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handle lazy loading through .pyi type stubs #12072

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Merged
merged 6 commits into from
Oct 5, 2023
Merged

handle lazy loading through .pyi type stubs #12072

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77925fd
rename dev_reports folder
drammock Oct 4, 2023
e08eba0
add pyi generator script
drammock Oct 4, 2023
2ca16b8
add __init__.pyi files
drammock Oct 4, 2023
f2d7b20
simplify __init__.py files
drammock Oct 4, 2023
aa8681a
update manifest
drammock Oct 4, 2023
a8b89f0
Merge branch 'main' into pyi
larsoner Oct 5, 2023
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1 change: 1 addition & 0 deletions MANIFEST.in
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Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@ recursive-include tutorials *.py
recursive-include tutorials *.txt

recursive-include mne *.py
recursive-include mne *.pyi
recursive-include mne/data *
recursive-include mne/icons *
recursive-include mne/data/helmets *
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275 changes: 1 addition & 274 deletions mne/__init__.py
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Original file line number Diff line number Diff line change
@@ -1,5 +1,4 @@
"""MNE software for MEG and EEG data analysis."""

# PEP0440 compatible formatted version, see:
# https://www.python.org/dev/peps/pep-0440/
#
Expand All @@ -26,279 +25,7 @@
from ._version import __version__
except ImportError:
__version__ = "0.0.0"


__getattr__, __dir__, __all__ = lazy.attach(
__name__,
submodules=[
"beamformer",
"channels",
"chpi",
"commands",
"coreg",
"cuda",
"datasets",
"decoding",
"defaults",
"dipole",
"epochs",
"event",
"export",
"filter",
"forward",
"gui",
"inverse_sparse",
"io",
"minimum_norm",
"preprocessing",
"report",
"source_space",
"simulation",
"stats",
"surface",
"time_frequency",
"viz",
],
submod_attrs={
"_freesurfer": [
"get_volume_labels_from_aseg",
"head_to_mni",
"head_to_mri",
"read_freesurfer_lut",
"read_lta",
"read_talxfm",
"vertex_to_mni",
],
"annotations": [
"Annotations",
"annotations_from_events",
"count_annotations",
"events_from_annotations",
"read_annotations",
],
"bem": [
"make_bem_model",
"make_bem_solution",
"make_sphere_model",
"read_bem_solution",
"read_bem_surfaces",
"write_bem_solution",
"write_bem_surfaces",
"write_head_bem",
],
"channels": [
"equalize_channels",
"rename_channels",
"find_layout",
"read_vectorview_selection",
],
"coreg": [
"create_default_subject",
"scale_bem",
"scale_labels",
"scale_mri",
"scale_source_space",
],
"cov": [
"Covariance",
"compute_covariance",
"compute_raw_covariance",
"make_ad_hoc_cov",
"read_cov",
"whiten_evoked",
"write_cov",
],
"dipole": [
"Dipole",
"DipoleFixed",
"fit_dipole",
"read_dipole",
],
"epochs": [
"BaseEpochs",
"Epochs",
"EpochsArray",
"concatenate_epochs",
"make_fixed_length_epochs",
"read_epochs",
],
"event": [
"AcqParserFIF",
"concatenate_events",
"count_events",
"find_events",
"find_stim_steps",
"make_fixed_length_events",
"merge_events",
"pick_events",
"read_events",
"write_events",
],
"evoked": [
"Evoked",
"EvokedArray",
"combine_evoked",
"read_evokeds",
"write_evokeds",
],
"forward": [
"Forward",
"apply_forward_raw",
"apply_forward",
"average_forward_solutions",
"convert_forward_solution",
"make_field_map",
"make_forward_dipole",
"make_forward_solution",
"read_forward_solution",
"use_coil_def",
"write_forward_solution",
],
"io": [
"read_epochs_fieldtrip",
"read_evoked_besa",
"read_evoked_fieldtrip",
"read_evokeds_mff",
],
"io.base": [
"concatenate_raws",
"match_channel_orders",
],
"io.eeglab": [
"read_epochs_eeglab",
],
"io.kit": [
"read_epochs_kit",
],
"_fiff.meas_info": [
"Info",
"create_info",
],
"_fiff.pick": [
"channel_indices_by_type",
"channel_type",
"pick_channels_cov",
"pick_channels_forward",
"pick_channels_regexp",
"pick_channels",
"pick_info",
"pick_types_forward",
"pick_types",
],
"_fiff.proj": [
"Projection",
],
"_fiff.reference": [
"add_reference_channels",
"set_bipolar_reference",
"set_eeg_reference",
],
"_fiff.what": [
"what",
],
"label": [
"BiHemiLabel",
"grow_labels",
"label_sign_flip",
"Label",
"labels_to_stc",
"morph_labels",
"random_parcellation",
"read_label",
"read_labels_from_annot",
"split_label",
"stc_to_label",
"write_label",
"write_labels_to_annot",
],
"misc": [
"parse_config",
"read_reject_parameters",
],
"morph_map": [
"read_morph_map",
],
"morph": [
"SourceMorph",
"compute_source_morph",
"grade_to_vertices",
"read_source_morph",
],
"proj": [
"compute_proj_epochs",
"compute_proj_evoked",
"compute_proj_raw",
"read_proj",
"sensitivity_map",
"write_proj",
],
"rank": [
"compute_rank",
],
"report": [
"Report",
"open_report",
],
"source_estimate": [
"MixedSourceEstimate",
"MixedVectorSourceEstimate",
"SourceEstimate",
"VectorSourceEstimate",
"VolSourceEstimate",
"VolVectorSourceEstimate",
"extract_label_time_course",
"grade_to_tris",
"read_source_estimate",
"spatial_dist_adjacency",
"spatial_inter_hemi_adjacency",
"spatial_src_adjacency",
"spatial_tris_adjacency",
"spatio_temporal_dist_adjacency",
"spatio_temporal_src_adjacency",
"spatio_temporal_tris_adjacency",
"stc_near_sensors",
],
"source_space._source_space": [
"SourceSpaces",
"add_source_space_distances",
"get_volume_labels_from_src",
"morph_source_spaces",
"read_source_spaces",
"setup_source_space",
"setup_volume_source_space",
"write_source_spaces",
],
"surface": [
"decimate_surface",
"dig_mri_distances",
"get_head_surf",
"get_meg_helmet_surf",
"get_montage_volume_labels",
"read_surface",
"read_tri",
"write_surface",
],
"transforms": [
"Transform",
"read_trans",
"transform_surface_to",
"write_trans",
],
"utils": [
"get_config_path",
"get_config",
"grand_average",
"open_docs",
"set_cache_dir",
"set_config",
"set_memmap_min_size",
"sys_info",
"use_log_level",
"verbose",
],
},
)

(__getattr__, __dir__, __all__) = lazy.attach_stub(__name__, __file__)
# initialize logging
from .utils import set_log_level, set_log_file

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