-
Notifications
You must be signed in to change notification settings - Fork 19
Arabidopsis Plant Care
Erin was in charge of planting and tending to the Arabidopsis plants, which were used for floral dips and protoplast formation. She planted a new batch of Arabidopsis seeds every two weeks; this staggered growth ensured that different growth stages of the plant were present, allowing for longer construction time of the pCAMBIA/Cas9 plasmid. The plants were too eager to grow in several cases, so their primary shoots had to be trimmed to delay growth – this gave the team an extra ~7 days for construction and preparation of the transformed Agrobacterium cells. After the floral dip, the transgenic seeds were harvested and planted. However, as plants have extensive growth periods, it will take another month until they are ready for viral exposure.
Project
Description
Results
Design
Requirements
Lab & Design Documentation
Measurement Interlab Study
sgRNA Swap
Target Plasmid Construction
Gibson Assembly of pCAMBIA
Math Modelling
Cauliflower Mosaic Virus (CaMV)
CaMV Spread within Arabidopsis
CRISPR/Cas9 Targeting
Modelling Viral Assembly
Modelling Viral Spread
Bioinformatics/Coding
Coding Guide
Designing sgRNA Targets for CaMV Immunity
PyMOL/PyRosetta for Windows
PyMOL/PyRosetta for Linux
PyMOL/PyRosetta for Mac
Modelling Resources
Modelling Cas9 in PyRosetta
Building PyRosetta from Source
PyRosetta Fold Tree
ABM Software Comparison
Policy & Practices
Survey Information
[Local Agriculture Outreach and Acquiring Virus Testing Facility]([Local Agriculture Outreach and Acquiring Virus Testing Facility](Local Agriculture Outreach and Acquiring Virus Testing Facility))
Teamwide Documentation
Q & A
What does this paper mean?
Outreach
Collaboration
Sponsors