DESCRIPTION

Package: derfinder
Type: Package
Title: Differential expression analysis of RNA-seq data at base-pair resolution
Version: 1.0.2
Date: 2013-06-19
Authors@R: c(person("Alyssa", "Frazee", role = c("aut", "cre"), email =
    "alyssa.frazee@gmail.com"), person("Leonardo", "Collado-Torres", role = "aut",
    email = "lcollado@jhsph.edu"), person("Jeffrey", "Leek", role = c("aut",
    "ths"), email = "jtleek@gmail.com"))
Depends:
    R(>= 2.15.2),
    Genominator,
    limma,
    HiddenMarkov,
    splines,
    locfdr
Imports:
    IRanges
Suggests:
    GenomicFeatures,
    rtracklayer,
    multicore,
    DNAcopy,
    sva,
    genefilter,
    proto,
    DBI,
    chron,
    gsubfn,
    RSQLite,
    RSQLite.extfuns,
    RPostgreSQL,
    RMySQL,
    RH2,
    Rsamtools,
    BSgenome.Hsapiens.UCSC.hg19,
    BSgenome.Mmusculus.UCSC.mm10
Description: Differential expression analysis of RNA-seq data at base-pair
    resolution
License: MIT + file LICENSE
URL: https://github.com/alyssafrazee/derfinder