README.md

按照lane拆分

dragen --bcl-conversion-only true --bcl-input-directory ${1} --output-directory ${2} --force --sample-sheet  ${3}

非按lane拆分

dragen --bcl-conversion-only true --bcl-input-directory ${1} --output-directory ${2} --force --sample-sheet  ${3} --no-lane-splitting true

数据拆分输出压缩格式ora文件

1.压缩参考基因组

Illumina ORA Compression Reference Files:

https://sapac.support.illumina.com/sequencing/sequencing_software/dragen-bio-it-platform/product_files.html

2.命令行参数

--ora-reference=/staging/lenadata/ --fastq-compression-format=dragen