DESCRIPTION

Package: BioSeqUtils
Title: Extract Sequence of Different Features From Annotation and Genome File
Version: 0.0.9
Maintainer: Jun Zhang <3219030654@stu.cpu.edu.cn>
Authors@R: 
    person("Jun", "Zhang", , "3219030654@stu.cpu.edu.cn", role = c("aut", "cre"),
           comment = c(ORCID = "YOUR-ORCID-ID"))
Description: For Extracting multiple different features sequence of gene, here supply 
  a way to get the sequence like exon,5UTR,3UTR,CDS,intron from your own local GTF/GFF
  annotation file and genome file. Track visualization is good choice for this package.
  Other useful functions are implemented.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports: 
    Biostrings,
    data.table,
    DescTools,
    dplyr,
    fastplyr,
    furrr,
    GenomicRanges,
    ggbio,
    ggh4x,
    ggnewscale,
    ggplot2,
    ggrepel,
    HiCcompare,
    jjAnno,
    jjPlot,
    magrittr,
    megadepth,
    methods,
    plotgardener,
    plyr,
    plyranges,
    progress,
    purrr,
    RColorBrewer,
    reticulate,
    rhdf5,
    rtracklayer,
    scales,
    tibble,
    tidyr,
    utils,
    zplyr
Remotes:
  burchill/zplyr,
  junjunlab/jjAnno,
  junjunlab/jjPlot
biocViews: Biostrings,GenomicRanges,rtracklayer,plotgardener,megadepth,ggbio
Depends: 
    R (>= 2.10)
LazyData: true