export

fenke · Jul 5, 2024 · 725a968 · 725a968
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commit 725a968
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Showing 4 changed files with 21 additions and 33 deletions.
diff --git a/corebridge/rscript.py b/corebridge/rscript.py
@@ -0,0 +1,13 @@
+# AUTOGENERATED! DO NOT EDIT! File to edit: ../nbs/02_rscriptbridge.ipynb.
+
+# %% auto 0
+__all__ = []
+
+# %% ../nbs/02_rscriptbridge.ipynb 3
+import json, os
+import subprocess
+import warnings
+
+from functools import reduce
+
+
diff --git a/nbs/01_aicorebridge.ipynb b/nbs/01_aicorebridge.ipynb
@@ -37,7 +37,7 @@
    "outputs": [],
    "source": [
     "#| hide\n",
-    "addroot.sys.path.append(addroot.os.path.join(addroot.project_root, 'corebridge'))"
+    "#addroot.sys.path.append(addroot.os.path.join(addroot.project_root, 'corebridge'))"
    ]
   },
   {
@@ -822,7 +822,7 @@
       "]\n",
       "Result Message\n",
       " [\n",
-      "  \"Startup time: 2024-06-27T07:39:55.974705+00:00\",\n",
+      "  \"Startup time: 2024-07-05T07:59:40.492169+00:00\",\n",
       "  \"test_function((data: pandas.core.frame.DataFrame, anumber: float | numpy.ndarray = 0))\",\n",
       "  \"init_args: (1, 2), init_kwargs: {'num_1': 3, 'num_2': 4, 'assets_dir': None, 'save_dir': '/home/fenke/repos/corebridge/nbs/cache'}\",\n",
       "  \"lastSeen: False, recordformat: records, timezone: Europe/Amsterdam\",\n",
@@ -931,7 +931,7 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "Loading corebridge.aicorebridge 0.2.14 from /home/fenke/repos/corebridge/corebridge/aicorebridge.py\n"
+      "Loading corebridge.aicorebridge 0.2.15 from /home/fenke/repos/corebridge/corebridge/aicorebridge.py\n"
      ]
     }
    ],
@@ -981,7 +981,7 @@
       "]\n",
       "Result Message\n",
       " [\n",
-      "  \"Startup time: 2024-06-27T07:39:56.067780+00:00\",\n",
+      "  \"Startup time: 2024-07-05T07:59:40.611130+00:00\",\n",
       "  \"test_function((data: pandas.core.frame.DataFrame, anumber: float | numpy.ndarray = 0))\",\n",
       "  \"init_args: (1, 2), init_kwargs: {'num_1': 3, 'num_2': 4, 'assets_dir': None, 'save_dir': '/home/fenke/repos/corebridge/nbs/cache'}\",\n",
       "  \"lastSeen: False, recordformat: records, timezone: Europe/Amsterdam\",\n",

diff --git a/nbs/02_rscriptbridge.ipynb b/nbs/02_rscriptbridge.ipynb
@@ -856,7 +856,7 @@
     "\n",
     "if md5_check_result.returncode:\n",
     "    run_script_result = subprocess.run(\n",
-    "        ['Rscript', '--vanilla', os.path.join(assets_dir, script_name)],\n",
+    "        ['Rscript', '--vanilla', get_asset_path(script_name)],\n",
     "        cwd=save_dir,\n",
     "        capture_output=True\n",
     "    )\n",

diff --git a/nbs/index.ipynb b/nbs/index.ipynb
@@ -176,27 +176,8 @@
     "\n",
     "    nbdev_install_quarto\n",
     "\n",
-    "But this ask for the system admin password.\n"
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
+    "But this ask for the system admin password.\n",
+    "\n",
     "\n",
     "### Local editing & testing\n",
     "\n",
@@ -212,13 +193,7 @@
     "```\n",
     "    pip install -e .[dev]\n",
     "\n",
-    "```"
-   ]
-  },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
+    "```\n",
     "### nbdev cycle\n",
     "\n",
     "- edit\n",