diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml index 8a656cf..cb22370 100644 --- a/.github/workflows/rworkflows.yml +++ b/.github/workflows/rworkflows.yml @@ -41,7 +41,7 @@ jobs: run_covr: ${{ true }} run_pkgdown: ${{ true }} has_runit: ${{ false }} - GITHUB_TOKEN: ${{ secrets.PAT_GITHUB }} + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} run_docker: ${{ true }} docker_user: bschilder docker_org: neurogenomicslab diff --git a/R/check_peakfiles.R b/R/check_peakfiles.R new file mode 100644 index 0000000..40bc094 --- /dev/null +++ b/R/check_peakfiles.R @@ -0,0 +1,5 @@ +check_peakfiles <- function(peakfiles){ + if(all(unlist(lapply(peakfiles,length))==0)){ + stopper("No peaks found in any of the peakfiles.") + } +} \ No newline at end of file