeDepends/vignettes/intro.html

[seabbs]

Note that what this won't do is build the flow diagram of how user facing functions should be used together (i.e it just does what calls what) which means it is a slightly different (but still useful) thing.

[athowes]

Here's the static analysis:

[seabbs]

My TLDR from this is that most of the package is user facing with users expected to glue functions together (which is no bad thing IMO) and that most of the internal code is in data setup/preprocessing