add back pkgdown build

* was removed by 1a9f371

.github/workflows/R-CMD-check.yaml

@@ -39,7 +39,7 @@ jobs:
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
           extra-packages: any::rcmdcheck, any::pkgdown, catmaid=natverse/rcatmaid
-          needs: check, website
+          needs: check
 
       - name: Fix Conda permissions on macOS
         if: runner.os == 'macOS'

.github/workflows/pkgdown.yaml

@@ -0,0 +1,60 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
+  release:
+    types: [published]
+  workflow_dispatch:
+
+name: pkgdown
+
+permissions: read-all
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, catmaid=natverse/rcatmaid, local::.
+          needs: website
+
+      - name: Install fafbseg + python
+        run: |
+          pak::local_install()
+          library(fafbseg)
+          simple_python(pkgs = 'fafbseg')
+          # simple_python('none', pkgs = 'caveclient==5.15.2')
+          # simple_python('none', pkgs = 'pyarrow==12.0.1')
+          dr_fafbseg()
+        shell: Rscript {0}
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4.5.0
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs

DESCRIPTION

@@ -12,7 +12,7 @@ Description: Access to the FANC EM dataset, focussing on support for
     autosegmentation. Organised as a thin wrapper around the fafbseg
     package.
 License: GPL-3
-URL: https://github.com/flyconnectome/fancr
+URL: https://github.com/flyconnectome/fancr, https://flyconnectome.github.io/fancr/
 BugReports: https://github.com/flyconnectome/fancr/issues
 Depends: 
     R (>= 2.10),

_pkgdown.yml

@@ -1,4 +1,4 @@
-url: https://flyconnectome.github.io/fancr
+url: https://flyconnectome.github.io/fancr/
 navbar:
   structure:
     left:
@@ -24,8 +24,9 @@ navbar:
       href: https://github.com/flyconnectome/fancr/
     natverse:
       text: natverse
-      href: https://natverse.github.io
+      href: https://natverse.org
     help:
       text: Help
       href: SUPPORT.html
-
+template:
+  bootstrap: 5