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Issues list

BUG: Windows unit tests are failing
#1052 opened May 28, 2025 by asoplata
BUG: MPI forces maximum limit on drive number (and possibly network complexity) bug Something isn't working parallelization Parallel processing
#1050 opened May 20, 2025 by asoplata
GUI: Sync y-axes of PSD Layers plotting hnn-gui HNN GUI
#1049 opened May 7, 2025 by asoplata
INSTALL: Investigate Windows WSL install, including MPI installation
#1041 opened Apr 9, 2025 by asoplata
@asoplata
1
DOC: Optimize notebooks require MPI & opt install, but this is not stated
#1040 opened Apr 8, 2025 by asoplata
SCI: For Alpha/Beta, L2 no longer shows stronger beta than L5 science visualization
#1039 opened Apr 6, 2025 by asoplata
MAINT: Decrease frequency of running Linkcheck
#1031 opened Mar 31, 2025 by asoplata
1
FEAT: Add GUI parameter-table export and diff enhancement New feature or request hnn-gui HNN GUI
#1005 opened Mar 3, 2025 by asoplata
4 tasks
0.5
@asoplata
6
BUG: Recording cellular data from MPI simulations is significantly slower than non-MPI bug Something isn't working parallelization Parallel processing
#999 opened Feb 21, 2025 by asoplata
Hard-coded baseline correction
#997 opened Feb 14, 2025 by katduecker
Hard-coded initial membrane potentials
#996 opened Feb 14, 2025 by katduecker
DOCS: Fix inconsistencies in existing parameter docstrings docs Documentation and tutorials good first issue Good for newcomers
#995 opened Feb 13, 2025 by asoplata
2
DOCS: Add/Expand docstrings of all functions with arguments docs Documentation and tutorials good first issue Good for newcomers
#993 opened Feb 10, 2025 by asoplata
DOCS: Check spelling in docstrings docs Documentation and tutorials good first issue Good for newcomers
#990 opened Feb 3, 2025 by asoplata
3
METRICS: Build an automatic metrics analytics pipeline
#984 opened Jan 29, 2025 by asoplata
3 tasks
ENH/REF: Feature planning: Removing celltype hardcoding enhancement New feature or request refactor
#972 opened Jan 21, 2025 by asoplata
10 tasks
0.5
1
DOC: Refresh code-website docs Documentation and tutorials maint Maintenance website
#969 opened Jan 14, 2025 by asoplata
3 of 22 tasks
@asoplata
MODEL: Adjust cell spacing default-model-update Issues applicable to the subsequent iteration of the default HNN network model science
#968 opened Jan 14, 2025 by asoplata
1
2
ENH/VIZ: Add visualization of strength of drives to each celltype enhancement New feature or request visualization
#967 opened Jan 14, 2025 by asoplata
9
ENH/VIZ: Introduce visualization of “currentscape” blocked/cannot proceed enhancement New feature or request visualization
#966 opened Jan 14, 2025 by asoplata
9
REF: Introduce typing and type hints docs Documentation and tutorials enhancement New feature or request maint Maintenance refactor testing
#965 opened Jan 10, 2025 by asoplata 0.5
3
REF: Refactor bias handling enhancement New feature or request maint Maintenance refactor
#963 opened Jan 10, 2025 by asoplata
4 tasks
0.5
2
MAINT: Upgrade ALL network configuration file formats (except for tests) file-formats high difficulty maint Maintenance refactor testing
#962 opened Jan 10, 2025 by asoplata 0.5
@asoplata
9
BUG: Network jones2009_3x3_drives.json is incompatible with MPI bug Something isn't working hnn-gui HNN GUI testing
#960 opened Dec 13, 2024 by asoplata
2 tasks
@asoplata
1
BUG: Re-evaluate BatchSimulate backends parallelization Parallel processing testing
#955 opened Nov 26, 2024 by asoplata
4 tasks
0.5
1
6
ProTip! Updated in the last three days: updated:>2025-05-28.