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I tried to install topiary through conda (https://topiary-asr.readthedocs.io/en/latest/installation.html), and no error seemed to occur. When I ran "topiary-check-installed", I got the following error message: Traceback (most recent call last): File "/home/chen.zhao/.local/bin/topiary-check-installed", line 6, in <module> import topiary File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/__init__.py", line 33, in <module> from . import util File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/util/__init__.py", line 5, in <module> from .create_nicknames import create_nicknames File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/util/create_nicknames.py", line 7, in <module> from topiary.io.paralog_patterns import load_paralog_patterns File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/io/__init__.py", line 7, in <module> from .alignments import write_fasta File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/io/alignments.py", line 7, in <module> from topiary.opentree.util import sort_df_by_taxa File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/opentree/__init__.py", line 5, in <module> from .util import species_to_ott File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/opentree/util.py", line 8, in <module> import opentree ModuleNotFoundError: No module named 'opentree'
Any idea about the solution? I really appreciate it!
Best,
Chen
The text was updated successfully, but these errors were encountered:
I tried to install topiary through conda (https://topiary-asr.readthedocs.io/en/latest/installation.html), and no error seemed to occur. When I ran "topiary-check-installed", I got the following error message:
Traceback (most recent call last): File "/home/chen.zhao/.local/bin/topiary-check-installed", line 6, in <module> import topiary File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/__init__.py", line 33, in <module> from . import util File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/util/__init__.py", line 5, in <module> from .create_nicknames import create_nicknames File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/util/create_nicknames.py", line 7, in <module> from topiary.io.paralog_patterns import load_paralog_patterns File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/io/__init__.py", line 7, in <module> from .alignments import write_fasta File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/io/alignments.py", line 7, in <module> from topiary.opentree.util import sort_df_by_taxa File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/opentree/__init__.py", line 5, in <module> from .util import species_to_ott File "/home/chen.zhao/.local/lib/python3.10/site-packages/topiary/opentree/util.py", line 8, in <module> import opentree ModuleNotFoundError: No module named 'opentree'
Any idea about the solution? I really appreciate it!
Best,
Chen
The text was updated successfully, but these errors were encountered: