Commit 80af682 1 parent d9f0e84 commit 80af682 Copy full SHA for 80af682
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lines changed Original file line number Diff line number Diff line change @@ -20,6 +20,7 @@ Imports:
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tidyverse
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Suggests:
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rmarkdown,
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+ markdown,
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knitr
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Remotes:
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ropensci/targets,
Original file line number Diff line number Diff line change @@ -29,12 +29,14 @@ COPASI models can be found in `data/copasi_models`.
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Figures are generated reproducibly in R using [ ` renv ` ] ( https://rstudio.github.io/renv/index.html ) and [ ` targets ` ] ( https://docs.ropensci.org/targets/ ) :
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- 1 . Run
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+ 1 . Download/clone this repository
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+ 2 . Open the project file (` .Rproj ` ) in RStudio
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+ 3 . Run
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``` {r, eval=F}
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renv::restore()
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```
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to install R package dependencies.
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- 2 . Open ` targets.Rmd ` in RStudio and choose * Run* > * Run All* . Figures will appear in the ` output ` folder.
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+ 4 . Open ` targets.Rmd ` and choose * Run* > * Run All* . Figures will appear in the ` output ` folder.
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---
Original file line number Diff line number Diff line change @@ -23,16 +23,20 @@ Figures are generated reproducibly in R using
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[ ` renv ` ] ( https://rstudio.github.io/renv/index.html ) and
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[ ` targets ` ] ( https://docs.ropensci.org/targets/ ) :
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- 1 . Run
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+ 1 . Download/clone this repository
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+
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+ 2 . Open the project file (` .Rproj ` ) in RStudio
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+
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+ 3 . Run
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``` r
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renv :: restore()
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```
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to install R package dependencies.
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- 2 . Open `targets.Rmd` in RStudio and choose * Run * > * Run All * . Figures
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- will appear in the `output` folder.
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+ 4 . Open `targets.Rmd` and choose * Run * > * Run All * . Figures will appear
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+ in the `output` folder.
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------------------------------------------------------------------------
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